ID:

dan_2487

 Coordinate:

scaffold_13337:7968943-7969093 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-20.8 -20.7 -20.7

Flybase annnotation

CDS [Dana\GF24345-cds]; exon [dana_GLEANR_9074:1]; intron [Dana\GF24345-in]

No Repeatable elements found

mature
  1. scaffold_9721:899-916 +
  2. scaffold_12613:471425-471442 +
  3. scaffold_12903:615096-615113 -
  4. scaffold_12916:7519187-7519204 +
  5. scaffold_12916:15085229-15085246 -
  6. scaffold_12929:2058742-2058759 -
  7. scaffold_12929:3159749-3159766 -
  8. scaffold_12943:1174624-1174641 +
  9. scaffold_13117:4926282-4926299 +
  10. scaffold_13118:11787-11804 -
  11. scaffold_13248:2746527-2746544 +
  12. scaffold_13266:3330590-3330607 -
  13. scaffold_13266:17562051-17562068 -
  14. scaffold_13334:125813-125830 +
  15. scaffold_13335:1886735-1886752 +
  16. scaffold_13335:2253436-2253453 -
  17. scaffold_13337:3631554-3631571 -
  18. dan_2487  scaffold_13337:7969051-7969068 -
  19. scaffold_13337:18375425-18375442 +
  20. scaffold_13340:7428181-7428198 -
star

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
CTGTGGTGCCCGCCCAGCTTAAGGAAACGCCACTCAAAAGTGACCGTCGGGTAAGTGTCTTCTCCACCTCCTCCCAAAAAAAAAACCGAAAAACTAGATTCCCTAAAACAGAGACCCACTTGGATTAAAATAAAAGCTGAGAATTCCCTTAATTGAGAATCGCTTACACCCACTTGGAGTCGATTTAGCGACACCCACTGGCCAAATGCATTTCCTTTTTGGCCACAACGCGCACACTTCTCCCACATGCG
**************************************************(((((((..(((((..............................(((.....)))..........((....))..............((((......))))...))))).)))))))..(((...((.((((......)))).))...)))************************************************** 		Read size # Mismatch Hit Count Total Norm Total V106
head
 M044
female body
 V039
embryo
 M058
embryo
 V105
male body
...........................CGCCACTCAAAAGTGACCGTCGGT........................................................................................................................................................................................................ 24 1 1 1.00 1 0 1 0 0 0
...........................CGCCACTCAAAAGTGACCGTCGGTCC...................................................................................................................................................................................................... 26 3 1 1.00 1 0 0 1 0 0
............CCCAGCTTAAGGAAACGCCACT......................................................................................................................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0
...............AACTTAAGGAAAGGCCAC.......................................................................................................................................................................................................................... 18 2 4 0.25 1 0 0 0 1 0
................................................................CAGCTCCTCCCCAAAAAAAAA...................................................................................................................................................................... 21 2 6 0.17 1 0 0 0 1 0
...............AACTTAAGGAAAGGCCACC......................................................................................................................................................................................................................... 19 3 20 0.15 3 1 0 0 1 1
......................................................................CTCACAAAAAAAAAACCGCA................................................................................................................................................................. 20 2 15 0.07 1 0 0 0 1 0
................................................................CAACTCCTCCCGAAAAAAA........................................................................................................................................................................ 19 2 17 0.06 1 0 0 0 1 0
...........................................................................AAAAAAAAAACCGAAAAA.............................................................................................................................................................. 18 0 20 0.05 1 0 0 0 1 0

Anti-sense strand reads

GACACCACGGGCGGGTCGAATTCCTTTGCGGTGAGTTTTCACTGGCAGCCCATTCACAGAAGAGGTGGAGGAGGGTTTTTTTTTTGGCTTTTTGATCTAAGGGATTTTGTCTCTGGGTGAACCTAATTTTATTTTCGACTCTTAAGGGAATTAACTCTTAGCGAATGTGGGTGAACCTCAGCTAAATCGCTGTGGGTGACCGGTTTACGTAAAGGAAAAACCGGTGTTGCGCGTGTGAAGAGGGTGTACGC
**************************************************(((((((..(((((..............................(((.....)))..........((....))..............((((......))))...))))).)))))))..(((...((.((((......)))).))...)))************************************************** 		Read size # Mismatch Hit Count Total Norm Total M058
embryo
 M044
female body
 V106
head
 V039
embryo
 V055
head
.......................................................................................................................................CGACTCTTCATGGAATTAGCT............................................................................................... 21 3 1 43.00 43 24 9 5 5 0
.......................................................................................................................................CGACTCTTCATGGAATTAGC................................................................................................ 20 3 7 3.14 22 14 5 2 1 0
........................................................................................................................................GACTCTTCAGGGAATTAGCT............................................................................................... 20 2 1 1.00 1 0 1 0 0 0
...............................................................................................................................................................AGCGAATGTGGGTGAACCTCA....................................................................... 21 0 1 1.00 1 0 1 0 0 0
.......................................................................................................................................CGACTCTTCATGGAATTAGCTC.............................................................................................. 22 3 1 1.00 1 1 0 0 0 0
..........................................................GAAGAGGCGGACGAGGGTTT............................................................................................................................................................................. 20 2 2 0.50 1 0 1 0 0 0
............................CGCTGAGTTTTCACCGGCAGG.......................................................................................................................................................................................................... 21 3 2 0.50 1 0 0 0 0 1
.................................................................................................................................................................................................GTGAGACCGGTTTACGTAATG..................................... 21 3 3 0.33 1 1 0 0 0 0
.......................................................................................................................................CGACTCTTCATGGAATTAG................................................................................................. 19 3 20 0.30 6 2 2 1 1 0
.......................................................................................................................................CGACTCTTCATGGAATTATC................................................................................................ 20 3 14 0.29 4 4 0 0 0 0
...................................................................................................................................................................................................................................GGCGCGTGGGAATAGGGTGT.... 20 3 5 0.20 1 0 0 0 0 1
........................................................................................................................................................................................CATCGCTGTGGGTTAACGGT............................................... 20 3 10 0.20 2 2 0 0 0 0
.........................................................AGAAGAGTTGGAGGGGGGT............................................................................................................................................................................... 19 2 7 0.14 1 0 0 0 0 1
........................................................................................................................................GACTCTTCATGGAATTAGCT............................................................................................... 20 3 19 0.11 2 0 1 0 1 0
....................................................................................................................................................................ACGTGGGTCATCCTCAGCT.................................................................... 19 3 19 0.11 2 0 2 0 0 0
..........................................................................................................................................................................................................GTTTACGTAAAGGGAAA................................ 17 1 12 0.08 1 0 0 0 0 1
..CACCACGGGCGGTTAGAAA...................................................................................................................................................................................................................................... 19 3 13 0.08 1 1 0 0 0 0
...............................................................................................................................................................................................................................TGGTTGCGCGTCTGAAGA.......... 18 3 20 0.05 1 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droAna3 scaffold_13337:7968893-7969143 - dan_2487 CTGTGGTGCCCGCC------------------------CAGCTTAAGGAAACGCCACTCAAAAGTGACCGTCGGGTAAGTGTCTTCTCCA--------------------------CCTCCTCCCAAAAAAAAAA----------------------C------CGAA--AAAC--------------------------------------------------------------------------------T-AGA-TT-CCCTAAAACAG---A----------------------GACCCACTT----------------------------------------GGATTAAAATAA------------------------------------------------------------------------------------AAGCT-GAGAATTCCCTTAATTGAGAATCG----------------------------CTT------------ACACCCACT------TGGAGTCGATTT------------------------------AGCGA---------------C------------ACCC------ACTGGCCAAATGCATTTCCTTTTTGGCCACAACGCGCACACTTCTCCCACATGCG
droBip1 scf7180000396541:126718-126961 - CTGTGGTGCCCGCC------------------------CAGCTTAAGGAGACGCCACTCAAAAGTGACCGTCGGGTAAGTGTCTTCTCC--------------------------TG---CTCCCCAAAAAA--------------------------------AGAC--AAAC--------------------------------------------------------------------------------T-AGA-TT-CCCTAAAACAG---A----------------------GACCCACTT----------------------------------------GGATTAAAATAA------------------------------------------------------------------------------------AAGCT-GAGAATTCCCTTAATTGAGAA----------------------------------------------TCACTTACACCCACTTCGAGTCGATTTA------------------------------ACGA---------------C------------ACCC------ACTGGCCAAATGCATTTCCTTTTTGGCCACAACGCGCACACTTCTCCCACATGCG
droKik1 scf7180000302474:305358-305715 - CCGTGGTGCCCGCC------------------------CAGCTCAAGGAAACGCCGCTCAAAAGTGACCGTCGGGTAAGTGTCTTCCCCA--------------------------CC-------AAAAAAAAGAACGTCCCTATCCCCCAAA--------------------------------------------------------TTTA------------------------------------AACCAA-G----------TCGGA--TAAAATAGGCGCTAAGAGCTGGATTAGAA----------------------------------------TCGCTTGAATTAAATATTCAGA---------GCTCCCAAAAAAATTAAAATATATATCTTAAAAAAGAAACGCCACCAATCCGGATTAAA------------GCGCT-CAGAATTCCCTTAATTGAGCA----------------------------GCACTG------------CCTCCCACTTCGCACTC-----GATTTCCAGACTCG----------------CTGTGGGCGA---------------GCAGCCCCATCAATCCCGGTGCCGCTGCCCAAATGCATTTCCTTTTTGGCCG-------------TCTCCCACATG--
droFic1 scf7180000453833:857627-857915 + CCGTTGTTCCGGCC------------------------CAGCTCAAGGAGACGCCGCTCAAAAGTGACCGTCGGGTAAGTGTCTTCCCCA----------AAAAAAA-AA---------------G---------------------------AA-----------A---------------AAAAATCTGAAAG--AGGGGGGC---C-------------------TCC-AATGGATTAA-ATCAGCAGTCAA-ATA-TT-CCCGGAAAA-------AA---------------------------T----------------------------------------GGATTAAATAA---------------------------------------------------------------------------------------ACC-GAGAATTCCCTTAAACGAGAG----------------------------------------------CCAACCACTTCGAGCTCGAATTGATTTCCAAACGCC----------------TTGTGGGCGA--CGC---GT--T--GCGGCCCCATCAATCCC------GGTGCCCAAATGCATTTCCTTTTTAGCCA-------------TCTCCCACATGCG
droEle1 scf7180000491268:9408-9694 - CCGTGGTGCCGGCC------------------------CAGCTCAAGGAGACGCCGCTGAAAAGTGACCGTCGGGTAAGTGTCTTTTCTACGGCAAACCGAAGAATAAACAA--CTC---CC----------------------------------------------------------------------------------C---C------------------TCG-AAATGGATTAA-AAAAAAACCAAATAGA-AC-CCAGAAAAA-------TA---------------------------T----------------------------------------GGATTAAACCA---------------------------------------------------------------------------------------GCCAAGAAATTCCCTTAAATGAGAG----------------------------------------------CCACCCACTTCGAGCTCGACTTGATTTCCATATGCCA-TATGCC--------TTGTGGGCGA---------------CTGGCCCCATCAATCCC------GCTGCCCAAATGCATTTCCTTTTTAGCCA-------------TCTCCCACATGGC
droRho1 scf7180000778254:29328-29607 + CCGTGGTGCCGGCC------------------------CAGCTCAAGGAGACGCCGCAGAAAAGTGACCGTCGGGTAAGTGTCTTCCCT----------GGGAAA-------------------------------------------------------------------------------AAATCTTGAACCAA----CCC---C------------------TC-CAAATGGATTAAAATCAGAACCCAA-AGT-TCCCCCGAAAATAA---AAAC---------------------------T----------------------------------------GGATTAAATTAA---------------------------------------------------------------------------------------AT-GAGAATTCCCTTAAATGAGAG----------------------------------------------CCACCCACTTCGAGCTCAACTTGATTTCCATATGCC----------------TTGTAGGCGG---------T--CGACTGGCCCCATCAATCCC------GCTGCCCAAATGCATTTCCTTTTTAGCCA-------------TCTCCCACATG--
droBia1 scf7180000302428:10607792-10608061 + CCGTTGTGCCGGCC------------------------CAGCTCAAGGAGACGCCGCTCAAGAGTGACCGTCGGGTAAGTGTCCGCTCC----------GGGGAGTACAGAG--TTC---CCCCC----------------------------------------------AACCACATT----------------------CCC---C------------------TCGCAAACGGATTAA-GCCAGAACCCGA-AGT-------------------------------------------------T----------------------------------------GGAT----------------------------------------------------------------------------------------------ACCAGGGAATGCCCTTAAACGAGGG----------------------------------------------CCACCCACCTCCGGCGCGACTTGATTTCCACACTCG----------------CTGTGGGCGA--CCCA--GC--G--CCGTCCCCATCAATCCC------GCTGCCCAAATGCATTTCCTTTTTAGCCA-------------TCTCCCACATGG-
droTak1 scf7180000414445:35631-35871 - CCGTTGTGCCGGCC------------------------CAGCTGAAGGAGACGCCGCTGAAAAGTGACCGTCGGGTAAGTGTCTAAGCC--------------------------TCC---T----------------------------------------------------------------------------------C---C------------------TCA-AAACGGATTAA-ATCAGAGCCCCC-----TA-CCAGTAAAA-------AA---------------------------T----------------------------------------GGATTAAATATA---------------------------------------------------------------------------------------GC-CAGAATTCCCTTAAACGAGAGCT---------------------------------------------CACCAACT-------------------------C-A---------------CTGTGGGCGA--CTCTGAGT--GGCCTGTCCCCATCAATCCC------GCTGCCCAAATGCATTTCCTTTTTAGCCATG---C-----CATCTCCCACATG--
droEug1 scf7180000408746:485-774 + CCGTTGTGCCGGCC------------------------CAGCTCAAGGAGACGCCGATCAAAAGTGACCGTCGGGTAAGTGTCTTCTTT----------GAGAAAAACA--------------------------------------------------------------------------AAAATCCCAAAC--A----CTCCTCCATCAAACC-AA-----------AAATGGATTAA-ATCAGAACCTCT-AGAGTC-ATCGAAAAA------AAA---------------------------T----------------------------------------GGATTAAATAA---------------------------------------------------------------------------------------GCC-GAGAATTCCCTTAAATGAGAGCTG-------------------------------------------CCACCCACTTCCAGCTCGACTTGATTTTGAAAC-----TTTGC---------CTGTGGGCGA---------------CTGGCCCCATCAATCCC------GCTGCCCAAATGCATTTCCTTTTTAGCCA-------------TCTCCCACATG--
dm3 chr3L:8669399-8669705 + CCGTTGTGCCGGCC------------------------CAGCTCAAGGAGACGCCGCTCAAAAGTGACCGTCGGGTAAGTTTCTTTC------------GAGAAAAATAA--GACTC--------G---------------------------AA-----------A-------------AAAAAAATCCAAAGCCA---------------AAAAC-AAAAAACCCCGTC-AATGGATTAA-ATCAGAACCTCT-AGT-TC-CCCGAAATC-------TG---------------------------T----------------------------------------GGATTAACTGAA---------------------------------------------------GCG-AA-------------------------CCAAACC-GAGAATTCCCCTAATTGAGAG----------------------------------------------CCACCCACTTCGAGCTCAAGTTGATTTCCATTCGCGA---------------CTGTGGGCGA---------------CTGGCCCCATCAATCCC------GCTGCCCAAATGCATTTCCTTTTTAGCCA-------------TCTCCCACATGG-
droSim2 3l:8458599-8458903 + dsi_11312 CCGTTGTGCCGGCC------------------------CAGCTCAAGGAGACGCCGCTCAAAAGTGACCGTCGGGTAAGTGTCTTTC------------GAGAAAAATAT--GCCTC--------G---------------------------AA-----------A---------------AAAAATCCGAAACCA---------------AAACC-AAAAACCCCCGTC-AATGGATTAA-ATCAGAACCTCT-AGT-TC-CCCGAAATC-------TG---------------------------T----------------------------------------GGATTAAATGAA---------------------------------------------------GCG-AA-------------------------CCAAACC-GAGAATTTCCCTAATTGAGAG----------------------------------------------CCACCCACTTCGAGCTCGAGTTGATTTCCATTCGCGA---------------CTGTGGGCGA---------------CTGGCCCCATCAATCCC------GCTGCCCAAATGCATTTCCTTTTTAGCCA-------------TCTCCCACATGG-
droSec2 scaffold_0:947226-947529 + CCGTTGTGCCGGCC------------------------CAGCTCAAGGAGACGCCGCTCAAAAGTGACCGTCGGGTAAGTGTCTTTC------------GAGAAAAATAT--GCCTC--------G---------------------------AA-----------A---------------AAAAATCCGAAGCCA---------------AAACC-AAAAA-CCACGTC-AATGGATTAA-ATCAGAACCTCT-AGT-TC-CCCGAAATC-------TG---------------------------T----------------------------------------GGATTAAATGAA---------------------------------------------------GCG-AA-------------------------CCAAACC-GAGAATTCCCCTAATTGAGAG----------------------------------------------CCACCCACTTCGAGCTCGAGTTGATTTCCATTCGCGA---------------CTGTGGGCGA---------------CTGGCCCCATCAATCCC------GCTGCCCAAATGCATTTCCTTTTTAGCCA-------------TCTCCCACATGG-
droYak3 3L:3242283-3242591 - CCGTTGTGCCGGCC------------------------CAGCTCAAGGAGACGCCGCTCAAAAGTGACCGTCGGGTAAGTGTCTATC------------GAGTAAACTAA--G-CTC--------G---------------------------AA-----------A---------------A---------ACCCA---------------AAACCCCAAAACCTCCCGC-AATGGATTAA-ATCAGAACCGCT-GGT-TCCCCCGAAATC-------TG---------------------------T----------------------------------------GGATTAAATGAA---------------------------------------------------CCG-AA---------------GCAAACCAAACCAAATC-GAGAATTCCCCTAATTGAGAG----------------------------------------------CCACCCACTTCGAGCTCAAGTTGATTTCCATTCGCGA---------------CTGTGGGCGG--C----------GACTGGCCCCATCAATCCC------GCTGCCCAAATGCATTTCCTTTTTAGCCA-------------TCTCCCACATG--
droEre2 scaffold_4784:5376107-5376419 - CCGTCGTGCCGGCC------------------------CAGCTCAAGGAGACGCCGCTCAAAAGTGACCGTCGGGTAAGTGTCTTTC------------GAGAAAAGCAG--G------------------------------------------CAATGAAA-----------------------------AGCCA---------------AAT-C-AAAAGCCCCCCAC-AATGGATTAA-ATCAGAACCCCT-AGT-TC-CCCGAAATC-------TG---------------------------T----------------------------------------GGATTAAATAAA---------------------------------------------------CCG-AA-----CCGAACTAAATCAAACCAAGCCAAACC-GAGAATTCCCCTAATTGAGAG----------------------------------------------CCACCCACTTCGAGCTCAAGTTGATTTCCATTTGCGA---------------CTGTGGGCGA---------------CTGGCCCCATCAATCCC------GCTGCCCAAATGCATTTCCTTTTTAGCCA-------------TCTCCCACATG--
dp5 XR_group8:8927556-8927835 - CTGTGGTGCCAGCACAGACCCAGCAGCAGCAGCAGCAGCAGCACAAGGAGACGCCACTCAAAAGTGATCGTCGGGTAAGTGTCTACCACC--------------------------CC---------------------CCCTTTGCCCCAAC--CAAAAAAAGAGAG--AAAC---G----------------------------------------------------------------------------------TT-CT-----------------------------------------------------------------------------TTGGCGTGGATTACATTTTGAG----------------------------------------------------------------------------------------A-GATTCTGTTAATTGGGAGACGACACCGACAACGACACCGACACCCACCAGAG------------CCGC----------------TCGCTTAGCATCGCCCACTATGCC--------C-------------------------TGG-----------CG------GCTGCCCAAATGCATTTCCTTTTTGGCCGCG-----------TCTCCCACATGG-
droPer2 scaffold_50:278371-278649 + CTGTGGTGCCAGCACAGACGCAGCAGCAGCAGCAGCAGCAGCACAAGGAGACGCCACTCAAAAGTGATCGTCGGGTAAGTGTCTACCACC--------------------------CC---------------------CCCTTTGCCCCAAC--CAAAAA-AGAGAG--AAAC---G----------------------------------------------------------------------------------TT-CT-----------------------------------------------------------------------------TTGGCGTGGATTACATTTTGAG----------------------------------------------------------------------------------------A-GATTCTGTTAATTGGGAGACGACACCGACAACGACACCGACACCCACCAGAG------------CCGC----------------TCGCTTAGCATCGCCCACTATGCC--------C-------------------------TGG-----------CG------GCTGCCCAAATGCATTTCCTTTTTGGCCGCG-----------TCTCCCACATGG-
droWil2 scf2_1100000004511:8219639-8219979 - CCGTAGTGCCCACC------------------------CAGCTAAAGGAGACGCCGCTCAAAAGTGATCGTCGGGTAAGTGTTCAAAAA---------------C--------------------------------------------------CAAAAAAA-AAAA--AAAC----------------------------------------------------------------------TAAAA---------A-AT-CCCAAAAAAAA---AACA---------------------------TGGACTACACAAAAACACAGAGAGAACTATTCCCTTGGCGCAATC------T--AGAAAACTTTTCACTCCAAAGA--------------------AAAAAAAAACACCAACA------------------------------------------------------------------TATTCAACACCTACAAGAATTTTTTTTCGAAAC-------------------ATTTTTACATCTCCCACT-TGTCCACACACAC-ATGGGAATCGCCCA--CAGTT--G-AGCCCAATCAATCCC------GCTGCCCAAATGCATTTCCTTTTTGGCCACATGTAGTAAATAT---GTACATGTG
droVir3 scaffold_13049:6325063-6325166 + CTGTCGTCTCCACGCAG---CAACAGCAGCAGCAGCAGCAGCACAAGGAGGCGCCAATCAAAAGCGATCGTCGGGTAAGTGTT----------------GAGAAAGACAA--C------------------------------------------CAAAAAAAAAGA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droMoj3 scaffold_6680:4639962-4640020 + CCGTGGTGCCCACC------------------------CAGCTGAAGGAGACACCCATCAAGAGTGACCGCAGGGTAAGTGTC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droGri2 scaffold_14662:1219-1352 + CTGTGGTGCCCACC------------------------CAGCTCAAGGAGACCCCCATCAAAAGCGATCGTCGGGTAAGTGTTAAAACA---------------AAA--------------------------------------------------C------AAAAAA----------ACAAAA---------------------------------------------------------ATCAAAAACCAA-A----------AAGAA-------TA---------------------------A----------------------------------------GAAATAAACGCC---------------------------------------------------AAA-AG-------------------------TTAAATT-GGAAATT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------G-

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droAna3
CTGTGGTGCCCGCC------------------------CAGCTTAAGGAAACGCCACTCAAAAGTGACCGTCGGGTAAGTGTCTTCTCCA--------------------------CCTCCTCCCAAAAAAAAAA----------------------C------CGAA--AAAC--------------------------------------------------------------------------------T-AGA-TT-CCCTAAAACAG---A----------------------GACCCACTT----------------------------------------GGATTAAAATAA------------------------------------------------------------------------------------AAGCT-GAGAATTCCCTTAATTGAGAATCG----------------------------CTT------------ACACCCACT------TGGAGTCGATTT------------------------------AGCGA---------------C------------ACCC------ACTGGCCAAATGCATTTCCTTTTTGGCCACAACGCGCACACTTCTCCCACATGCGSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
...................................................CGCCACTCAAAAGTGACCGTCGGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001100000
...................................................CGCCACTCAAAAGTGACCGTCGGTCC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001001000
............CC------------------------CAGCTTAAGGAAACGCCACT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000001
.............................................................................................................................AAAAAAAAAA----------------------C------CGAA--AAA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.051010000
droBip1
CTGTGGTGCCCGCC------------------------CAGCTTAAGGAGACGCCACTCAAAAGTGACCGTCGGGTAAGTGTCTTCTCC--------------------------TG---CTCCCCAAAAAA--------------------------------AGAC--AAAC--------------------------------------------------------------------------------T-AGA-TT-CCCTAAAACAG---A----------------------GACCCACTT----------------------------------------GGATTAAAATAA------------------------------------------------------------------------------------AAGCT-GAGAATTCCCTTAATTGAGAA----------------------------------------------TCACTTACACCCACTTCGAGTCGATTTA------------------------------ACGA---------------C------------ACCC------ACTGGCCAAATGCATTTCCTTTTTGGCCACAACGCGCACACTTCTCCCACATGCGSizeHit CountTotal NormTotal
No Reads
droKik1
CCGTGGTGCCCGCC------------------------CAGCTCAAGGAAACGCCGCTCAAAAGTGACCGTCGGGTAAGTGTCTTCCCCA--------------------------CC-------AAAAAAAAGAACGTCCCTATCCCCCAAA--------------------------------------------------------TTTA------------------------------------AACCAA-G----------TCGGA--TAAAATAGGCGCTAAGAGCTGGATTAGAA----------------------------------------TCGCTTGAATTAAATATTCAGA---------GCTCCCAAAAAAATTAAAATATATATCTTAAAAAAGAAACGCCACCAATCCGGATTAAA------------GCGCT-CAGAATTCCCTTAATTGAGCA----------------------------GCACTG------------CCTCCCACTTCGCACTC-----GATTTCCAGACTCG----------------CTGTGGGCGA---------------GCAGCCCCATCAATCCCGGTGCCGCTGCCCAAATGCATTTCCTTTTTGGCCG-------------TCTCCCACATG--SizeHit CountTotal NormTotal
No Reads
droFic1
CCGTTGTTCCGGCC------------------------CAGCTCAAGGAGACGCCGCTCAAAAGTGACCGTCGGGTAAGTGTCTTCCCCA----------AAAAAAA-AA---------------G---------------------------AA-----------A---------------AAAAATCTGAAAG--AGGGGGGC---C-------------------TCC-AATGGATTAA-ATCAGCAGTCAA-ATA-TT-CCCGGAAAA-------AA---------------------------T----------------------------------------GGATTAAATAA---------------------------------------------------------------------------------------ACC-GAGAATTCCCTTAAACGAGAG----------------------------------------------CCAACCACTTCGAGCTCGAATTGATTTCCAAACGCC----------------TTGTGGGCGA--CGC---GT--T--GCGGCCCCATCAATCCC------GGTGCCCAAATGCATTTCCTTTTTAGCCA-------------TCTCCCACATGCGSizeHit CountTotal NormTotal
No Reads
droEle1
CCGTGGTGCCGGCC------------------------CAGCTCAAGGAGACGCCGCTGAAAAGTGACCGTCGGGTAAGTGTCTTTTCTACGGCAAACCGAAGAATAAACAA--CTC---CC----------------------------------------------------------------------------------C---C------------------TCG-AAATGGATTAA-AAAAAAACCAAATAGA-AC-CCAGAAAAA-------TA---------------------------T----------------------------------------GGATTAAACCA---------------------------------------------------------------------------------------GCCAAGAAATTCCCTTAAATGAGAG----------------------------------------------CCACCCACTTCGAGCTCGACTTGATTTCCATATGCCA-TATGCC--------TTGTGGGCGA---------------CTGGCCCCATCAATCCC------GCTGCCCAAATGCATTTCCTTTTTAGCCA-------------TCTCCCACATGGCSizeHit CountTotal NormTotal
No Reads
droRho1
CCGTGGTGCCGGCC------------------------CAGCTCAAGGAGACGCCGCAGAAAAGTGACCGTCGGGTAAGTGTCTTCCCT----------GGGAAA-------------------------------------------------------------------------------AAATCTTGAACCAA----CCC---C------------------TC-CAAATGGATTAAAATCAGAACCCAA-AGT-TCCCCCGAAAATAA---AAAC---------------------------T----------------------------------------GGATTAAATTAA---------------------------------------------------------------------------------------AT-GAGAATTCCCTTAAATGAGAG----------------------------------------------CCACCCACTTCGAGCTCAACTTGATTTCCATATGCC----------------TTGTAGGCGG---------T--CGACTGGCCCCATCAATCCC------GCTGCCCAAATGCATTTCCTTTTTAGCCA-------------TCTCCCACATG--SizeHit CountTotal NormTotal
No Reads
droBia1
CCGTTGTGCCGGCC------------------------CAGCTCAAGGAGACGCCGCTCAAGAGTGACCGTCGGGTAAGTGTCCGCTCC----------GGGGAGTACAGAG--TTC---CCCCC----------------------------------------------AACCACATT----------------------CCC---C------------------TCGCAAACGGATTAA-GCCAGAACCCGA-AGT-------------------------------------------------T----------------------------------------GGAT----------------------------------------------------------------------------------------------ACCAGGGAATGCCCTTAAACGAGGG----------------------------------------------CCACCCACCTCCGGCGCGACTTGATTTCCACACTCG----------------CTGTGGGCGA--CCCA--GC--G--CCGTCCCCATCAATCCC------GCTGCCCAAATGCATTTCCTTTTTAGCCA-------------TCTCCCACATGG-SizeHit CountTotal NormTotal
No Reads
droTak1
CCGTTGTGCCGGCC------------------------CAGCTGAAGGAGACGCCGCTGAAAAGTGACCGTCGGGTAAGTGTCTAAGCC--------------------------TCC---T----------------------------------------------------------------------------------C---C------------------TCA-AAACGGATTAA-ATCAGAGCCCCC-----TA-CCAGTAAAA-------AA---------------------------T----------------------------------------GGATTAAATATA---------------------------------------------------------------------------------------GC-CAGAATTCCCTTAAACGAGAGCT---------------------------------------------CACCAACT-------------------------C-A---------------CTGTGGGCGA--CTCTGAGT--GGCCTGTCCCCATCAATCCC------GCTGCCCAAATGCATTTCCTTTTTAGCCATG---C-----CATCTCCCACATG--SizeHit CountTotal NormTotal
No Reads
droEug1
CCGTTGTGCCGGCC------------------------CAGCTCAAGGAGACGCCGATCAAAAGTGACCGTCGGGTAAGTGTCTTCTTT----------GAGAAAAACA--------------------------------------------------------------------------AAAATCCCAAAC--A----CTCCTCCATCAAACC-AA-----------AAATGGATTAA-ATCAGAACCTCT-AGAGTC-ATCGAAAAA------AAA---------------------------T----------------------------------------GGATTAAATAA---------------------------------------------------------------------------------------GCC-GAGAATTCCCTTAAATGAGAGCTG-------------------------------------------CCACCCACTTCCAGCTCGACTTGATTTTGAAAC-----TTTGC---------CTGTGGGCGA---------------CTGGCCCCATCAATCCC------GCTGCCCAAATGCATTTCCTTTTTAGCCA-------------TCTCCCACATG--SizeHit CountTotal NormTotal
No Reads
dm3
CCGTTGTGCCGGCC------------------------CAGCTCAAGGAGACGCCGCTCAAAAGTGACCGTCGGGTAAGTTTCTTTC------------GAGAAAAATAA--GACTC--------G---------------------------AA-----------A-------------AAAAAAATCCAAAGCCA---------------AAAAC-AAAAAACCCCGTC-AATGGATTAA-ATCAGAACCTCT-AGT-TC-CCCGAAATC-------TG---------------------------T----------------------------------------GGATTAACTGAA---------------------------------------------------GCG-AA-------------------------CCAAACC-GAGAATTCCCCTAATTGAGAG----------------------------------------------CCACCCACTTCGAGCTCAAGTTGATTTCCATTCGCGA---------------CTGTGGGCGA---------------CTGGCCCCATCAATCCC------GCTGCCCAAATGCATTTCCTTTTTAGCCA-------------TCTCCCACATGG-SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
........................................................CTCAAAAGTGACCGTCGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18115.001500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000015000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................GCCGCTCAAAAGTGACCG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18112.00120000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000010070000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................GCTCAAAAGTGACCGTCGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1916.0060000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000102000000000000000000000000
.........................................................TCAAAAGTGACCGTCGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1715.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................GCCGCTCAAAAGTGACCGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1914.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................GACGCCGCTCAAAAGTGACCG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000
.CGTTGTGCCGGCC------------------------CAGCTCAAGGAGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................GCCGCTCAAAAGTGACCGTCGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2213.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000
.........................................................................................................................................................................................................................................................ACCTCT-AGT-TC-CCCGAAA...................................................................................................................................................................................................................................................................................................................................................................................................................1813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................GACGCCGCTCAAAAGTGACCGTCG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000001000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTAATTGAGAG----------------------------------------------CCACCCACT..................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................T----------------------------------------GGATTAACTGAA---------------------------------------------------GCG-AA-------------------------C.....................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................GTAAGTTTCTTTC------------GAGAAAAATAA--GAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............CC------------------------CAGCTCAAGGAGACGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTCCCCTAATTGAGAG----------------------------------------------CCACCCA....................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................GCTCAAAAGTGACCGTCG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
..........GGCC------------------------CAGCTCAAGGAGACGCCGCTCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCATTCGCGA---------------CTGTGGGCGA---------------CTGGCCC.......................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................GT-TC-CCCGAAATC-------TG---------------------------T----------------------------------------GGATTAA.............................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.CGTTGTGCCGGCC------------------------CAGCTC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTCCATTCGCGA---------------CTGTGGGCGA---------------CTGGC.........................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....TGTGCCGGCC------------------------CAGCTCAAGGAGACGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTGAGAG----------------------------------------------CCACCCACTTCGA..............................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................CAGCTCAAGGAGACGCCGCTCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................AATCCAAAGCCA---------------AAAAC-A......................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................AA---------------------------------------------------GCG-AA-------------------------CCAAACC-GAGA..........................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................ACGCCGCTCAAAAGTGACCG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................CAAGGAGACGCCGCTCAAAAGTGACCGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGA---------------CTGTGGGCGA---------------CTGGC.........................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCCACTTCGAGCTCAAGTTGATTTCC..............................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
................................................................TGACCGTCGGGTAAGTTTCT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................CAAGGAGACGCCGCTCAAAAGTGACC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
............CC------------------------CAGCTCAAGGAGACGCCGCTC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................ATC-------TG---------------------------T----------------------------------------GGATTAACTGA.........................................................................................................................................................................................................................................................................................................................1711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCATTCGCGA---------------CTGTGGGCGA---------------CTGGC.........................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................CTCAAGGAGACGCCGCTCAAAAGTGACC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000
....................................................GCCGCTCAAAAGTGACCGTCGGGTA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTTCCATTCGCGA---------------CTGT...................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................GCCGCTCAAAAGTGACCGTCGGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATGCATTTCCTTTTTAGC............................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...........GCC------------------------CAGCTCAAGGAGACGCC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCATTCGCGA---------------CTGTGGG................................................................................................1711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................AGACGCCGCTCAAAAGTG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCGCGA---------------CTGTGGGCGA---------------CTGGC.........................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........CCGGCC------------------------CAGCTCAAGGAGACGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...............................................GAGACGCCGCTCAAAAGTGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................AACTGAA---------------------------------------------------GCG-AA-------------------------CCAAACC-GAG...........................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000
.....................................................CCGCTCAAAAGTGACCGTCGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................CGCCGCTCAAAAGTGACCGTCGGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................CAGCTCAAGGAGACGCCGCTCAAA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCGCGA---------------CTGTGGGCGA---------------CTGGCCC.......................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................AATCCAAAGCCA---------------AAAAC-AAAAAACCC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................CAGCTCAAGGAGACGCCGCTCAAAAGTGAC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......GCCGGCC------------------------CAGCTCAAGGAGACGCCG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................C-------TG---------------------------T----------------------------------------GGATTAACTGAA---------------------------------------------------GCG-AA-------------------------CC....................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................GT-TC-CCCGAAATC-------TG---------------------------T----------------------------------------GG..................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................GCTCAAAAGTGACCGTCGGTCG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2220.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................TCAAAAGTGACCGTCGT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1730.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
CCGTTGTGCCGGCC------------------------CAGCTCAAGGAGACGCCGCTCAAAAGTGACCGTCGGGTAAGTGTCTTTC------------GAGAAAAATAT--GCCTC--------G---------------------------AA-----------A---------------AAAAATCCGAAACCA---------------AAACC-AAAAACCCCCGTC-AATGGATTAA-ATCAGAACCTCT-AGT-TC-CCCGAAATC-------TG---------------------------T----------------------------------------GGATTAAATGAA---------------------------------------------------GCG-AA-------------------------CCAAACC-GAGAATTTCCCTAATTGAGAG----------------------------------------------CCACCCACTTCGAGCTCGAGTTGATTTCCATTCGCGA---------------CTGTGGGCGA---------------CTGGCCCCATCAATCCC------GCTGCCCAAATGCATTTCCTTTTTAGCCA-------------TCTCCCACATGG-SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.....................................................................................................................................................................................................................................TC-AATGGATTAA-ATCAGAACCT....................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00110000000000000000
...............................................................................................................................................................................................................................................................................C-------TG---------------------------T----------------------------------------GGATTAAATGAA---------------------------------------------------GC...................................................................................................................................................................................................................................................................1811.00100100000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTCCATTCGCGA---------------CTGTGGGCGA---------------CT............................................................................2611.00100100000000000000
..................................................ACGCCGCTCAAAAGTGACCGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000000000000000
.......GCCGGCC------------------------CAGCTCAA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1511.00100000000100000000
...............................................................................TGTCTTTC------------GAGAAAAATAT--GC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000100000000000
.............................................AGGAGACGCCGCTCAAAAGTGACCGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100100000000000000
droSec2
CCGTTGTGCCGGCC------------------------CAGCTCAAGGAGACGCCGCTCAAAAGTGACCGTCGGGTAAGTGTCTTTC------------GAGAAAAATAT--GCCTC--------G---------------------------AA-----------A---------------AAAAATCCGAAGCCA---------------AAACC-AAAAA-CCACGTC-AATGGATTAA-ATCAGAACCTCT-AGT-TC-CCCGAAATC-------TG---------------------------T----------------------------------------GGATTAAATGAA---------------------------------------------------GCG-AA-------------------------CCAAACC-GAGAATTCCCCTAATTGAGAG----------------------------------------------CCACCCACTTCGAGCTCGAGTTGATTTCCATTCGCGA---------------CTGTGGGCGA---------------CTGGCCCCATCAATCCC------GCTGCCCAAATGCATTTCCTTTTTAGCCA-------------TCTCCCACATGG-SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
...................................................CGCCGCTCAAAAGTGACCGTCG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.0020110
.......................................AGCTCAAGGAGACGCCGCTC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100
...........GCC------------------------CAGCTCAAGGAGACGCC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010001
........................................GCTCAAGGAGACGCCGCTCAAA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100
....................................................GCCGCTCAAAAGTGACCG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010010
droYak3
CCGTTGTGCCGGCC------------------------CAGCTCAAGGAGACGCCGCTCAAAAGTGACCGTCGGGTAAGTGTCTATC------------GAGTAAACTAA--G-CTC--------G---------------------------AA-----------A---------------A---------ACCCA---------------AAACCCCAAAACCTCCCGC-AATGGATTAA-ATCAGAACCGCT-GGT-TCCCCCGAAATC-------TG---------------------------T----------------------------------------GGATTAAATGAA---------------------------------------------------CCG-AA---------------GCAAACCAAACCAAATC-GAGAATTCCCCTAATTGAGAG----------------------------------------------CCACCCACTTCGAGCTCAAGTTGATTTCCATTCGCGA---------------CTGTGGGCGG--C----------GACTGGCCCCATCAATCCC------GCTGCCCAAATGCATTTCCTTTTTAGCCA-------------TCTCCCACATG--SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
...................................................CGCCGCTCAAAAGTGACCGTCGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2316.00600000000006
......................................................CGCTCAAAAGTGACCGTCGGGTAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2514.00400000000004
...................................................CGCCGCTCAAAAGTGACCGTC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2113.00303000000000
....................................................GCCGCTCAAAAGTGACCGTC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.00202000000000
.................................................GACGCCGCTCAAAAGTGACCGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000010000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCAATCCC------GCTGCCCAAAT............................................2011.00100100000000
...........................................CAAGGAGACGCCGCTCAAAAGTGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000010000
........................................GCTCAAGGAGACGCCGCT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00101000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................AA---------------GCAAACCAAACCAAATC-GA............................................................................................................................................................................................................................2111.00101000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GA---------------CTGTGGGCGG--C----------GACTGGCCCCA.....................................................................2411.00100100000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTTCCATTCGCGA---------------CTGTGGGCGG--C----------................................................................................2611.00100000010000
.................................................GACGCCGCTCAAAAGTGACCGTC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00101000000000
...........................................................................................................................................................................................................................................GGATTAA-ATCAGAACCGCT-GGT-.............................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000010000
..........GGCC------------------------CAGCTCAAGGAGACGCC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000000000
....TGTGCCGGCC------------------------CAGCTCAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00101000000000
...................................................CGCCGCTCAAAAGTGACCGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00101000000000
droEre2
CCGTCGTGCCGGCC------------------------CAGCTCAAGGAGACGCCGCTCAAAAGTGACCGTCGGGTAAGTGTCTTTC------------GAGAAAAGCAG--G------------------------------------------CAATGAAA-----------------------------AGCCA---------------AAT-C-AAAAGCCCCCCAC-AATGGATTAA-ATCAGAACCCCT-AGT-TC-CCCGAAATC-------TG---------------------------T----------------------------------------GGATTAAATAAA---------------------------------------------------CCG-AA-----CCGAACTAAATCAAACCAAGCCAAACC-GAGAATTCCCCTAATTGAGAG----------------------------------------------CCACCCACTTCGAGCTCAAGTTGATTTCCATTTGCGA---------------CTGTGGGCGA---------------CTGGCCCCATCAATCCC------GCTGCCCAAATGCATTTCCTTTTTAGCCA-------------TCTCCCACATG--SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.....................................................CCGCTCAAAAGTGACCGTCGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21119.001900000019
..GTCGTGCCGGCC------------------------CAGCTCAAGGAGACGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2817.0070000007
.......GCCGGCC------------------------CAGCTCAAGGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000010
...........................................CAAGGAGACGCCGCTCAAAAGTGACCGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0011000000
...................................................CGCCGCTCAAAAGTGACC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0011000000
.............................................................................................................................................................................................................................................................................ATC-------TG---------------------------T----------------------------------------GGATTAAATAAA---------------------------------------------------CCG-.................................................................................................................................................................................................................................................................2111.0010001000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGTTGATTTCCATTTGCGA---------------CT.....................................................................................................2211.0010000010
................................................AGACGCCGCTCAAAAGTGACCGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000100
......................................................CGCTCAAAAGTGACCGTCGGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0011000000
......................................CAGCTCAAGGAGACGCCGCTCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0011000000
dp5
CTGTGGTGCCAGCACAGACCCAGCAGCAGCAGCAGCAGCAGCACAAGGAGACGCCACTCAAAAGTGATCGTCGGGTAAGTGTCTACCACC--------------------------CC---------------------CCCTTTGCCCCAAC--CAAAAAAAGAGAG--AAAC---G----------------------------------------------------------------------------------TT-CT-----------------------------------------------------------------------------TTGGCGTGGATTACATTTTGAG----------------------------------------------------------------------------------------A-GATTCTGTTAATTGGGAGACGACACCGACAACGACACCGACACCCACCAGAG------------CCGC----------------TCGCTTAGCATCGCCCACTATGCC--------C-------------------------TGG-----------CG------GCTGCCCAAATGCATTTCCTTTTTGGCCGCG-----------TCTCCCACATGG-SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
..............................................GGAGACGCCACTCAAAAGTGATCGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010100000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGCATTTCCTTTTTGGCCGCG-----------TCTC.........2611.0010100000000
..................................GCAGCAGCACAAGGAGACGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
......................................................CACTCAAAAGTGATCGTCGGTC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100000000
.............ACAGACCCAGCAGCAGCAGCAGCAGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010100000000
...........................AGCAGCAGCAGCAGCACAAGGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2230.3310100000000
................GACCCAGCAGCAGCAGCAGCA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2140.2510100000000
....................CAGCAGCAGCAGCAGCAGCAGCACA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25120.0810100000000
droPer2
CTGTGGTGCCAGCACAGACGCAGCAGCAGCAGCAGCAGCAGCACAAGGAGACGCCACTCAAAAGTGATCGTCGGGTAAGTGTCTACCACC--------------------------CC---------------------CCCTTTGCCCCAAC--CAAAAA-AGAGAG--AAAC---G----------------------------------------------------------------------------------TT-CT-----------------------------------------------------------------------------TTGGCGTGGATTACATTTTGAG----------------------------------------------------------------------------------------A-GATTCTGTTAATTGGGAGACGACACCGACAACGACACCGACACCCACCAGAG------------CCGC----------------TCGCTTAGCATCGCCCACTATGCC--------C-------------------------TGG-----------CG------GCTGCCCAAATGCATTTCCTTTTTGGCCGCG-----------TCTCCCACATGG-SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.................................................GACGCCACTCAAAAGTGATCGTCGGTC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001100000
............................GCAGCAGCAGCAGCACAAGGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2120.501010000
droWil2
CCGTAGTGCCCACC------------------------CAGCTAAAGGAGACGCCGCTCAAAAGTGATCGTCGGGTAAGTGTTCAAAAA---------------C--------------------------------------------------CAAAAAAA-AAAA--AAAC----------------------------------------------------------------------TAAAA---------A-AT-CCCAAAAAAAA---AACA---------------------------TGGACTACACAAAAACACAGAGAGAACTATTCCCTTGGCGCAATC------T--AGAAAACTTTTCACTCCAAAGA--------------------AAAAAAAAACACCAACA------------------------------------------------------------------TATTCAACACCTACAAGAATTTTTTTTCGAAAC-------------------ATTTTTACATCTCCCACT-TGTCCACACACAC-ATGGGAATCGCCCA--CAGTT--G-AGCCCAATCAATCCC------GCTGCCCAAATGCATTTCCTTTTTGGCCACATGTAGTAAATAT---GTACATGTGSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.................................................GACGCCGCTCAAAAGTGATCGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100100
.......................................AGCTAAAGGAGACGCCGCT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100100
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCGAAAC-------------------ATTTTTACATCTCC........................................................................................................................2211.00100010
......................................................................................................................................................................................................................................................................................ACA---------------------------TGGACTACACAAAAACACAGAGAG.....................................................................................................................................................................................................................................................................................................................................................2711.00101000
droVir3
CTGTCGTCTCCACGCAG---CAACAGCAGCAGCAGCAGCAGCACAAGGAGGCGCCAATCAAAAGCGATCGTCGGGTAAGTGTT----------------GAGAAAGACAA--C------------------------------------------CAAAAAAAAAGA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
...............................................................GCGATCGTCGGGTAAGTGTT----------------GAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2315.005000000000000000000000000000000000000000000000000000000000000005
.......................................AGCACAAGGAGGCGCCAATCAAAAGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000100000000000000000000000000000000000000000000000000000000000
..................................GCAGCAGCACAAGGAGGCGCC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
........................................GCACAAGGAGGCGCCAATCAAAA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000100000000000000000000000000000000000000000000000000000000000
..........................................ACAAGGAGGCGCCAATCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000000000000001000000000000000000000000000000000000000000000000
..............................AGCAGCAGCAGCACAAGGAGG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000001000000000000000000000000000000000
..........CACGCAG---CAACAGCAGCAGCA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000100000000000000000000000000
.............................CAGCAGCAGCAGCACAAGGAGGCGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000000000000000000000000000000000000000000000000000000000000010
...........................................CAAGGAGGCGCCAATCAAAAGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000100000000000000000000000000000000000000000000000
...........ACGCAG---CAACAGCAGCAGCAGCAGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2520.501000000000000000000000000100000000000000000000000000000000000000
...............AG---CAACAGCAGCAGCAGCA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.102000000000000000000000020000000000000000000000000000000000000000
................G---CAACAGCAGCAGCAGCAGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.102002000000000000000000000000000000000000000000000000000000000000
......................ACAGCAGCAGCAGCAGCAGCA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051000000000000000000000000000000010000000000000000000000000000000
..............CAG---CAACAGCAGCAGCAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.051000000000000000000000000100000000000000000000000000000000000000
droMoj3
CCGTGGTGCCCACC------------------------CAGCTGAAGGAGACACCCATCAAGAGTGACCGCAGGGTAAGTGTC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
............................................AAGGAGACACCCATCAAGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.002000002
....................................................ACCCATCAAGAGTGACCGCAGGTC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001100000
......................................CAGCTGAAGGAGACACCCATCAA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
droGri2
CTGTGGTGCCCACC------------------------CAGCTCAAGGAGACCCCCATCAAAAGCGATCGTCGGGTAAGTGTTAAAACA---------------AAA--------------------------------------------------C------AAAAAA----------ACAAAA---------------------------------------------------------ATCAAAAACCAA-A----------AAGAA-------TA---------------------------A----------------------------------------GAAATAAACGCC---------------------------------------------------AAA-AG-------------------------TTAAATT-GGAAATT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------G-SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/18/2015 at 04:45 AM