ID:

dan_2420

 Coordinate:

scaffold_13337:4756505-4756655 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-19.7 -19.4 -19.4

Flybase annnotation

CDS [Dana\GF24601-cds]; exon [dana_GLEANR_9310:4]; intron [Dana\GF24601-in]

No Repeatable elements found

mature
  1. dan_2420  scaffold_13337:4756514-4756533 -
  2. scaffold_13340:14561044-14561063 -
star

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
GGTGCCCGCCCTTCAGACCATCTCCGTACTGGCCCTCGCCAAAGTTGAAGGTAAGTCATAAGCGAATTCATTCCGGAATATTATCGATTAAGCCTCCAGACGACCTTGAACTGCTCCAGCATTAATCTCTGCGGATCCCCATCAATTTCTATCCACACATTCGGCCCAAAAGAAAAAAACACAACCCAACCATGGTTGTGGTCTGAGCCACAATTTCATCGCACAAGACGTAACCGTCATTAGACGTCATT
**************************************************............(((((....((.(((...(((.....)))...))).)).((..((((.....(((.(((........))))))......))))..)).........)))))................(((((((.......))))))).************************************************** 		Read size # Mismatch Hit Count Total Norm Total M058
embryo
 V039
embryo
 V055
head
 M044
female body
............................................................................................................................................................................AAAAAAACACAACCCAACCA........................................................... 20 0 2 2.50 5 5 0 0 0
..........................................................................................................................................................................CGAAAAAAACGCAACCCAAC............................................................. 20 2 1 2.00 2 2 0 0 0
.............................................................................................................................................................................AAAAAACACAACCCAACCA........................................................... 19 0 2 1.50 3 3 0 0 0
.............................................................................................................................................................................AAAAAACACAACCCCACCA........................................................... 19 1 4 1.25 5 5 0 0 0
............................................................................................................................................................................AAAAAAAAACAACCCAACCA........................................................... 20 1 5 1.20 6 5 1 0 0
............................................................................................................................................................................AAAAACACACAACCCAACCA........................................................... 20 1 2 1.00 2 2 0 0 0
........................................................................................................................................................................AAAGAAAAAAACACAACCCACC............................................................. 22 1 1 1.00 1 1 0 0 0
..........................................................................................................................................................................AGAAAAAAAAACAACCCAACC............................................................ 21 1 1 1.00 1 1 0 0 0
..........................................................................................................................................................................AGAAAAAAAGACAACCCCACCAAGG........................................................ 25 3 1 1.00 1 1 0 0 0
...........................................................................................................................................................................GAAAAAAACACAACCCACC............................................................. 19 1 1 1.00 1 1 0 0 0
........................................................................................................................................................................AAAGAAAAAAAACCAACCCAACC............................................................ 23 2 1 1.00 1 1 0 0 0
...............GACCATCTCCGTACTGGC.......................................................................................................................................................................................................................... 18 0 1 1.00 1 1 0 0 0
......................................................................................................................................................................AAAAAGCAAAAAGCACAACCCAACCA........................................................... 26 3 1 1.00 1 1 0 0 0
..........................................................................................................................................................................AGAAAAAAACACCACCCAA.............................................................. 19 1 1 1.00 1 1 0 0 0
.............................................................................................................................................................................AAAAAACACAACCCTACCA........................................................... 19 1 3 1.00 3 3 0 0 0
............................................................................................................................................................................AAAAAAACACAACCCAACCATT......................................................... 22 1 1 1.00 1 0 1 0 0
...........................................................................................................................................................................GAACAAAACACAACCCAACCA........................................................... 21 1 1 1.00 1 1 0 0 0
.........................................................................................................................................................................AAGAAGAAAACACAACCCAACC............................................................ 22 1 1 1.00 1 1 0 0 0
..............................................................................................................................................................................AAAAACACAACCCAACCA........................................................... 18 0 2 1.00 2 2 0 0 0
..............................................................................................................................................................................AAAAACACAACCCTACCA........................................................... 18 1 3 0.67 2 2 0 0 0
.......................................................................................................................................................................AAAGAAGAAAAACACAACCCAACCA........................................................... 25 3 2 0.50 1 1 0 0 0
.............................................................................................................................................................................TAAAAACACAACCCAACCATA......................................................... 21 2 2 0.50 1 1 0 0 0
...............................................................................................................GGATCCACCATTAATCTCTGC....................................................................................................................... 21 3 2 0.50 1 1 0 0 0
............................................................................................................................................................................AAAAAAACACAACCCAACC............................................................ 19 0 2 0.50 1 1 0 0 0
............................................................................................................................................................................AAAAGAACACAACCCAACC............................................................ 19 1 2 0.50 1 0 1 0 0
............................................................................................................................................................................AGAAAAACACAACCCAACCA........................................................... 20 1 2 0.50 1 1 0 0 0
..............................................................................................................................................................................AAAGACACAACCCAACCA........................................................... 18 1 2 0.50 1 1 0 0 0
.............................................................................................................................................................................ATAAAACACAACCCAACCA........................................................... 19 1 2 0.50 1 1 0 0 0
..........................................................................................................................................................................AGAAAAAAAGACAACCCACC............................................................. 20 2 2 0.50 1 1 0 0 0
............................................................................................................................................................................AAAAAAACACCACCCAACCA........................................................... 20 1 2 0.50 1 1 0 0 0
..........................................................................................................................................................................TTAAAAAAACACAACCCAACCA........................................................... 22 2 2 0.50 1 1 0 0 0
............................................................................................................................................................................AAAACAACACAACCCAACCA........................................................... 20 1 2 0.50 1 1 0 0 0
.............................................................................................................................................................................AAAAAACACACCCCAACCA........................................................... 19 1 2 0.50 1 1 0 0 0
............................................................................................................................................................................AAAAAAACACGACCCAACC............................................................ 19 1 2 0.50 1 1 0 0 0
...........................................................................................................................................................................GGCAAAAACACAACCCAACCA........................................................... 21 2 2 0.50 1 1 0 0 0
.........................................................................................................................................................................AACAAAAAAAGACAACCCAACCA........................................................... 23 2 2 0.50 1 0 1 0 0
.............................................................................................................................................................................AAATAACACAACCCAACCA........................................................... 19 1 2 0.50 1 1 0 0 0
.............................................................................................................................................................................AAAAAAAACAACCCAACCA........................................................... 19 1 6 0.50 3 3 0 0 0
............................................................................................................................................................................AAAAAAACACAGCCCAACCA........................................................... 20 1 2 0.50 1 1 0 0 0
...........................................................................................................................................................................TAAAAAAACACAACCCAACC............................................................ 20 1 2 0.50 1 1 0 0 0
.............................................................................................................................................................................AAAGAACACAACCCAACCA........................................................... 19 1 2 0.50 1 1 0 0 0
..........................................................................................................................................................................AGAAAAAGAAACAACCCAACC............................................................ 21 2 2 0.50 1 1 0 0 0
............................................................................................................................................................................AGAAAAACACAACCCAACC............................................................ 19 1 3 0.33 1 1 0 0 0
...........................................................................................................................................................................GATAAAACCACAACCCAACC............................................................ 20 2 3 0.33 1 1 0 0 0
............................................................................................................................................................................AAAAAAACACAACCCCACCA........................................................... 20 1 3 0.33 1 1 0 0 0
............................................................................................................................................................................AAATTAACACAACCCAACCA........................................................... 20 2 3 0.33 1 0 1 0 0
............................................................................................................................................................................AAAAAAACACAACCCTACCA........................................................... 20 1 3 0.33 1 1 0 0 0
.......................................................................................................................................................................AAAAAAAGAAAACACAACCCTACCA........................................................... 25 3 3 0.33 1 1 0 0 0
........................................................................................................................................................................ATAGAAAAGAACACAACCAAACCA........................................................... 24 3 3 0.33 1 1 0 0 0
............................................................................................................................................................................AAAAAAACACCACCCTACCA........................................................... 20 2 3 0.33 1 1 0 0 0
......................................................................................................................................................................CAAAAAAACAAAACACAACCCCACCA........................................................... 26 3 3 0.33 1 1 0 0 0
.............................................................................................................................................................................AAAAAACACAACCCACCCA........................................................... 19 1 3 0.33 1 0 1 0 0
........................................................................................................................................................................AAAACAAAAAACACAACCCAACCA........................................................... 24 2 3 0.33 1 1 0 0 0
..............................................................................................................................................................................AAAAAAACAACCCAACCA........................................................... 18 1 10 0.30 3 3 0 0 0
........................................................................................................................................................................AAAAAACAAAACACAACCCAACC............................................................ 23 2 4 0.25 1 1 0 0 0
............................................................................................................................................................................AAAACAACACAACCCAAC............................................................. 18 1 4 0.25 1 1 0 0 0
............................................................................................................................................................................AAAAAAACACAACCCCACC............................................................ 19 1 4 0.25 1 1 0 0 0
.............................................................................................................................................................................GAAAAACACAACCCGACCA........................................................... 19 2 4 0.25 1 0 1 0 0
.............................................................................................................................................................................AGAACACACAACCCAACCA........................................................... 19 2 4 0.25 1 1 0 0 0
............................................................................................................................................................................AAAAAGACGCAACCCAACCA........................................................... 20 2 4 0.25 1 1 0 0 0
..........................................................................................................................................................................AGACCACAACACAACCCAACCA........................................................... 22 3 4 0.25 1 1 0 0 0
............................................................................................................................................................................AAAAAAAAACAACCCAACC............................................................ 19 1 9 0.22 2 2 0 0 0
............................................................................................................................................................................AAAGAACCACAACCCAACCA........................................................... 20 2 5 0.20 1 1 0 0 0
...........................................................................................................................................................................GAAAAAAGCACAACCCGCCCA........................................................... 21 3 5 0.20 1 1 0 0 0
..........................................................................................................................................................................AGAAAAAAAAACAACCCACCC............................................................ 21 2 5 0.20 1 1 0 0 0
............................................................................................................................................................................AAGAAAACACAACCCTACCA........................................................... 20 2 5 0.20 1 1 0 0 0
............................................................................................................................................................................GAAAAAACACAACCCCACCA........................................................... 20 2 5 0.20 1 1 0 0 0
...........................................................................................................................................................................GAAAAAAACACAACCCAGCCACC......................................................... 23 3 5 0.20 1 1 0 0 0
.............................................................................................................................................................................AAAAAACACAACCCTACC............................................................ 18 1 5 0.20 1 1 0 0 0
............................................................................................................................................................................AAAAAAATACAACCCTACCA........................................................... 20 2 5 0.20 1 1 0 0 0
........................................................................................................................................................................AAAGAGAAAACCACAACCCTAC............................................................. 22 3 5 0.20 1 1 0 0 0
.............................................................................................................................................................................AAAAACCACAACCCAACCA........................................................... 19 1 6 0.17 1 1 0 0 0
.......................................................................................................................................................................AAAAGAAAAAAACCCTACCC................................................................ 20 2 6 0.17 1 1 0 0 0
..........................................................................................................................................................................AGAAAAAAACACAACCCACCA............................................................ 21 2 6 0.17 1 1 0 0 0
.............................................................................................................................................................................ACAAAACACAACCCAACCAC.......................................................... 20 2 6 0.17 1 1 0 0 0
.............................................................................................................................................................................AAAACACACAACCCTACCA........................................................... 19 2 6 0.17 1 1 0 0 0
.............................................................................................................................................................................AAATAAAACAACCCAACCA........................................................... 19 2 19 0.16 3 3 0 0 0
...........................................................................................................................................................................GAAACAAACACAACCCACC............................................................. 19 2 7 0.14 1 1 0 0 0
............................................................................................................................................................................ACAACAACACAACCCAACCA........................................................... 20 2 7 0.14 1 1 0 0 0
.....................................................................................................................................................................CCAAAGGACAAAAACACCACC................................................................. 21 3 7 0.14 1 1 0 0 0
.............................................................................................................................................................................AAAAAACACAACCCCACC............................................................ 18 1 7 0.14 1 1 0 0 0
............................................................................................................................................................................AAAAAAACACAACCAAACCA........................................................... 20 1 7 0.14 1 1 0 0 0
............................................................................................................................................................................AAAAAAAAACAACCCTACCA........................................................... 20 2 15 0.13 2 2 0 0 0
............................................................................................................................................................................AAAAAAACACAAACCAACCA........................................................... 20 1 8 0.13 1 1 0 0 0
.......................................................................................................................................................................AAAAGAAAAAAACCAACCCCAACC............................................................ 24 3 8 0.13 1 1 0 0 0
............................................................................................................................................................................AATAAAACACAACCCAACC............................................................ 19 1 8 0.13 1 1 0 0 0
.........................................................................................................................................................................AAGAAAAGAACACCACCCACCC............................................................ 22 3 8 0.13 1 1 0 0 0
........................................................................................................................................................................AAAGAAAAAAACAAAACCCA............................................................... 20 1 8 0.13 1 0 1 0 0
......................................................................................................................................................................CAAAAGAAAAAAAGACCACC................................................................. 20 2 9 0.11 1 1 0 0 0
...........................................................................................................................................................................GAAGACAAGACAACCCAACCA........................................................... 21 3 9 0.11 1 1 0 0 0
............................................................................................................................................................................AAAAAAACACTACCAAACCA........................................................... 20 2 9 0.11 1 1 0 0 0
............................................................................................................................................................................AAAAAAACACAACCCACC............................................................. 18 1 9 0.11 1 1 0 0 0
............................................................................................................................................................................AAAAAAATACAACCCCACCA........................................................... 20 2 9 0.11 1 1 0 0 0
..............................................................................................................................................................................AAAAACACAACCCAACCACC......................................................... 20 2 9 0.11 1 1 0 0 0
......................................................................................................................................................................AAAAAAAAAAGAACACAACCCAACC............................................................ 25 3 9 0.11 1 1 0 0 0
........................................................................................................................................................................AAAGAAAAAATCACACCCCA............................................................... 20 2 9 0.11 1 1 0 0 0
........................................................................................................................................................................AAAGAAGAAAACAGAACCAAACC............................................................ 23 3 10 0.10 1 1 0 0 0
.............................................................................................................................................................................AAATAACACAACCCCACCA........................................................... 19 2 10 0.10 1 1 0 0 0
............................................................................................................................................................................CAAACAACACAACCCAACCA........................................................... 20 2 10 0.10 1 1 0 0 0
............................................................................................................................................................................AAAAAACAACAACCCAACCA........................................................... 20 2 20 0.10 2 2 0 0 0
............................................................................................................................................................................AAAACAAAACAACCCAACCA........................................................... 20 2 20 0.10 2 2 0 0 0
.............................................................................................................................................................................AAAACAAACAACCCAACCA........................................................... 19 2 20 0.10 2 2 0 0 0
...........................................................................................................................................................................GAAAAAACCACAACCCCAC............................................................. 19 2 10 0.10 1 1 0 0 0
.......................................................................................................................................................................AAAAGAAAAAAACAAAACC................................................................. 19 1 20 0.10 2 2 0 0 0
........................................................................................................................................................................AAAAAAAACAACACAACCCAAC............................................................. 22 2 10 0.10 1 1 0 0 0
............................................................................................................................................................................AAAAAAAGACAACCCACCCA........................................................... 20 2 10 0.10 1 1 0 0 0
..........................................................................................................................................................................ACAAACCAACACAACCCAACCA........................................................... 22 3 11 0.09 1 1 0 0 0
.......................................................................................................................................................................AAAAAACAAAAACACAACCCCACC............................................................ 24 3 11 0.09 1 1 0 0 0
......................................................................................................................................................................CAAAAGAAAACAACCCTACCC................................................................ 21 3 11 0.09 1 1 0 0 0
..............................................................................................................................................................................TAAAACGCAACCCAACCA........................................................... 18 2 12 0.08 1 1 0 0 0
..............................................................................................................................................................................AACAACACAACCCTACCA........................................................... 18 2 12 0.08 1 1 0 0 0
......................................................................................................................................................................CAAAAAAAAAAAACACAACCCACCA............................................................ 25 3 12 0.08 1 1 0 0 0
.........................................................................................................................................................................AAGAAAGAAACCCAACCCA............................................................... 19 2 12 0.08 1 1 0 0 0
.......................................................................................................................................................................AAAAGAAAACAACACACCCC................................................................ 20 2 13 0.08 1 1 0 0 0
............................................................................................................................................................................AAAAGAACACAACCCACCCAG.......................................................... 21 3 13 0.08 1 1 0 0 0
....................................................................................................................................................................CCAAAAAGAACAAAACAAAACCCA............................................................... 24 3 13 0.08 1 1 0 0 0
..............................................................................................................................................................................GACAACACAACCCAACCA........................................................... 18 2 13 0.08 1 1 0 0 0
.............................................................................................................................................................................AAAAATTACAACCCAACCA........................................................... 19 2 14 0.07 1 1 0 0 0
...........................................................................................................................................................................GAAAAAAAGACACCCCAAC............................................................. 19 2 14 0.07 1 1 0 0 0
............................................................................................................................................................................AAAAAAGAACAACCCAACCA........................................................... 20 2 15 0.07 1 1 0 0 0
............................................................................................................................................................................AAAAAAACACAACCCCCCCA........................................................... 20 2 15 0.07 1 1 0 0 0
.............................................................................................................................................................................AAAAAACAGAACTCAACCA........................................................... 19 2 16 0.06 1 1 0 0 0
.....................................................................................................................................................................CCAAAAGAGAAACACTCAACC................................................................. 21 3 17 0.06 1 1 0 0 0
........................................................................................................................................................................AAAGAAAAACACCCAACCC................................................................ 19 2 18 0.06 1 1 0 0 0
.........................................................................................................................................................................AAGAAAAAACCGCAACCCA............................................................... 19 2 18 0.06 1 1 0 0 0
............................................................................................................................................................................AAAAGAACACAACCAAACCA........................................................... 20 2 18 0.06 1 0 1 0 0
............................................................................................................................................................................ACAAAAAAACAACCCAACCA........................................................... 20 2 18 0.06 1 1 0 0 0
.............................................................................................................................................................................AAAAAACACAACCCTCCCA........................................................... 19 2 18 0.06 1 1 0 0 0
.........................................................................................................................................................................AAGAAAAAACCAGAACCCA............................................................... 19 2 19 0.05 1 1 0 0 0
..........................................................................................................................................................................ATAAAAAAGAACAACCCAACCA........................................................... 22 3 19 0.05 1 1 0 0 0
..........................................................................................................................................................................AGAAACAAACAAAACCCAAC............................................................. 20 2 19 0.05 1 1 0 0 0
............................................................................................................................................................................AAAAAAACACAACCAAACC............................................................ 19 1 19 0.05 1 1 0 0 0
............................................................................................................................................................................AACAAACCACAACCCAACC............................................................ 19 2 19 0.05 1 1 0 0 0
..TGCCCGCCCTTCAGCACAG...................................................................................................................................................................................................................................... 19 3 20 0.05 1 0 0 1 0
............................................................................................................................................................................AAACTAACACAACCCACCCA........................................................... 20 3 20 0.05 1 1 0 0 0
.....................................ACCAATTTTGAAGGTAAGTCA................................................................................................................................................................................................. 21 3 20 0.05 1 0 0 1 0
..........................................................................................................................................................................AGAAAAAAAGACAACCCACCA............................................................ 21 3 20 0.05 1 1 0 0 0
............................................................................................................................................................................AAAAAAAAACAACCCGACC............................................................ 19 2 20 0.05 1 1 0 0 0
.............................................................................................................................................................................AAAAAACAGAATCCAACCA........................................................... 19 2 20 0.05 1 1 0 0 0
.......................................................................................................................................................................GAAGGAAAAAAACACCACCC................................................................ 20 3 20 0.05 1 1 0 0 0
......................................................ATCATAAGGGAATGCATTC.................................................................................................................................................................................. 19 3 20 0.05 1 0 0 0 1
...............................................................................................................................................................................AAAAAACAACCCAACCAAG......................................................... 19 2 20 0.05 1 1 0 0 0
............................................................................................................................................................................AAAAAAAAACAACCCAACCC........................................................... 20 2 20 0.05 1 1 0 0 0
............................................................................................................................................................................AAAAACAAACAACCCAACCA........................................................... 20 2 20 0.05 1 1 0 0 0
......................TTGGAACTGGCCCTCGCCA.................................................................................................................................................................................................................. 19 3 20 0.05 1 0 0 1 0
.............................................................................................................................................................................AAAAGAAACAACCCAACCA........................................................... 19 2 20 0.05 1 0 1 0 0
............................................................................................................................................................................AAAAAAACACAACCATACCA........................................................... 20 2 20 0.05 1 1 0 0 0
.............................................................................................................................................................................AAAAAACACAACCCCCCCA........................................................... 19 2 20 0.05 1 1 0 0 0
.......................................................................................................................................................................AAAAGAAAAAAAAACAACCCCACA............................................................ 24 3 20 0.05 1 1 0 0 0
..........................................................................................................................................................................AGAAAAAAACACACCCCAAA............................................................. 20 2 20 0.05 1 1 0 0 0
..............................................................................................................................................................................AAAAAGACAACCCCACCA........................................................... 18 2 20 0.05 1 1 0 0 0
............................................................................................................................................................................AACAAAAAACAACCCAACCA........................................................... 20 2 20 0.05 1 1 0 0 0
...........................................................................................................................................................................GAAAAAAAAACAACCCACC............................................................. 19 2 20 0.05 1 1 0 0 0
............................................................................................................................................................................AAAAAATCACGACCCCACCA........................................................... 20 3 20 0.05 1 1 0 0 0
...........................................................................................................................................................................GAATAAAACACAACCCACCA............................................................ 20 3 20 0.05 1 1 0 0 0
..............................................................................................................................................................................AGCAACACAACCCAACCA........................................................... 18 2 20 0.05 1 1 0 0 0
.......................................................................................................................................................................AAAGGAAAAAAACATAACC................................................................. 19 2 20 0.05 1 1 0 0 0
.......................................................................................................................................................................GAAAGAAGAAGACACAACCC................................................................ 20 3 20 0.05 1 0 1 0 0
.............................................................................................................................................................................AAACACCACAACCCAACCA........................................................... 19 2 20 0.05 1 1 0 0 0
..........................................................................................................................................................................AGAAACAAAAACAACCCTACCA........................................................... 22 3 20 0.05 1 1 0 0 0
.............................................................................................................................................................................AAAAAACACACCCCAAACA........................................................... 19 2 20 0.05 1 1 0 0 0
.........................................................................................................................................................................AAGAAAAAAACACAGCACCACC............................................................ 22 3 20 0.05 1 1 0 0 0
..........................................................................................................................................................................GGAAAAAAAAACAACCCTACC............................................................ 21 3 20 0.05 1 1 0 0 0
............................................................................................................................................................................AACAAAAAACAACCCAACC............................................................ 19 2 20 0.05 1 1 0 0 0
........................................................................................................................................................................AAACAAAAAAACACAACCCACCA............................................................ 23 3 20 0.05 1 1 0 0 0

Anti-sense strand reads

CCACGGGCGGGAAGTCTGGTAGAGGCATGACCGGGAGCGGTTTCAACTTCCATTCAGTATTCGCTTAAGTAAGGCCTTATAATAGCTAATTCGGAGGTCTGCTGGAACTTGACGAGGTCGTAATTAGAGACGCCTAGGGGTAGTTAAAGATAGGTGTGTAAGCCGGGTTTTCTTTTTTTGTGTTGGGTTGGTACCAACACCAGACTCGGTGTTAAAGTAGCGTGTTCTGCATTGGCAGTAATCTGCAGTAA
**************************************************............(((((....((.(((...(((.....)))...))).)).((..((((.....(((.(((........))))))......))))..)).........)))))................(((((((.......))))))).************************************************** 		Read size # Mismatch Hit Count Total Norm Total V106
head
 V055
head
 M044
female body
 M058
embryo
 V105
male body
.................................................................................................................................ACGCCCAGGGGCAGTTAAGGA..................................................................................................... 21 3 1 3.00 3 2 1 0 0 0
.................................................................................................................................ACGCCCAGGGGCAGTTAAGG...................................................................................................... 20 3 6 1.50 9 6 1 1 1 0
..................................................................................................................................CGCCTAGGGGCAGTTAAGGA..................................................................................................... 20 2 1 1.00 1 0 1 0 0 0
...............................................................................................................................ACACGCCCAGGGGCAGTTAA........................................................................................................ 20 3 3 0.67 2 2 0 0 0 0
..................................................................................................................................CGCCCAGGGGCAGTTAAGGA..................................................................................................... 20 3 8 0.63 5 0 5 0 0 0
...........................................................................................................................................................................................................................GTGCGTTCTGCATTGGCCGTA........... 21 3 3 0.33 1 0 1 0 0 0
...............................................................................................................................ACACGCCCAGGGGCAGTTA......................................................................................................... 19 3 17 0.29 5 0 3 1 0 1
...................................................................................................................................GCCCAGGGGCAGTTAAGGA..................................................................................................... 19 3 13 0.15 2 0 2 0 0 0
.................................................................................................................................ACGCCCAGGGGGAGTTAAGG...................................................................................................... 20 3 8 0.13 1 0 0 1 0 0
................................................................................................................................................................................................ACCAAAACAAGACCCGGTGTT...................................... 21 3 8 0.13 1 0 0 0 1 0
.................................................................................................................................ACGCCCGGGGGCAGTTAAA....................................................................................................... 19 3 16 0.13 2 0 0 1 0 1
.............................................................................................................................................................................................................TCGGTGTTAAAGTAGGTT............................ 18 2 20 0.10 2 2 0 0 0 0
..........................ATGACAGGGAGCGGGTT................................................................................................................................................................................................................ 17 2 12 0.08 1 0 1 0 0 0
................................................................................................................................CACGCCCAGGGGCAGTTA......................................................................................................... 18 3 20 0.05 1 0 0 1 0 0
................................................................................................................................CACGCCCAGGGGCAGTTAA........................................................................................................ 19 3 20 0.05 1 0 0 0 1 0
....................................................................................................................................................................................................ACACCAGACTAGTTATTAAA................................... 20 3 20 0.05 1 0 0 0 1 0
........................GCATGAACGGAAGCGGTAT................................................................................................................................................................................................................ 19 3 20 0.05 1 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droAna3 scaffold_13337:4756455-4756705 - dan_2420 GGTGCCCGCCCTTCAGACCATCTCCGTACTGGCCCTCGCCAAAGTTGAAGGTAAGTCA------TAAGCGA-------ATT-CATTC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGGAATATTATCGATTAA--GCCTCC-------------AGACGACCTTGAACT-------GCTCCAGCATTAATCTC--TGCGGAT--CCCC------------ATCAATTTCTATC------------------------------------------------------------------------CACACATTCGGC--CC-A--A--AAGAAA------AAAACACAACCCAA------CCATG------------GTTGTGGTCT---G--AGCCACAA-----------------------TTTCATCGCACAAGACGTAACCGTCATTAGACGTCATT-
droBip1 scf7180000396371:83038-83286 - GGTGCCAGCCCTTCAGACCATCTCCGTACTCGCCCTGGCTAAAGTTGAAGGTAAGTCA------TACACCA-------ATC-CATCC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGGAATATTATCGATTAA---GCATCC------------AGACGACCTTGAACT-------GCTGAAGCATTAATCTC--TGTGGATCGCCAC------------ATCAATTACTCTC------------------------------------------------------------------------CACACATTCTAC--CC-A--AAAAAGAAAAAAACAAAAACCCAACCCAA------CCATC------------GTTGTGGTTT---G--AG---CAA-----------------------TTTCATCGT---------AACCGTCATTAGACGTCATT-
droKik1 scf7180000302441:352093-352348 + GGTGCCAGCCCTCCAGACCATCTCTGTGCTGGCCCTGGCTAAAGTTGAAGGTAAGTTT-----CGATTGAA-------TTT-CAGGA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T--AATATTATCGATTA--AGCCACCAACTCGTGT----GTGCGACCTTGAACC-------CTCAAAACATTAATCTCTCCCTGGAT--TCAC------------ATAAATTTCTAT-------------------------------------------------------------------------CACACACAAAAC--AC-ACAAGAA-----------AGA-----------------ACATCTTAAGTAGGG--CCTGCGGTTG--GG--AG---CAA-----------------------TTTCATCGCGTAAGACGAAACCGTCATTAGACATCATT-
droFic1 scf7180000453784:647758-648000 + GGTCCCCGCCCTCCAAACAATCTCCGTGCTGGCTCTCGCAAAAGTTGAAGGTAAGTTG------CGCCGAA-------ATC-GAGGC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGATTATTATCGATTAT---CCACCA------------GTGCGACCTTGATCC-------GCTGGCGCATTAATCTC--CCAGAGT--CCAC------------ATCAAATTCCATCG-----------------------------------------------------------------------CACACACTCCGC--CC-A-----------------ATAACTTAACTCAG------CCATC------------GCTGCGGTTT--GG--GG---CAA-----------------------TTTCAACGCGTAAGACGAAACCGTCATTAGACATCATT-
droEle1 scf7180000491199:1415282-1415522 + GGTTCCCGCCCTCCAGACCATCTCCGTGCTGGCCCTGGCCAAAGTTGAAGGTAAGTTT------GGCTGTG-------ATC-CGGGC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGGATTATTATCGATTAG---CCACCA------------GTGCGACCTTGATCC-------GGTGGCGCATTAATCCA--TCTGAGT--CCAC------------ATCAATTTCTAT-------------------------------------------------------------------------CACACACTCCGC--CC-A-----------------TAGACTTAACTCCA------CCATA------------GCTGCGGTTT--TG--GG---CTA-----------------------TTTCAACGCGTAAGGCGAAACCGTCATTAGACATCATT-
droRho1 scf7180000769112:54582-54822 - GGTTCCCGCCCTCCAGACCATCTCCGTGCTGGCCCTGGCCAAAGTTGAAGGTAAGTCG------GGTTGGG-------ATC-CAGGC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGATTATTATCGATTAG---CCACCA------------ATGCGACCTTGATCC-------GGTGGCGCATTAATCTC--CCTGAGT--CCAC------------ATCAATTTCTAT-------------------------------------------------------------------------CACACACTCCGC--CC-A-----------------AAGACTTAACTCCA------CCGGC------------GCTGCGGTTT--CG--GG---CAA-----------------------TTTCAACGCGTAAGACGAAACCGTCATTAGACATCATT-
droBia1 scf7180000302428:5582733-5582977 - GGTGCCCGCCCTCCAGACCATCTCCGTGCTGGCCCTGGCCAAAGTTGAAGGTAAGTTG------GCTTGAG-------ATC-CGGCC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGATTATTATCGATTAG---CCACCA------------ATGCGACCTTGATCC-------GCTGCCGCATTAATCTC--CCACCGT--CCAC------------ATCAATTTCTAT-------------------------------------------------------------------------CACACACTCCTC--CC-C--A--------------AAAACCCAACTCAG------CCAAC---------GCTGCTGCGGTTT--TG--GG---CAA-----------------------TTTGAACGCGTAAGACGAAACCGTCATTAGACATCATT-
droTak1 scf7180000415235:84241-84486 + GGTGCCCGCCCTCCAGACCATCTCCGTGCTGGCCCTGGCCAAAGTTGAAGGTAAGTTG------GATTGAA-------ATC-CAGGC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGATTATTATCGATTAG---CCACCA------------ATGCGACCTTGATCC-------GGCGACGCATTAATCTC--CCACAGT--CCAC------------ATCAATTTCTAT-------------------------------------------------------------------------CACACACTCCGC--CC-A-----------------A-AACTTAACTCAAACCCAACCATC------------GCTGCGGTTT--CT--GG---CAA-----------------------TTTCAACGCGTAAGACGAAGCCGTCATTAGACATCATT-
droEug1 scf7180000409456:524055-524293 + GGTGCCTGCCCTTCAAACCATCTCTGTACTGGCCCTGGCTAAAGTTGAAGGTAAGTTG------GATTGAATTTCTAGATC-TGGTC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGATTATTATCGATTAT----------------------AGCGACCTTGAT-------------------TGATCTC--TCTC----------------------------TCTCTCG-----------G--------------------------------------------------AGTTCCAATCACACATTCAACGCCCCCCGAAAA-----------AGAAGTTAACTCTA------ACATT------------GCTGCGGTTTTTTG--GG---CAA-----------------------TTTCAAAGCGTTAGACGAAACCGTCATTAGACATCATTT
dm3 chr3L:14310388-14310629 + GGTGCCCGCCCTTCAGACCATCTCCGTTCTGGCCCTGGCTAAAGTTGAAGGTAAGTTC------TGTGGAA-------ATC-CCGGC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGATTATTATCGATTATCAACCACCA------------ATGCGACCTTGATCC-------GGTGGCTCATTAATCTC--CTCGAAT--CCAC------------ATCAATTTCTAT-------------------------------------------------------------------------CACGCACTCCGC--CC-A-----------------A-AACTTTACTCAG------CCATC------------GTTGCGGTTT---G--GG---CAA-----------------------TTTCAACGCGTTAGACGAAACCGTCATTAGACATCATT-
droSim2 3l:13972329-13972570 + dsi_4934 GGTGCCCGCCCTTCAGACCATCTCCGTTCTGGCCCTGGCTAAAGTTGAAGGTAAGTTC------TGTGGAA-------ATC-CCGGC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGATTATTATCGATTATCAACCACCA------------ATGCGACCTTGATCC-------GGTGGCTCATTAATCTC--CCCGAAT--CCAC------------ATCAATTTCTAT-------------------------------------------------------------------------CACACACTCCGC--CC-A-----------------A-AACTTTACTCAG------CCATC------------GCTGCGGTTA---G--GG---CAA-----------------------TTTCAACGCGTAAGACGAAACCGTCATTAGACATCATT-
droSec2 scaffold_0:6447790-6448031 + GGTGCCCGCCCTTCAGACCATCTCCGTTCTGGCCCTGGCTAAAGTTGAAGGTAAGTTC------TGTTGAA-------ATC-CCGGC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGATTATTATCGATTATCAACCACCA------------ATGCGACCTTGATCC-------GGTGGCTCATTAATCTC--CCCGAAT--CCAC------------ATCAATTTCTAT-------------------------------------------------------------------------CACACACTCCGC--CC-A-----------------A-AACTTTACTCAG------CCATC------------GTTGCGGTTT---G--GG---CAA-----------------------TTTCAACGCGTAAGACGAAACCGTCATTAGACATCATT-
droYak3 3L:14400038-14400291 + GGTGCCCGCCCTGCAGACCATCTCCGTTCTGGCGCTGGCCAAAGTTGAAGGTAAGTTC------TGCTGCA-------ATCCCCGCC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGATTATTATCGATTATCAGCCAGCAAAT---ATACCAATGCGACCTTGATCC-------AGTGGCTCATTAATCTG--CCCGAGT--CCAC------------ATCAATTTCCAT-------------------------------------------------------------------------CACACACTCCGC--CC-A-----------------A-AACTTTACTCAG------CCATC---------G--GCTGCGGTTT--TG--GG---CAA-----------------------TTTCAGCGCGTAAGACGAAACCGTCATTAGACATCATT-
droEre2 scaffold_4784:14292547-14292789 + GGTGCCCGCCCTTCAGACCATCTCCGTTCTGGCCCTGGCTAAAGTTGAAGGTAAGTGC------TATCGAA-------ATC-CCGGC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGATTATTATCGATTATCAGCCACCA------------AAGCGACCTTGATCC-------GGTGGCTCATTAATCTA--CCCGAAT--CCAC------------ATCAATTTCTAT-------------------------------------------------------------------------CACACACTCCAC--CC-C-----------------AAAACTTTACTCAG------CCATC------------GCTGCGGTTT---C--GG---CAA-----------------------TTTCAACGCGTAAGTCGAAACCGTCATTAGACATCATT-
dp5 XR_group6:6988505-6988808 + GGTGCCCGCCCTGCAGACCATCTCCGTCCTGGCCCTGGCCAAAGTTGAAGGTAAGTCC------ACC---------------CCCAC-----------------------------------------------------------------------------AAAATACAAAAAAA------------------AAGAAATAA-----------------------------------CCGAAAAGAAAACAAA-AAAAGAAAATATTATTATTGTTATTGATTTA---CTAACA------------CAGCGACCTTGAACC------TGGGGGTTCATTCATCCA-----TTAA--CCAC------------ATAAATCTCTATCG-----------GTA-ACACCCTAACCG---------GCCCCAAAAT---------AGACCCCGGCCTGGAC--------------------------------------------CCCAA------CCATT------------TCGTCAGTCT---GGAGG---CAA-----------------------TTTCATCGTGTAAGGCGAAACCGTCATTAGACATCATT-
droPer2 scaffold_1482:4406-4715 + GGTGCCCGCCCTGCAGACCATCTCCGTCCTGGCCCTGGCCAAAGTTGAAGGTAAGTCC------ACC---------------CCTAC------------------------------------------------------------------------------------AAAAAAAAAAAAAAAAAGAA----AAAGAAATAA-----------------------------------CCAAAAAGAAAACAAA--AAAGAAAATATTATTATTGTTATTGATTTA---CTAACA------------CAGCGACCTTGAACC------TGGGGGTTCATTCATCCA-----TTAA--CCAC------------ATAAATCTCTATCG-----------GTA-ACACCCTACCCG---------GCCCCAAAAT---------AGACCCCGGCCTGGAC--------------------------------------------CCCAA------CCATT------------TCGTCAGTCT---GGAGG---CAA-----------------------TTTCATCGTGTAAGGCGAAACCGTCATTAGACATCATT-
droWil2 scf2_1100000004762:3616629-3616966 + dwi_2023 GGTTCCCGCACTCCAAACGATATCCGTGTTGGCCCTGGCTAAAGTTGAAGGTGAGTAC------TGCTGTC-------AAA-AACGA---------CAAGTTCCTACTACTTATAGACATTCGACCTTGAACTCATCTAAACTTTCCAACTCCACCCATCACCCAACATCAAAACCAA------------------AAAAAAAAA-----------------------------------AGAAAAAAAAAACAGATGGAGGA------------------------------------------------------------------------------------------------------GAATCTCATCATAAATTACCAACACTTAAT---AGACTCACAAGCCAAGAAAATTTTCAAGTCTCAAAC--CACAAGCGAGA---------------------CCTC--CC------------------------CTTTCCCCT------TCATC------------T-TTC-GTCT---GAAAG---CAA-----------------------TTTCATCGTGTAAGACGAAACCGTCATTAGACATCATT-
droVir3 scaffold_13049:22033069-22033378 - dvi_20912 GGTGCCCGCACTACAAACGATATCCGTTTTGGCACTGGCTAAAGTTGAAGGTAAGTACGCAATCCAT----TG--------GCTTATTAATAATAACAAG------CGGCATAC---------------------------------------------------------AGA--------------------------------TACAGGAAGTGAGAAAGAGAGACCGAT------------------------AGA------------------------------GCTGCC-----------------AACATTGAACTTTAGCTTGGG--------------------ACC--CCACTTGAGGCATATTATAAATAACCAGCACTTAAT---AGATACACAAACTAACCG---------AGCCCAAAGGCCTC-----TGTCTCCGGCTTGAGC--------------------------------------------CG-----------------------------------------------CAGTCTCAGCCGCAGCAGCCGCCGGTGCTCGTCATGTAAGACGAAACCGTCATTAGACATCATTT
droMoj3 scaffold_6680:16603429-16603763 - GGTGCCCGCACTTCAAACCATATCCGTGCTGGCTCTGGCCAAAGTTGAAGGTAAGTGCGTCATCCAT----TG--------GCTTATTATTAATCTCATA----------AGAC---------------------------------------------------------AAA--------------------------------TAGCGCGAGCAAGAGCGAGACAGCTATCGAGTTACCGGAA-GGCGACGAG--TAGG----------------------------------G------------GAACGACATTGAACTTTAACCTG------------------CG-TAGT--CCACTTGAGGCATATTATAAATTACCAGCACTTAATAGTAGATACACAAACTAACTA--------AGCCCCAAAGGC---AAT-GCGGTCCCCGCTTTAAC--------------------------------------------CACAG------CAACA------------GCGCCAGCCG---TCATT---CAG----------------------TGCTCATCATGTAAGACGAAACCGTCATTAGACATCATTT
droGri2 scaffold_15110:21524505-21524829 + GGTGCCCGCACTGCAAACGATATCCGTTTTGGCGCTGGCCAAAGTTGAAGGTAAGTTCCCAATCCAG----TT--------GCTGATTAACATAAA-----------------C---------------------------------------------------------AAA-----------TGAGCGTATGAGAGAACTATCTACAGGAAGTG-------------------------------AGAGCGAG--AT----------AG------------------------A------------GTGCGACTTTGAACTTTAACTTGG--------G------------AAC--CCACTTGGGGCACATTATAAATTACAAGCACTTAATTCTAGATACACAAACTA-CCG---------GTCCCAAACGCCTCAGTGGCGGCCTACGTCTCAGCCACACTTT--------------------------------------CAG------CCACA------------GCCGCAGCCG--CA--GT---CAG----------------------TTTTCGTCATGTAAGACGAAACCGTCATTAGACATCATTT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droAna3
GGTGCCCGCCCTTCAGACCATCTCCGTACTGGCCCTCGCCAAAGTTGAAGGTAAGTCA------TAAGCGA-------ATT-CATTC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGGAATATTATCGATTAA--GCCTCC-------------AGACGACCTTGAACT-------GCTCCAGCATTAATCTC--TGCGGAT--CCCC------------ATCAATTTCTATC------------------------------------------------------------------------CACACATTCGGC--CC-A--A--AAGAAA------AAAACACAACCCAA------CCATG------------GTTGTGGTCT---G--AGCCACAA-----------------------TTTCATCGCACAAGACGTAACCGTCATTAGACGTCATT-SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAA------AAAACACAACCCAA------CCA....................................................................................................2022.505050000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA------AAAACACAACCCAA------CCA....................................................................................................1921.503030000
...............GACCATCTCCGTACTGGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001010000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAA------AAAACACAACCCAA------CCATT------------......................................................................................2211.001001000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A------AAAACACAACCCAA------CCA....................................................................................................1821.002020000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAA------AAAACACAACCCAA------CC.....................................................................................................1920.501010000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A------AAAACACAACCCAA------CCACC------------......................................................................................2090.111010000
droBip1
GGTGCCAGCCCTTCAGACCATCTCCGTACTCGCCCTGGCTAAAGTTGAAGGTAAGTCA------TACACCA-------ATC-CATCC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGGAATATTATCGATTAA---GCATCC------------AGACGACCTTGAACT-------GCTGAAGCATTAATCTC--TGTGGATCGCCAC------------ATCAATTACTCTC------------------------------------------------------------------------CACACATTCTAC--CC-A--AAAAAGAAAAAAACAAAAACCCAACCCAA------CCATC------------GTTGTGGTTT---G--AG---CAA-----------------------TTTCATCGT---------AACCGTCATTAGACGTCATT-SizeHit CountTotal NormTotal
No Reads
droKik1
GGTGCCAGCCCTCCAGACCATCTCTGTGCTGGCCCTGGCTAAAGTTGAAGGTAAGTTT-----CGATTGAA-------TTT-CAGGA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T--AATATTATCGATTA--AGCCACCAACTCGTGT----GTGCGACCTTGAACC-------CTCAAAACATTAATCTCTCCCTGGAT--TCAC------------ATAAATTTCTAT-------------------------------------------------------------------------CACACACAAAAC--AC-ACAAGAA-----------AGA-----------------ACATCTTAAGTAGGG--CCTGCGGTTG--GG--AG---CAA-----------------------TTTCATCGCGTAAGACGAAACCGTCATTAGACATCATT-SizeHit CountTotal NormTotal
No Reads
droFic1
GGTCCCCGCCCTCCAAACAATCTCCGTGCTGGCTCTCGCAAAAGTTGAAGGTAAGTTG------CGCCGAA-------ATC-GAGGC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGATTATTATCGATTAT---CCACCA------------GTGCGACCTTGATCC-------GCTGGCGCATTAATCTC--CCAGAGT--CCAC------------ATCAAATTCCATCG-----------------------------------------------------------------------CACACACTCCGC--CC-A-----------------ATAACTTAACTCAG------CCATC------------GCTGCGGTTT--GG--GG---CAA-----------------------TTTCAACGCGTAAGACGAAACCGTCATTAGACATCATT-SizeHit CountTotal NormTotal
No Reads
droEle1
GGTTCCCGCCCTCCAGACCATCTCCGTGCTGGCCCTGGCCAAAGTTGAAGGTAAGTTT------GGCTGTG-------ATC-CGGGC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGGATTATTATCGATTAG---CCACCA------------GTGCGACCTTGATCC-------GGTGGCGCATTAATCCA--TCTGAGT--CCAC------------ATCAATTTCTAT-------------------------------------------------------------------------CACACACTCCGC--CC-A-----------------TAGACTTAACTCCA------CCATA------------GCTGCGGTTT--TG--GG---CTA-----------------------TTTCAACGCGTAAGGCGAAACCGTCATTAGACATCATT-SizeHit CountTotal NormTotal
No Reads
droRho1
GGTTCCCGCCCTCCAGACCATCTCCGTGCTGGCCCTGGCCAAAGTTGAAGGTAAGTCG------GGTTGGG-------ATC-CAGGC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGATTATTATCGATTAG---CCACCA------------ATGCGACCTTGATCC-------GGTGGCGCATTAATCTC--CCTGAGT--CCAC------------ATCAATTTCTAT-------------------------------------------------------------------------CACACACTCCGC--CC-A-----------------AAGACTTAACTCCA------CCGGC------------GCTGCGGTTT--CG--GG---CAA-----------------------TTTCAACGCGTAAGACGAAACCGTCATTAGACATCATT-SizeHit CountTotal NormTotal
No Reads
droBia1
GGTGCCCGCCCTCCAGACCATCTCCGTGCTGGCCCTGGCCAAAGTTGAAGGTAAGTTG------GCTTGAG-------ATC-CGGCC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGATTATTATCGATTAG---CCACCA------------ATGCGACCTTGATCC-------GCTGCCGCATTAATCTC--CCACCGT--CCAC------------ATCAATTTCTAT-------------------------------------------------------------------------CACACACTCCTC--CC-C--A--------------AAAACCCAACTCAG------CCAAC---------GCTGCTGCGGTTT--TG--GG---CAA-----------------------TTTGAACGCGTAAGACGAAACCGTCATTAGACATCATT-SizeHit CountTotal NormTotal
No Reads
droTak1
GGTGCCCGCCCTCCAGACCATCTCCGTGCTGGCCCTGGCCAAAGTTGAAGGTAAGTTG------GATTGAA-------ATC-CAGGC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGATTATTATCGATTAG---CCACCA------------ATGCGACCTTGATCC-------GGCGACGCATTAATCTC--CCACAGT--CCAC------------ATCAATTTCTAT-------------------------------------------------------------------------CACACACTCCGC--CC-A-----------------A-AACTTAACTCAAACCCAACCATC------------GCTGCGGTTT--CT--GG---CAA-----------------------TTTCAACGCGTAAGACGAAGCCGTCATTAGACATCATT-SizeHit CountTotal NormTotal
No Reads
droEug1
GGTGCCTGCCCTTCAAACCATCTCTGTACTGGCCCTGGCTAAAGTTGAAGGTAAGTTG------GATTGAATTTCTAGATC-TGGTC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGATTATTATCGATTAT----------------------AGCGACCTTGAT-------------------TGATCTC--TCTC----------------------------TCTCTCG-----------G--------------------------------------------------AGTTCCAATCACACATTCAACGCCCCCCGAAAA-----------AGAAGTTAACTCTA------ACATT------------GCTGCGGTTTTTTG--GG---CAA-----------------------TTTCAAAGCGTTAGACGAAACCGTCATTAGACATCATTTSizeHit CountTotal NormTotal
No Reads
dm3
GGTGCCCGCCCTTCAGACCATCTCCGTTCTGGCCCTGGCTAAAGTTGAAGGTAAGTTC------TGTGGAA-------ATC-CCGGC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGATTATTATCGATTATCAACCACCA------------ATGCGACCTTGATCC-------GGTGGCTCATTAATCTC--CTCGAAT--CCAC------------ATCAATTTCTAT-------------------------------------------------------------------------CACGCACTCCGC--CC-A-----------------A-AACTTTACTCAG------CCATC------------GTTGCGGTTT---G--GG---CAA-----------------------TTTCAACGCGTTAGACGAAACCGTCATTAGACATCATT-SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.........................GTTCTGGCCCTGGCTAAAGTTGAAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................TCTGGCCCTGGCTAAAGTTGAAGGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........CTTCAGACCATCTCCGTTCTGGCCCT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................TGGCTAAAGTTGAAGGTAAGTTC------TGT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
..................CATCTCCGTTCTGGCCCTGGCTAAAGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................GCCCTGGCTAAAGTTGAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACTCAG------CCATC------------GTTGCGGTTT---G--GG---.................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
..............AGACCATCTCCGTTCTGGCCCTGG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T---G--GG---CAA-----------------------TTTCAACGCGTTAG.........................2111.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................TGGCTAAAGTTGAAGGTAAGTTC------TG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................TCGATTATCAACCACCA------------ATGCGACCT............................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TT---G--GG---CAA-----------------------TTTCAACGCGTTAGAC.......................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
............................CTGGCCCTGGCTAAAGTTGAAGGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................TAAAGTTGAAGGTAAGTTC------TGTGGAA-------A...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
...........................TCTGGCCCTGGCTAAAGTTGAAGGTG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................AAGGTAAGTTC------TGTGGAA-------ATC-CC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................TC--CTCGAAT--CCAC------------ATCAATTTCTAT-------------------------------------------------------------------------CAC...........................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................GTGGAA-------ATC-CCGGC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGATC.......................................................................................................................................................................................................................................................................................................................................................19200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000
droSim2
GGTGCCCGCCCTTCAGACCATCTCCGTTCTGGCCCTGGCTAAAGTTGAAGGTAAGTTC------TGTGGAA-------ATC-CCGGC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGATTATTATCGATTATCAACCACCA------------ATGCGACCTTGATCC-------GGTGGCTCATTAATCTC--CCCGAAT--CCAC------------ATCAATTTCTAT-------------------------------------------------------------------------CACACACTCCGC--CC-A-----------------A-AACTTTACTCAG------CCATC------------GCTGCGGTTA---G--GG---CAA-----------------------TTTCAACGCGTAAGACGAAACCGTCATTAGACATCATT-SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
...............................................................................................................................................................................................................................................................................................TCAACCACCA------------ATGCGA...............................................................................................................................................................................................................................................................................................................1640.25100000010000000000
droSec2
GGTGCCCGCCCTTCAGACCATCTCCGTTCTGGCCCTGGCTAAAGTTGAAGGTAAGTTC------TGTTGAA-------ATC-CCGGC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGATTATTATCGATTATCAACCACCA------------ATGCGACCTTGATCC-------GGTGGCTCATTAATCTC--CCCGAAT--CCAC------------ATCAATTTCTAT-------------------------------------------------------------------------CACACACTCCGC--CC-A-----------------A-AACTTTACTCAG------CCATC------------GTTGCGGTTT---G--GG---CAA-----------------------TTTCAACGCGTAAGACGAAACCGTCATTAGACATCATT-SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
No Reads
droYak3
GGTGCCCGCCCTGCAGACCATCTCCGTTCTGGCGCTGGCCAAAGTTGAAGGTAAGTTC------TGCTGCA-------ATCCCCGCC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGATTATTATCGATTATCAGCCAGCAAAT---ATACCAATGCGACCTTGATCC-------AGTGGCTCATTAATCTG--CCCGAGT--CCAC------------ATCAATTTCCAT-------------------------------------------------------------------------CACACACTCCGC--CC-A-----------------A-AACTTTACTCAG------CCATC---------G--GCTGCGGTTT--TG--GG---CAA-----------------------TTTCAGCGCGTAAGACGAAACCGTCATTAGACATCATT-SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
..................................CTGGCCAAAGTTGAAGGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00101000000000
droEre2
GGTGCCCGCCCTTCAGACCATCTCCGTTCTGGCCCTGGCTAAAGTTGAAGGTAAGTGC------TATCGAA-------ATC-CCGGC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGATTATTATCGATTATCAGCCACCA------------AAGCGACCTTGATCC-------GGTGGCTCATTAATCTA--CCCGAAT--CCAC------------ATCAATTTCTAT-------------------------------------------------------------------------CACACACTCCAC--CC-C-----------------AAAACTTTACTCAG------CCATC------------GCTGCGGTTT---C--GG---CAA-----------------------TTTCAACGCGTAAGTCGAAACCGTCATTAGACATCATT-SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.........................GTTCTGGCCCTGGCTAAAGTTGAAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.0020000002
dp5
GGTGCCCGCCCTGCAGACCATCTCCGTCCTGGCCCTGGCCAAAGTTGAAGGTAAGTCC------ACC---------------CCCAC-----------------------------------------------------------------------------AAAATACAAAAAAA------------------AAGAAATAA-----------------------------------CCGAAAAGAAAACAAA-AAAAGAAAATATTATTATTGTTATTGATTTA---CTAACA------------CAGCGACCTTGAACC------TGGGGGTTCATTCATCCA-----TTAA--CCAC------------ATAAATCTCTATCG-----------GTA-ACACCCTAACCG---------GCCCCAAAAT---------AGACCCCGGCCTGGAC--------------------------------------------CCCAA------CCATT------------TCGTCAGTCT---GGAGG---CAA-----------------------TTTCATCGTGTAAGGCGAAACCGTCATTAGACATCATT-SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
No Reads
droPer2
GGTGCCCGCCCTGCAGACCATCTCCGTCCTGGCCCTGGCCAAAGTTGAAGGTAAGTCC------ACC---------------CCTAC------------------------------------------------------------------------------------AAAAAAAAAAAAAAAAAGAA----AAAGAAATAA-----------------------------------CCAAAAAGAAAACAAA--AAAGAAAATATTATTATTGTTATTGATTTA---CTAACA------------CAGCGACCTTGAACC------TGGGGGTTCATTCATCCA-----TTAA--CCAC------------ATAAATCTCTATCG-----------GTA-ACACCCTACCCG---------GCCCCAAAAT---------AGACCCCGGCCTGGAC--------------------------------------------CCCAA------CCATT------------TCGTCAGTCT---GGAGG---CAA-----------------------TTTCATCGTGTAAGGCGAAACCGTCATTAGACATCATT-SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
..............................................................................................................................................................................................................................................................................................TA---CTAACA------------CAGCGACCTTG..........................................................................................................................................................................................................................................................................................................1911.001100000
droWil2
GGTTCCCGCACTCCAAACGATATCCGTGTTGGCCCTGGCTAAAGTTGAAGGTGAGTAC------TGCTGTC-------AAA-AACGA---------CAAGTTCCTACTACTTATAGACATTCGACCTTGAACTCATCTAAACTTTCCAACTCCACCCATCACCCAACATCAAAACCAA------------------AAAAAAAAA-----------------------------------AGAAAAAAAAAACAGATGGAGGA------------------------------------------------------------------------------------------------------GAATCTCATCATAAATTACCAACACTTAAT---AGACTCACAAGCCAAGAAAATTTTCAAGTCTCAAAC--CACAAGCGAGA---------------------CCTC--CC------------------------CTTTCCCCT------TCATC------------T-TTC-GTCT---GAAAG---CAA-----------------------TTTCATCGTGTAAGACGAAACCGTCATTAGACATCATT-SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.................................................................................................................................................................................A------------------AAAAAAAAA-----------------------------------AGAAAAAAAA................................................................................................................................................................................................................................................................................................................................................................................20200.05100010
droVir3
GGTGCCCGCACTACAAACGATATCCGTTTTGGCACTGGCTAAAGTTGAAGGTAAGTACGCAATCCAT----TG--------GCTTATTAATAATAACAAG------CGGCATAC---------------------------------------------------------AGA--------------------------------TACAGGAAGTGAGAAAGAGAGACCGAT------------------------AGA------------------------------GCTGCC-----------------AACATTGAACTTTAGCTTGGG--------------------ACC--CCACTTGAGGCATATTATAAATAACCAGCACTTAAT---AGATACACAAACTAACCG---------AGCCCAAAGGCCTC-----TGTCTCCGGCTTGAGC--------------------------------------------CG-----------------------------------------------CAGTCTCAGCCGCAGCAGCCGCCGGTGCTCGTCATGTAAGACGAAACCGTCATTAGACATCATTTSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
..................GATATCCGTTTTGGCACTGGCTAAA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000000000000000000000000000000000000100000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGACGAAACCGTCATTAGACA......2111.001000000000000000000000000000010000000000000000000000000000000000
......................................................................................................................................................................................................................GTGAGAAAGAGAGACCGC..................................................................................................................................................................................................................................................................................................................................................................................................18110.091000000100000000000000000000000000000000000000000000000000000000
droMoj3
GGTGCCCGCACTTCAAACCATATCCGTGCTGGCTCTGGCCAAAGTTGAAGGTAAGTGCGTCATCCAT----TG--------GCTTATTATTAATCTCATA----------AGAC---------------------------------------------------------AAA--------------------------------TAGCGCGAGCAAGAGCGAGACAGCTATCGAGTTACCGGAA-GGCGACGAG--TAGG----------------------------------G------------GAACGACATTGAACTTTAACCTG------------------CG-TAGT--CCACTTGAGGCATATTATAAATTACCAGCACTTAATAGTAGATACACAAACTAACTA--------AGCCCCAAAGGC---AAT-GCGGTCCCCGCTTTAAC--------------------------------------------CACAG------CAACA------------GCGCCAGCCG---TCATT---CAG----------------------TGCTCATCATGTAAGACGAAACCGTCATTAGACATCATTTSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads
droGri2
GGTGCCCGCACTGCAAACGATATCCGTTTTGGCGCTGGCCAAAGTTGAAGGTAAGTTCCCAATCCAG----TT--------GCTGATTAACATAAA-----------------C---------------------------------------------------------AAA-----------TGAGCGTATGAGAGAACTATCTACAGGAAGTG-------------------------------AGAGCGAG--AT----------AG------------------------A------------GTGCGACTTTGAACTTTAACTTGG--------G------------AAC--CCACTTGGGGCACATTATAAATTACAAGCACTTAATTCTAGATACACAAACTA-CCG---------GTCCCAAACGCCTCAGTGGCGGCCTACGTCTCAGCCACACTTT--------------------------------------CAG------CCACA------------GCCGCAGCCG--CA--GT---CAG----------------------TTTTCGTCATGTAAGACGAAACCGTCATTAGACATCATTTSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/18/2015 at 04:36 AM