ID:

dan_2462

 Coordinate:

scaffold_13337:6711271-6711473 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-6.3 -6.2 -5.8 -5.5

Flybase annnotation

exon [dana_GLEANR_10030:3]; exon [dana_GLEANR_10030:2]; CDS [Dana\GF10074-cds]; CDS [Dana\GF10074-cds]; intron [Dana\GF10074-in]

No Repeatable elements found

Sense Strand Reads

##################################################-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
ATGTGGCCGAGCGGGTGGTGCGCGTTGATAAGCCCGTTTCCACTCACAAAGTGGGACGGGACTGATATCTAATCTCTCCCATCTAGTTGTAGCCGACATTTCCATTGCCTCAGCCCTATTATAAATAATAGTACCTTAAACTTAAAAATAAACTAGAAAAAAATTTAAAAAGATTCTTTTTGGCAGGGGGTTATGAAATTTCATAATGGCAGGGGCTTGTCTACTTTTTAGTAGACTCTTCTATTTTATACAGTCGTCTATACATTTTAATAAAATCGGATCGGTTCGGAAAACTTGCCAGAG
********************************************************************.................(((..((.......................(((((......)))))...))..)))****************************************************************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M044
female body
 M058
embryo
 V106
head
 V105
male body		 V055
head
 V039
embryo
..GTGGCCGAGCGGGTGGTGCGC........................................................................................................................................................................................................................................................................................ 21 0 1 20.00 20 5 2 6 7 0 0
....GGCCGAGCGGGTGGTGCGC........................................................................................................................................................................................................................................................................................ 19 0 1 4.00 4 2 0 2 0 0 0
....................................................................CTAATCTCTCCCATCTAGTTGTAGC.................................................................................................................................................................................................................. 25 0 1 3.00 3 2 1 0 0 0 0
..................................................................ATCTAATCTCTCCCATCTAGTTGTAGC.................................................................................................................................................................................................................. 27 0 1 2.00 2 2 0 0 0 0 0
..GTGGCCGAGCGGGTGGTGC.......................................................................................................................................................................................................................................................................................... 19 0 1 2.00 2 2 0 0 0 0 0
............................TAAGCCCGTTTCCACTCACA............................................................................................................................................................................................................................................................... 20 0 1 2.00 2 0 0 2 0 0 0
..GTGGCCGAGCGGGTGGTGCGCGTTG.................................................................................................................................................................................................................................................................................... 25 0 1 2.00 2 1 0 1 0 0 0
..GTGTCCGAGCGGGTGGTGCGC........................................................................................................................................................................................................................................................................................ 21 1 1 2.00 2 0 1 1 0 0 0
.....GCCGAGCGGGTGGTGCGCGT...................................................................................................................................................................................................................................................................................... 20 0 1 2.00 2 1 0 0 1 0 0
........................TTGATAAGCCCGTTTCCACTCACAAA............................................................................................................................................................................................................................................................. 26 0 1 1.00 1 0 0 1 0 0 0
....................................................................CTAATCTCTCCCATCTAGTTGTAGCCGAC.............................................................................................................................................................................................................. 29 0 1 1.00 1 0 1 0 0 0 0
............................................CACAAAGTGGGACGGGACTGATAT........................................................................................................................................................................................................................................... 24 0 1 1.00 1 1 0 0 0 0 0
..GTGGCCGAGCGGGTGGTGCGCGT...................................................................................................................................................................................................................................................................................... 23 0 1 1.00 1 0 0 0 1 0 0
..........................................................................................................................AAATAATAGTACCTTAAAC.................................................................................................................................................................. 19 0 1 1.00 1 0 1 0 0 0 0
................................................................................ATCTAGTTGTAGCCGACATTTCCATT..................................................................................................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0
....................................................................CTAATCTCTCCCATCTAGTTGTA.................................................................................................................................................................................................................... 23 0 1 1.00 1 1 0 0 0 0 0
...................GCGCGTTGATAAGCCCGTTTCCA..................................................................................................................................................................................................................................................................... 23 0 1 1.00 1 1 0 0 0 0 0
..........................................CTCACAAAGTGGGACGGGACC................................................................................................................................................................................................................................................ 21 1 1 1.00 1 0 1 0 0 0 0
................................................................ATATCTAATCTCTCCCATCTAGTT....................................................................................................................................................................................................................... 24 0 1 1.00 1 1 0 0 0 0 0
.........................................................................CTCTCCCATCTAGTTGTAGCCGA............................................................................................................................................................................................................... 23 0 1 1.00 1 0 1 0 0 0 0
....................................................................CTAATCTCTCCCATCTAGTT....................................................................................................................................................................................................................... 20 0 1 1.00 1 0 0 0 1 0 0
..................................................GTGGGACGGGACTGATAT........................................................................................................................................................................................................................................... 18 0 1 1.00 1 1 0 0 0 0 0
.................................................................................................ATTTCCATTGCCTCAGCCTC.......................................................................................................................................................................................... 20 2 1 1.00 1 0 1 0 0 0 0
....................................................................CTAATCTCTCCCATCTAGTTGTAACC................................................................................................................................................................................................................. 26 1 1 1.00 1 0 0 0 1 0 0
.....................GCGTTGATAAGCCCGTTTCCACTG.................................................................................................................................................................................................................................................................. 24 1 1 1.00 1 1 0 0 0 0 0
............................................CACAAAGTGGGACGGGACT................................................................................................................................................................................................................................................ 19 0 1 1.00 1 0 1 0 0 0 0
...TGGCCGAGCGGGTGGTGCGC........................................................................................................................................................................................................................................................................................ 20 0 1 1.00 1 0 0 1 0 0 0
....GGCCGAGCGGGTGGTGCGCGTTG.................................................................................................................................................................................................................................................................................... 23 0 1 1.00 1 0 0 0 1 0 0
..............................................CAAAGTGGGACGGGACTG............................................................................................................................................................................................................................................... 18 0 1 1.00 1 0 0 0 1 0 0
.........................TGATAAGCCCGTTTCCACT................................................................................................................................................................................................................................................................... 19 0 1 1.00 1 0 0 0 0 1 0
.................................................................TATCTAATCTCTCCCATCTAGTTGT..................................................................................................................................................................................................................... 25 0 1 1.00 1 0 1 0 0 0 0
........................................................................TCTCTCCCATCTAGTTGTAGCCGAC.............................................................................................................................................................................................................. 25 0 1 1.00 1 0 1 0 0 0 0
.....GCCGAGCGGGTAGTGCGC........................................................................................................................................................................................................................................................................................ 18 1 1 1.00 1 0 0 0 1 0 0
..GTGGCCGATCGTGTGGTGCGC........................................................................................................................................................................................................................................................................................ 21 2 1 1.00 1 0 0 1 0 0 0
....................................................................CTAATCTCTCCCATCTAGTTGTAGCC................................................................................................................................................................................................................. 26 0 1 1.00 1 0 1 0 0 0 0
....GGCCGAGCGGGTGGTGCGCGTT..................................................................................................................................................................................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0 0
.........................................................................CTCTCCCATCTAGTTGTAGCC................................................................................................................................................................................................................. 21 0 1 1.00 1 0 1 0 0 0 0
..........................................................GGACTGATATCTAATCTCT.................................................................................................................................................................................................................................. 19 0 1 1.00 1 1 0 0 0 0 0
..........................................CTCACAAAGTGGGACGGGACT................................................................................................................................................................................................................................................ 21 0 1 1.00 1 0 1 0 0 0 0
..............................AGCCCGCTTCCACTCGCAAAG............................................................................................................................................................................................................................................................ 21 2 1 1.00 1 0 0 0 0 0 1
..GTGTCCGATCGGGTGGTGCGC........................................................................................................................................................................................................................................................................................ 21 2 1 1.00 1 0 0 1 0 0 0
................................................................................................CATTTCCATTGCCTCAGCCCT.......................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0
.....GCCGAGCGGGTGGTGCGC........................................................................................................................................................................................................................................................................................ 18 0 1 1.00 1 1 0 0 0 0 0
.................................................................................................ATTTCCATTGCCTCAGCCCT.......................................................................................................................................................................................... 20 0 1 1.00 1 0 1 0 0 0 0
.....GCCGAGCGGGTGGTGCGCG....................................................................................................................................................................................................................................................................................... 19 0 1 1.00 1 1 0 0 0 0 0
..GTCGCCGAGCGGGTGGTGAGGGT...................................................................................................................................................................................................................................................................................... 23 3 1 1.00 1 0 1 0 0 0 0
...........................................TCACAAAGTGGGACGGGACTGATAT........................................................................................................................................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0 0
..GTGGCCGAGCGGGTCGTGCGC........................................................................................................................................................................................................................................................................................ 21 1 1 1.00 1 0 0 1 0 0 0
.............................................................................................CGACATTTCCATTGCCTCAGCCC........................................................................................................................................................................................... 23 0 1 1.00 1 0 1 0 0 0 0
...........................................................GACTGATATCTAATCTCTCCCATCTAGT........................................................................................................................................................................................................................ 28 0 1 1.00 1 0 1 0 0 0 0
....GGCCGAGCGGGTGGTGCG......................................................................................................................................................................................................................................................................................... 18 0 1 1.00 1 1 0 0 0 0 0
........................................CACTCACAAAGTGGGACGGGA.................................................................................................................................................................................................................................................. 21 0 1 1.00 1 0 0 0 1 0 0
..........................................CTCACAAAGTGGGACGGGACTGA.............................................................................................................................................................................................................................................. 23 0 1 1.00 1 1 0 0 0 0 0
....GGCCGAGCGGGAGGTGCGC........................................................................................................................................................................................................................................................................................ 19 1 2 0.50 1 0 0 0 1 0 0
..........................................................................................................................................................................................................................................................................TTAATAGAACCGGATCGG................... 18 2 4 0.25 1 0 0 0 0 1 0
....GGCTGACCGGGTGATGCGCG....................................................................................................................................................................................................................................................................................... 20 3 6 0.17 1 0 0 0 1 0 0
...................................................................................................................................................................................TGGGCGTGGGGTTATGAAAT........................................................................................................ 20 3 10 0.10 1 0 0 0 0 1 0
......................................................GACGGGACTGACATCTG........................................................................................................................................................................................................................................ 17 2 19 0.05 1 0 0 0 0 1 0

Anti-sense strand reads

TACACCGGCTCGCCCACCACGCGCAACTATTCGGGCAAAGGTGAGTGTTTCACCCTGCCCTGACTATAGATTAGAGAGGGTAGATCAACATCGGCTGTAAAGGTAACGGAGTCGGGATAATATTTATTATCATGGAATTTGAATTTTTATTTGATCTTTTTTTAAATTTTTCTAAGAAAAACCGTCCCCCAATACTTTAAAGTATTACCGTCCCCGAACAGATGAAAAATCATCTGAGAAGATAAAATATGTCAGCAGATATGTAAAATTATTTTAGCCTAGCCAAGCCTTTTGAACGGTCTC
******************************************************************************************************************************************************************.................(((..((.......................(((((......)))))...))..)))******************************************************************** 		Read size # Mismatch Hit Count Total Norm Total V055
head
 M058
embryo
 M044
female body
 V039
embryo
..............................TCGGGCAAAGGTGGGTGT............................................................................................................................................................................................................................................................... 18 1 1 1.00 1 1 0 0 0
.............................TTCGGGCAGAGGTGAATGTAT............................................................................................................................................................................................................................................................. 21 3 2 0.50 1 1 0 0 0
..CACCGGCTCGCTCATCACG.......................................................................................................................................................................................................................................................................................... 19 2 2 0.50 1 1 0 0 0
............................................................................................................................................................................................CCAATACTTTATAGTATAA................................................................................................ 19 2 4 0.25 1 0 1 0 0
...............................................................................................................................................................................................................CAGGCCCCAAACAGATGAAA............................................................................ 20 3 4 0.25 1 0 1 0 0
..............................................................................................CTGTAAGGGTAAGGGAGT............................................................................................................................................................................................... 18 2 6 0.17 1 1 0 0 0
.......................CAACTTCTGGGGCAAAGGTG.................................................................................................................................................................................................................................................................... 20 3 7 0.14 1 1 0 0 0
.............................................TGTTTCACCCTGCCTTAACC.............................................................................................................................................................................................................................................. 20 3 9 0.11 1 1 0 0 0
.........TCGCCCACCACGCGAACCTC.................................................................................................................................................................................................................................................................................. 20 3 11 0.09 1 0 0 1 0
.....................AGCCACTATTCGGGCGAAG....................................................................................................................................................................................................................................................................... 19 3 14 0.07 1 0 0 0 1
..........CGCCCACCACGCGAACCTC.................................................................................................................................................................................................................................................................................. 19 3 20 0.05 1 0 0 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droAna3 scaffold_13337:6711221-6711523 + dan_2462 ATGTGGCCGAGCGGGTGGTGCGCGTTGATAAGCCCGTTTCCACTCACAAAGTGGGACGGGACTGATATCTAATCTCTCC-------------------CATCTAGTTGTAGCCGACATTTCCATTGCC-----------TCAG---------CCCTATTATAAATAAT--AGTACCTTAA------ACTTAAAAATAAACTAGAAAAAAA--------TTTAAAAAGAT-TCTTTTT--GGCAGGGG-GTTATG----------------------------------------------------AAATTTCATA----AT-GGCAGGGGCTTGTCTACTTTTTAGTAGACTCTTCTATTTTATACA----------------------GTCGTCTATACATTTTAATAAAATCGGATCGGTTCGGAAAAC--TTGCCAGAG
droBip1 scf7180000396709:442440-442742 + ATGTGGCCGAGCGGGTGGTGCGCGTAGATAAGCCCGTTTCCACTCACAAGGTGGGTCGGGACTGAGATCTTATCTCACC-------------------CATCTAGTTGTAGCCGACATTTCCATTGCC-----------TCAG---------CCCTATTATAAATAAT--AATACATAAA-------CTTAAAAATAAACTAGTAAAAA---------CTAAAACAATATC-TTTTT-TGGTTGGGGGATTATG----------------------------------------------------AAATTTTATA----AT-GTCAGGGACTTGTATACTTTTTAGTAGACTCTTCTGCTTTAGTCA----------------------GTTGGCTTTACATCTTAATAAAATCGGATCGATTAGGAAAAC--CTGCCAGAG
droKik1 scf7180000302329:369256-369622 + ATGTGGCCGAGCGGGTGGTGCGTGTGGACAAGCCCGTGGCCACGCACAAGGTGGGCCGTGACT-AGATCTTATCTCCGC--------ATCCCCATTCGTATC-----------TAGTTTTCCATTGTC-----------TTAA--------C-C-CCCCGTAAATAAT--AGTGAATAATAATAAAAATAAA-----AACTAA-AAATAATCCAAAAACCTCAAAATTC---TATAT-CAGTTGGGG-AGGACGCCCTGTATATGACCGCAGCCCTATCACCCGTCACCCGGAATGACGGCCACTCAAATTGTTCAAATTCTGGCCAGGCGATGGTCTGCTGGTCAGTCGCAACTGTGCCTCCAGCTAGGCAAGTCCCTGAGTCCATATCGTGGCATTTGCAG----------------------AGATAACATGAGTCGGAG
droFic1 scf7180000454113:881405-881594 + ATGTGGCCGAGCGGGTGGTGCGGGTGGACAAGCCCGTTTCCACCCACAAGGTGGGTCGGGACT-AGATCTTATCACCCGCATCTGC----------CGTATCTAGTTGTAGCCGACTTTTCCATTGCC-----------CAAAG-------C-C-CCCCATAAATAAT--TTTAAATAAA------AC-CTAGAGTAAACTCGAAAA-----------CATAAGTAGTT---TATTTTGGGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AG
droEle1 scf7180000491249:4436835-4437014 + ATGTGGCCGAGCGGGTGGTGCGGGTGGACAAGCCCGAGGCCACTCACAAGGTCGGACGAGACT-AGATCTTATCACCCC------------------ATATCTATTT------------------GCC-----------CCGAC-------ACC--CCCATAAATAATATAGTAAATAAAAATAAAACTAAAAAGTAAACGAGAAAA-----------CAAAAGTGCTA---TTTTTTGGT-------GTTAT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAGAT
droRho1 scf7180000769153:18-24 + GCCAGAG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droBia1 scf7180000300910:1302660-1302817 - ATGTGGCCGAGAGGGTGGTCAGGGTGGACAAGCCGGTGGCCACGCACAAGGTGGGACGGGACT-AGATCTTATCTCCCG-------------------TATCTAGTTGTAGACGACTTTTCCATTGCC-----------CGAACCC---AAG---CCCCGTAAATCAT--AGTAAATAAA-------C-A-AACATAAGCTCGAAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droTak1 scf7180000414671:150153-150326 - ATGTGGCCGAGAGGGTAGTTCGAGTGGACAAACCAGTGGCCACTCACAAGGTGGGACGGGATT-AGATCTTATCTTCTA------T----------AGTATCTAGTTGTAGACGACTTTTCCATTGCCTTTCCGAAACCCACA--------GCC--CTCATAAATAAT--AGTAAATAAA-------C-AAAACATTAACTCAAAAA-----------TAAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droEug1 scf7180000409007:26712-26869 - ATGTGGCCGAGCGGGTGGTGAGGGTTGACAAGCCCGTGTCCACTCACAAGGTGGGACGAGACT-AGATCTTATCTCATC-------------------CATCTAATTCTAGCCGACTTTTCTATTGCC-----------CTAA---------CC--CCCATAAATAAT--AGTAAATAAA-------C-GTAACATAAACTCGAAAA-----------CAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
dm3 chr3L:1203296-1203467 - ACGTAGCCGAACGGGTGGTGCGGGTGGATAAGCCCGTGGCCACTCACAAAGTGGGACGCGACT-AGATCTTATCTGCCG-------------------TATCTAGTTGTAGCCGACTTTTCCATTGCC-----------CCAA--------C-C-CCCAATAAATAAT--AGTAAATAAA-------C-AAAACATAAGCTCGAAAA-----------CAGAAACAGTC---TTTTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droSim2 3l:1133969-1134139 - ACGTGGCCGAGCGGGTGGTGCGGGTGGACAAGCCCGTATCCACTCACAAGGTGGGACGCGACT-AGATCTTATCTGCCG-------------------TATCTAGTTGTAGCCGACTTTTCCATTGCC-----------CTAA---------CC--CCAATAAATAAT--AGTAAATAAA-------C-AAAACATAAGCTCGAAAA-----------CAGAAACAGTC---TTTTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droSec2 scaffold_2:1196024-1196195 - ACGTGGCCGAGCGGGTGGTGCGGGTGGACAAGCCCGTGGCCACTCACAAGGTGGGACGCGACT-AGATCTTATCTGCCG-------------------TATCTAGTTGTAGCCGACTTTTCCATTGCC-----------CTAA--------C-C-CCCAATAAATAAT--AGTAAATAAA-------C-AAAACATAAGCTCGAAAA-----------CAGAAACGGTC---TTTTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droYak3 3L:1168129-1168307 - ACGTGGCCGAGCGGGTGGTGCGGGTGGACAAGCCCGTGGCCACTCACAAGGTGGGACGCGACT-AGGTCTTATCTCCCG-------------------TATCTAGTTGTAGCCGACTTTTCCATTGCC-----------CTGACCATTTA-C-C-CCCAATAAATAAT--AGTAAATAAA-------C-AAAACATAAGCTCGAAAA-----------CAGAAACAGTC---TTTTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droEre2 scaffold_4784:1195403-1195555 - ACGTGGCCGAGCGGGTGGTGCGCGTGGACAAGCCCGTTTCCACCCACAAGGTGGGACGCGACT-AGATCTTATCTGCCG--------------------------------------TGTCCGTGGCC-----------CCAA--------C-C-CCCCATAAATAAT--AGTAAACAAA-------C-AAAACATAAGCTCGAACA-----------CTGAAATAGTC---TTTTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
dp5 XR_group8:925277-925410 + ATGTCGCCGAGCGGGTGGTGAGGGTGGACAAGCCCCTGTCCACCCACAAAGTGGGAAGAGATT-AGATATAATCTGATCTTCCCGCTA----------TCTATATAAATATCCGACTTTTCCATTGCC-----------TAA---------TCC--GTCATAAATAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droPer2 scaffold_32:553139-553272 - ATGTCGCCGAGCGGGTGGTGAGGGTGGACAAGCCCCTGTCCACCCACAAAGTGGGAAGAGATT-AGATATAATCTGATCTTCTCGCTA----------TCTATATAAATATCCGACTTTTCCATTGCC-----------TAA---------TCC--GTCATAAATAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droWil2 scf2_1100000004540:2374568-2374642 - ATGTGGCCGAACGGGTTGTGCGTGTGGACAAGCCTGTGGCCACACATAAAGTGGGTAGAGATT-AGAACATATAAT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droVir3 scaffold_13049:2693361-2693423 + ATGTGGCCGAGCGCGTGGTCCGTGTGGACAAGCCCCTAGCCACGCACAAGGTGGGCAGGGATT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droMoj3 scaffold_6654:1194545-1194607 - ACGTAGCGGAGCGGGTGGTGCGCGTCGACAAACCCCTGGCCACCCACAAAGTGGGCAGGGACT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droGri2 scaffold_15110:3685305-3685382 + ATGTGGCTGAGCGTGTGGTTCGCGTTGATCCCCCCGCCGACACCCACAAAGTGGGCAGGGACT-GAATCGCCTTTCTCC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droAna3
ATGTGGCCGAGCGGGTGGTGCGCGTTGATAAGCCCGTTTCCACTCACAAAGTGGGACGGGACTGATATCTAATCTCTCC-------------------CATCTAGTTGTAGCCGACATTTCCATTGCC-----------TCAG---------CCCTATTATAAATAAT--AGTACCTTAA------ACTTAAAAATAAACTAGAAAAAAA--------TTTAAAAAGAT-TCTTTTT--GGCAGGGG-GTTATG----------------------------------------------------AAATTTCATA----AT-GGCAGGGGCTTGTCTACTTTTTAGTAGACTCTTCTATTTTATACA----------------------GTCGTCTATACATTTTAATAAAATCGGATCGGTTCGGAAAAC--TTGCCAGAGSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
..GTGGCCGAGCGGGTGGTGCGC....................................................................................................................................................................................................................................................................................................................................................................................................................................21120.0020520076
....GGCCGAGCGGGTGGTGCGC....................................................................................................................................................................................................................................................................................................................................................................................................................................1914.004200002
....................................................................CTAATCTCTCC-------------------CATCTAGTTGTAGC...........................................................................................................................................................................................................................................................................................................................................2513.003210000
..................................................................ATCTAATCTCTCC-------------------CATCTAGTTGTAGC...........................................................................................................................................................................................................................................................................................................................................2712.002200000
..GTGGCCGAGCGGGTGGTGC......................................................................................................................................................................................................................................................................................................................................................................................................................................1912.002200000
............................TAAGCCCGTTTCCACTCACA...........................................................................................................................................................................................................................................................................................................................................................................................................2012.002000002
..GTGGCCGAGCGGGTGGTGCGCGTTG................................................................................................................................................................................................................................................................................................................................................................................................................................2512.002100001
.....GCCGAGCGGGTGGTGCGCGT..................................................................................................................................................................................................................................................................................................................................................................................................................................2012.002100010
........................TTGATAAGCCCGTTTCCACTCACAAA.........................................................................................................................................................................................................................................................................................................................................................................................................2611.001000001
....................................................................CTAATCTCTCC-------------------CATCTAGTTGTAGCCGAC.......................................................................................................................................................................................................................................................................................................................................2911.001010000
............................................CACAAAGTGGGACGGGACTGATAT.......................................................................................................................................................................................................................................................................................................................................................................................2411.001100000
..GTGGCCGAGCGGGTGGTGCGCGT..................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000010
.................................................................................................................................................................AAATAAT--AGTACCTTAA------AC...............................................................................................................................................................................................................................................................1911.001010000
...................................................................................................ATCTAGTTGTAGCCGACATTTCCATT..............................................................................................................................................................................................................................................................................................................................2611.001100000
....................................................................CTAATCTCTCC-------------------CATCTAGTTGTA.............................................................................................................................................................................................................................................................................................................................................2311.001100000
...................GCGCGTTGATAAGCCCGTTTCCA.................................................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
..........................................CTCACAAAGTGGGACGGGACC............................................................................................................................................................................................................................................................................................................................................................................................2111.001010000
................................................................ATATCTAATCTCTCC-------------------CATCTAGTT................................................................................................................................................................................................................................................................................................................................................2411.001100000
.........................................................................CTCTCC-------------------CATCTAGTTGTAGCCGA........................................................................................................................................................................................................................................................................................................................................2311.001010000
....................................................................CTAATCTCTCC-------------------CATCTAGTT................................................................................................................................................................................................................................................................................................................................................2011.001000010
..................................................GTGGGACGGGACTGATAT.......................................................................................................................................................................................................................................................................................................................................................................................1811.001100000
....................................................................................................................ATTTCCATTGCC-----------TCAG---------CCTC...............................................................................................................................................................................................................................................................................................2011.001010000
.....................GCGTTGATAAGCCCGTTTCCACTG..............................................................................................................................................................................................................................................................................................................................................................................................................2411.001100000
............................................CACAAAGTGGGACGGGACT............................................................................................................................................................................................................................................................................................................................................................................................1911.001010000
...TGGCCGAGCGGGTGGTGCGC....................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000001
....GGCCGAGCGGGTGGTGCGCGTTG................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000010
..............................................CAAAGTGGGACGGGACTG...........................................................................................................................................................................................................................................................................................................................................................................................1811.001000010
.........................TGATAAGCCCGTTTCCACT...............................................................................................................................................................................................................................................................................................................................................................................................................1911.001000100
.................................................................TATCTAATCTCTCC-------------------CATCTAGTTGT..............................................................................................................................................................................................................................................................................................................................................2511.001010000
........................................................................TCTCTCC-------------------CATCTAGTTGTAGCCGAC.......................................................................................................................................................................................................................................................................................................................................2511.001010000
....................................................................CTAATCTCTCC-------------------CATCTAGTTGTAGCC..........................................................................................................................................................................................................................................................................................................................................2611.001010000
....GGCCGAGCGGGTGGTGCGCGTT.................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
.........................................................................CTCTCC-------------------CATCTAGTTGTAGCC..........................................................................................................................................................................................................................................................................................................................................2111.001010000
..........................................................GGACTGATATCTAATCTCT..............................................................................................................................................................................................................................................................................................................................................................................1911.001100000
..........................................CTCACAAAGTGGGACGGGACT............................................................................................................................................................................................................................................................................................................................................................................................2111.001010000
...................................................................................................................CATTTCCATTGCC-----------TCAG---------CCCT...............................................................................................................................................................................................................................................................................................2111.001100000
.....GCCGAGCGGGTGGTGCGC....................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001100000
....................................................................................................................ATTTCCATTGCC-----------TCAG---------CCCT...............................................................................................................................................................................................................................................................................................2011.001010000
.....GCCGAGCGGGTGGTGCGCG...................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
...........................................TCACAAAGTGGGACGGGACTGATAT.......................................................................................................................................................................................................................................................................................................................................................................................2511.001100000
................................................................................................................CGACATTTCCATTGCC-----------TCAG---------CCC................................................................................................................................................................................................................................................................................................2311.001010000
...........................................................GACTGATATCTAATCTCTCC-------------------CATCTAGT.................................................................................................................................................................................................................................................................................................................................................2811.001010000
....GGCCGAGCGGGTGGTGCG.....................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001100000
........................................CACTCACAAAGTGGGACGGGA..............................................................................................................................................................................................................................................................................................................................................................................................2111.001000010
..........................................CTCACAAAGTGGGACGGGACTGA..........................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
droBip1
ATGTGGCCGAGCGGGTGGTGCGCGTAGATAAGCCCGTTTCCACTCACAAGGTGGGTCGGGACTGAGATCTTATCTCACC-------------------CATCTAGTTGTAGCCGACATTTCCATTGCC-----------TCAG---------CCCTATTATAAATAAT--AATACATAAA-------CTTAAAAATAAACTAGTAAAAA---------CTAAAACAATATC-TTTTT-TGGTTGGGGGATTATG----------------------------------------------------AAATTTTATA----AT-GTCAGGGACTTGTATACTTTTTAGTAGACTCTTCTGCTTTAGTCA----------------------GTTGGCTTTACATCTTAATAAAATCGGATCGATTAGGAAAAC--CTGCCAGAGSizeHit CountTotal NormTotal
No Reads
droKik1
ATGTGGCCGAGCGGGTGGTGCGTGTGGACAAGCCCGTGGCCACGCACAAGGTGGGCCGTGACT-AGATCTTATCTCCGC--------ATCCCCATTCGTATC-----------TAGTTTTCCATTGTC-----------TTAA--------C-C-CCCCGTAAATAAT--AGTGAATAATAATAAAAATAAA-----AACTAA-AAATAATCCAAAAACCTCAAAATTC---TATAT-CAGTTGGGG-AGGACGCCCTGTATATGACCGCAGCCCTATCACCCGTCACCCGGAATGACGGCCACTCAAATTGTTCAAATTCTGGCCAGGCGATGGTCTGCTGGTCAGTCGCAACTGTGCCTCCAGCTAGGCAAGTCCCTGAGTCCATATCGTGGCATTTGCAG----------------------AGATAACATGAGTCGGAGSizeHit CountTotal NormTotal
No Reads
droFic1
ATGTGGCCGAGCGGGTGGTGCGGGTGGACAAGCCCGTTTCCACCCACAAGGTGGGTCGGGACT-AGATCTTATCACCCGCATCTGC----------CGTATCTAGTTGTAGCCGACTTTTCCATTGCC-----------CAAAG-------C-C-CCCCATAAATAAT--TTTAAATAAA------AC-CTAGAGTAAACTCGAAAA-----------CATAAGTAGTT---TATTTTGGGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGSizeHit CountTotal NormTotal
No Reads
droEle1
ATGTGGCCGAGCGGGTGGTGCGGGTGGACAAGCCCGAGGCCACTCACAAGGTCGGACGAGACT-AGATCTTATCACCCC------------------ATATCTATTT------------------GCC-----------CCGAC-------ACC--CCCATAAATAATATAGTAAATAAAAATAAAACTAAAAAGTAAACGAGAAAA-----------CAAAAGTGCTA---TTTTTTGGT-------GTTAT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAGATSizeHit CountTotal NormTotal
No Reads
droRho1
GCCAGAG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droBia1
ATGTGGCCGAGAGGGTGGTCAGGGTGGACAAGCCGGTGGCCACGCACAAGGTGGGACGGGACT-AGATCTTATCTCCCG-------------------TATCTAGTTGTAGACGACTTTTCCATTGCC-----------CGAACCC---AAG---CCCCGTAAATCAT--AGTAAATAAA-------C-A-AACATAAGCTCGAAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droTak1
ATGTGGCCGAGAGGGTAGTTCGAGTGGACAAACCAGTGGCCACTCACAAGGTGGGACGGGATT-AGATCTTATCTTCTA------T----------AGTATCTAGTTGTAGACGACTTTTCCATTGCCTTTCCGAAACCCACA--------GCC--CTCATAAATAAT--AGTAAATAAA-------C-AAAACATTAACTCAAAAA-----------TAAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEug1
ATGTGGCCGAGCGGGTGGTGAGGGTTGACAAGCCCGTGTCCACTCACAAGGTGGGACGAGACT-AGATCTTATCTCATC-------------------CATCTAATTCTAGCCGACTTTTCTATTGCC-----------CTAA---------CC--CCCATAAATAAT--AGTAAATAAA-------C-GTAACATAAACTCGAAAA-----------CAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
dm3
ACGTAGCCGAACGGGTGGTGCGGGTGGATAAGCCCGTGGCCACTCACAAAGTGGGACGCGACT-AGATCTTATCTGCCG-------------------TATCTAGTTGTAGCCGACTTTTCCATTGCC-----------CCAA--------C-C-CCCAATAAATAAT--AGTAAATAAA-------C-AAAACATAAGCTCGAAAA-----------CAGAAACAGTC---TTTTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.............................................................................................................................................................................AAATAAA-------C-AAAACATAAGCTCGA...............................................................................................................................................................................................................................................2313.0030000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................GTGGATAAGCCCGTGGCC..................................................................................................................................................................................................................................................................................................................................................................................................................1813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
.................................................................GATCTTATCTGCCG-------------------TATCTA...................................................................................................................................................................................................................................................................................................................................................2013.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................CT-AGATCTTATCTGCCG-------------------TATCTAGT.................................................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................AAAGTGGGACGCGACT-AGATCTT....................................................................................................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....GCCGAACGGGTGGTGCGGGTGG................................................................................................................................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000100000000
............................................CACAAAGTGGGACGCGACT-AG.........................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................AAACATAAGCTCGAAAA-----------CA...............................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000100000000000000000000000000000000
....................................................................CTTATCTGCCG-------------------TATCTAGT.................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
.................................................................................................................GACTTTTCCATTGCC-----------CCAA--------C-C-C...............................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................C-AAAACATAAGCTCGAAAA-----------.................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
..........................................CTCACAAAGTGGGACGCGACT-AG.........................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................GTAAATAAA-------C-AAAACATAAGCT..................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................GACGCGACT-AGATCTTATCTG...............................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................TCTGCCG-------------------TATCTAGTTGTAGCCGA........................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....GCCGAACGGGTGGTGCGGGTG.................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................AA-------C-AAAACATAAGCTCGAAA.............................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................CTGCCG-------------------TATCTAGTTGTAGC...........................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
.............................................................................................................................................................................................AAAACATAAGCTCGAAAA-----------CA...............................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....GCCGAACGGGTGGTGCGGGA..................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....GCCGAACGGGTGGTGCGGG...................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
....AGCCGAACGGGTGGTGCGGGTGGATA.............................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000
.......................GTGGATAAGCCCGTGGCCAC................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................TCTTATCTGCCG-------------------TATCTAGT.................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
.............................AAGCCCGTGGCCACTCAC............................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................GGTGGATAAGCCCGTGGCCA.................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
...............................................AAAGTGGGACGCGACT-AG.........................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................AAGTGGGACGCGACT-AGATCT.....................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................TCTGCCG-------------------TATCTAGTTGTAGCCGACT......................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................AAGCCCGTGGCCACTCACAAAGTGGGA...................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
.........................................ACTCACAAAGTGGGACGCGACT-A..........................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................ACTCACAAAGTGGGACGC................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................ACAAAGTGGGACGCGACT-AGA........................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
..............................................CAAAGTGGGACGCGACT-A..........................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......CCGAACGGGTGGTGCGGGT..................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....GCCGAACGGGTGGTGCGG....................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................ATCTGCCG-------------------TATCTAGTTGTAGCCGA........................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................GACT-AGATCTTATCTGCC.............................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................AACATAAGCTCGAAAA-----------CAGAAA...........................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000
....................................................................................................................................................................................................AAGCTCGAAAA-----------CAGAAACAGTC---TTTT...............................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..GTAGCCGAACGGGTGGTGCGGGTGG................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
..................................................................ATCTTATCTGCCG-------------------TATCTA...................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................G-------------------TATCTAGTTGTAGCCGACTT.....................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................GTGGATAAGCCCGTGGCCA.................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................CTTATCTGCCG-------------------TATCTAGTTGT..............................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................AAA-------C-AAAACATAAGCTCGA...............................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
ACGTAGCCGAACGGGTGG.........................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................GACTTTTCCATTGCC-----------CCAA--------C-C-CCCA............................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....AGCCGAACGGGTGGTGCGGGT..................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................GCCCGTGGCCACTCACAAG.........................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................TTGCC-----------CCAA--------C-C-CCCAATAAAT......................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................TCACAAAGTGGGACGCGACT-A..........................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....GCCGAACGGGTGGTGCGGGG..................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................T--AGTAAATAAA-------C-AAAACATAAGCTCGATC.............................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................ATAAGCCCGTGGCCACTCACAAA.........................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
..............................................................................................................................................................................AATAAA-------C-AAAACATAAGCTCGA...............................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
..............................................................................................................................................................................................AAACATAAGCTCGAAAA-----------A................................................................................................................................................................................................................................1830.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
droSim2
ACGTGGCCGAGCGGGTGGTGCGGGTGGACAAGCCCGTATCCACTCACAAGGTGGGACGCGACT-AGATCTTATCTGCCG-------------------TATCTAGTTGTAGCCGACTTTTCCATTGCC-----------CTAA---------CC--CCAATAAATAAT--AGTAAATAAA-------C-AAAACATAAGCTCGAAAA-----------CAGAAACAGTC---TTTTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
......................................................GACGCGACT-AGATCTTATCTGCC.............................................................................................................................................................................................................................................................................................................................................................................2312.00202000000000000000
....................................................GGGACGCGACT-AGATCTTATCTGCC.............................................................................................................................................................................................................................................................................................................................................................................2512.00202000000000000000
..............................................CAAGGTGGGACGCGACT-AGATCTTATC.................................................................................................................................................................................................................................................................................................................................................................................2711.00100100000000000000
........GAGCGGGTGGTGCGGGTGGAC..............................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000000000100000
...................................................TGGGACGCGACT-AGATCTTATC.................................................................................................................................................................................................................................................................................................................................................................................2211.00100000000001000000
..................................................................ATCTTATCTGCCG-------------------TATCTAGTTGT..............................................................................................................................................................................................................................................................................................................................................2411.00100000000000100000
........................................................CGCGACT-AGATCTTATCTGCCG-------------------.........................................................................................................................................................................................................................................................................................................................................................2211.00101000000000000000
...............................................................................................................................................................................ATAAA-------C-AAAACATAAGCTCGAAA.............................................................................................................................................................................................................................................2311.00100010000000000000
......................................................GACGCGACT-AGATCTTATCTGC..............................................................................................................................................................................................................................................................................................................................................................................2211.00100100000000000000
..........................................CTCACAAGGTGGGACGCGACT-...........................................................................................................................................................................................................................................................................................................................................................................................2111.00100100000000000000
..........................................................................TGCCG-------------------TATCTAGTTGTAGCCGACT......................................................................................................................................................................................................................................................................................................................................2411.00100000010000000000
...........................................................................GCCG-------------------TATCTAGTTGTAGCC..........................................................................................................................................................................................................................................................................................................................................1911.00100100000000000000
.................................................................GATCTTATCTGCCG-------------------TATCTAGT.................................................................................................................................................................................................................................................................................................................................................2211.00100100000000000000
...................................................................................................................................................................................A-------C-AAAACATAAGCTCGAA..............................................................................................................................................................................................................................................1811.00100010000000000000
...........................................................................................................................................................................................C-AAAACATAAGCTCGAAAA-----------CAA..............................................................................................................................................................................................................................2211.00101000000000000000
..................................................................ATCTTATCTGCCG-------------------TATCTAGT.................................................................................................................................................................................................................................................................................................................................................2111.00101000000000000000
............................................................................CCG-------------------TATCTAGTTGTAGCCGACT......................................................................................................................................................................................................................................................................................................................................2211.00100100000000000000
..............................................................................................................................................................................AATAAA-------C-AAAACATAAGCTCGAAAA-----------CA...............................................................................................................................................................................................................................2711.00100010000000000000
........................................................CGCGACT-AGATCTTATCTGCC.............................................................................................................................................................................................................................................................................................................................................................................2111.00101000000000000000
.CGTGGCCGAGCGGGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................1590.11100000000001000000
.CGTGGCCGAGCGGGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................15160.06100000000001000000
droSec2
ACGTGGCCGAGCGGGTGGTGCGGGTGGACAAGCCCGTGGCCACTCACAAGGTGGGACGCGACT-AGATCTTATCTGCCG-------------------TATCTAGTTGTAGCCGACTTTTCCATTGCC-----------CTAA--------C-C-CCCAATAAATAAT--AGTAAATAAA-------C-AAAACATAAGCTCGAAAA-----------CAGAAACGGTC---TTTTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.......................GTGGACAAGCCCGTGGCCA.................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020020
.................................................................GATCTTATCTGCCG-------------------TATCTAGT.................................................................................................................................................................................................................................................................................................................................................2212.0021010
.................................................................GATCTTATCTGCCG-------------------TATCTA...................................................................................................................................................................................................................................................................................................................................................2011.0011000
..........................................................................TGCCG-------------------TATCTAGTTGTAGCC..........................................................................................................................................................................................................................................................................................................................................2011.0010010
...TGGCCGAGCGGGTGGTGCGGGTGGAC..............................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010010
.................................................................................................................................................................................AAA-------C-AAAACATAAGCTCGA...............................................................................................................................................................................................................................................1911.0010010
.........................................ACTCACAAGGTGGGACGC................................................................................................................................................................................................................................................................................................................................................................................................1811.0010010
...........CGGGTGGTGCGGGTGGACA.............................................................................................................................................................................................................................................................................................................................................................................................................................1911.0011000
.......................................................................................................................................................................T--AGTAAATAAA-------C-AAAACATAAGCTCGA...............................................................................................................................................................................................................................................2711.0011000
.....................................................GGACGCGACT-AGATCTTATCTGCC.............................................................................................................................................................................................................................................................................................................................................................................2411.0011000
.....GCCGAGCGGGTGGTGCGGGTG.................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100
.CGTGGCCGAGCGGGTGGTGCGG....................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010010
.........AGCGGGTGGTGCGGGTGG................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010001
..........................................CTCACAAGGTGGGACGCGACT-...........................................................................................................................................................................................................................................................................................................................................................................................2111.0010100
...............................................................................................................................................................................ATAAA-------C-AAAACATAAGCTCGAAA.............................................................................................................................................................................................................................................2311.0010010
..GTGGCCGAGCGGGTGGTGCGGGT..................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010010
..........................................................................................................TGTAGCCGACTTTTCCATTGCC-----------................................................................................................................................................................................................................................................................................................................2211.0010010
..................................................................ATCTTATCTGCCG-------------------TATCTAGT.................................................................................................................................................................................................................................................................................................................................................2111.0010010
.............................................................................................................................................................................AAATAAA-------C-AAAACATAAGCTCG................................................................................................................................................................................................................................................2211.0010010
...............................................................................................................................................................................ATAAA-------C-AAAACATAAGCT..................................................................................................................................................................................................................................................1811.0010010
...............................................AAGGTGGGACGCGACT-AGA........................................................................................................................................................................................................................................................................................................................................................................................1911.0010010
............................................CACAAGGTGGGACGCGACT-AGATCTT....................................................................................................................................................................................................................................................................................................................................................................................2611.0010010
.........................................ACTCACAAGGTGGGACGCGACT-AG.........................................................................................................................................................................................................................................................................................................................................................................................2411.0010100
.........................................ACTCACAAGGTGGGACGCGACT-A..........................................................................................................................................................................................................................................................................................................................................................................................2311.0010010
..........................................CTCACAAGGTGGGACGCGACT-A..........................................................................................................................................................................................................................................................................................................................................................................................2211.0010100
..........................................CTCACAAGGTGGGACGCGACT-AG.........................................................................................................................................................................................................................................................................................................................................................................................2311.0010010
.....................................................................................................................TTTCCATTGCC-----------CTAA--------C-C-CCCA............................................................................................................................................................................................................................................................................................2111.0011000
droYak3
ACGTGGCCGAGCGGGTGGTGCGGGTGGACAAGCCCGTGGCCACTCACAAGGTGGGACGCGACT-AGGTCTTATCTCCCG-------------------TATCTAGTTGTAGCCGACTTTTCCATTGCC-----------CTGACCATTTA-C-C-CCCAATAAATAAT--AGTAAATAAA-------C-AAAACATAAGCTCGAAAA-----------CAGAAACAGTC---TTTTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
..............................................CAAGGTGGGACGCGACT-AG.........................................................................................................................................................................................................................................................................................................................................................................................1912.00200000020000
..................................................................GTCTTATCTCCCG-------------------TATCTA...................................................................................................................................................................................................................................................................................................................................................1912.00200020000000
...................................................................................................................................................................................A-------C-AAAACATAAGCTCGAAA.............................................................................................................................................................................................................................................1911.00100100000000
......................GGTGGACAAGCCCGTGGCC..................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100010000000
........................................................................................................GTTGTAGCCGACTTTTCCATTGCC-----------CT..............................................................................................................................................................................................................................................................................................................2611.00100010000000
.......................GTGGACAAGCCCGTGGCC..................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100100000000
...............................................................................................................................................................................ATAAA-------C-AAAACATAAGCTCGA...............................................................................................................................................................................................................................................2111.00100000010000
....................................................................................................................TTTTCCATTGCC-----------CTGACCATTTA-C-C-CCC.............................................................................................................................................................................................................................................................................................2811.00100100000000
...................................................................................................................CTTTTCCATTGCC-----------CTGACCAT........................................................................................................................................................................................................................................................................................................2111.00100000010000
.......CGAGCGGGTGGTGCGGGTGGACAAGCCC........................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000010000
..........................................................................................................TGTAGCCGACTTTTCCATTGC............................................................................................................................................................................................................................................................................................................................2111.00100100000000
.....................................................................TTATCTCCCG-------------------TATCTAGTTGTAGCC..........................................................................................................................................................................................................................................................................................................................................2511.00101000000000
...........................................................GACT-AGGTCTTATCTCCCG-------------------TATCTA...................................................................................................................................................................................................................................................................................................................................................2511.00100100000000
.....................................................................TTATCTCCCG-------------------TATCTAGTTGTAGCCGA........................................................................................................................................................................................................................................................................................................................................2711.00100000010000
..........GCGGGTGGTGCGGGTGGAC..............................................................................................................................................................................................................................................................................................................................................................................................................................1911.00101000000000
..........................................CTCACAAGGTGGGACGCGACT-AG.........................................................................................................................................................................................................................................................................................................................................................................................2311.00100000010000
..........GCGGGTGGTGCGGGTGGA...............................................................................................................................................................................................................................................................................................................................................................................................................................1811.00101000000000
....GGCCGAGCGGGTGGTGCGGGT..................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000010000
.........................GGACAAGCCCGTGGCCACTCACAAGGC.......................................................................................................................................................................................................................................................................................................................................................................................................2711.00100100000000
...............................................AAGGTGGGACGCGACT-AGGTCT.....................................................................................................................................................................................................................................................................................................................................................................................2211.00100000010000
............................................CACAAGGTGGGACGCGACT-AGGT.......................................................................................................................................................................................................................................................................................................................................................................................2311.00100000010000
.....................................................................................................CTAGTTGTAGCCGACTTTTCC.................................................................................................................................................................................................................................................................................................................................2111.00100010000000
.........................GGACAAGCCCGTGGCCACTC..............................................................................................................................................................................................................................................................................................................................................................................................................2011.00100100000000
...........................................TCACAAGGTGGGACGCGAC.............................................................................................................................................................................................................................................................................................................................................................................................1911.00100100000000
..................................................................................................................ACTTTTCCATTGCC-----------CTGACCATTT......................................................................................................................................................................................................................................................................................................2411.00100100000000
............GGGTGGTGCGGGTGGACAAGCCC........................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100100000000
..........................................CTCACAAGGTGGGACGCGACT-AGG........................................................................................................................................................................................................................................................................................................................................................................................2411.00100100000000
.......................................................................................................AGTTGTAGCCGACTTTTCCATTGC............................................................................................................................................................................................................................................................................................................................2411.00100000010000
.............................................................................................................................................................................AAATAAA-------C-AAAACATAAGCTCGA...............................................................................................................................................................................................................................................2311.00100000010000
.....................................................................................................................................................A-C-C-CCCAATAAATAAT--AGTAAAT..........................................................................................................................................................................................................................................................................2311.00101000000000
.....................GGGTGGACAAGCCCGTGGCC..................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100100000000
............................................CACAAGGTGGGACGCGACT-AG.........................................................................................................................................................................................................................................................................................................................................................................................2111.00100000010000
.................GTGCGGGTGGACAAGCCCGTGGCCACT...............................................................................................................................................................................................................................................................................................................................................................................................................2711.00100100000000
.........................................ACTCACAAGGTGGGACGCGACT-...........................................................................................................................................................................................................................................................................................................................................................................................2211.00100000010000
........................................................CGCGACT-AGGTCTTATCTCCCG-------------------TA.......................................................................................................................................................................................................................................................................................................................................................2411.00110000000000
.......................................CCACTCACAAGGTGGGACGC................................................................................................................................................................................................................................................................................................................................................................................................2011.00100100000000
..............GTGGTGCGGGTGGACAAGCCCGTGGC...................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100100000000
.CGTGGCCGAGCGGGTGGTGCGGGT..................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000010000
droEre2
ACGTGGCCGAGCGGGTGGTGCGCGTGGACAAGCCCGTTTCCACCCACAAGGTGGGACGCGACT-AGATCTTATCTGCCG--------------------------------------TGTCCGTGGCC-----------CCAA--------C-C-CCCCATAAATAAT--AGTAAACAAA-------C-AAAACATAAGCTCGAACA-----------CTGAAATAGTC---TTTTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.................................................................GATCTTATCTGCCG--------------------------------------TGTCC.................................................................................................................................................................................................................................................................................................................................1913.0030000030
.....................................................................................................................................................................................................AGCTCGAACA-----------CTGAAATAGT.......................................................................................................................................................................................................................2013.0030100200
.....GCCGAGCGGGTGGTGCGCGT..................................................................................................................................................................................................................................................................................................................................................................................................................................2013.0030000300
.............................................................CT-AGATCTTATCTGCCG--------------------------------------TGTCCGT...............................................................................................................................................................................................................................................................................................................................2413.0031000110
....GGCCGAGCGGGTGGTGCGCGT..................................................................................................................................................................................................................................................................................................................................................................................................................................2113.0030000300
..................................................................ATCTTATCTGCCG--------------------------------------TGTCCGTGGC............................................................................................................................................................................................................................................................................................................................2312.0020002000
.............................................................CT-AGATCTTATCTGCCG--------------------------------------TGTCC.................................................................................................................................................................................................................................................................................................................................2212.0020101000
.................................................................................................................................................................................AAA-------C-AAAACATAAGCTCGAAC.............................................................................................................................................................................................................................................2112.0020100100
.......CGAGCGGGTGGTGCGCGTG.................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000020
................GGTGCGCGTGGACAAGCCC........................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000020
..GTGGCCGAGCGGGTGGTGCGCGT..................................................................................................................................................................................................................................................................................................................................................................................................................................2312.0020000200
............................................................ACT-AGATCTTATCTGCCG--------------------------------------TGT...................................................................................................................................................................................................................................................................................................................................2112.0020001100
..................................................................................................................................................................................AA-------C-AAAACATAAGCTCGAACA-----------CT...............................................................................................................................................................................................................................2312.0020100010
................................................................................................................................................................................CAAA-------C-AAAACATAAGCTCGAACA-----------CTG..............................................................................................................................................................................................................................2611.0011000000
................................................................................................................................................................................CAAA-------C-AAAACATAAGCTCGAACA-----------CTGA.............................................................................................................................................................................................................................2711.0010000010
..............................................................................G--------------------------------------TGTCCGTGGCC-----------CCAA--------C-C-CCCC............................................................................................................................................................................................................................................................................................2211.0010100000
....GGCCGAGCGGGTGGTGCGCGTG.................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000010
.....................................................................TTATCTGCCG--------------------------------------TGTCCGTGGC............................................................................................................................................................................................................................................................................................................................2011.0010000010
..................................................................ATCTTATCTGCCG--------------------------------------TGTCC.................................................................................................................................................................................................................................................................................................................................1811.0010000010
....................................................................CTTATCTGCCG--------------------------------------TGTCCGTG..............................................................................................................................................................................................................................................................................................................................1911.0010000100
..................................................................ATCTTATCTGCCG--------------------------------------TGTCCGT...............................................................................................................................................................................................................................................................................................................................2011.0010000010
...........................................................................................................................................................................................C-AAAACATAAGCTCGAACA-----------CT...............................................................................................................................................................................................................................2111.0010000100
...................................................................TCTTATCTGCCG--------------------------------------TGTCCGTGG.............................................................................................................................................................................................................................................................................................................................2111.0011000000
..........................GACAAGCCCGTTTCCACCCACAAGGT.......................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000010
.....GCCGAGCGGGTGGTGCGCGTGG................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010001000
..................................................................ATCTTATCTGCCG--------------------------------------TGTCCGTGGCC-----------CCA.............................................................................................................................................................................................................................................................................................................2711.0010001000
.........................................................................CTGCCG--------------------------------------TGTCCGTGGCC-----------CCA.............................................................................................................................................................................................................................................................................................................2011.0011000000
............................................CACAAGGTGGGACGCGACT-A..........................................................................................................................................................................................................................................................................................................................................................................................2011.0010010000
.........AGCGGGTGGTGCGCGTGGACA.............................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000010
.................................................................GATCTTATCTGCCG--------------------------------------TGTCCGT...............................................................................................................................................................................................................................................................................................................................2111.0011000000
......CCGAGCGGGTGGTGCGCGTG.................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0011000000
.......................................................................ATCTGCCG--------------------------------------TGTCCGTGGCC-----------C...............................................................................................................................................................................................................................................................................................................2011.0010100000
.......................................................................ATCTGCCG--------------------------------------TGTCCGTGGCC-----------CCAA--------C-C-CCCC............................................................................................................................................................................................................................................................................................2911.0010000010
.........................................................................CTGCCG--------------------------------------TGTCCGTGGCC-----------CCAA--------C-C-CCC.............................................................................................................................................................................................................................................................................................2611.0010000100
...........................................CCACAAGGTGGGACGCGACT-AGAT.......................................................................................................................................................................................................................................................................................................................................................................................2411.0010000100
.........................................................GCGACT-AGATCTTATCTGCCG--------------------------------------......................................................................................................................................................................................................................................................................................................................................2111.0011000000
.....GCCGAGCGGGTGGTGCGC....................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000010
.........................................................GCGACT-AGATCTTATCTGCC.............................................................................................................................................................................................................................................................................................................................................................................2011.0010100000
...........................................................................................................................................................................GTAAACAAA-------C-AAAACATAAGCTCGAACA-----------.................................................................................................................................................................................................................................2811.0010000010
.................GTGCGCGTGGACAAGCCC........................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000010
.............................................................CT-AGATCTTATCTGCCG--------------------------------------TGTCCGTG..............................................................................................................................................................................................................................................................................................................................2511.0010001000
.............................AAGCCCGTTTCCACCCACAAGGT.......................................................................................................................................................................................................................................................................................................................................................................................................2311.0010001000
..................................................................................................................................................................................AA-------C-AAAACATAAGCTCGAACA-----------C................................................................................................................................................................................................................................2211.0010100000
......................................................................................................................GTCCGTGGCC-----------CCAA--------C-C-CCCC............................................................................................................................................................................................................................................................................................2011.0010100000
...........................................................GACT-AGATCTTATCTGCCG--------------------------------------TGTCCGTGG.............................................................................................................................................................................................................................................................................................................................2811.0010100000
....GGCCGAGCGGGTGGTGCGCGTGGAC..............................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000010
ACGTGGCCGAGCGGGTGGTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000010
..........................................................................................................................................................................AGTAAACAAA-------C-AAAACATAAGCTCGAAA.............................................................................................................................................................................................................................................2811.0010000100
...............................................................................................................................................................................ACAAA-------C-AAAACATAAGCTCGA...............................................................................................................................................................................................................................................2111.0010000100
........................................................CGCGACT-AGATCTTATCTGC..............................................................................................................................................................................................................................................................................................................................................................................2011.0010100000
.................................................................................................................................................................................................CATAAGCTCGAACA-----------CTGAAATAGTC---T..................................................................................................................................................................................................................2611.0010000100
............................................................................CCG--------------------------------------TGTCCGTGGCC-----------CCAA--------C-C-................................................................................................................................................................................................................................................................................................2011.0010000100
..GTGGCCGAGCGGGTGGTGCGC....................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010001000
..............................................................................................................................................................................AACAAA-------C-AAAACATAAGCTCGAA..............................................................................................................................................................................................................................................2311.0010000100
.............................................................................................................................................................................AAACAAA-------C-AAAACATAAGCTCGAAA.............................................................................................................................................................................................................................................2511.0010001000
......................CGTGGACAAGCCCGTTTCCA.................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000
.................................................................GATCTTATCTGCCG--------------------------------------TGTCCGTGG.............................................................................................................................................................................................................................................................................................................................2311.0011000000
................................................................................................................................................................................................ACATAAGCTCGAACA-----------CTGAA............................................................................................................................................................................................................................2011.0010001000
........................................................CGCGACT-AGATCTTATCTGCCG--------------------------------------T.....................................................................................................................................................................................................................................................................................................................................2311.0010001000
........................................................................TCTGCCG--------------------------------------TGTCCGTGGCC-----------CCAA--------C-C-CCC.............................................................................................................................................................................................................................................................................................2711.0010100000
.....................................................GGACGCGACT-AGATCTTATCTGCCG--------------------------------------TG....................................................................................................................................................................................................................................................................................................................................2711.0011000000
.......CGAGCGGGTGGTGCGCGT..................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000100
.......CGAGCGGGTGGTGCGCGTGGAC..............................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000010
..................................CGTTTCCACCCACAAGGTGGGACG.................................................................................................................................................................................................................................................................................................................................................................................................2411.0011000000
................................................................AGATCTTATCTGCCG--------------------------------------TGTCCGT...............................................................................................................................................................................................................................................................................................................................2211.0010000100
.......................GTGGACAAGCCCGTTTCCACCCA.............................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100000
.................................................................GATCTTATCTGCCG--------------------------------------TGTCCGTGGCC-----------CCA.............................................................................................................................................................................................................................................................................................................2811.0010100000
................................................AGGTGGGACGCGACT-AGATCTTATCTGCC.............................................................................................................................................................................................................................................................................................................................................................................2911.0010100000
....................................................................CTTATCTGCCG--------------------------------------TGTCCGTGGC............................................................................................................................................................................................................................................................................................................................2111.0010001000
............GGGTGGTGCGCGTGGACA.............................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000010
....................................................................CTTATCTGCCG--------------------------------------TGTCCGTGGCC-----------CC..............................................................................................................................................................................................................................................................................................................2411.0010000100
....................................................................................................................................................................................................AAGCTCGAACA-----------CTGAAATAGT.......................................................................................................................................................................................................................2111.0010000100
..........................................CCCACAAGGTGGGACGCGACT-A..........................................................................................................................................................................................................................................................................................................................................................................................2211.0010100000
......................................................................................................................................................................AT--AGTAAACAAA-------C-AAAACATAAGCT..................................................................................................................................................................................................................................................2511.0011000000
.................................................................GATCTTATCTGCCG--------------------------------------TGTCCGTGGC............................................................................................................................................................................................................................................................................................................................2411.0010000100
..........................GACAAGCCCGTTTCCACCCACAAGGTG......................................................................................................................................................................................................................................................................................................................................................................................................2711.0011000000
......................................................GACGCGACT-AGATCTTATCTGCCG--------------------------------------TGTCC.................................................................................................................................................................................................................................................................................................................................2911.0010100000
...........................................................GACT-AGATCTTATCTGCCG--------------------------------------TGT...................................................................................................................................................................................................................................................................................................................................2211.0010000100
...................................................................................................................................................................................A-------C-AAAACATAAGCTCGAACA-----------.................................................................................................................................................................................................................................2011.0010000100
dp5
ATGTCGCCGAGCGGGTGGTGAGGGTGGACAAGCCCCTGTCCACCCACAAAGTGGGAAGAGATT-AGATATAATCTGATCTTCCCGCTA----------TCTATATAAATATCCGACTTTTCCATTGCC-----------TAA---------TCC--GTCATAAATAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
....CGCCGAGCGGGTGGTGAGGGT..................................................................................................................................................................................................................................................................................................................................................................................................................................2116.0060400002000
..GTCGCCGAGCGGGTGGTGAGGGT..................................................................................................................................................................................................................................................................................................................................................................................................................................2312.0020200000000
................GGTGAGGGTGGACAAGCCCCTGTCCACC...............................................................................................................................................................................................................................................................................................................................................................................................................2812.0020200000000
....CGCCGAGCGGGTGGTGAGG....................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020200000000
....CGCCGAGCGGGTGGTGAGGGTG.................................................................................................................................................................................................................................................................................................................................................................................................................................2212.0020200000000
...........................................................................................................ATATCCGACTTTTCCATTGCC-----------T...............................................................................................................................................................................................................................................................................................................2212.0020110000000
.......................................................................................A----------TCTATATAAATATCCGACTT.....................................................................................................................................................................................................................................................................................................................................2111.0010100000000
.................GTGAGGGTGGACAAGCCCCTGTCCACCCA.............................................................................................................................................................................................................................................................................................................................................................................................................2911.0010100000000
..................................................................................................................ACTTTTCCATTGCC-----------TAA---------TCC--GTC............................................................................................................................................................................................................................................................................................2311.0010010000000
.........................................................................................................................CATTGCC-----------TAA---------TCC--GTCAC..........................................................................................................................................................................................................................................................................................1811.0010010000000
ATGTCGCCGAGCGGGTGGTGAGGGTG.................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000100000
....................................................................................................................TTTTCCATTGCC-----------TAA---------TCC--GTCATAA........................................................................................................................................................................................................................................................................................2511.0010100000000
.........................................................................................................................CATTGCC-----------TAA---------TCC--GTCATAA........................................................................................................................................................................................................................................................................................2011.0010000100000
...................................................................................................CTATATAAATATCCGACTTTTCCATT..............................................................................................................................................................................................................................................................................................................................2611.0010010000000
....................................TGTCCACCCACAAAGTGGGA...................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
.............GGTGGTGAGGGTGGACAAG...........................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000001000
.....................................................................................................................TTTCCATTGCC-----------TAA---------TCC--GTCATA.........................................................................................................................................................................................................................................................................................2311.0010000100000
.....................GGGTGGACAAGCCCCTGTCC..................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010010000000
..............................................................T-AGATATAATCTGATCTTCCCGCT....................................................................................................................................................................................................................................................................................................................................................................2411.0010100000000
ATGTCGCCGAGCGGGTGGTGAGGGT..................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010100000000
...........................................................................................................ATATCCGACTTTTCCATTGC............................................................................................................................................................................................................................................................................................................................2011.0010010000000
.....................................................................................................................TTTCCATTGCC-----------TAA---------TCC--GTC............................................................................................................................................................................................................................................................................................2011.0010010000000
............................................................................................................TATCCGACTTTTCCATTGCC-----------................................................................................................................................................................................................................................................................................................................2011.0010010000000
...................................................................................................CTATATAAATATCCGACTTTTCC.................................................................................................................................................................................................................................................................................................................................2311.0010010000000
....................................................................................................................TTTTCCATTGCC-----------TAA---------TCC--GTCATAAATA.....................................................................................................................................................................................................................................................................................2811.0010100000000
......CCGAGCGGGTGGTGAGGGTGGACAA............................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010100000000
.......................................................................................................ATAAATATCCGACTTTTCCATTGC............................................................................................................................................................................................................................................................................................................................2411.0010000100000
.....GCCGAGCGGGTGGTGAGGGTGGA...............................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100000000
................GGTGAGGGTGGACAAGCCCCTGTCCAC................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010100000000
...................................................................................CGCTA----------TCTATATAAATATCCGAC.......................................................................................................................................................................................................................................................................................................................................2311.0010010000000
..............................................CAAAGTGGGAAGAGATT-AG.........................................................................................................................................................................................................................................................................................................................................................................................1911.0010000100000
...........................................................................................................ATATCCGACTTTTCCATTGCC-----------TA..............................................................................................................................................................................................................................................................................................................2311.0010100000000
.............................AAGCCCCTGTCCACCCACAAAGTGGGA...................................................................................................................................................................................................................................................................................................................................................................................................2711.0010100000000
............................................CACAAAGTGGGAAGAGATT-A..........................................................................................................................................................................................................................................................................................................................................................................................2011.0010000100000
..............GTGGTGAGGGTGGACAAGCCC........................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000100000
.....GCCGAGCGGGTGGTGAGGGTG.................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
................................................................................................................CGACTTTTCCATTGCC-----------TAA---------TCC--GT.............................................................................................................................................................................................................................................................................................2411.0010100000000
droPer2
ATGTCGCCGAGCGGGTGGTGAGGGTGGACAAGCCCCTGTCCACCCACAAAGTGGGAAGAGATT-AGATATAATCTGATCTTCTCGCTA----------TCTATATAAATATCCGACTTTTCCATTGCC-----------TAA---------TCC--GTCATAAATAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
..................................................................ATATAATCTGATCTTCTCGCT....................................................................................................................................................................................................................................................................................................................................................................21113.00131300000
................................................................AGATATAATCTGATCTTCTCGCT....................................................................................................................................................................................................................................................................................................................................................................2318.008800000
...................................................................TATAATCTGATCTTCTCGCT....................................................................................................................................................................................................................................................................................................................................................................2015.005500000
....................................................................ATAATCTGATCTTCTCGCT....................................................................................................................................................................................................................................................................................................................................................................1915.005500000
.................................................................GATATAATCTGATCTTCTCGCT....................................................................................................................................................................................................................................................................................................................................................................2214.004400000
..................................................................ATATAATCTGATCTTCTCGC.....................................................................................................................................................................................................................................................................................................................................................................2013.003300000
..................................................................ATATAATCTGATCTTCTCGCTA----------TCTATAT..................................................................................................................................................................................................................................................................................................................................................2912.002200000
....CGCCGAGCGGGTGGTGAGGGTG.................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001010000
...........................................................................................................ATATCCGACTTTTCCATTGCC-----------T...............................................................................................................................................................................................................................................................................................................2211.001100000
.................................................................GATATAATCTGATCTTCTCGCC....................................................................................................................................................................................................................................................................................................................................................................2211.001100000
......................................................................................................................TTCCATTGCC-----------TAA---------TCC--GTCA...........................................................................................................................................................................................................................................................................................2011.001001000
.................................................................GATATAATCTGATCTTCTCGCG....................................................................................................................................................................................................................................................................................................................................................................2211.001100000
....................................................................ATAATCTGATCTTCTCGCTA----------TC.......................................................................................................................................................................................................................................................................................................................................................2211.001100000
.................................................................GATATAATCTGATCTTCTCGC.....................................................................................................................................................................................................................................................................................................................................................................2111.001100000
....CGCCGAGCGGGTGGTGAGGGT..................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001010000
...........................................................................................................ATATCCGACTTTTCCATTGCC-----------TAA---------TCC--...............................................................................................................................................................................................................................................................................................2711.001010000
.................................................................................................................GACTTTTCCATTGCC-----------TAA---------TCC--...............................................................................................................................................................................................................................................................................................2111.001100000
..................................................................ATATAATCTGATCTTCTCGCC....................................................................................................................................................................................................................................................................................................................................................................2111.001100000
................................................................AGATATAATCTGATCTTCTCGCTA----------TCT......................................................................................................................................................................................................................................................................................................................................................2711.001100000
.........................................................................................................................CATTGCC-----------TAA---------TCC--GTCATAAAT......................................................................................................................................................................................................................................................................................2211.001100000
droWil2
ATGTGGCCGAACGGGTTGTGCGTGTGGACAAGCCTGTGGCCACACATAAAGTGGGTAGAGATT-AGAACATATAAT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
....GGCCGAACGGGTTGTGCGTGTG.................................................................................................................................................................................................................................................................................................................................................................................................................................2214.00400310
.......CGAACGGGTTGTGCGTGT..................................................................................................................................................................................................................................................................................................................................................................................................................................1813.00300120
.......CGAACGGGTTGTGCGTGTG.................................................................................................................................................................................................................................................................................................................................................................................................................................1913.00300300
.................GTGCGTGTGGACAAGCCTGTGGCC..................................................................................................................................................................................................................................................................................................................................................................................................................2412.00200110
....GGCCGAACGGGTTGTGCGTGT..................................................................................................................................................................................................................................................................................................................................................................................................................................2112.00200200
................TGTGCGTGTGGACAAGCCTGTGGC...................................................................................................................................................................................................................................................................................................................................................................................................................2412.00200110
................TGTGCGTGTGGACAAGCCTGT......................................................................................................................................................................................................................................................................................................................................................................................................................2112.00200110
.................GTGCGTGTGGACAAGCCTGT......................................................................................................................................................................................................................................................................................................................................................................................................................2012.00200020
.....GCCGAACGGGTTGTGCGTGT..................................................................................................................................................................................................................................................................................................................................................................................................................................2012.00200200
.................GTGCGTGTGGACAAGCCTGTGG....................................................................................................................................................................................................................................................................................................................................................................................................................2212.00200200
............................................CATAAAGTGGGTAGAGATT-AG.........................................................................................................................................................................................................................................................................................................................................................................................2111.00100010
..GTGGCCGAACGGGTTGTGCGTGT..................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100100
.................GTGCGTGTGGACAAGCCT........................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100010
.............................AAGCCTGTGGCCACACATAAA.........................................................................................................................................................................................................................................................................................................................................................................................................2111.00100010
...........CGGGTTGTGCGTGTGGAC..............................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100010
..............GTTGTGCGTGTGGACAAGCCTGTGGCCA.................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100100
......................................................GTAGAGATT-AGAACATAT..................................................................................................................................................................................................................................................................................................................................................................................1811.00100010
ATGTGGCCGAACGGGTTGTGCGTGT..................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100100
...........CGGGTTGTGCGTGTGGACA.............................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100100
...........................................ACATAAAGTGGGTAGAGATT-AGA........................................................................................................................................................................................................................................................................................................................................................................................2311.00100010
...............TTGTGCGTGTGGACAAGCC.........................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100010
.................................CTGTGGCCACACATAAAGTGGGT...................................................................................................................................................................................................................................................................................................................................................................................................2311.00100010
...................GCGTGTGGACAAGCCTGTGGC...................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100100
..............GTTGTGCGTGTGGACAAGCCTGTGGC...................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100010
.....GCCGAACGGGTTGTGCGTGTGGACAAGCC.........................................................................................................................................................................................................................................................................................................................................................................................................................2911.00100100
......CCGAACGGGTTGTGCGTGTGG................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100010
................TGTGCGTGTGGACAAGCCTGTGGCCA.................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100100
............................................CATAAAGTGGGTAGAGATT-AGA........................................................................................................................................................................................................................................................................................................................................................................................2211.00110000
....GGCCGAACGGGTTGTGCGT....................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100100
...........................................ACATAAAGTGGGTAGAGATT-A..........................................................................................................................................................................................................................................................................................................................................................................................2111.00100100
droVir3
ATGTGGCCGAGCGCGTGGTCCGTGTGGACAAGCCCCTAGCCACGCACAAGGTGGGCAGGGATT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.........................GGACAAGCCCCTAGCCACGCACAA..........................................................................................................................................................................................................................................................................................................................................................................................................2411.001000000000000000000000000000001000000000000000000000000000000000
....................CGTGTGGACAAGCCCCTAGCCA.................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000000000010000000000000000000000000000000000000000
........................................CACGCACAAGGTGGGCAGG................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000000000000000000000000000000000000000000000000010
................GGTCCGTGTGGACAAGCCCCTAGCC..................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000100000000000000000000000000000000000000000000000000000000000
................GGTCCGTGTGGACAAGCCCCTAGCCA.................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000000000000000000000000000001000000000000000000000000000000000
................GGTCCGTGTGGACAAGCCCCTAGC...................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000000000000000000000000000001000000000000000000000000000000000
ATGTGGCCGAGCGCGTGGTCCGT....................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
droMoj3
ACGTAGCGGAGCGGGTGGTGCGCGTCGACAAACCCCTGGCCACCCACAAAGTGGGCAGGGACT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
..............GTGGTGCGCGTCGACAAACCCCTGGC...................................................................................................................................................................................................................................................................................................................................................................................................................2612.002000002
.................GTGCGCGTCGACAAACCCCTGG....................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000001
.........................................ACCCACAAAGTGGGCAGGGACT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------2211.001100000
.......GGAGCGGGTGGTGCGCGT..................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001100000
droGri2
ATGTGGCTGAGCGTGTGGTTCGCGTTGATCCCCCCGCCGACACCCACAAAGTGGGCAGGGACT-GAATCGCCTTTCTCC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/18/2015 at 04:37 AM