ID:

dan_2500

 Coordinate:

scaffold_13337:8469202-8469352 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

No conservation details.

-8.5 -8.0 -7.8

Flybase annnotation

exon [dana_GLEANR_10135:2]; CDS [Dana\GF10178-cds]; intron [Dana\GF10178-in]; Antisense to intron [Dana\GF24303-in]

Repeatable elements

NameClassFamilyStrand
AT_richLow_complexityLow_complexity+
AT_richLow_complexityLow_complexity+
AT_richLow_complexityLow_complexity+
mature
star
  1. dan_2500  scaffold_13337:8469319-8469343 +
  2. scaffold_13337:8470583-8470607 +
  3. scaffold_13337:8471847-8471871 +

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
GCCATACAGCCAAAATTTAAATTTAATTGGACTTGGCCGTAACCTTTCTGGTAAGTTTTATTTACAAATTAATTAAAAATAATTAAAAATAATAATTAATTATTTTCAACAATTTCAGATTCAGATTAAGAGGAGAGAAATAAAAAATTTTTATTTTGTAAATTTTGTTAAAGGTGAGTAACATTTTAATTTAAAATTTTTTTTTTTTATTTATAATGTTTTTCATTATTTCAGCCAAACCATGTTGCGAT
*****************************************************************************************************************.....(((((..((((.((((..(((((((((...))))))))).....)))).))))...))))).............*********************************************************** 		Read size # Mismatch Hit Count Total Norm Total M044
female body
 M058
embryo
 V039
embryo
 V105
male body		 V055
head
.....................TTTAATTGGACTTGGCCGTAACC............................................................................................................................................................................................................... 23 0 1 5.00 5 3 2 0 0 0
.....................TTTAATTGGACTTGGCCGTAACCTT............................................................................................................................................................................................................. 25 0 1 2.00 2 2 0 0 0 0
.................................................................................................................TTCAGATTCAGATTAAGAGGAGA................................................................................................................... 23 0 1 1.00 1 0 0 1 0 0
.....................................................................................................................................................................................................................................TTCAGCCAAACCATGTTGCGAT 22 0 1 1.00 1 1 0 0 0 0
...................AATTTAATTGGACTTGGCCGT................................................................................................................................................................................................................... 21 0 1 1.00 1 0 1 0 0 0
.....................TTTAATTGGACTTGGCCGTAACCT.............................................................................................................................................................................................................. 24 0 1 1.00 1 0 1 0 0 0
...............................................................................................................................................................................................................................CATTATTTCAGCCAAACCATGTTG.... 24 0 1 1.00 1 1 0 0 0 0
.........................ATTGGACTTGGCCGTAACCTTT............................................................................................................................................................................................................ 22 0 1 1.00 1 1 0 0 0 0
.................................................................................................................TGCTGATTCAGATTAAGAGGAGAGA................................................................................................................. 25 2 1 1.00 1 0 1 0 0 0
......................TTAATTGGACTTGGCCGTAACCTTTC........................................................................................................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0
........................AATTGGACTTGGCCGTAACCTTT............................................................................................................................................................................................................ 23 0 1 1.00 1 0 1 0 0 0
.................................................................................................................................................................................................................................TTATTTCAGCCAAACCATGTTGC... 23 0 1 1.00 1 0 1 0 0 0
.........................ATTGGACTTGGCCGTAACCTT............................................................................................................................................................................................................. 21 0 1 1.00 1 1 0 0 0 0
.................TAAATTTAATTGGACTTGGCCGTAAC................................................................................................................................................................................................................ 26 0 1 1.00 1 0 1 0 0 0
.....................TTTAATTGGACTTGGCCGTAACCTTTCTG......................................................................................................................................................................................................... 29 0 1 1.00 1 1 0 0 0 0
...............................................................................................................ATTTCAGATTCAGATTAAGAGGAGA................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0
........................AATTGGACTTGGCCGTAACC............................................................................................................................................................................................................... 20 0 1 1.00 1 0 1 0 0 0
...............................................................................................................................................................................................................................CATTATTTCAGCCAAACCATGTTGCGA. 27 0 1 1.00 1 0 1 0 0 0
......................TTAATTGGACTTGGCCGTAAC................................................................................................................................................................................................................ 21 0 1 1.00 1 1 0 0 0 0
........................AATTGGACTTGGCCGTAACCTTTCT.......................................................................................................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0
......................TGAATTGGACTTGGCCGTAACCTT............................................................................................................................................................................................................. 24 1 1 1.00 1 0 1 0 0 0
...............................................................................................................................................................................................................................CATTATTTCAGCCAAACCATGTTGCGAT 28 0 1 1.00 1 1 0 0 0 0
.........................ATTGGACTTGGCCGTAACCTTTC........................................................................................................................................................................................................... 23 0 1 1.00 1 0 1 0 0 0
....................................................................................................................TGATTCAGATTAAGAGGAGAGAA................................................................................................................ 23 1 1 1.00 1 1 0 0 0 0
.......................TAATTGGACTTGGCCGTAACC............................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0
.......................................................................................................................................................................TTAAAGGTGAGTAACATTTTAATTT........................................................... 25 0 3 0.33 1 0 1 0 0 0
.................................................................................................................................................................ATTTTGTTAAAGTTGAGT........................................................................ 18 1 4 0.25 1 1 0 0 0 0
.............................................................................................................................................AAAAAAGTTTTATTTTGGAAA......................................................................................... 21 2 19 0.21 4 0 3 1 0 0
.............................................................................................................................................AAAAAATTTTTATTTTGGAAC......................................................................................... 21 2 7 0.14 1 0 1 0 0 0
............................................................................................................................ATTAAGAGAGCAGAAATAAAAAA........................................................................................................ 23 3 17 0.06 1 0 0 0 1 0
.............................................................................................................................................AAAAAAGTTTTATTTTGCAACT........................................................................................ 22 3 20 0.05 1 0 1 0 0 0
..................................................................................................................................................................................................................TTATAATGTCTTTTATTATT..................... 20 2 20 0.05 1 0 0 0 0 1
...............................................................................................................................AAGAGGAGAGAAGGAAAAAA........................................................................................................ 20 2 20 0.05 1 0 0 0 1 0
.............................................................................................................................TAAAGAGCCGAGAAATAAAAA......................................................................................................... 21 3 20 0.05 1 0 0 0 1 0
.......................................................................................................................................................................................................TTTTTTTTTATTTGTAATGTTT.............................. 22 1 20 0.05 1 0 0 1 0 0
..............................................................................................................................TAAGATGAGAGAAAAAAAAA......................................................................................................... 20 2 20 0.05 1 0 0 0 1 0

Anti-sense strand reads

CGGTATGTCGGTTTTAAATTTAAATTAACCTGAACCGGCATTGGAAAGACCATTCAAAATAAATGTTTAATTAATTTTTATTAATTTTTATTATTAATTAATAAAAGTTGTTAAAGTCTAAGTCTAATTCTCCTCTCTTTATTTTTTAAAAATAAAACATTTAAAACAATTTCCACTCATTGTAAAATTAAATTTTAAAAAAAAAAAATAAATATTACAAAAAGTAATAAAGTCGGTTTGGTACAACGCTA
***********************************************************.....(((((..((((.((((..(((((((((...))))))))).....)))).))))...))))).............***************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M058
embryo
 M044
female body
 V039
embryo
 V105
male body		 V106
head
..................................CCGGCATTGGAAAGACCATTCAAAAT............................................................................................................................................................................................... 26 0 1 576.00 576 549 26 1 0 0
...................................CGGCATTGGAAAGACCATTCAAAAT............................................................................................................................................................................................... 25 0 1 395.00 395 265 90 38 2 0
...............................GAACCGGCATTGGAAAGACCATTCAAAAT............................................................................................................................................................................................... 29 0 1 32.00 32 14 17 1 0 0
..................................CCGGCATTGGAAAGACCATTCAAAGT............................................................................................................................................................................................... 26 1 1 16.00 16 16 0 0 0 0
.....................................................................................................................CTAAGTCTAATTCTCCTCTCTTTAT............................................................................................................. 25 0 1 15.00 15 9 5 1 0 0
....................................GGCATTGGAAAGACCATTCAAAAT............................................................................................................................................................................................... 24 0 1 15.00 15 8 6 1 0 0
..................................CCGGCATTGGAAAGACCATTCATAAT............................................................................................................................................................................................... 26 1 1 12.00 12 12 0 0 0 0
.................................................................................................TTAATAAAAGTTGTTAAAGTCTAAGT................................................................................................................................ 26 0 3 10.00 30 29 0 1 0 0
...................................CGGCATTGGAAAGACCATTCAAAGT............................................................................................................................................................................................... 25 1 1 9.00 9 9 0 0 0 0
...................................CGGCATTGGAAAGACCATTCATAAT............................................................................................................................................................................................... 25 1 1 9.00 9 9 0 0 0 0
..................................CAGGCATTGGAAAGACCATTCAAAAT............................................................................................................................................................................................... 26 1 1 9.00 9 9 0 0 0 0
................................AACCGGCATTGGAAAGACCATTCAAAAT............................................................................................................................................................................................... 28 0 1 8.00 8 1 6 1 0 0
.....................................................................................................................................................................................................................ATTACAAAAAGTAATAAAGTCGGTTT............ 26 0 1 7.00 7 7 0 0 0 0
....................................................................................................................TCTAAGTCTAATTCTCCTCTCTTTAT............................................................................................................. 26 0 1 6.00 6 3 3 0 0 0
..................................CCGGCATTGGAAAGACCATTCAAAA................................................................................................................................................................................................ 25 0 1 6.00 6 2 4 0 0 0
.....................................................................................................................................................AAATAAAACATTTAAAACAATTTCCACT.......................................................................... 28 0 3 5.33 16 15 1 0 0 0
...................................CGGCATTGGAAAGACCGTTCAAAAT............................................................................................................................................................................................... 25 1 1 5.00 5 0 5 0 0 0
............................................................................................................................................................................................................................AAAGTAATAAAGTCGGTTTGGTACAAC.... 27 0 1 5.00 5 3 2 0 0 0
...................................CGGCATTGGAAAGACCATTCAAAA................................................................................................................................................................................................ 24 0 1 5.00 5 1 4 0 0 0
.......................................................................................................................................................ATAAAACATTTAAAACAATTTCCACT.......................................................................... 26 0 3 4.33 13 12 1 0 0 0
..............................................................................................TAATTAATAAAAGTTGTTAAAGTCTAAGT................................................................................................................................ 29 0 3 4.33 13 8 5 0 0 0
...........................................................................................................................CTAATTCTCCTCTCTTTATTTTTTAA...................................................................................................... 26 0 1 4.00 4 3 0 1 0 0
..............TAAATTTAAATTAACCTGAACCGGCAT.................................................................................................................................................................................................................. 27 0 1 4.00 4 4 0 0 0 0
...................................................................................................................GTCTAAGTCTAATTCTCCTCTCTTTAT............................................................................................................. 27 0 1 4.00 4 1 3 0 0 0
..................................CCGGCATTGGAAAGACCATTCAAATT............................................................................................................................................................................................... 26 1 1 4.00 4 4 0 0 0 0
.................................ACCGGCATTGGAAAGACCATTCAAAAT............................................................................................................................................................................................... 27 0 1 4.00 4 1 2 1 0 0
........CGGTTTTAAATTTAAATTAACCTGAA......................................................................................................................................................................................................................... 26 0 1 4.00 4 4 0 0 0 0
.................................................................................................TTAATAAAAGTTGTTAAAGTCTAATT................................................................................................................................ 26 1 3 3.67 11 11 0 0 0 0
........................................................................................................................................................TAAAACATTTAAAACAATTTCCACT.......................................................................... 25 0 3 3.33 10 10 0 0 0 0
.....................................................................................................................CTAAGTCTAATTCTCCTCTCTTTATTT........................................................................................................... 27 0 1 3.00 3 3 0 0 0 0
....................................................................................................................................................................................................................TATTACAAAAAGTAATAAAGTCGGTT............. 26 0 1 3.00 3 3 0 0 0 0
..................................CGGGCATTGGAAAGACCATTCAAAAT............................................................................................................................................................................................... 26 1 1 3.00 3 3 0 0 0 0
..................................................................................................TAATAAAAGTTGTTAAAGTCTAAGTCT.............................................................................................................................. 27 0 3 3.00 9 7 2 0 0 0
...................................CGGCATTGGAAAGACCATTCAAAATAA............................................................................................................................................................................................. 27 0 1 3.00 3 1 0 2 0 0
.....................................................................................................................................................................................................................ATTACAAAAAGTAATAAAGTCGGTT............. 25 0 1 3.00 3 3 0 0 0 0
..................................................................................................TAATAAAAGTTGTTAAAGTCTAAGT................................................................................................................................ 25 0 3 3.00 9 9 0 0 0 0
..................................CCGGCATTGGAAAGACCATTGAAAAT............................................................................................................................................................................................... 26 1 1 3.00 3 3 0 0 0 0
...........................................................................................................................CTAATTCTCCTCTCTTTATTTTTTAAAA.................................................................................................... 28 0 1 3.00 3 3 0 0 0 0
...................................CGGCATTGGAAAGACCATTCAAAAC............................................................................................................................................................................................... 25 1 1 3.00 3 3 0 0 0 0
..................................CCGGCATTGGAAAGAACATTCAAAAT............................................................................................................................................................................................... 26 1 1 3.00 3 3 0 0 0 0
...................................CAGCATTGGAAAGACCATTCAAAAT............................................................................................................................................................................................... 25 1 1 3.00 3 3 0 0 0 0
..................................CCGGCATTGGAAAGACCATTCAAAATAA............................................................................................................................................................................................. 28 0 1 2.00 2 2 0 0 0 0
...................................CGGCATTGGAAAGACCATTCAAAATAAAT........................................................................................................................................................................................... 29 0 1 2.00 2 1 0 1 0 0
...................................CTGCATTGGAAAGACCATTCAAAAT............................................................................................................................................................................................... 25 1 1 2.00 2 0 0 2 0 0
........CGGTTTTAAATTTAAATTAACCTGAAC........................................................................................................................................................................................................................ 27 0 1 2.00 2 2 0 0 0 0
.......................................................................................................................AAGTCTAATTCTCCTCTCTTTATTTT.......................................................................................................... 26 0 1 2.00 2 1 1 0 0 0
.......................................................................................................................AAGTCTAATTCTCCTCTCTTTATTT........................................................................................................... 25 0 1 2.00 2 1 1 0 0 0
.............TTAAATTTAAATTAACCTGAACCGGCAT.................................................................................................................................................................................................................. 28 0 1 2.00 2 2 0 0 0 0
.............................CTGAACCGGCATTGGAAAGACCATTCA................................................................................................................................................................................................... 27 0 1 2.00 2 2 0 0 0 0
.............................CTGAACCGGCATTGGAAAGACCAT...................................................................................................................................................................................................... 24 0 1 2.00 2 2 0 0 0 0
............................................................................................................TGTTAAAGTCTAAGTCTAATTCTCCTCT................................................................................................................... 28 0 1 2.00 2 2 0 0 0 0
.....................................................................................................................................................................................................................ATTACAAAAAGTAATAAAGTCGGTTGG........... 27 1 1 2.00 2 2 0 0 0 0
...................TTAAATTAACCTGAACCGGCATTGGAA............................................................................................................................................................................................................. 27 0 1 2.00 2 1 1 0 0 0
...................................................................................................................GTCTAAGTCTAATTCTCCTCTCTTTA.............................................................................................................. 26 0 1 2.00 2 0 2 0 0 0
..............................................................................................TAATTAATAAAAGTTGTTAAAGTCTAAG................................................................................................................................. 28 0 3 2.00 6 4 2 0 0 0
..................................CCGGCATTGGAAAGACCATTCAAAATC.............................................................................................................................................................................................. 27 1 1 2.00 2 2 0 0 0 0
...............................................................................................................................................................................................................................GTAATAAAGTCGGTTTGGTACAACGCT. 27 0 1 2.00 2 0 2 0 0 0
..........................................................................................................................TCTAATTCTCCTCTCTTTATTTTTT........................................................................................................ 25 0 1 2.00 2 1 1 0 0 0
..................................CCGGCATTGGAAAGACTATTCAAAAT............................................................................................................................................................................................... 26 1 1 2.00 2 2 0 0 0 0
..................................CCGGCATTGGAAAGACCATTCAAA................................................................................................................................................................................................. 24 0 1 2.00 2 2 0 0 0 0
....................................................................................................................................................................................................................TATTACAAAAAGTAATAAAGTCGGTTT............ 27 0 1 2.00 2 2 0 0 0 0
..................................CCGGCATTGGAAAGACCGTTCAAAAT............................................................................................................................................................................................... 26 1 1 2.00 2 1 1 0 0 0
...................................CGGCATTGGAAAGAACATTCAAAAT............................................................................................................................................................................................... 25 1 1 2.00 2 2 0 0 0 0
...................................CGGCATTGGAAAGACCATTCAAAATA.............................................................................................................................................................................................. 26 0 1 2.00 2 1 1 0 0 0
............................CCTGAACCGGCATTGGAAAGACCATTC.................................................................................................................................................................................................... 27 0 1 2.00 2 2 0 0 0 0
................................................................................................................................TCTCCTCTCTTTATTTTTTAAAAAT.................................................................................................. 25 0 1 2.00 2 2 0 0 0 0
..................................CCGGCATTGGAAAGACCATTCAAAAC............................................................................................................................................................................................... 26 1 1 2.00 2 2 0 0 0 0
..................................CCGGCATTGGAAGGACCATTCAAAAT............................................................................................................................................................................................... 26 1 1 2.00 2 2 0 0 0 0
...................................CGGCATGGGAAAGACCATTCAAGAT............................................................................................................................................................................................... 25 2 1 2.00 2 0 0 2 0 0
..................................CCGGCATTGGAAAGACCATTCAAAAA............................................................................................................................................................................................... 26 1 1 2.00 2 2 0 0 0 0
....................................................................................................................TCTAAGTCTAATTCTCCTCTCTTTGT............................................................................................................. 26 1 1 2.00 2 2 0 0 0 0
.........................................................................................................................................................AAAACATTTAAAACAATTTCCACT.......................................................................... 24 0 3 1.67 5 5 0 0 0 0
.....................................................TCAAAATAAATGTTTAATTAATTTT............................................................................................................................................................................. 25 0 3 1.67 5 5 0 0 0 0
...........................................................................................TATTAATTAATAAAAGTTGTTAAAGTCT.................................................................................................................................... 28 0 3 1.33 4 4 0 0 0 0
.........................................................................................................................GTCTCATTCTCCTCTCTTTATTTTTT........................................................................................................ 26 1 1 1.00 1 1 0 0 0 0
....ATGTCGGTTTTAAATTTAAATGAAC.............................................................................................................................................................................................................................. 25 1 1 1.00 1 1 0 0 0 0
............................................................................................................................TAATTCTCCTCTCTTTATTTTTTAA...................................................................................................... 25 0 1 1.00 1 1 0 0 0 0
..................................CCGGCAATGGAAAGACCATTCAAAAT............................................................................................................................................................................................... 26 1 1 1.00 1 1 0 0 0 0
.............................................................................................................................................................................................................................AAGTAATAAAGTCGGTTTGGTACAA..... 25 0 1 1.00 1 0 1 0 0 0
..................................CCGGCATGGGAAAGACCATTCAAAAT............................................................................................................................................................................................... 26 1 1 1.00 1 1 0 0 0 0
....................................................................................................................TCTAAGTCTAATTCTCCTCTCTTTATTT........................................................................................................... 28 0 1 1.00 1 0 1 0 0 0
...................................CGGCATTGGAAAGACCTTTCAAAAT............................................................................................................................................................................................... 25 1 1 1.00 1 0 1 0 0 0
...............................................................................................................TAAAGTCTAAGTCTAATTCTCCTCTCTT................................................................................................................ 28 0 1 1.00 1 0 1 0 0 0
.............................................................................................................GTTAAAGTCTAAGTCTAATTCTCCT..................................................................................................................... 25 0 1 1.00 1 0 1 0 0 0
.......CCGGTTTTAAATTTAAATTAACCTGAAC........................................................................................................................................................................................................................ 28 1 1 1.00 1 1 0 0 0 0
.....................................................................................................................CTAAGTCTAATTCTCCTTT................................................................................................................... 19 1 1 1.00 1 1 0 0 0 0
................................AACCGGCATTGGAAAGACCGTTCAAAAT............................................................................................................................................................................................... 28 1 1 1.00 1 0 1 0 0 0
..........................................................................................................................CCTAATTCTCCTCTCTTTATTTTTT........................................................................................................ 25 1 1 1.00 1 1 0 0 0 0
...........................................................................................................TTGTTAAAGTCTAAGTCTAATTCT........................................................................................................................ 24 0 1 1.00 1 1 0 0 0 0
...................................GAGCATTGGAAAGACCATTCAAAAT............................................................................................................................................................................................... 25 2 1 1.00 1 1 0 0 0 0
...................................CGTCATTGCAAAGACCATTCAAAAT............................................................................................................................................................................................... 25 2 1 1.00 1 0 0 1 0 0
.......TCGGTTTTAAATTTAAATTAACCTGAGC........................................................................................................................................................................................................................ 28 1 1 1.00 1 1 0 0 0 0
............TTTAAATTTAAATTAACCTGAACCGGCAT.................................................................................................................................................................................................................. 29 0 1 1.00 1 0 0 1 0 0
..................................CCGGCATTGGAAAGACCATTTAAAAT............................................................................................................................................................................................... 26 1 1 1.00 1 1 0 0 0 0
...................................CGGCATTGCAAAGACCATTCAAAAT............................................................................................................................................................................................... 25 1 1 1.00 1 1 0 0 0 0
........................................................................................................................AGTCTAATTCTCCTCTCTTTATTTTTT........................................................................................................ 27 0 1 1.00 1 0 1 0 0 0
......................................CATTGGAAAGACCATTCAAAGT............................................................................................................................................................................................... 22 1 1 1.00 1 1 0 0 0 0
..................................CCGGAATTGGAAAGACCATTCAAAAT............................................................................................................................................................................................... 26 1 1 1.00 1 1 0 0 0 0
.........................................................................................................................GTCTAATTCTCCTCTCTTTATTTTT......................................................................................................... 25 0 1 1.00 1 1 0 0 0 0
..................................CCGGCATTGGAAAGACCAGT..................................................................................................................................................................................................... 20 1 1 1.00 1 1 0 0 0 0
...................................CGGCATTGGAAAGACCAGTCAAAAT............................................................................................................................................................................................... 25 1 1 1.00 1 1 0 0 0 0
..................................CCGGCATTGTAAAGACCATTCAAAAT............................................................................................................................................................................................... 26 1 1 1.00 1 1 0 0 0 0
.....................................................................................................................CTAAGTCTAATTCTCCTCTCTTTATTTGT......................................................................................................... 29 1 1 1.00 1 1 0 0 0 0
..................................CCGGCATCGGAAAGACCATTCAAAAT............................................................................................................................................................................................... 26 1 1 1.00 1 1 0 0 0 0
.....................................................................................................................CTAAGTCTAATTCTCCTCTCTTTATTGT.......................................................................................................... 28 1 1 1.00 1 1 0 0 0 0
.........................................................................................................................GTCTAATTCTCCTCTCTTTATTTTTT........................................................................................................ 26 0 1 1.00 1 0 1 0 0 0
.........................................CGGAAAGACCATTCAAAATAAATGTTT....................................................................................................................................................................................... 27 1 1 1.00 1 1 0 0 0 0
..................................................................................................................AGTCTAAGTCTAATTCTCCTCTCTTTAT............................................................................................................. 28 0 1 1.00 1 0 1 0 0 0
...................................CGGCATTAGAAAGACCATTCAAAAT............................................................................................................................................................................................... 25 1 1 1.00 1 1 0 0 0 0
.....................................................................................................................CTAAGTCTAATTCTCCTCTCTTTATCTT.......................................................................................................... 28 1 1 1.00 1 1 0 0 0 0
...................................................................................................................GTCTAAGTCTAATTCTCCT..................................................................................................................... 19 0 1 1.00 1 0 1 0 0 0
.......................................................................................................................................................................................................................TACAAAAAGTAATAAAGTCGGTTTGGTAC....... 29 0 1 1.00 1 0 1 0 0 0
..................................CCGGCATTGGAAAGACCATTCAAGAT............................................................................................................................................................................................... 26 1 1 1.00 1 1 0 0 0 0
..................................................................................................TAATAAAAGTTGTTAAAGTCTAAGTC............................................................................................................................... 26 0 3 1.00 3 2 1 0 0 0
.............................................................................................................GTTAAAGTCTAAGTCTAATTCTCCTCT................................................................................................................... 27 0 1 1.00 1 0 1 0 0 0
...............................GAACCGGCATTGGAAAGACCATTCAA.................................................................................................................................................................................................. 26 0 1 1.00 1 1 0 0 0 0
...................................CAGCATTGGAAAGACCATTCAAAAC............................................................................................................................................................................................... 25 2 1 1.00 1 1 0 0 0 0
...............................GAACCGGCATTGGAAAGACCATTCAAA................................................................................................................................................................................................. 27 0 1 1.00 1 1 0 0 0 0
.....................................................................................................................CTAAGTCTAATTCTCCTCTCTT................................................................................................................ 22 0 1 1.00 1 1 0 0 0 0
.......................................ATTGGAAAGACCATTCAAAAT............................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0
...............................GAACCGGCATTGGAATGACCATTCAAAAT............................................................................................................................................................................................... 29 1 1 1.00 1 1 0 0 0 0
.....................................................................................................................................................................................................................ATTACAAAAAGTAATAAAGTCGGTTTG........... 27 0 1 1.00 1 1 0 0 0 0
...................................CGGCATTGGAAAGATCATTCAAAAT............................................................................................................................................................................................... 25 1 1 1.00 1 1 0 0 0 0
...................................CGGCATTGGAAGGACCATTC.................................................................................................................................................................................................... 20 1 1 1.00 1 0 1 0 0 0
.....................................................................................................................................................................................................................ATTACAAAAAGTAATAAAGTCCTT.............. 24 2 1 1.00 1 1 0 0 0 0
...............................................................................................................TAAAGTCTAAGTCTAATTCTCCTCTCT................................................................................................................. 27 0 1 1.00 1 1 0 0 0 0
....................................................................................................................TCTAAGTCTAATTCTCCTCTCTTTATT............................................................................................................ 27 0 1 1.00 1 0 1 0 0 0
...........................................................................................................................CTAATTCTCCTCTCTTTATTTTT......................................................................................................... 23 0 1 1.00 1 1 0 0 0 0
............TTTAAATTTAAATTAACCTGAACCG...................................................................................................................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0
...................................CGGCATTGGAAAGACCATTCAAAAA............................................................................................................................................................................................... 25 1 1 1.00 1 1 0 0 0 0
...............................GAACCGCCATTGGAAAGACCATTCAAAAT............................................................................................................................................................................................... 29 1 1 1.00 1 0 0 1 0 0
....................................................................................................................ACTAAGTCTAATTCTCCTCTCTTTAT............................................................................................................. 26 1 1 1.00 1 0 1 0 0 0
...................................CGGCATTGGAAAGACCATTC.................................................................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0
..................................CCGGCATTGGAAAGACCATTCAGAAT............................................................................................................................................................................................... 26 1 1 1.00 1 1 0 0 0 0
....................................................................................................................TCTAAGTCTAATTCTCCTCTCTTTTT............................................................................................................. 26 1 1 1.00 1 1 0 0 0 0
...................TTAAATTAACCTGAACCGGCATTGAA.............................................................................................................................................................................................................. 26 1 1 1.00 1 0 1 0 0 0
..................................CAGGCATTGGAAAGACCATTCAAAGT............................................................................................................................................................................................... 26 2 1 1.00 1 1 0 0 0 0
..........................................................................................................................TCTAATTCTCCTCTCTTTATTTTTTAA...................................................................................................... 27 0 1 1.00 1 1 0 0 0 0
CGGTATGTCGGTTTTAAATTTAA.................................................................................................................................................................................................................................... 23 0 1 1.00 1 1 0 0 0 0
.....................................................................................................................CTAAGTCTAATTCTCCTCTGTTTATTTT.......................................................................................................... 28 1 1 1.00 1 0 1 0 0 0
................................................................................................................................................TTTAAAAATAAAACATTTAAAACAAT................................................................................. 26 0 3 1.00 3 3 0 0 0 0
..........................................................................................................................TCTAATTCTCCTCTCTTTATTTTTTA....................................................................................................... 26 0 1 1.00 1 1 0 0 0 0
..............................TGAACCGGCATTGGAAAGACCAT...................................................................................................................................................................................................... 23 0 1 1.00 1 0 0 0 1 0
...................................CGGCATTGGAAAGACCAGT..................................................................................................................................................................................................... 19 1 1 1.00 1 1 0 0 0 0
............................CCTGAACCGGCATTGGAAAGACCAT...................................................................................................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0
.....................................................................................................................TTAAGTCTAATTCTCCTCTCTT................................................................................................................ 22 1 1 1.00 1 0 1 0 0 0
...................................CGGCCTTGGAAAGACCATTCAAAAT............................................................................................................................................................................................... 25 1 1 1.00 1 1 0 0 0 0
...................................GGGCATTGGAAAGACCATTCAAAAT............................................................................................................................................................................................... 25 1 1 1.00 1 1 0 0 0 0
............................................................................................................TGTTAAAGTCTAAGTCTAATCCT........................................................................................................................ 23 1 1 1.00 1 1 0 0 0 0
..................................................................................................................................TCCTCTCTTTATTTTTTAAAAAT.................................................................................................. 23 0 1 1.00 1 1 0 0 0 0
...........................................................................................TATTAATTAATAAAAGTTGTTAAAGT...................................................................................................................................... 26 0 3 1.00 3 3 0 0 0 0
....................................GGCATTGGAAAGACCCTTCAAAAT............................................................................................................................................................................................... 24 1 1 1.00 1 0 1 0 0 0
..................................CCGGTATTGGAAAGACCATTCAAAAT............................................................................................................................................................................................... 26 1 1 1.00 1 1 0 0 0 0
...................................CGGCATTGGACAGACCATTCAAAAT............................................................................................................................................................................................... 25 1 1 1.00 1 1 0 0 0 0
.....................................................................................................................CTAAGTCTAATTCTCCTCTCTTTATTTT.......................................................................................................... 28 0 1 1.00 1 1 0 0 0 0
.....................................................................................................................................................................................................................ATTACAAAAAGTAATAAAGTCGGTTTGC.......... 28 1 1 1.00 1 1 0 0 0 0
...................................CGGCATTGGAAAGACCATTCAAA................................................................................................................................................................................................. 23 0 1 1.00 1 1 0 0 0 0
..................................................................................................................AGTCTAAGTCTAATTCTCCTCTCTTT............................................................................................................... 26 0 1 1.00 1 0 0 1 0 0
..................................CCGGCATTGGAAAGACCATT..................................................................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0
................................................................................................................................CCTCCTCTCTTTATTTTTTAAAAAT.................................................................................................. 25 1 1 1.00 1 1 0 0 0 0
..................................CCGGCATTGGAAAGACCA....................................................................................................................................................................................................... 18 0 1 1.00 1 1 0 0 0 0
.....................................................................................................................................................................................................................ATTACAAAAAGTAATAAAGTCGGT.............. 24 0 1 1.00 1 1 0 0 0 0
.............................................................................................................................AATTCTCCTCTCTTTATTTTTTAA...................................................................................................... 24 0 1 1.00 1 0 1 0 0 0
...............................GAACCGGCATTGGGAAGACCATTCAAAAT............................................................................................................................................................................................... 29 1 1 1.00 1 0 1 0 0 0
.....................................................................................................................CTAAGTCTAATTCTCCTCTCTTTATTTTT......................................................................................................... 29 0 1 1.00 1 1 0 0 0 0
.........................................................................................................................................................AAAACATTTAAAACAATTTCCACTCAT....................................................................... 27 0 3 1.00 3 3 0 0 0 0
...................................CAGCATTGGAAAGACCATTCAAAGT............................................................................................................................................................................................... 25 2 1 1.00 1 1 0 0 0 0
........................................................................................................................................................................................................................ACAAAAAGTAATAAAGTCGGTTTGGTAC....... 28 0 1 1.00 1 1 0 0 0 0
...........................................................................................................................CTAATTCTCCTCTCTTTATTTTTCAAA..................................................................................................... 27 1 1 1.00 1 1 0 0 0 0
...........................................................................................................................CTAATTCTCCTCTCTTTAT............................................................................................................. 19 0 1 1.00 1 1 0 0 0 0
......................................................................................................................CAAGTCTAATTCTCCTCTCTTTATTTTTT........................................................................................................ 29 1 1 1.00 1 1 0 0 0 0
.................................................................................................................AAGTCTAAGTCTAATTCTCCTCTCTT................................................................................................................ 26 0 1 1.00 1 0 1 0 0 0
...................................CGGCATTGGAAAGACCATTCAAAATC.............................................................................................................................................................................................. 26 1 1 1.00 1 1 0 0 0 0
.....................................................................................................................CTAAGTCTAATTCTCCTCTCTTTATTTC.......................................................................................................... 28 1 1 1.00 1 0 1 0 0 0
..................................................................................................................AGTCTACGTCTAATTCTCCTCTCTTTAT............................................................................................................. 28 1 1 1.00 1 0 0 1 0 0
..GTATGTCGGTTTTAAATTTAAATTAA............................................................................................................................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0
CGGTATGTCGGTTTTAAATTTAAATT................................................................................................................................................................................................................................. 26 0 1 1.00 1 1 0 0 0 0
..........................................................................................................................TCTAATTCTCCTCTCTTTATTTT.......................................................................................................... 23 0 1 1.00 1 1 0 0 0 0
....................................................................................................................TCTAAGTCTAATTCTCCTCTCTTCAT............................................................................................................. 26 1 1 1.00 1 1 0 0 0 0
...................TTAAATTAACCTGAACCGGCATTGTA.............................................................................................................................................................................................................. 26 1 1 1.00 1 1 0 0 0 0
..................................TCGGCATTGGAAAGACCATTCAAAAT............................................................................................................................................................................................... 26 1 1 1.00 1 1 0 0 0 0
..........................................................................................................................................................................................................................AAAAAGTAATAAAGTCGGTTTGGTACAAC.... 29 0 1 1.00 1 0 1 0 0 0
.........................................................................................................................................................................TTTCCACTCATTGTAAAATTAAATTGT....................................................... 27 1 1 1.00 1 1 0 0 0 0
...................................CGGCATTGGAAAGACCATTCGAAAT............................................................................................................................................................................................... 25 1 1 1.00 1 1 0 0 0 0
.........................................................................................................................GTCTAATTCTCCTCTCTTTATTTT.......................................................................................................... 24 0 1 1.00 1 0 1 0 0 0
..............TAAATTTAAATTAACCTGAACCGGCATT................................................................................................................................................................................................................. 28 0 1 1.00 1 1 0 0 0 0
...................................CGGCATTGGAAAGACCATT..................................................................................................................................................................................................... 19 0 1 1.00 1 1 0 0 0 0
............................................................................................................................................................................................................................AAAGTAATAAAGTCGGTTTGGTACAACG... 28 0 1 1.00 1 0 0 1 0 0
..................................CCGGCATTGGAAAGACCATTCAA.................................................................................................................................................................................................. 23 0 1 1.00 1 1 0 0 0 0
....................................................................................................................................................................................................................TATTACAAAAAGTAATAAAGTCGGTGT............ 27 1 1 1.00 1 1 0 0 0 0
..........................................................................................TTATTAATTAATAAAAGTTGTTAAAGT...................................................................................................................................... 27 0 3 1.00 3 2 0 1 0 0
..................................CCTGCATTGGAAAGACCATTCAAAAT............................................................................................................................................................................................... 26 1 1 1.00 1 1 0 0 0 0
...................................CGGCATCGGAAAGACCATTCAAAAT............................................................................................................................................................................................... 25 1 1 1.00 1 1 0 0 0 0
...................................CGGCATTGGAAAGACCATTTAAAAT............................................................................................................................................................................................... 25 1 1 1.00 1 1 0 0 0 0
...................................CGGCATTGGGAAGACCATTCAAAAT............................................................................................................................................................................................... 25 1 1 1.00 1 1 0 0 0 0
.....................................................................................................................CTAAGTCTAATTCTCCTCTCTTTATT............................................................................................................ 26 0 1 1.00 1 1 0 0 0 0
..................................CCGGCATTGGGAAGACCATTCAAAGT............................................................................................................................................................................................... 26 2 1 1.00 1 1 0 0 0 0
...................................CGTCATTGGAAAGACCATTCAAAAT............................................................................................................................................................................................... 25 1 1 1.00 1 0 0 1 0 0
................................AACCGGCATTGGAAAGACCATTCAAAA................................................................................................................................................................................................ 27 0 1 1.00 1 0 1 0 0 0
................................................................................................................AAAGTCTAAGTCTAATTCTCCTCTCTT................................................................................................................ 27 0 1 1.00 1 0 1 0 0 0
...................................CAGCATTGGAAAGACTATTCAAAAT............................................................................................................................................................................................... 25 2 1 1.00 1 1 0 0 0 0
..................................CCGGCATTGGAAAGACCATTCCT.................................................................................................................................................................................................. 23 2 1 1.00 1 1 0 0 0 0
.....................................................................................................................CTAAGTCTAATTCTCCTCTC.................................................................................................................. 20 0 1 1.00 1 1 0 0 0 0
.....................................................................................................................CTAAGTCTAATTCTCCTCTCTTTTTTT........................................................................................................... 27 1 1 1.00 1 1 0 0 0 0
...............................GAACCGGCATTGGAAAGACCATTCAAAGT............................................................................................................................................................................................... 29 1 1 1.00 1 1 0 0 0 0
.............................................................................................................................AATTCTCCTCTCTTTATTTTTTAAA..................................................................................................... 25 0 1 1.00 1 1 0 0 0 0
.............................CTGAACCGGCATTGGAAAGACCATT..................................................................................................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0
.....................................................................................................................CTAAGTCTAATTCTCCTCTCTTTGT............................................................................................................. 25 1 1 1.00 1 1 0 0 0 0
........................TTAACCTGAACCGGCATTGGAAAGACCAT...................................................................................................................................................................................................... 29 0 1 1.00 1 1 0 0 0 0
.........................TAACCTGAACCGGCATTGGAAAGACC........................................................................................................................................................................................................ 26 0 1 1.00 1 1 0 0 0 0
..............................................................................................................................................................................................................................AGTAATAAAGTCGGTTTGGTACAACGCT. 28 0 1 1.00 1 0 1 0 0 0
...................................CGGCATTGGAAAGACCATTCAAAATTTAG........................................................................................................................................................................................... 29 3 1 1.00 1 1 0 0 0 0
.........................................................................................................................................................................................................................CAAAAAGTAATAAAGTCGGTTTGGCAC....... 27 1 1 1.00 1 1 0 0 0 0
...................................CGGCATTGGAAAGATCAT...................................................................................................................................................................................................... 18 1 1 1.00 1 1 0 0 0 0
...................................CGGCATTGGAAAGACCATACAAAAT............................................................................................................................................................................................... 25 1 1 1.00 1 0 0 1 0 0
...........................................................................................................................CTAATTCTCCTCTCTTTATTTTTT........................................................................................................ 24 0 1 1.00 1 1 0 0 0 0
...TATGTCGGTTTTAAATTTAAATTAGC.............................................................................................................................................................................................................................. 26 1 1 1.00 1 1 0 0 0 0
.........................................CGGAAAGACCATTCAAAAT............................................................................................................................................................................................... 19 1 1 1.00 1 1 0 0 0 0
.......................................ATTGGAAAGACCATTCATAAT............................................................................................................................................................................................... 21 1 1 1.00 1 1 0 0 0 0
..................................CCGGCATTGGAAAGACCATTCAAT................................................................................................................................................................................................. 24 1 1 1.00 1 1 0 0 0 0
...................................................................................................................GTCTAAGTCTAATTCTCCTC.................................................................................................................... 20 0 1 1.00 1 0 0 1 0 0
.......................................................................................................................AAGTCTAATTCTCCTCTCTTTATTTTTT........................................................................................................ 28 0 1 1.00 1 1 0 0 0 0
...TATGTCGGTTTTAAATTTAAATTAACC............................................................................................................................................................................................................................. 27 0 1 1.00 1 1 0 0 0 0
......................................................................................................................TAAGTCTAATTCTCCTCTCTTTAT............................................................................................................. 24 0 1 1.00 1 1 0 0 0 0
...................................CGGTATGGGAAAGACCATTCAAAAG............................................................................................................................................................................................... 25 3 1 1.00 1 0 0 1 0 0
........................................................................................................AAGTTGTTAAAGTCTAAGTCTAATTCT........................................................................................................................ 27 0 1 1.00 1 0 1 0 0 0
......................................................................................................................AAAGTCTAATTCTCCTCTCTTTATTTT.......................................................................................................... 27 1 1 1.00 1 0 1 0 0 0
.............................CTGAACCGGCATTGGAAAGACCATTC.................................................................................................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0
...................TTAAATTAACCTGAACCGGCATTGGA.............................................................................................................................................................................................................. 26 0 1 1.00 1 1 0 0 0 0
.......TCGGTTTTAAATTTAAATTAACCTGAAC........................................................................................................................................................................................................................ 28 0 1 1.00 1 1 0 0 0 0
.........................................................................................................................................................................................................................CAAAAAGTAATAAAGTCGGTTTGGTGC....... 27 1 1 1.00 1 1 0 0 0 0
........................................................................................................................................................................................................................ACAAAAAGTAATAAAGTCGGTTTGGTA........ 27 0 1 1.00 1 0 0 1 0 0
..............................................................................................................TTAAAGTCTAAGTCTAATTCTCCTCTCTT................................................................................................................ 29 0 1 1.00 1 0 1 0 0 0
.....................................................................................................................CTAAGTCTAATTCTCCTCTCTTTTT............................................................................................................. 25 1 1 1.00 1 1 0 0 0 0
.....................................................TCAAAATAAATGTTTAATTAATTTTT............................................................................................................................................................................ 26 0 3 0.67 2 2 0 0 0 0
.................................................................................................TTAATAAAAGTTGTTAAAGTCTAAG................................................................................................................................. 25 0 3 0.67 2 2 0 0 0 0
..................................................................................................CAATAAAAGTTGTTAAAGTCTAAGT................................................................................................................................ 25 1 3 0.67 2 2 0 0 0 0
...................................................................................................AATAAAAGTTGTTAAAGTCTAAGT................................................................................................................................ 24 0 3 0.67 2 2 0 0 0 0
......................................................................................................AAAAGTTGTTAAAGTCTAAGTCTAA............................................................................................................................ 25 0 3 0.67 2 2 0 0 0 0
..................................................................................................TAATAAAAGTTGTTAAAGTCTAATT................................................................................................................................ 25 1 3 0.67 2 2 0 0 0 0
..............................................................................................TAATTAATAAAAGTTGTTAAAGTCT.................................................................................................................................... 25 0 3 0.67 2 2 0 0 0 0
...................................CGGCATTGGAAAGGCCATTCAAAAT............................................................................................................................................................................................... 25 1 3 0.67 2 2 0 0 0 0
...................................CGGCATTGGTAAGACCATTCAAAAT............................................................................................................................................................................................... 25 1 3 0.67 2 2 0 0 0 0
....................................................................................................ATAAAAGTTGTTAAAGTCTAAGTCT.............................................................................................................................. 25 0 3 0.67 2 2 0 0 0 0
.................................................................................................TTAATAAAAGTTGTTAAAGTCTAAGTCT.............................................................................................................................. 28 0 3 0.67 2 1 1 0 0 0
......................................................................................................................AAAGTCTAATTCTCCTCCCT................................................................................................................. 20 2 2 0.50 1 1 0 0 0 0
.............................................................................................TTAATTAATAAAAGTTGTTAAAGTCT.................................................................................................................................... 26 0 3 0.33 1 0 0 0 0 1
.................................................................................................TAAATAAAAGTTGTTAAAGTCT.................................................................................................................................... 22 1 3 0.33 1 1 0 0 0 0
....................................................................................................................................................AAAATAAAACATTTAAAACAATTTCCAGT.......................................................................... 29 1 3 0.33 1 1 0 0 0 0
.................................................................................................ATAATAAAAGTTGTTAAAGTCTAATT................................................................................................................................ 26 2 3 0.33 1 1 0 0 0 0
.....................................................TCAAAATAAATGTTTAATTAATTT.............................................................................................................................................................................. 24 0 3 0.33 1 1 0 0 0 0
.....................................................TCAAAATAAATGTTTAATTAACTTT............................................................................................................................................................................. 25 1 3 0.33 1 1 0 0 0 0
...........................................................................................TATTAATTAATAAAAGTTGTTCTAG....................................................................................................................................... 25 2 3 0.33 1 1 0 0 0 0
..............................................................................................TAATTAATAAAAGTTGTTAAAGTGT.................................................................................................................................... 25 1 3 0.33 1 1 0 0 0 0
.......................................................................................................AAAGTTGTTAAAGTCTAAGT................................................................................................................................ 20 0 3 0.33 1 1 0 0 0 0
.............................................................................................................................................................CATTTAAAACAATTTCCACTCATTGT.................................................................... 26 0 3 0.33 1 1 0 0 0 0
.................................................................................................................................................TTAAAAATAAAACATTTAAAACAATTTCC............................................................................. 29 0 3 0.33 1 1 0 0 0 0
..................................................................................................GAATAAAAGTTGTTAAAGTCTAAGT................................................................................................................................ 25 1 3 0.33 1 1 0 0 0 0
.....................................................TCAAAATAAATGTTTAATTAATTTTTAT.......................................................................................................................................................................... 28 0 3 0.33 1 1 0 0 0 0
.............................................................................................................................................................CATTTAAAACAATTTCCACTCATTTT.................................................................... 26 1 3 0.33 1 1 0 0 0 0
............................................................................................................................................................ACATTTAAAACAATTTCCACT.......................................................................... 21 0 3 0.33 1 1 0 0 0 0
............................................................................................ATTAATTAATAAAAGTTGTTAAAGTCTAA.................................................................................................................................. 29 0 3 0.33 1 0 1 0 0 0
.......................................................................................................................................................ATAAAACATTTAAAACAATTTCCACTC......................................................................... 27 0 3 0.33 1 1 0 0 0 0
.................................................................................................TTAATAAAAGTTGTTAAAGTCTAA.................................................................................................................................. 24 0 3 0.33 1 1 0 0 0 0
.......................................................................................................................................................ATAAAACATTTAAAACAATTTCCACTCA........................................................................ 28 0 3 0.33 1 1 0 0 0 0
...........................................................................................TATTAATTAATATAAGTTGTTAAAGTCT.................................................................................................................................... 28 1 3 0.33 1 1 0 0 0 0
..............................................................................................TAATTAATAAAAGTTGTTAAAGTCTAGG................................................................................................................................. 28 1 3 0.33 1 1 0 0 0 0
...........................................GAAAGGCCATTCAAAATAAATGTTT....................................................................................................................................................................................... 25 1 3 0.33 1 0 1 0 0 0
.................................................................................................TTAATAAAAGTTGTTAAAGTCTAAGTC............................................................................................................................... 27 0 3 0.33 1 0 1 0 0 0
.....................................................................................................................................................AAATAAAACATTTAAAACAATTTCCAC........................................................................... 27 0 3 0.33 1 0 1 0 0 0
.............................................................................................................................................................CATTTAAAACAATTTCCATT.......................................................................... 20 1 3 0.33 1 1 0 0 0 0
.................................................................................................CTAATAAAAGTTGTTAAAGTCTAAGT................................................................................................................................ 26 1 3 0.33 1 1 0 0 0 0
........................................................................................................................................................TAAAACATTTAAAACAATTTCCACTC......................................................................... 26 0 3 0.33 1 1 0 0 0 0
..........................................................................................TTATTAATTAATAAAAGTTGTTAAATT...................................................................................................................................... 27 1 3 0.33 1 1 0 0 0 0
.......................................................................................................................................................ATAAAACATTTAAAACAATTGC.............................................................................. 22 1 3 0.33 1 1 0 0 0 0
.................................................................................................CTAATAAAAGTTGTTAAAGTCTAAG................................................................................................................................. 25 1 3 0.33 1 1 0 0 0 0
.....................................................................................................TAAAAGTTGTTGAAGGCTAAGTCT.............................................................................................................................. 24 2 3 0.33 1 0 1 0 0 0
.................................................................................................TTAATAAAAGTTGTTAAAGTCTTAGT................................................................................................................................ 26 1 3 0.33 1 1 0 0 0 0
...........................................................................................TATTAATTAATAAAAGTTGTTATAGT...................................................................................................................................... 26 1 3 0.33 1 1 0 0 0 0
..................................CCGGCATTGGAAAGGCCATTCATAAT............................................................................................................................................................................................... 26 2 3 0.33 1 1 0 0 0 0
...................................................................................................................GTCTAAATCTAATTCTCCTCTCTTTAT............................................................................................................. 27 1 3 0.33 1 0 1 0 0 0
.....................................................................................................TAAAAGTTGTTAAAGTCT.................................................................................................................................... 18 0 3 0.33 1 1 0 0 0 0
.......................................................................................................................................................ATAAAACATTTAAAACACTTTCCACT.......................................................................... 26 1 3 0.33 1 0 1 0 0 0
.............................................................................................................................................................CATTTAAAACAATTTCCACT.......................................................................... 20 0 3 0.33 1 1 0 0 0 0
............................................................................................................................................................ACATTTAAAACAATTTCCACGCAT....................................................................... 24 1 3 0.33 1 1 0 0 0 0
...............................................................................................................................................................................................................................ATAATAAAGTCGGTTTGGTACAACGC.. 26 1 3 0.33 1 0 1 0 0 0
.....................................................................................................................................................AAATAAAACATTTAAAACAATGT............................................................................... 23 1 3 0.33 1 1 0 0 0 0
.......................................................................................................................................................ATAAAACATTTAAAACAATTTCTACT.......................................................................... 26 1 3 0.33 1 1 0 0 0 0
....................................................................................................................................................AAAATAAAACATTTAAAACAATTTCCACT.......................................................................... 29 0 3 0.33 1 1 0 0 0 0
.......................................................................................................................................................ATAAAACATTTAAAACAATTTCCAGT.......................................................................... 26 1 3 0.33 1 1 0 0 0 0
.................................................................................................................................................TTAAAAATAAAACATTTAAAACAATTT............................................................................... 27 0 3 0.33 1 1 0 0 0 0
..................................................................................................................................................................AAAACAATTTCCACTCATTGTAAA................................................................. 24 0 3 0.33 1 1 0 0 0 0
.......................................................................................................................................................TTAAAACATTTAAAACAATTTCCACT.......................................................................... 26 1 3 0.33 1 1 0 0 0 0
.................................................................................................TTAATAAAAGTTGTTAAGGTCTAAGT................................................................................................................................ 26 1 3 0.33 1 0 1 0 0 0
........................................................................................TATTATTAATTAATAAAAGTTGTTAAAGT...................................................................................................................................... 29 0 3 0.33 1 1 0 0 0 0
..............................................................................................TAATTAATAAAAGTTGTTAAAGTCTAATT................................................................................................................................ 29 1 3 0.33 1 1 0 0 0 0
.....................................................................................TTTTATTATTAATTAATAAAAGTTGT............................................................................................................................................ 26 0 3 0.33 1 0 0 1 0 0
.....................................................CCAAAATAAATGTTTAATTAATTT.............................................................................................................................................................................. 24 1 3 0.33 1 1 0 0 0 0
.................................................................................................TTAATAAAAGTTGTTAAAGTC..................................................................................................................................... 21 0 3 0.33 1 1 0 0 0 0
...............................................................................................AATTAATAAAAGTTGTTAAAGTCTAAGT................................................................................................................................ 28 0 3 0.33 1 1 0 0 0 0
.....................................................CCAAAATAAATGTTTAATTAATTTT............................................................................................................................................................................. 25 1 3 0.33 1 1 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droAna3 scaffold_13337:8469152-8469402 + dan_2500 GCCATACAGCCAAAATTTAAATTTAATTGGACTTGGCCGTAACCTTTCTGGTAAGTTTTATTTACAAATTAATTAAAAATAATTAAAAATAATAATTAATTATTTTCAACAATTTCAGATTCAGATTAAGAGGAGAGAAATAAAAAATTTTTATTTTGTAAATTTTGTTAAAGGTGAGTAACATTTTAATTTAAAATTTTTTTTTTTTATTTATAATGTTTTTCATTATTTCAGCCAAACCATGTTGCGAT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droAna3
GCCATACAGCCAAAATTTAAATTTAATTGGACTTGGCCGTAACCTTTCTGGTAAGTTTTATTTACAAATTAATTAAAAATAATTAAAAATAATAATTAATTATTTTCAACAATTTCAGATTCAGATTAAGAGGAGAGAAATAAAAAATTTTTATTTTGTAAATTTTGTTAAAGGTGAGTAACATTTTAATTTAAAATTTTTTTTTTTTATTTATAATGTTTTTCATTATTTCAGCCAAACCATGTTGCGATSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.....................TTTAATTGGACTTGGCCGTAACC...............................................................................................................................................................................................................2315.005320000
.....................TTTAATTGGACTTGGCCGTAACCTT.............................................................................................................................................................................................................2512.002200000
.................................................................................................................TTCAGATTCAGATTAAGAGGAGA...................................................................................................................2311.001001000
.....................................................................................................................................................................................................................................TTCAGCCAAACCATGTTGCGAT2211.001100000
...................AATTTAATTGGACTTGGCCGT...................................................................................................................................................................................................................2111.001010000
.....................TTTAATTGGACTTGGCCGTAACCT..............................................................................................................................................................................................................2411.001010000
...............................................................................................................................................................................................................................CATTATTTCAGCCAAACCATGTTG....2411.001100000
.........................ATTGGACTTGGCCGTAACCTTT............................................................................................................................................................................................................2211.001100000
......................TTAATTGGACTTGGCCGTAACCTTTC...........................................................................................................................................................................................................2611.001100000
........................AATTGGACTTGGCCGTAACCTTT............................................................................................................................................................................................................2311.001010000
.................................................................................................................................................................................................................................TTATTTCAGCCAAACCATGTTGC...2311.001010000
.........................ATTGGACTTGGCCGTAACCTT.............................................................................................................................................................................................................2111.001100000
.................TAAATTTAATTGGACTTGGCCGTAAC................................................................................................................................................................................................................2611.001010000
.....................TTTAATTGGACTTGGCCGTAACCTTTCTG.........................................................................................................................................................................................................2911.001100000
...............................................................................................................ATTTCAGATTCAGATTAAGAGGAGA...................................................................................................................2511.001100000
........................AATTGGACTTGGCCGTAACC...............................................................................................................................................................................................................2011.001010000
...............................................................................................................................................................................................................................CATTATTTCAGCCAAACCATGTTGCGA.2711.001010000
......................TTAATTGGACTTGGCCGTAAC................................................................................................................................................................................................................2111.001100000
........................AATTGGACTTGGCCGTAACCTTTCT..........................................................................................................................................................................................................2511.001100000
...............................................................................................................................................................................................................................CATTATTTCAGCCAAACCATGTTGCGAT2811.001100000
.........................ATTGGACTTGGCCGTAACCTTTC...........................................................................................................................................................................................................2311.001010000
.......................TAATTGGACTTGGCCGTAACC...............................................................................................................................................................................................................2111.001100000
.......................................................................................................................................................................TTAAAGGTGAGTAACATTTTAATTT...........................................................2530.331010000

Generated: 05/18/2015 at 04:47 AM