ID:

dan_2486

 Coordinate:

scaffold_13337:7908598-7908748 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

Flybase annnotation

CDS [Dana\GF10148-cds]; exon [dana_GLEANR_10104:7]; intron [Dana\GF10148-in]

No Repeatable elements found

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
GACGCCGAGCGTCGTCTGGCCGAGAAGGATGAGGAGATTGAGGCCATCCGGTAAGTCTATCCTTAGTCAATAATTCCAACCCCCCCTGGGAAGTTGCCTACGCCCCTGTCTTATACAAACAAACAAAATCAAGGCTGCTTTCCCTGCCAAAGCGGAAGCAACTGAAAAAAAAAATAAAACAAGAAGCAAGGTTCCTCGATTGGGGATCGAATGGGAAATCAATCGATAGTGTCTCGATCGCTGCCAACAGA
**************************************************(((((........(((.((((..(((((........))))).)))).))).........)))))..............((.((..(((((((.((.....)).))))))).)))).................(((......))).......************************************************** 		Read size # Mismatch Hit Count Total Norm Total M058
embryo
 V039
embryo
 M044
female body
 V105
male body		 V106
head
 V055
head
............CGTCTGGCCGAGAAGGATG............................................................................................................................................................................................................................ 19 0 1 1.00 1 0 0 0 1 0 0
GACGCCGAGCGTCGTCTGGCCGA.................................................................................................................................................................................................................................... 23 0 1 1.00 1 1 0 0 0 0 0
...............CTGGCCGAGAAGGATGAGGAGATTGA.................................................................................................................................................................................................................. 26 0 1 1.00 1 0 0 0 1 0 0
..CGCCGAGCGTCGTCTGGCCGA.................................................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0
...........................GATGAGGAGATTGAGGCC.............................................................................................................................................................................................................. 18 0 1 1.00 1 1 0 0 0 0 0
....................CGAGAAGGATGAGTAGATTGA.................................................................................................................................................................................................................. 21 1 1 1.00 1 0 1 0 0 0 0
...GCCGAGCGTCGTCTGGCCGAGAAGGAT............................................................................................................................................................................................................................. 27 0 1 1.00 1 1 0 0 0 0 0
..........GACGTCTGGCCCAGAAGGATGAGGAG....................................................................................................................................................................................................................... 26 2 1 1.00 1 0 1 0 0 0 0
............CGTCTGGCCGAGAAGGATGAGGA........................................................................................................................................................................................................................ 23 0 1 1.00 1 0 0 1 0 0 0
.......................GAAGGATGAGGAGATTGAGGCCAT............................................................................................................................................................................................................ 24 0 1 1.00 1 1 0 0 0 0 0
............CGTCTGGCCGAGAAGGATGA........................................................................................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0
..CGCCGAGCGTCGTCTGGCCGAGAAGG............................................................................................................................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0
.........................AGGATGAGGAGATTGAGGC............................................................................................................................................................................................................... 19 0 1 1.00 1 1 0 0 0 0 0
.................GGCCGAGAAGGATGAGGAGATTGAG................................................................................................................................................................................................................. 25 0 1 1.00 1 0 0 1 0 0 0
......................................................................................................................................................AGCAGACGCAAGTGAAAAAAAAAA............................................................................. 24 3 2 0.50 1 0 0 0 0 1 0
.....................................................................................ATGGGAAGTTGACTCCGCCC.................................................................................................................................................. 20 3 2 0.50 1 1 0 0 0 0 0
.................GGCCGAGAAGGATGAGAA........................................................................................................................................................................................................................ 18 1 2 0.50 1 0 1 0 0 0 0
............CATCTGGCCGAGCAGCATGAGG......................................................................................................................................................................................................................... 22 3 3 0.33 1 0 0 0 0 0 1
.....................................................................................................................................................AAGCAGACGCAAGTGAAAAAAA................................................................................ 22 3 5 0.20 1 0 0 0 0 1 0
.......................CGAGGATGAGGCGATTGAGGC............................................................................................................................................................................................................... 21 3 5 0.20 1 0 0 1 0 0 0
................................................................................................................ATACAAACAAAAAAAATCAA....................................................................................................................... 20 1 7 0.14 1 1 0 0 0 0 0
...................................................................................................................................................................GAAAAGAAAAATAAGACAAGA................................................................... 21 2 8 0.13 1 1 0 0 0 0 0
.....................................................................................................................................................................................................GATGGGCGATCGAACGGGAA.................................. 20 3 9 0.11 1 0 0 0 0 0 1
.................................................................................................................AACACACAAACAAAATCAAG...................................................................................................................... 20 2 20 0.10 2 0 0 2 0 0 0
...........................GCTGAGGAGATTGACCCCA............................................................................................................................................................................................................. 19 3 15 0.07 1 0 0 0 0 1 0
..............................................................TAAGCGAATAATTCCAACCC......................................................................................................................................................................... 20 3 16 0.06 1 0 0 0 0 0 1
.....................................................................................................................................................................................................GATTGGGGATCGGTTGGG.................................... 18 2 17 0.06 1 0 0 0 1 0 0
.................................................................ATCAATAATTCCCACCACCC...................................................................................................................................................................... 20 3 19 0.05 1 1 0 0 0 0 0
..............................................................................................................TTATACAAACAACCAAAAA.......................................................................................................................... 19 2 20 0.05 1 1 0 0 0 0 0
.....................................................................................................................................................................AAAAAAAAGTAAAAGAAGAAGCA............................................................... 23 2 20 0.05 1 0 0 0 1 0 0
......................................................................................................................................................................AAAAAAAATAAAACAAGCA.................................................................. 19 1 20 0.05 1 1 0 0 0 0 0

Anti-sense strand reads

CTGCGGCTCGCAGCAGACCGGCTCTTCCTACTCCTCTAACTCCGGTAGGCCATTCAGATAGGAATCAGTTATTAAGGTTGGGGGGGACCCTTCAACGGATGCGGGGACAGAATATGTTTGTTTGTTTTAGTTCCGACGAAAGGGACGGTTTCGCCTTCGTTGACTTTTTTTTTTATTTTGTTCTTCGTTCCAAGGAGCTAACCCCTAGCTTACCCTTTAGTTAGCTATCACAGAGCTAGCGACGGTTGTCT
**************************************************(((((........(((.((((..(((((........))))).)))).))).........)))))..............((.((..(((((((.((.....)).))))))).)))).................(((......))).......************************************************** 		Read size # Mismatch Hit Count Total Norm Total V055
head
 V105
male body		 M044
female body
 V106
head
 M058
embryo
.................................................................................................................ATGTTTGTGAGTTATAGTTC...................................................................................................................... 20 3 7 3.29 23 0 19 4 0 0
...............................................................................................................................TAGGTACGATGAAAGGGACGGT...................................................................................................... 22 3 1 2.00 2 2 0 0 0 0
...............................................................................................................................TAGTTCAGACGAAACGGAGGGT...................................................................................................... 22 3 1 1.00 1 1 0 0 0 0
.....................................................................................GACCCGTCAACAGATGGGGGGA................................................................................................................................................ 22 3 2 0.50 1 1 0 0 0 0
................................................................................................................TATGTTTGTGAGTTATAGTTC...................................................................................................................... 21 3 2 0.50 1 0 1 0 0 0
.........................................................................................................................TAGTTTTAGTTCCCCCGAAA.............................................................................................................. 20 3 20 0.45 9 0 0 9 0 0
.......................................................................................................................................................................................TTCGTTCGAAGGACCAAACC................................................ 20 3 9 0.44 4 0 2 0 2 0
.......................................................................................................................................................................................TTCGTTCGAAGGACCAAACCC............................................... 21 3 3 0.33 1 0 1 0 0 0
...............................................................................................................................TAGTTCTGAAGAAAGGCACGGT...................................................................................................... 22 3 3 0.33 1 1 0 0 0 0
........................................................................................................................TTAGTTTTAGTTCCCCCGAA............................................................................................................... 20 3 12 0.33 4 0 0 4 0 0
................................................................................................................................AGGTACGATGAAAGGGACGGT...................................................................................................... 21 3 4 0.25 1 1 0 0 0 0
.......................................................................................................................................................................................TTCGTTCTAAGGACCAAACC................................................ 20 3 4 0.25 1 0 1 0 0 0
.....................................................................TATTAAGGTAGGGGGGAATC.................................................................................................................................................................. 20 3 5 0.20 1 1 0 0 0 0
...........................................................................................................................GTTTTAGTTCCCCCGAAATG............................................................................................................ 20 3 10 0.20 2 0 0 2 0 0
................................................................................................................................AGGTACGAAGAAAGGGACGGT...................................................................................................... 21 3 6 0.17 1 1 0 0 0 0
................................................................................................................CATGTTTGTGTGTTATAGTTC...................................................................................................................... 21 3 7 0.14 1 0 1 0 0 0
........................................................................................................................TTAGTTTTAGTTCCCCCGAAA.............................................................................................................. 21 3 7 0.14 1 0 0 1 0 0
............................................................................................................................TTTTAGTTCCCCCGAAAAGG........................................................................................................... 20 3 16 0.13 2 0 0 0 0 2
.................................................................................................................ATGTTTGTGCGTTATAGTTC...................................................................................................................... 20 3 11 0.09 1 0 1 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droAna3 scaffold_13337:7908548-7908798 + dan_2486 GACGCCGAGCGTCGTCTGGCCGAGAAGGATGAGGAGATTGAGGCCATCCGGTAAGTCTA---------T-----------------------------------------------CCTTAG---T-CAATAATT----CCAA-CCCC-CCCTGGGAAGT----TGCCT------------------------------------------ACGCCCCTGTCTTAT------------ACA-----AAC-----------------AAACAAAATCAAG-------------------------GCTGCTTT-CCCTGCCAAAGCGGAAGCAACTG-A--AAAAA---AAAAT-AAAACA-AGAAGCAAGGTTCCT----CGATTGGGG-ATCGAAT-G----GGAAATCAATCGATAGTGTCT-----CGATCGCT--------------GCCAACAGA
droBip1 scf7180000396541:64949-65186 + GACGCCGAGCGTCGTCTGGCCGAGAAGGATGAGGAGATTGAGGCCATCCGGTAAGTGTA---------T-----------------------------------------------CCCTAA---T-CCACAATT----TCAA-CCCT-CCTTGGGAAGT----TGCCT------------------------------------------ACGTCTCTGACTTAT------------ACA-----AAC-----------------AAACAATATCAAG-------------------------GCTGCTTT-CCCTGCCAAAGCGGAAGCAACTG-A--AAAAA-----A-------------AGCAAGGTTCTT----CGATTGGGG-ATCGAAT-G----GGAAATCAATCGATAGTGCCT-----CGATCGCT--------------GCCAACAGA
droKik1 scf7180000302474:234082-234386 + GACGCCGAGCGTCGCCTGGCCGAGAAGGATGAGGAGATCGAGGCTATCCGGTAAGTTAT----------AGGACATAG--------T----------C-TGGGAAACGAAGCATAACTTTTGATAT-CGATAATC----ATAAATCCC--CCTTGGAAGT----AGCCC-------------------------------------------CGCCTCTGGCTCTCAA-------CTGACAGCGACAAC-----------------AGAC-----GAAGGTCGATCGCTG--------GGTT--GTTGTTTC-CTTAGCCAAAGCGGAAGCCCCCCCAAAA--AA-----CC--AAAATA-CAACGCAAGGCCCCG----TCTTTGGGGTACTGAGGGG----GGAAATCAATCGATTGATTCT-----CGATCGATC----TTC---ACTGCCAACA--
droFic1 scf7180000454078:712612-712661 + GAGATCGATCGCCGCATCCAGGAGAAGGAGGAGGAGTTCGAGAACACCCG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droEle1 scf7180000490579:557297-557346 - GAGATCGATCGCCGCATCCAGGAGAAGGAGGAGGAGTTCGAGAACACCCG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droRho1 scf7180000757775:6226-6502 + GATGCCGAGCGTCGTCTGGCCGAGAAGGATGAGGAGATCGAGGCCATCCGGTAAGTAAT----------TGATCAGAT--------A----------T-AGGGTA----------------------------CTTAAGTAAG-CCCC-CCTTGGGAAGT----AGCCCCC---A------------------------------------ACGCCACTGCCTCTCAA-------CTGACAGCGACAAC-----------------AGAC-----GAAGGTCGATCGCTG--------GGTT--GTCGCTTCCCCCTGCCAAAGCGGAAGCCCC---AAAA--AACCAAAAATAAAAACA-CCCCTCAAGGCCCCC----C-------------TAT-G----GGAAATCAATCGATTGATTCG-----CAATCGCTT----TCC---ACTGCCAACA--
droBia1 scf7180000301468:953364-953413 + GAGATCGACCGCCGCATCCAGGAGAAGGAGGAGGAGTTCGAGAACACCCG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droTak1 scf7180000415914:532185-532234 + GAGATCGATCGCCGCATCCAGGAGAAGGAGGAGGAGTTCGAGAACACCCG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droEug1 scf7180000408961:358558-358607 + GAGATCGACCGCCGCATCCAGGAGAAGGAGGAGGAGTTCGAGAACACCCG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
dm3 chr3L:8732063-8732319 - GACGCCGAGCGTCGTCTGGCCGAGAAGGATGAGGAGATCGAGGCCATTCGGTAAGTTAC----------TGACCAGGG--------A----------T-TGGTAA----------------------------CTAGAGTTAA-CCCCCTTTTTGGAAGT----AGCCCC-----------------------------------------ACGCCACTGCACCACGA-------GTGACAGCGAGAAC-----------------AGAC-----GAAGG----------------------TTTTCGTTTC-CCCTGCCAAAGCGGAAGTCCC---AAAA--AA-----AA--TAAACA-CCCCTCAAGGCCCC-------------------AAGGG----GGAAATTATTCGATTGATTCG-----CAATCGCTT----TC-GCAATTGCCAACA--
droSim2 3l:8521606-8521862 - dsi_13563 GACGCCGAGCGTCGTCTGGCCGAGAAGGATGAGGAGATCGAGGCCATTCGGTAAGTTAC----------TGACCAGGG--------A----------T-AGGGAA----------------------------CTAGCGTAAG-CCCCTCTTTTTGAAGT----AGCCCC-----------------------------------------ACGCCACTGCCCCACGA-------GTGACAGCGAGAAC-----------------AGAC-----GAAGG----------------------TTGTCGCTTC-CCCTGCCAAAGCGGAAGCCCC---AAAA--AA-----AG--TAAACA-CCCCTCAAGGCCCC-------------------AGGGG----GGAAATTATTCGATTGATTTC-----CAATCGCTT----TC-GCAATTGCCAACA--
droSec2 scaffold_0:1009657-1009913 - GACGCCGAGCGTCGTCTGGCCGAGAAGGATGAGGAGATCGAGGCCATTCGGTAAGTTAC----------TGACCAGGA--------A----------T-CGGGAA----------------------------CTAGCGTAAA-CCCCCCTTTTGGAAGT----AGCCCC-----------------------------------------ACGTCACTGCCCCACGA-------GTGACAACGAGAAC-----------------AGAC-----GAAGG----------------------TTGTCGCTTC-CCCTGCCAAAGCGGAAGCCCC---AAAA--AA-----AA--TAAACA-CCCCTCAAGGCCCC-------------------AAGGG----GGAAATTATTCGATTGATTCG-----CAATCGCTT----TC-GCAATTGCCAACA--
droYak3 3L:3178137-3178409 + GATGCCGAGCGTCGTCTGGCCGAGAAGGATGAGGAGATCGAGGCCATTCGGTAAGTCAC----------TGATCGGGG--------A----------T-GGGAAA-------------------------CAACTTGAATTAGATCCCCTTTTTGGAAGT----AGCCCC-----------------------------------------ACGCCACTGCCATGCGA-------GTGACAGCGAGAAC-----------------AGAC-----GAAGG----------------------TTTTCGCTTC-CCCTGCCAAAGCGGAAGTCGC---GAAAAAG----AAAACACAAACA-CCAATCAAGGCCCC-------------------AAGGGGGAGGGTAATTATTCGATTGATTCGCTTTCCAATCGCTT----TCC---ACTGCCAACA--
droEre2 scaffold_4784:5310677-5310932 + GACGCCGAGCGTCGTCTGGCCGAGAAGGATGAGGAAATCGAGGCCATCCGGTAAGCTAC----------TGCTCAGGG--------A----------TCAGGGAA----------------------------CTAGAGTAAG-CCCCCCTTTTGGAAGT----AGCCCC-----------------------------------------ACGCCACTGCCTCGCGA-------GTGACAGCGAGAAC-----------------AGAC-----GAAGG----------------------TTTTCGCTTCCCCTTGCCAAAGCGGAAGCCCC---AAGA--A------AA--TAAACA-CCCCTCAAGGCCCC-------------------AAGGG----GGAAACTATTCGATTGATTCG-----CAATCGCTT----TCC---ACTGCCAACA--
dp5 XR_group8:8857943-8858211 + GATGCCGAGCGTCGTCTGGCCGAGAAGGATGAGGAGGTTGAGGCTATTCGGTAAGTAAT----------TGTCT---------------------GATCAT---------------CC-------TC---------------GATC---CCCTTGGAAGTGCCCAGCCCCCTGAAATGC-----------------------------GC-ACTCCTCTGTC--------------TGACAGCGACA---GTCGACAACTGTCGATTGAC-----GAAGGTCAATCACTT--------ATTG--GCAGTTTC-CCCTGCCAAAGCGGAAGCCC------------------------ACAGTCCCCCAAGGCCCCCGATACGAGTG----------GGG----GAAAACCAATCGATTGTTTTG-----CAATCGCTG----C----------CAATTGC
droPer2 scaffold_50:348092-348360 - GATGCCGAGCGTCGTCTGGCCGAGAAGGATGAGGAGGTTGAGGCTATTCGGTAAGTAAT----------TGTCT---------------------GATCAT---------------CC-------TC---------------GATC---CCCTTGGAAGTGCCCAGCCCCCTGAAATGT-----------------------------GC-ACTCCTCTGTC--------------TGACAGCGACA---GTCGACAACTGTCGATTGAC-----GAAGGTCAATCACTT--------ATTG--GCAGTTTC-CCCTGCCAAAGCGGAAGCCC------------------------ACAGTCCCCCAAGGCCCCCGATA-GAGTG----------GGG---GGAAAACCAATCGATTGTTTTG-----CAATCGCTG----C----------CAATTGC
droWil2 scf2_1100000004511:8124942-8125206 + GATGCCGAGCGTCGTCTGGCCGAGAAGGATGAGGAAATTGAGGCTATTCGGTAAGTCGG---------T-----------------------------------------------TTTTCC---TT---------------C--T-CTCTCTTGC-ATT----TTCTTC--A-ATCAACGCCAAAACAAACAACGATTGGAAGTGGCCCAAAAAAATTAA----AGGGAAAAAGCAAATAACAACAATAGACGAC--------------------AAGGCCAATCAGTTTAATGTAC----ATATTGTTTC-CTCTGCCAAAGCGGAAGCCCCT-------------------------------------------------------------GAA----CGAAATCAATCGATTGCTTTT--TTGCAATCGATC----TT----------AATTCT
droVir3 scaffold_13049:6395238-6395331 - GATGCCGAGCGTCGTCTGGCCGAGAAGGACGAAGAAATTGAGGCTATTCGGTAAGTGTC----------------------------------------AAGCTA----------------------------CTAAGACCCC-TCCTGCTTGTGGAAGT----TGC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droMoj3 scaffold_6680:4714965-4715201 - GACGCCGAGCGTCGTCTGTCCGAGAAGGATGAGGAGATTGAGGCTATTCGGTAAGTGTG---------CTAACCACCTATACATTCAATGGGTTCGATCGT---------------C--------TC---------------G--CCC-CCTGGGGAAGT----TGCCTC--T-GTGAA-----------------------------CG-ACGCCGCTGGCAC---------------------------------------------------AAACC----------------------TTGCGGCTAG-CTCTGCCAAAACGGAAGTGATT--------------------------CGATTCAATGCAGTC------------------AA--T----GCAAGTCAATCGATTGATTTG-----CAATCGTCGGCTAGCC---GTTGCCAA----
droGri2 scaffold_15110:6348815-6349045 + GACGCCGAGCGTCGTCTGGCCGAGAAGGATGAGGAAATTGAGGCTATTCGGTAAGTGAATTGACACAA--AGACACACACACAGACA----------C-AGAGT---------------TTC---CT---------------G--T-CTCCCTTGGAAGT----TGCCTC--TAGTTGT-----------------------------CG-ACGCCTCTGGCA--------------GA---------------------------------------CC----------------------TTGTGTCTTG-CGCTGCCAAATCGGAAGCATT---------------------------------------------------CGGG---CCAATGC----GAAAGTCAATCGATTGATTTG-----CAATCGTCG-CTGGCTGCAATTGCCAA----

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droAna3
GACGCCGAGCGTCGTCTGGCCGAGAAGGATGAGGAGATTGAGGCCATCCGGTAAGTCTA---------T-----------------------------------------------CCTTAG---T-CAATAATT----CCAA-CCCC-CCCTGGGAAGT----TGCCT------------------------------------------ACGCCCCTGTCTTAT------------ACA-----AAC-----------------AAACAAAATCAAG-------------------------GCTGCTTT-CCCTGCCAAAGCGGAAGCAACTG-A--AAAAA---AAAAT-AAAACA-AGAAGCAAGGTTCCT----CGATTGGGG-ATCGAAT-G----GGAAATCAATCGATAGTGTCT-----CGATCGCT--------------GCCAACAGASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
............CGTCTGGCCGAGAAGGATG.............................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000010
GACGCCGAGCGTCGTCTGGCCGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001010000
...............CTGGCCGAGAAGGATGAGGAGATTGA...................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000010
..CGCCGAGCGTCGTCTGGCCGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001010000
...........................GATGAGGAGATTGAGGCC...............................................................................................................................................................................................................................................................................................................................................................................................................................1811.001010000
...GCCGAGCGTCGTCTGGCCGAGAAGGAT..............................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001010000
............CGTCTGGCCGAGAAGGATGAGGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
.......................GAAGGATGAGGAGATTGAGGCCAT.............................................................................................................................................................................................................................................................................................................................................................................................................................2411.001010000
............CGTCTGGCCGAGAAGGATGA............................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001010000
..CGCCGAGCGTCGTCTGGCCGAGAAGG................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001010000
.........................AGGATGAGGAGATTGAGGC................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001010000
.................GGCCGAGAAGGATGAGGAGATTGAG..................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001100000
droBip1
GACGCCGAGCGTCGTCTGGCCGAGAAGGATGAGGAGATTGAGGCCATCCGGTAAGTGTA---------T-----------------------------------------------CCCTAA---T-CCACAATT----TCAA-CCCT-CCTTGGGAAGT----TGCCT------------------------------------------ACGTCTCTGACTTAT------------ACA-----AAC-----------------AAACAATATCAAG-------------------------GCTGCTTT-CCCTGCCAAAGCGGAAGCAACTG-A--AAAAA-----A-------------AGCAAGGTTCTT----CGATTGGGG-ATCGAAT-G----GGAAATCAATCGATAGTGCCT-----CGATCGCT--------------GCCAACAGASizeHit CountTotal NormTotal
No Reads
droKik1
GACGCCGAGCGTCGCCTGGCCGAGAAGGATGAGGAGATCGAGGCTATCCGGTAAGTTAT----------AGGACATAG--------T----------C-TGGGAAACGAAGCATAACTTTTGATAT-CGATAATC----ATAAATCCC--CCTTGGAAGT----AGCCC-------------------------------------------CGCCTCTGGCTCTCAA-------CTGACAGCGACAAC-----------------AGAC-----GAAGGTCGATCGCTG--------GGTT--GTTGTTTC-CTTAGCCAAAGCGGAAGCCCCCCCAAAA--AA-----CC--AAAATA-CAACGCAAGGCCCCG----TCTTTGGGGTACTGAGGGG----GGAAATCAATCGATTGATTCT-----CGATCGATC----TTC---ACTGCCAACA--SizeHit CountTotal NormTotal
No Reads
droFic1
GAGATCGATCGCCGCATCCAGGAGAAGGAGGAGGAGTTCGAGAACACCCG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
GAGATCGATCGCCGCATCCAGGAGAAGGAGGAGGAGTTCGAGAACACCCG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
GATGCCGAGCGTCGTCTGGCCGAGAAGGATGAGGAGATCGAGGCCATCCGGTAAGTAAT----------TGATCAGAT--------A----------T-AGGGTA----------------------------CTTAAGTAAG-CCCC-CCTTGGGAAGT----AGCCCCC---A------------------------------------ACGCCACTGCCTCTCAA-------CTGACAGCGACAAC-----------------AGAC-----GAAGGTCGATCGCTG--------GGTT--GTCGCTTCCCCCTGCCAAAGCGGAAGCCCC---AAAA--AACCAAAAATAAAAACA-CCCCTCAAGGCCCCC----C-------------TAT-G----GGAAATCAATCGATTGATTCG-----CAATCGCTT----TCC---ACTGCCAACA--SizeHit CountTotal NormTotal
No Reads
droBia1
GAGATCGACCGCCGCATCCAGGAGAAGGAGGAGGAGTTCGAGAACACCCG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droTak1
GAGATCGATCGCCGCATCCAGGAGAAGGAGGAGGAGTTCGAGAACACCCG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEug1
GAGATCGACCGCCGCATCCAGGAGAAGGAGGAGGAGTTCGAGAACACCCG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
dm3
GACGCCGAGCGTCGTCTGGCCGAGAAGGATGAGGAGATCGAGGCCATTCGGTAAGTTAC----------TGACCAGGG--------A----------T-TGGTAA----------------------------CTAGAGTTAA-CCCCCTTTTTGGAAGT----AGCCCC-----------------------------------------ACGCCACTGCACCACGA-------GTGACAGCGAGAAC-----------------AGAC-----GAAGG----------------------TTTTCGTTTC-CCCTGCCAAAGCGGAAGTCCC---AAAA--AA-----AA--TAAACA-CCCCTCAAGGCCCC-------------------AAGGG----GGAAATTATTCGATTGATTCG-----CAATCGCTT----TC-GCAATTGCCAACA--SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
..CGCCGAGCGTCGTCTGGCCGAGAA..................................................................................................................................................................................................................................................................................................................................................................................................................................................2413.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..CGCCGAGCGTCGTCTGGCCGAGAAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..CGCCGAGCGTCGTCTGGCC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................GGCCGAGAAGGATGAGGAGATCGA...................................................................................................................................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................GATGAGGAGATCGAGGCCATT............................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................AGAAGGATGAGGAGATCGA...................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................CCGAGAAGGATGAGGAGATCGA...................................................................................................................................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..CGCCGAGCGTCGTCTGGCCGAGAAGGATG.............................................................................................................................................................................................................................................................................................................................................................................................................................................2912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................AGGATGAGGAGATCGAGGCCAT.............................................................................................................................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.ACGCCGAGCGTCGTCTGGCC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...GCCGAGCGTCGTCTGGCCGAGAAGATC..............................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................TGAGGAGATCGAGGCCATTA...........................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........CGTCGTCTGGCCGAGAAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
....................CGAGAAGGATGAGGAGATCGAGG.................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
...........................GATGAGGAGATCGAGGCCATTCGC.........................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..CGCCGAGCGTCGTCTGGCCGAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................GATGAGGAGATCGAGGCCA..............................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................TGGCCGAGAAGGATGAGGAGA.......................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000
.............................TGAGGAGATCGAGGCCATTC...........................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................GAGGAGATCGAGGCCATT............................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
GACGCCGAGCGTCGTCTGGCCGAGAAGGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................TGGCCGAGAAGGATGAGGAGAT......................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000
GACGCCGAGCGTCGTCTGGCCGAGAAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................AGGATGAGGAGATCGAGGCCATTC...........................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000
..CGCCGAGCGTCGTCTGGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..CGCCGAGCGTCGTCTGGCCGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...GCCGAGCGTCGTCTGGCCGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................A-CCCCTCAAGGCCCC-------------------AAG...............................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..CGCCGAGCGTCGTCTGGCCG......................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
..............................................................................................................................................A-CCCCCTTTTTGGAAGT----AGCC....................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000
...............CTGGCCGAGAAGGATGAGGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................AGAAGGATGAGGAGATCGAG..................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..CGCCGAGCGTCGTCTGGCCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................AAGGATGAGGAGATCGAGGCCC..............................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.ACGCCGAGCGTCGTCTGGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............CGTCTGGCCGAGAAGGATGAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................GGCCGAGAAGGATGAGG..........................................................................................................................................................................................................................................................................................................................................................................................................................................1711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............CGTCTGGCCGAGAAGGATGAGGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................AGGATGAGGAGATCGAGG.................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
...........................................................................................................................................................................................................................GCACCACGA-------GTGACAGCGAGAAC-----------------..................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................GGATGAGGAGATCGAGGC................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..CGCCGAGCGTCGTCTGGCCGAGAAGG................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................A-------GTGACAGCGAGAAC-----------------AGG...............................................................................................................................................................................................1820.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000
.......AGCGTCGTCTGGCCGAGAAGATC..............................................................................................................................................................................................................................................................................................................................................................................................................................................2320.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................TTAC----------TGACCAGGG--------A----------T-TCC......................................................................................................................................................................................................................................................................................................................................................................1830.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................AGGCCCC-------------------AAGGG----GGAATA...................................................1830.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................AAGGATGAGGAGATC.....................................................................................................................................................................................................................................................................................................................................................................................................................................1540.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................AGGCCCC-------------------AAGGG----GGAAGGC..................................................19100.1010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
GACGCCGAGCGTCGTCTGGCCGAGAAGGATGAGGAGATCGAGGCCATTCGGTAAGTTAC----------TGACCAGGG--------A----------T-AGGGAA----------------------------CTAGCGTAAG-CCCCTCTTTTTGAAGT----AGCCCC-----------------------------------------ACGCCACTGCCCCACGA-------GTGACAGCGAGAAC-----------------AGAC-----GAAGG----------------------TTGTCGCTTC-CCCTGCCAAAGCGGAAGCCCC---AAAA--AA-----AG--TAAACA-CCCCTCAAGGCCCC-------------------AGGGG----GGAAATTATTCGATTGATTTC-----CAATCGCTT----TC-GCAATTGCCAACA--SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
..CGCCGAGCGTCGTCTGGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................1821.50300300000000000000
.....................................................................................................................................................................................................................................................GAAC-----------------AGAC-----GAAGG----------------------TTGTCGCTT.....................................................................................................................................................2211.00100100000000000000
..CGCCGAGCGTCGTCTGGCCGAGAAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................2520.50100100000000000000
...........................GATGAGGAGATCGAGGCC...............................................................................................................................................................................................................................................................................................................................................................................................................................1820.50101000000000000000
..CGCCGAGCGTCGTCTGGCCGG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2120.50100100000000000000
..CGCCGAGCGTCGTCTGGCC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................1920.50100100000000000000
....CCGAGCGTCGTCTGGCCGAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................2020.50100010000000000000
.................GGCCGAGAAGGATGAGGAGATCGAGGC................................................................................................................................................................................................................................................................................................................................................................................................................................2720.50100000000000001000
.....................GAGAAGGATGAGGAGATCGAGGCC...............................................................................................................................................................................................................................................................................................................................................................................................................................2420.50100100000000000000
...........................................................................................................................................................................................................................................GTGACAGCGAGAAC-----------------AGA...............................................................................................................................................................................................1730.33100000001000000000
droSec2
GACGCCGAGCGTCGTCTGGCCGAGAAGGATGAGGAGATCGAGGCCATTCGGTAAGTTAC----------TGACCAGGA--------A----------T-CGGGAA----------------------------CTAGCGTAAA-CCCCCCTTTTGGAAGT----AGCCCC-----------------------------------------ACGTCACTGCCCCACGA-------GTGACAACGAGAAC-----------------AGAC-----GAAGG----------------------TTGTCGCTTC-CCCTGCCAAAGCGGAAGCCCC---AAAA--AA-----AA--TAAACA-CCCCTCAAGGCCCC-------------------AAGGG----GGAAATTATTCGATTGATTCG-----CAATCGCTT----TC-GCAATTGCCAACA--SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
............CGTCTGGCCGAGAAGGATGAGGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................2312.0020020
..CGCCGAGCGTCGTCTGGCCGAGAAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010010
.................GGCCGAGAAGGATGAGGAGATCGAGGC................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010100
.....................GAGAAGGATGAGGAGATCGAG..................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010010
.............GTCTGGCCGAGAAGGATGA............................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100
droYak3
GATGCCGAGCGTCGTCTGGCCGAGAAGGATGAGGAGATCGAGGCCATTCGGTAAGTCAC----------TGATCGGGG--------A----------T-GGGAAA-------------------------CAACTTGAATTAGATCCCCTTTTTGGAAGT----AGCCCC-----------------------------------------ACGCCACTGCCATGCGA-------GTGACAGCGAGAAC-----------------AGAC-----GAAGG----------------------TTTTCGCTTC-CCCTGCCAAAGCGGAAGTCGC---GAAAAAG----AAAACACAAACA-CCAATCAAGGCCCC-------------------AAGGGGGAGGGTAATTATTCGATTGATTCGCTTTCCAATCGCTT----TCC---ACTGCCAACA--SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.......................GAAGGATGAGGAGATCGAGGCCATT............................................................................................................................................................................................................................................................................................................................................................................................................................25110.0010000000000010
.....................GAGAAGGATGAGGAGATCGAGGCC...............................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000100000
GATGCCGAGCGTCGTCTGGCC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100100000000
...........................GATGAGGAGATCGAGGCCATT............................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000010000
.....................GAGAAGGATGAGGAGATC.....................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100100000000
GATGCCGAGCGTCGTCTGGCCGAGAAGG................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000010000
............CGTCTGGCCGAGAAGGATGA............................................................................................................................................................................................................................................................................................................................................................................................................................................2020.50100000010000
droEre2
GACGCCGAGCGTCGTCTGGCCGAGAAGGATGAGGAAATCGAGGCCATCCGGTAAGCTAC----------TGCTCAGGG--------A----------TCAGGGAA----------------------------CTAGAGTAAG-CCCCCCTTTTGGAAGT----AGCCCC-----------------------------------------ACGCCACTGCCTCGCGA-------GTGACAGCGAGAAC-----------------AGAC-----GAAGG----------------------TTTTCGCTTCCCCTTGCCAAAGCGGAAGCCCC---AAGA--A------AA--TAAACA-CCCCTCAAGGCCCC-------------------AAGGG----GGAAACTATTCGATTGATTCG-----CAATCGCTT----TCC---ACTGCCAACA--SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.................GGCCGAGAAGGATGAGGAAATCGA...................................................................................................................................................................................................................................................................................................................................................................................................................................2412.0020000020
.................GGCCGAGAAGGATGAGGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................1812.0020010100
............CGTCTGGCCGAGAAGGATGAGGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010001000
..................GCCGAGAAGGATGAGGAAATCG....................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000100
.................GGCCGAGAAGGATGAGGAAATC.....................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000010
...................................................................................................................................................................................................................................................................................................................................................GA--A------AA--TAAACA-CCCCTCAAGGCCCC-------------------AAGG..............................................................2911.0011000000
...............CTGGCCGAGAAGGATGAGGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000010
............CGTCTGGCCGAGAAGGATGAGGAA........................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010100000
.........CGTCGTCTGGCCGAGAAGGATGAGG..........................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000100
...........................GATGAGGAAATCGAGGCCA..............................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000100
dp5
GATGCCGAGCGTCGTCTGGCCGAGAAGGATGAGGAGGTTGAGGCTATTCGGTAAGTAAT----------TGTCT---------------------GATCAT---------------CC-------TC---------------GATC---CCCTTGGAAGTGCCCAGCCCCCTGAAATGC-----------------------------GC-ACTCCTCTGTC--------------TGACAGCGACA---GTCGACAACTGTCGATTGAC-----GAAGGTCAATCACTT--------ATTG--GCAGTTTC-CCCTGCCAAAGCGGAAGCCC------------------------ACAGTCCCCCAAGGCCCCCGATACGAGTG----------GGG----GAAAACCAATCGATTGTTTTG-----CAATCGCTG----C----------CAATTGCSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.ATGCCGAGCGTCGTCTGGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
......GAGCGTCGTCTGGCCGAGAAGGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100000000
..TGCCGAGCGTCGTCTGGCC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
....CCGAGCGTCGTCTGGCCGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
.ATGCCGAGCGTCGTCTGGCCGAGAAGG................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000001
..........GTCGTCTGGCCGAGAAGGATGAGGAG........................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010100000000
.ATGCCGAGCGTCGTCTGGCCGAGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010100000000
..........................GGATGAGGAGGTTGAGGCT...............................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
.............................TGAGGAGGTTGAGGCTATTCGC.........................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010001000000
...........................GATGAGGAGGTTGAGGCT...............................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000010000
................................GGAGGTTGAGGCTATTCG..........................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010100000000
...GCCGAGCGTCGTCTGGCCGAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
..................GCCGAGAAGGATGAGGAGGTTGAGGCT...............................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010100000000
droPer2
GATGCCGAGCGTCGTCTGGCCGAGAAGGATGAGGAGGTTGAGGCTATTCGGTAAGTAAT----------TGTCT---------------------GATCAT---------------CC-------TC---------------GATC---CCCTTGGAAGTGCCCAGCCCCCTGAAATGT-----------------------------GC-ACTCCTCTGTC--------------TGACAGCGACA---GTCGACAACTGTCGATTGAC-----GAAGGTCAATCACTT--------ATTG--GCAGTTTC-CCCTGCCAAAGCGGAAGCCC------------------------ACAGTCCCCCAAGGCCCCCGATA-GAGTG----------GGG---GGAAAACCAATCGATTGTTTTG-----CAATCGCTG----C----------CAATTGCSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
GATGCCGAGCGTCGTCTGGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................2016.006600000
.....................GAGAAGGATGAGGAGGTTG....................................................................................................................................................................................................................................................................................................................................................................................................................................1913.003000003
...........................GATGAGGAGGTTGAGGCT...............................................................................................................................................................................................................................................................................................................................................................................................................................1813.003000003
.................GGCCGAGAAGGATGAGGAGGTT.....................................................................................................................................................................................................................................................................................................................................................................................................................................2212.002000002
..TGCCGAGCGTCGTCTGGCCGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.002200000
........................AAGGATGAGGAGGTTGAG..................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000001
..................GCCGAGAAGGATGAGGAGGTT.....................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000001
...GCCGAGCGTCGTCTGGCCGAGAA..................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001010000
...........................GATGAGGAGGTTGAGGCTATT............................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000001
..........................GGATGAGGAGGTTGAGGCTA..............................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000001
.....................GAGAAGGATGAGGAGGTTGAGGCTA..............................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000001
....................CGAGAAGGATGAGGAGGTTGA...................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001010000
.............GTCTGGCCGAGAAGGATGAGGAG........................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000001
.....................GAGAAGGATGAGGAGGTT.....................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000001
.......................GAAGGATGAGGAGGTTGA...................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000001
.....................GAGAAGGATGAGGAGGTTGAG..................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000001
.......................GAAGGATGAGGAGGTTGAGGCTATT............................................................................................................................................................................................................................................................................................................................................................................................................................2511.001010000
..TGCCGAGCGTCGTCTGGCCGG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
.......................GAAGGATGAGGAGGTTGAGG.................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000001
.......................GAAGGATGAGGAGGTTGAG..................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000001
droWil2
GATGCCGAGCGTCGTCTGGCCGAGAAGGATGAGGAAATTGAGGCTATTCGGTAAGTCGG---------T-----------------------------------------------TTTTCC---TT---------------C--T-CTCTCTTGC-ATT----TTCTTC--A-ATCAACGCCAAAACAAACAACGATTGGAAGTGGCCCAAAAAAATTAA----AGGGAAAAAGCAAATAACAACAATAGACGAC--------------------AAGGCCAATCAGTTTAATGTAC----ATATTGTTTC-CTCTGCCAAAGCGGAAGCCCCT-------------------------------------------------------------GAA----CGAAATCAATCGATTGCTTTT--TTGCAATCGATC----TT----------AATTCTSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
GATGCCGAGCGTCGTCTGGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................2013.00330000
GATGCCGAGCGTCGTCTGGCC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.00201100
GATGCCGAGCGTCGTCTGGCCGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00101000
.......................GAAGGATGAGGAAATTGAGGCT...............................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100100
.ATGCCGAGCGTCGTCTGGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00110000
GATGCCGAGCGTCGTCTGG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100010
....................CGAGAAGGATGAGGAAATTGA...................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100001
............CGTCTGGCCGAGAAGGATGAGGAG........................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100100
.....................GAGAAGGATGAGGAAATTGA...................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100100
............CGTCTGGCCGAGAAGGAT..............................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100010
..TGCCGAGCGTCGTCTGGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00101000
.....................GAGAAGGATGAGGAAATTGAGG.................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100010
.................GGCCGAGAAGGATGAGGAAATTGAGG.................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100010
..................GCCGAGAAGGATGAGGAAATTGA...................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100100
........................AAGGATGAGGAAATTGAGGCT...............................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100100
...GCCGAGCGTCGTCTGGCCGAGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100100
....................CGAGAAGGATGAGGAAATTGAGGC................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00101000
...............CTGGCCGAGAAGGATGAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100010
.................GGCCGAGAAGGATGAGGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100010
...........................GATGAGGAAATTGAGGCTATTC...........................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100100
GATGCCGAGCGTCGTCTGGCCGAGAAGGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................2911.00100100
....................CGAGAAGGATGAGGAAATTGAG..................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100100
...........................GATGAGGAAATTGAGGCTATTCGCA........................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100100
droVir3
GATGCCGAGCGTCGTCTGGCCGAGAAGGACGAAGAAATTGAGGCTATTCGGTAAGTGTC----------------------------------------AAGCTA----------------------------CTAAGACCCC-TCCTGCTTGTGGAAGT----TGC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
GATGCCGAGCGTCGTCTGGCCGAGAA..................................................................................................................................................................................................................................................................................................................................................................................................................................................2617.007000400000000000000000000000000000000000000000000000000000000003
GATGCCGAGCGTCGTCTGGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................2013.003000100000000000011000000000000000000000000000000000000000000000
GATGCCGAGCGTCGTCTGGCC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.002000100000000000000010000000000000000000000000000000000000000000
.................GGCCGAGAAGGACGAAGAAATTGAGGC................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000100000000000000000000000000000000000000000000000000000000000
..TGCCGAGCGTCGTCTGGCCGAGAAGGACG.............................................................................................................................................................................................................................................................................................................................................................................................................................................2911.001000100000000000000000000000000000000000000000000000000000000000
.............GTCTGGCCGAGAAGGACGA............................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000010000000000000000000000000000000000000000000000000000
GATGCCGAGCGTCGTCTGGCCGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000100000000000000000000000000000000000000000000000000000000000
............CGTCTGGCCGAGAAGGACGA............................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000001000000000000000000000000000000000
...............CTGGCCGAGAAGGACGAA...........................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000000000000000100000000000000000000000000000000000000000000000
...............................AAGAAATTGAGGCTATTCGCA........................................................................................................................................................................................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
.........CGTCGTCTGGCCGAGAAGGACGAAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000000000000000100000000000000000000000000000000000000000000000
...GCCGAGCGTCGTCTGGCCGAGAAGGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000100000000000000000000000000000000000000000000000000000000000
..............................GAAGAAATTGAGGCTATTCGCA........................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000100000000000000000000000000000000000000000000000
...............CTGGCCGAGAAGGACGAAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000000010000000000000000000000000000000000000000000
.ATGCCGAGCGTCGTCTGGCCGAGAA..................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000000000000000000100000000000000000000000000000000000000000000
GATGCCGAGCGTCGTCTGGCCGAGAAGGACGAA...........................................................................................................................................................................................................................................................................................................................................................................................................................................3311.001000000000000000000000000000000000000000000000000000000000010000
.........CGTCGTCTGGCCGAGAAGGACGAAGAA........................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001001000000000000000000000000000000000000000000000000000000000000
droMoj3
GACGCCGAGCGTCGTCTGTCCGAGAAGGATGAGGAGATTGAGGCTATTCGGTAAGTGTG---------CTAACCACCTATACATTCAATGGGTTCGATCGT---------------C--------TC---------------G--CCC-CCTGGGGAAGT----TGCCTC--T-GTGAA-----------------------------CG-ACGCCGCTGGCAC---------------------------------------------------AAACC----------------------TTGCGGCTAG-CTCTGCCAAAACGGAAGTGATT--------------------------CGATTCAATGCAGTC------------------AA--T----GCAAGTCAATCGATTGATTTG-----CAATCGTCGGCTAGCC---GTTGCCAA----SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.................GTCCGAGAAGGATGAGGAGATTG....................................................................................................................................................................................................................................................................................................................................................................................................................................2312.002000002
...........................GATGAGGAGATTGAGGCTATTCGCA........................................................................................................................................................................................................................................................................................................................................................................................................................2512.002100001
..........GTCGTCTGTCCGAGAAGGATGAGGAGA.......................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000001
.............GTCTGTCCGAGAAGGATGAGGAGATTG....................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001100000
............CGTCTGTCCGAGAAGGATG.............................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
......................AGAAGGATGAGGAGATTGAGGCTA..............................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000001
............................ATGAGGAGATTGAGGCTATTCGCA........................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000001
...............CTGTCCGAGAAGGATGAGGAG........................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000001
..CGCCGAGCGTCGTCTGTC........................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000010
.................GTCCGAGAAGGATGAGGAGATTGAGG.................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000001
...............CTGTCCGAGAAGGATGAGGAGATTG....................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000001
....................CGAGAAGGATGAGGAGATTGAGG.................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000001
...........................GATGAGGAGATTGAGGCT...............................................................................................................................................................................................................................................................................................................................................................................................................................1811.001100000
.................GTCCGAGAAGGATGAGGAGATTGAGGC................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000001
.....................GAGAAGGATGAGGAGATTGAGGC................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000001
.................GTCCGAGAAGGATGAGGAG........................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
droGri2
GACGCCGAGCGTCGTCTGGCCGAGAAGGATGAGGAAATTGAGGCTATTCGGTAAGTGAATTGACACAA--AGACACACACACAGACA----------C-AGAGT---------------TTC---CT---------------G--T-CTCCCTTGGAAGT----TGCCTC--TAGTTGT-----------------------------CG-ACGCCTCTGGCA--------------GA---------------------------------------CC----------------------TTGTGTCTTG-CGCTGCCAAATCGGAAGCATT---------------------------------------------------CGGG---CCAATGC----GAAAGTCAATCGATTGATTTG-----CAATCGTCG-CTGGCTGCAATTGCCAA----SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/18/2015 at 04:41 AM