ID:

dan_2352

 Coordinate:

scaffold_13337:1950346-1950496 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

Flybase annnotation

CDS [Dana\GF25032-cds]; exon [dana_GLEANR_9712:3]; intron [Dana\GF25032-in]

No Repeatable elements found

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
GACTCAATTAGAGTGTCCCCTGTACCTTCGGAACAGAAACTAAAAAAAAAATGATAATCGAATGAAAAACTAAAAAACCAAAATCAATCAAAAGAAAATGAAATGAAAAATAGATGATGATGATCAATGATCGAACCACTGATCTACGAGATCAGAGCTTATCCAACCACGAGATACACTAATCCCTCTTCCCAATTCTAGGCAAGTCCACGGATTCGAAAATTCCCTACCTTTCGCAGCCTCTGTATGAC
**************************************************.......(((.......................(((.(((........)))..)))........((((.((.....)).)))).....(((((((...)))))))..............)))(((......))).................************************************************** 		Read size # Mismatch Hit Count Total Norm Total M044
female body
 V039
embryo
 V105
male body		 M058
embryo
.............................................................................................................................................................................................................................ATTCCCTACCTTTCGCAGCCT......... 21 0 1 1.00 1 1 0 0 0
......................................................................................................................................................................................................CGGGCAAGTCCACGGATTC.................................. 19 2 1 1.00 1 1 0 0 0
..........................................................................................AAAGAAAATGAAATGTGAAACAGA......................................................................................................................................... 24 3 5 0.20 1 0 0 1 0
............................................................................................................................................................................GACACATTAATCCCTCTT............................................................. 18 2 5 0.20 1 0 1 0 0
..............................................................TGAAACACTCAAAAACCAAA......................................................................................................................................................................... 20 2 12 0.08 1 0 0 0 1
................................................................AAAAACTAGAAAACCAAAA........................................................................................................................................................................ 19 1 15 0.07 1 0 1 0 0
................................................................AAAAACTAAAAAACCCAAA........................................................................................................................................................................ 19 1 18 0.06 1 0 0 0 1
................................................................ATAAACTAAAAAACCACAACCA..................................................................................................................................................................... 22 3 20 0.05 1 0 0 0 1

Anti-sense strand reads

CTGAGTTAATCTCACAGGGGACATGGAAGCCTTGTCTTTGATTTTTTTTTTACTATTAGCTTACTTTTTGATTTTTTGGTTTTAGTTAGTTTTCTTTTACTTTACTTTTTATCTACTACTACTAGTTACTAGCTTGGTGACTAGATGCTCTAGTCTCGAATAGGTTGGTGCTCTATGTGATTAGGGAGAAGGGTTAAGATCCGTTCAGGTGCCTAAGCTTTTAAGGGATGGAAAGCGTCGGAGACATACTG
**************************************************.......(((.......................(((.(((........)))..)))........((((.((.....)).)))).....(((((((...)))))))..............)))(((......))).................************************************************** 		Read size # Mismatch Hit Count Total Norm Total M044
female body
 V105
male body		 V106
head
 V055
head
.................................................................................................................................TAGCTTGGCGACTAGGGGCTC..................................................................................................... 21 3 1 1.00 1 1 0 0 0
...................................................................................................................................GCTTGGCGACTAGGGGCTC..................................................................................................... 19 3 16 0.69 11 7 1 3 0
...................................................................................................................................GCTTGGTGACTAGGGGCGC..................................................................................................... 19 3 14 0.50 7 3 2 1 1
..................................................................................................................................AGATTGGTGACTCGATGC....................................................................................................... 18 2 2 0.50 1 0 1 0 0
................................................................................................................................CTAGCTTGGCGACTAGGGGC....................................................................................................... 20 3 2 0.50 1 0 1 0 0
.........TCTTACAGGGGACAGCGAAG.............................................................................................................................................................................................................................. 20 3 2 0.50 1 0 0 0 1
....................................................................................................................................CTTGGTGACTAGGGGCTC..................................................................................................... 18 2 3 0.33 1 0 0 1 0
..................................................................................................................................AGCTTGGCGACTAGGGGCTC..................................................................................................... 20 3 4 0.25 1 1 0 0 0
..........................................................................................................................TAGTTATGAGATTGGTGACT............................................................................................................. 20 3 5 0.20 1 0 0 1 0
................................................................................................................................CTAGCTTGGCGACTAGGGG........................................................................................................ 19 3 20 0.15 3 2 1 0 0
.................................................................................................................................TAGCTTGGCGACTAGGGGC....................................................................................................... 19 3 17 0.12 2 2 0 0 0
............................................................................................................................................................................................................TCCGGTACCTAAGCTTTT............................. 18 2 14 0.07 1 1 0 0 0
...............................................................................................................................CCTAGCTTGGCGACTAG........................................................................................................... 17 2 18 0.06 1 0 0 0 1
.........................................................................TTTCGGTCTTAGTTAGTTT............................................................................................................................................................... 19 2 18 0.06 1 1 0 0 0
.........................................................................................................................................TGATGAGATGCTCTAGTTT............................................................................................... 19 3 20 0.05 1 0 0 0 1
..........................................................................................................................TATTTACTAGCTTGGTGAGA............................................................................................................. 20 3 20 0.05 1 0 0 0 1
...................................................................................................................................GCTTGGCGACTAGGTGCGC..................................................................................................... 19 3 20 0.05 1 0 0 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droAna3 scaffold_13337:1950296-1950546 + dan_2352 GACT-------------------------------------CAATTAGAG---TGT-CCC-CTGTACCTTCGGAAC-AG--------A---AA-------CTAAAAAAA-----------------------------------------AAAT-----------------------------------------------------GATA-ATCGAATGAAAAACTAAAAAACCAAAATCAATC----------AAAA----------GAAAATGAAATGAA-----AAAT-------------------------------------------------------------------A--GA---TGA---TGATGATC----------------AA-TG-------A-TCGAACCACTG--------------ATCTACGAGA-------------------------------------TCAGAGCTT---A--T-CCA--ACCACGAGATACACTAATCCCTCTTCCCA-ATTCTAGGCAAGTCCACGGATTCGAAAATTCCC---TACCTTTCGCAGCCTCTGTATGAC
droBip1 scf7180000396569:1993481-1993717 + GACT-------------------------------------CAATTTG-----TGT-CCC-CTGTACCTTTGGAAC-AG--------A---AA------------------------------------------------AA---AAACGAAT----------------------G---------------------------AATCGATAACCAAATGAA-------------------------A--AAAAAAAACGAAATCAATC--AAA-----AG-----------------------------------------------------A-----------------AATGTTTAAAGC---------TGATGATC----------------A-CTG-------A--TGAACCACTG--------------ATCTACGCGA-------------------------------------TCAGAGCTA---A--T-CCG--TCCACGAGATGCACTAATCCCTCTTCCCA-ATTCTAGGCAAGTCCACGGATTCGAAAATTCCC---TACCTTTCGCAGCCTCTGTATGAC
droKik1 scf7180000302510:1005491-1005717 + G------------------------------------------------------AACCA-----------------AG--------A---TAATCGAA---------------------------------------------AAAT-CCAA-----------------------AAAAAA----------------------AATTTTA-----AATT----------GA---------------A--AAAGAAA-----------------------GCA-----AAGTCAAACCC-----GAA--AAATTCCC----CAAAAACAG---------------AAACCA-ATTGCATAGAGC---------TGATGA-------------------ACTC-------AAGCGAAC----------------------TACTCCG-------------------------------------CCC---CC----CTTC-CTC--AGTATGAGATGCACTAATCCCTCTTCCCA-ATTCTAGGCAAGTCCACGGATTCGAAAATTCCC---TACCTTTCGCAGCCCCTGTACGAC
droFic1 scf7180000454113:578908-579154 + A-------------------------------------------TTTGTCT---GTCCCACTTTTGCCTTCGGAAACAG--------A---CA---GAA-------------------------------------------AGAAAA-CAAA-----------------------AAACAA----------------------AATCAAA-----AAT------T----GAAAGAAA-----------ACC---AAAC-AAGTCAAA-----------TGAA-----AAGT-----C------GAATCGAG-TCCC------------AAACAA-----------------ATTGCATA--GC---------TGATGATC----------------AACTGA------AACTGAAC------------------------------------------------------------------------TCCCCACTTT-CCC--AGTATGAGATGCACTAATCCCTCTTCCCA-ATTCTAGGCAAGTCCACGGATTCGAAAATTCCC---TACCTTTCGCAGCCGTTGTACGAT
droEle1 scf7180000491249:4094068-4094281 + G------------------------------------------------------------------------AAA-TG--------A---CA---GAAC---A-------------------------------------AACCAAA-CCAA-----------------------AAAAAA----------------------A--------------------AGAAAGAAAGAAA-----------ATC---AAAC-AAGTCAAA-----------TGAA---AAAAGT----------------CGAA-TCCCA-----------AAACAA-----------------ATTGCATA--GC---------TGATGATC----------------AACTG-------AACTGAAC------------------------------------------------------------------------TCCTCCC-TC-CCC--ACTATGAGATGCACTAATCCCTCTTCCCA-ATTCTAGGCAAGTCCACGGATTCGAAAATTCCC---TACCTTTCGCAGCCCCTGTACGAC
droRho1 scf7180000776850:456208-456424 + G------------------------------------------------------TCCCACTTTTGCCTTCGGAAA-TG--------A---CA---GAA---------------------------------------------CAAA-CCAA-----------------------AAAAAA----------------------A--------------------A----GAAAGAAA-----------ATC---GAAC-AAGTCAAA-----------TGAA-----AAGT----------------CGAA-TCCC------------AAACAA-----------------ATTGCATA--GC---------TGATGATC----------------AACTG-------AACTGAAC------------------------------------------------------------------------TCC---C--TCCCC--AGTATGAGATGCACTAATCCCTCTTCCCA-ATTCTAGGCAAGTCCACGGATTCGAAAATTCCC---TACCTTTCGCAGCCCCTGTATGAC
droBia1 scf7180000300910:1612538-1612752 - AA-----------------------------------------------------------TTATGCCTTCGGAAACGG--------GCAACA---GAA----------------------------------------------------------------------------------A----------------------A--------------------A----GAA---------ATA-A--AAC---GAAC-AAGTCAAA-----------TGAA-----AAGT-----C------GAATCGAA-TCCC------------AAACAA-----------------ATTGCATA--GC---------TGATGATCGATG------------AACTG-------AACTGAAC----------------ATGA----------------------------------------------------ACC---C-TC-CCC--AGTATGAGATGCACTAATCCCTCTTCCCA-ATTCTAGGCAAGTCCACGGATTCGAAAATTCCC---TACCTTTCGCAGCCCCTGTACGAC
droTak1 scf7180000415095:314665-314864 + T----------------------------------------CAATTTATCTG-TGT-CC-----------CAGAAA-AG--------A---CA---GAA--------------------------------------------------------------------------------------------------------------------------------------TGAAA-----------------AAAC-AAGTCA---------------------------------------GATCGAG-TCCC------------AAACAA-----------------ATTGCATA--GC---------TGATGATC----------------AACTGAAAATGAAACTGAAA------------------------------------------------------------------------ACCCCCCATT-CCC--AGTATGAGATGCACTAATCCCTCTTCCCA-ATTCTAGGCAAGTCCACGGATTCGAAAATTCCC---TACCTTTCGCAGCCCCTGTACGAC
droEug1 scf7180000409007:318488-318693 - ----------------------------------------------------------------TGCCTTCGGAAA-AG--------A---GA------------------------------------------------AAAAAAAA----------------------------------------------------------------------------T----GAAAGAAA----ATC-A--ATC---GAAC-AAGTCAAA-----------TGAA-----AAGT-----C------GAATCGAA-TCCC------------AAACAA-----------------ATTGCATA--GC---------TGATGATC----------------AACTG-------AACTGAAT------------------------------------------------------------------------TCC---C--TCCCC--GTTATGAGATGCACTAATCCCTCTTCCCA-ATTCTAGGCAAGTCCACGGATTCGAAAATTCCC---TACCTTTCGCAGCCTCTGTATGAC
dm3 chr3L:1499288-1499523 - G------------------------------------------------------ACCCAC-TTTGCCTTCGGATA-AG--------A---CA---AAAA-----------------------------------------AAAAAAAACCA----------------------------------------------------------------------------AAGAATGAAAATCAATCAAAAATC---GAAC-AAGTCAAA-----------TGAA---AAAAGTCGAATC------GAATCGAA-TCCC------------AATCAA-----------------ATTGCATA--GC---------TGATGATC----------------AACTG-------AAACGAAT------------------------------------------------------------------------CCC---C--T-CCC--ACTATAAGATGCACTAATCCCTCTTCCCA-ATTCTAGGCAAGTCCACGGATTCGAAAATTCCC---TACCTTTCGCAGCCCCTGTACGAC
droSim2 3l:1416871-1417100 - dsi_19196 G------------------------------------------------------ACCCAC-TTTGCCTTCGGAAA-AG--------A---CA------------------------------------------------AAGAAAA-CCA-----------------------------------------------------------------------------AGAATGAAAATCAATC-A--ATC---GAAC-AAGTCAAA-----------TGAA-----AAGTCGAATCG-AATCGAATCGAA-TCCC------------AATCAA-----------------ATTGCATA--GC---------TGATGATC----------------AACTG-------AAACGAAC------------------------------------------------------------------------CCC---C--T-CCC--ACTATAAGATGCACTAATCCCTCTTCCCA-ATTCTAGGCAAGTCCACGGATTCGAAAATTCCC---TACCTTTCGCAGCCCCTGTACGAC
droSec2 scaffold_2:1533199-1533423 - G------------------------------------------------------ACCCAC-TTTGCCTTCGGAAA-AG--------A---CA------------------------------------------------AAGAAAA-CCA-----------------------------------------------------------------------------AGACTGAAAATCAATC-A--ATC---GAAC-AAGTCAAA-----------TGAA-----AAGTCGAATC------GAATCGAA-TCCC------------AATCAA-----------------ATTGCATA--GC---------TGATGATC----------------AACTG-------AAACGAAC------------------------------------------------------------------------CCC---C--T-CCC--ACTATAAGATGCACTAATCCCTCTTCCCA-ATTCTAGGCAAGTCCACGGATTCGAAAATTCCC---TACCTTTCGCAGCCCCTGTACGAC
droYak3 3L:1456030-1456259 - G------------------------------------------------------ACCCACTTTTGCCTTCGGAAA-AG--------A---CA------------------------------------------------ATGAAAAA----------------------------------------------------------------------------CGAAAGAAAGAAT----ATC-A--ATC---GAAC-AAGTCAAA-----------TCAAATAAAAAGTCAAATC------GAATCGAA-TCCCA-----------AAACAA-----------------ATTGCATA--GC---------TGATGATC----------------AACTG-------AACCGAAA------------------------------------------------------------------------CCC---C--T-CCC--AGTATAAGATGCACTAATCCCTCTTCCCA-ATTCTAGGCAAGTCCACGGATTCGAAAATTCCC---TACCTTTCGCAGCCCCTGTACGAC
droEre2 scaffold_4784:1483403-1483610 - G------------------------------------------------------ACCCACTTTTGCCTTTGGAAA-AG--------A---CA------------------------------------------------AACAAAAA----------------------------------------------------------------------------C----GAAAGAAT----ATC-A--ATC---GAAC-AAGTCAAA-----------T-----------------C------GAATCGAA-TCCC------------AAACAA-----------------ATTGCATA--GC---------TGATGATC----------------AACTG-------AACCGAAA------------------------------------------------------------------------CCC---C--T-CCC--AGTATAAGATGCACTAATCCCTCTTCCCA-ATTCTAGGCAAGTCCACGGATTCGAAAATTCCC---TACCTTTCGCAGCCCCTGTACGAC
dp5 XR_group3a:597701-598015 + dps_2894 AACT----------------------------------------GTTGTTTGCC-ACCGAGTTGTGCCTTTGGAAAAACAAAAAACAA---TAATA------AAAA----------------------------------------------------------CACAAAAAACAAAAAAAAAACAGACAAAAACCCCGAACAGAAT------------C----------AA---------------A--AAAGAAAAGA----------------------------AAACTAAAGCTAAAA---------C-TA-AAACTAAAAA--GAACAA-----------------ATTGCATA--GCAGATGATGT----GA-----TCCATGATGATGAAACTGAAAACTGAACTGAAA-------ATCCCCCCCA-----TACCCCA-------------------------------------TCC---CCC---C--T-CTC--TGTATGAGATGCACTAATCGGTCTGTCCA-ATTCTAGGCAAGTCCACGGATTCGAAAATTCCC---TACCTTTCGCAGCCTCTGTATGAC
droPer2 scaffold_23:627790-628103 + dpe_1201 AACT----------------------------------------GTTGTTTGCC-ACCGAGTTGTGCCTTTGGAAA-ACAAAAAACAA---TAATA------AAAA----------------------------------------------------------CACAAAAAACAAAAAAAAAACAGACAAAAACCCCGAACAGAAT------------C----------AA---------------A--AAAGAAAAGA----------------------------AAACTAAAGCTAAAA---------C-TA-AAACTAAAAA--GAACAA-----------------ATTGCATA--GCAGATGATGT----GA-----TCCATGATGATGAAACTGAAAACTGAACTGAAA-------ATCCCCCCCA-----TACCCCA-------------------------------------TCC---CCC---C--T-CTC--TGTATGAGATGCACTAATCGGTCTGTCCA-ATTCTAGGCAAGTCCACGGATTCGAAAATTCCC---TACCTTTCGCAGCCTCTGTATGAC
droWil2 scf2_1100000004511:2437786-2438041 + CAA------------------------------------------------------------------------A-ACAA------A---AA-------CAAAGAAAG-----------------------------------------AGTCAATTTTGAGAAAAAAAACCCACAAACAAAAAACAAAAAAAC-----------------------------------------------------------------------------------------------------------------------------------------CAA-----------------GATG-ATA--AA---------TGATGATCGATC------------TACTA--------------C---TACTTCTACTACTACT-------CTACTACTACTACTACAAAAAAAAAAAAAAAAAAAAAAAACAAATACTA---A--T-CCTAACGTATGAGTTGGACTAATCTCTATTCCCA-ATTCTAGGCAAGTCAGCGGACACGAAAGTTCCCCCATACCTTTCGCAGCCTCTGTACGAT
droVir3 scaffold_13049:3642241-3642524 - dvi_18193 GTGTCCTCCCCCCTCCCCTCGCTTGGTTG--CGGT--------------------------------------CAC-AG--------C---AT-------TTGGGCCAACTGTGGTCTCGAGCTGCTGTTGCGAGTCGACACAGACCT-CAT-----------------------------------------------------------------------------AAAATCAAAACGAATC--------------------AAA-----------GAAAAAAAAAAGT----------------CGTA-TTCA------------AACCAAATTGCT--TA-AA-CGATTCGCCTAGCGC---TGATCG----GT-----TCGATGA---------------------TGAGC--------------CCATTG----------------------------------------------------T-C---A--T-CATATCATATGAGATACACTAATCTGTTCTCCCA-ATTCTAGGCAAGTCAGCGGACACGAAAATTCCC---TACCTTTCGCAGCCACTGTATGAT
droMoj3 scaffold_6654:406077-406298 + G------------------------------------------------------CTCAAG--TTGCACTTTGAAC-----------------------------------------------------------TCGACACAAA--A-CTTAT---------------------------------------------------------------------------AAA---AAC----ATA-A--ATC---AA-----ATCAAACTAAAA-----AGAA-----AAG---------------------------------------AGAAAAATGCT--TA-AA-CG-ATCGCTTAACCC---TGATC-----GGTT----------------TACTG-------AA-TGAGC--------------CCATTA----------------------------------------------------TC----CAAA-CAT--CGTATGAGATGCACTAATCTGTTTTCCCAAATTCTAGGCAAGTCGGCGGATACGAAAATTCCC---TACCTTTCGCAGCCATTGTACGAT
droGri2 scaffold_15110:7791222-7791499 - TGGT-----------------------GGGACGGTGGACAACAATTTG----GTGT-CCATTGTTGCATTTAAGGT-CG--------A---CA------------------------------------------------CAAATAA-CTC--------------------------------------------------------------------------------ATGAAAATGAATCAAA--ACAAAAAAC-AAATCAAA-----------CTAA---AAAAGT----------------CGTA-TTCA------------AAGCAAATTGCAAATAAAATCG-ATCGCATA--GC---TGATC-----GGT----TTGATGATG----ATG-------------------------TTGGGCCCATT-------TGC-------------------------------------CC----CCC---G--T-CCCATCGTATGAGATGCACTAATCTGTCTTCCCA-ATTCTAGGCAAGTCAGCGGATACGAAAATTCCC---TACCTTTCGCAGCCACTGTATGAT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droAna3
GACT-------------------------------------CAATTAGAG---TGT-CCC-CTGTACCTTCGGAAC-AG--------A---AA-------CTAAAAAAA-----------------------------------------AAAT-----------------------------------------------------GATA-ATCGAATGAAAAACTAAAAAACCAAAATCAATC----------AAAA----------GAAAATGAAATGAA-----AAAT-------------------------------------------------------------------A--GA---TGA---TGATGATC----------------AA-TG-------A-TCGAACCACTG--------------ATCTACGAGA-------------------------------------TCAGAGCTT---A--T-CCA--ACCACGAGATACACTAATCCCTCTTCCCA-ATTCTAGGCAAGTCCACGGATTCGAAAATTCCC---TACCTTTCGCAGCCTCTGTATGACSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCCC---TACCTTTCGCAGCCT.........2111.001100000
droBip1
GACT-------------------------------------CAATTTG-----TGT-CCC-CTGTACCTTTGGAAC-AG--------A---AA------------------------------------------------AA---AAACGAAT----------------------G---------------------------AATCGATAACCAAATGAA-------------------------A--AAAAAAAACGAAATCAATC--AAA-----AG-----------------------------------------------------A-----------------AATGTTTAAAGC---------TGATGATC----------------A-CTG-------A--TGAACCACTG--------------ATCTACGCGA-------------------------------------TCAGAGCTA---A--T-CCG--TCCACGAGATGCACTAATCCCTCTTCCCA-ATTCTAGGCAAGTCCACGGATTCGAAAATTCCC---TACCTTTCGCAGCCTCTGTATGACSizeHit CountTotal NormTotal
No Reads
droKik1
G------------------------------------------------------AACCA-----------------AG--------A---TAATCGAA---------------------------------------------AAAT-CCAA-----------------------AAAAAA----------------------AATTTTA-----AATT----------GA---------------A--AAAGAAA-----------------------GCA-----AAGTCAAACCC-----GAA--AAATTCCC----CAAAAACAG---------------AAACCA-ATTGCATAGAGC---------TGATGA-------------------ACTC-------AAGCGAAC----------------------TACTCCG-------------------------------------CCC---CC----CTTC-CTC--AGTATGAGATGCACTAATCCCTCTTCCCA-ATTCTAGGCAAGTCCACGGATTCGAAAATTCCC---TACCTTTCGCAGCCCCTGTACGACSizeHit CountTotal NormTotal
No Reads
droFic1
A-------------------------------------------TTTGTCT---GTCCCACTTTTGCCTTCGGAAACAG--------A---CA---GAA-------------------------------------------AGAAAA-CAAA-----------------------AAACAA----------------------AATCAAA-----AAT------T----GAAAGAAA-----------ACC---AAAC-AAGTCAAA-----------TGAA-----AAGT-----C------GAATCGAG-TCCC------------AAACAA-----------------ATTGCATA--GC---------TGATGATC----------------AACTGA------AACTGAAC------------------------------------------------------------------------TCCCCACTTT-CCC--AGTATGAGATGCACTAATCCCTCTTCCCA-ATTCTAGGCAAGTCCACGGATTCGAAAATTCCC---TACCTTTCGCAGCCGTTGTACGATSizeHit CountTotal NormTotal
No Reads
droEle1
G------------------------------------------------------------------------AAA-TG--------A---CA---GAAC---A-------------------------------------AACCAAA-CCAA-----------------------AAAAAA----------------------A--------------------AGAAAGAAAGAAA-----------ATC---AAAC-AAGTCAAA-----------TGAA---AAAAGT----------------CGAA-TCCCA-----------AAACAA-----------------ATTGCATA--GC---------TGATGATC----------------AACTG-------AACTGAAC------------------------------------------------------------------------TCCTCCC-TC-CCC--ACTATGAGATGCACTAATCCCTCTTCCCA-ATTCTAGGCAAGTCCACGGATTCGAAAATTCCC---TACCTTTCGCAGCCCCTGTACGACSizeHit CountTotal NormTotal
No Reads
droRho1
G------------------------------------------------------TCCCACTTTTGCCTTCGGAAA-TG--------A---CA---GAA---------------------------------------------CAAA-CCAA-----------------------AAAAAA----------------------A--------------------A----GAAAGAAA-----------ATC---GAAC-AAGTCAAA-----------TGAA-----AAGT----------------CGAA-TCCC------------AAACAA-----------------ATTGCATA--GC---------TGATGATC----------------AACTG-------AACTGAAC------------------------------------------------------------------------TCC---C--TCCCC--AGTATGAGATGCACTAATCCCTCTTCCCA-ATTCTAGGCAAGTCCACGGATTCGAAAATTCCC---TACCTTTCGCAGCCCCTGTATGACSizeHit CountTotal NormTotal
No Reads
droBia1
AA-----------------------------------------------------------TTATGCCTTCGGAAACGG--------GCAACA---GAA----------------------------------------------------------------------------------A----------------------A--------------------A----GAA---------ATA-A--AAC---GAAC-AAGTCAAA-----------TGAA-----AAGT-----C------GAATCGAA-TCCC------------AAACAA-----------------ATTGCATA--GC---------TGATGATCGATG------------AACTG-------AACTGAAC----------------ATGA----------------------------------------------------ACC---C-TC-CCC--AGTATGAGATGCACTAATCCCTCTTCCCA-ATTCTAGGCAAGTCCACGGATTCGAAAATTCCC---TACCTTTCGCAGCCCCTGTACGACSizeHit CountTotal NormTotal
No Reads
droTak1
T----------------------------------------CAATTTATCTG-TGT-CC-----------CAGAAA-AG--------A---CA---GAA--------------------------------------------------------------------------------------------------------------------------------------TGAAA-----------------AAAC-AAGTCA---------------------------------------GATCGAG-TCCC------------AAACAA-----------------ATTGCATA--GC---------TGATGATC----------------AACTGAAAATGAAACTGAAA------------------------------------------------------------------------ACCCCCCATT-CCC--AGTATGAGATGCACTAATCCCTCTTCCCA-ATTCTAGGCAAGTCCACGGATTCGAAAATTCCC---TACCTTTCGCAGCCCCTGTACGACSizeHit CountTotal NormTotal
No Reads
droEug1
----------------------------------------------------------------TGCCTTCGGAAA-AG--------A---GA------------------------------------------------AAAAAAAA----------------------------------------------------------------------------T----GAAAGAAA----ATC-A--ATC---GAAC-AAGTCAAA-----------TGAA-----AAGT-----C------GAATCGAA-TCCC------------AAACAA-----------------ATTGCATA--GC---------TGATGATC----------------AACTG-------AACTGAAT------------------------------------------------------------------------TCC---C--TCCCC--GTTATGAGATGCACTAATCCCTCTTCCCA-ATTCTAGGCAAGTCCACGGATTCGAAAATTCCC---TACCTTTCGCAGCCTCTGTATGACSizeHit CountTotal NormTotal
No Reads
dm3
G------------------------------------------------------ACCCAC-TTTGCCTTCGGATA-AG--------A---CA---AAAA-----------------------------------------AAAAAAAACCA----------------------------------------------------------------------------AAGAATGAAAATCAATCAAAAATC---GAAC-AAGTCAAA-----------TGAA---AAAAGTCGAATC------GAATCGAA-TCCC------------AATCAA-----------------ATTGCATA--GC---------TGATGATC----------------AACTG-------AAACGAAT------------------------------------------------------------------------CCC---C--T-CCC--ACTATAAGATGCACTAATCCCTCTTCCCA-ATTCTAGGCAAGTCCACGGATTCGAAAATTCCC---TACCTTTCGCAGCCCCTGTACGACSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
......................................................................................................................................................................................................................................................................................................................................................................................GATGATC----------------AACTG-------AAACGAA...................................................................................................................................................................................1913.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCACGGATTCGAAAATTCCC---TACC....................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................TA--GC---------TGATGATC----------------AACTG-------AAACGAAT------------------------------------------------------------------------CCC---C--.................................................................................................2912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................TCCC------------AATCAA-----------------ATTGCATA--GC---------TGATGA........................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................A-----------------ATTGCATA--GC---------TGATGATC----------------AACTG-------A.........................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCCA-ATTCTAGGCAAGTCCACGGA........................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGTCCACGGATTCGAAAATTC.............................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTTCCCA-ATTCTAGGCAAGTCCACG..........................................2611.0010000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................AA-----------------ATTGCATA--GC---------TGATGA........................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCGAAAATTCCC---TACCTTTCGCAGC...........2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................AATCAA-----------------ATTGCATA--GC---------TGA...........................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
...................................................................................................................................................................................................................................................................................................................TCGAA-TCCC------------AATCAA-----------------ATTGCATA--GC---------TGA...........................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..................................................................................................................................................AAACCA----------------------------------------------------------------------------AAGAATGAAAAT...................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCTCTTCCCA-ATTCTAGGCAAGTCCACG..........................................2911.0010000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................AC-TTTGCCTTCGGATA-AG--------A---CA---AAAA-----------------------------------------AAA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................TTCGGATA-AG--------A---CA---AAAA-----------------------------------------AAAAAAAACCA----------------------------------------------------------------------------...............................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................T------------------------------------------------------------------------CCC---C--T-CCC--ACTATAAGATGCACTAA.........................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.......................................................................................................................................................................................................................................................................................................................................................................A--GC---------TGATGATC----------------AACTG-------AAACGAAT------------------------------------------------------------------------..........................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................TGCCTTCGGATA-AG--------A---CA---AA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
........................................................CCCAC-TTTGCCTTCGGATA-AG--------A---CA---AAAA-----------------------------------------A.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................TCGAA-TCCC------------AATCAA-----------------ATTGCATA--GC---------T.............................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCACGGATTCGAAAATTCCC---TACCTTTC................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................AA-TCCC------------AATCAA-----------------ATTGCATA--.........................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGGCAAGTCCACGGATTCGAAAAT...............................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...............................................................................................................................................................................................................................................................................................................................................................................................................................AT------------------------------------------------------------------------CCC---C--T-CCC--ACTATAAG..................................................................................1811.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCCA-ATTCTAGGCAAGTCCACGG.........................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTAGGCAAGTCCACGGATTC.....................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................AGTCGAATC------GAATCGAA-TCC.......................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C---C--T-CCC--ACTATAAGATGCACTAAT........................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................ACCCAC-TTTGCCTTCGGATA-AG--------A---CA---AAAA-----------------------------------------A.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTAGGCAAGTCCACGGATTCGAAAATT..............................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................AA-----------------ATTGCATA--GC---------TGATGATC----------------......................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTAGGCAAGTCCACGGATTCGAAAA................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................A--GC---------TGATGATC----------------AACTG-------AAACG.....................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000
.........................................................................ATA-AG--------A---CA---AAAA-----------------------------------------AAAAAA................................................................................................................................................................................................................................................................................................................................................................................................................................................................1840.2510000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................TA-AG--------A---CA---AAAA-----------------------------------------AAAAAAAA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................1960.1710000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
G------------------------------------------------------ACCCAC-TTTGCCTTCGGAAA-AG--------A---CA------------------------------------------------AAGAAAA-CCA-----------------------------------------------------------------------------AGAATGAAAATCAATC-A--ATC---GAAC-AAGTCAAA-----------TGAA-----AAGTCGAATCG-AATCGAATCGAA-TCCC------------AATCAA-----------------ATTGCATA--GC---------TGATGATC----------------AACTG-------AAACGAAC------------------------------------------------------------------------CCC---C--T-CCC--ACTATAAGATGCACTAATCCCTCTTCCCA-ATTCTAGGCAAGTCCACGGATTCGAAAATTCCC---TACCTTTCGCAGCCCCTGTACGACSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.....................................................................TCGGAAA-AG--------A---CA------------------------------------------------AAGAAAA-C.............................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100100000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTAGGCAAGTCCACGGATTCGAAAATT..............................2911.00100000010000000000
.......................................................................................................................................................................................................................................................................................................................................................................A--GC---------TGATGATC----------------AACTG-------AAACGAAC------------------------------------------------------------------------..........................................................................................................2411.00100000000001000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCCACGGATTCGAAAATTCCC---TACC....................2611.00100000001000000000
droSec2
G------------------------------------------------------ACCCAC-TTTGCCTTCGGAAA-AG--------A---CA------------------------------------------------AAGAAAA-CCA-----------------------------------------------------------------------------AGACTGAAAATCAATC-A--ATC---GAAC-AAGTCAAA-----------TGAA-----AAGTCGAATC------GAATCGAA-TCCC------------AATCAA-----------------ATTGCATA--GC---------TGATGATC----------------AACTG-------AAACGAAC------------------------------------------------------------------------CCC---C--T-CCC--ACTATAAGATGCACTAATCCCTCTTCCCA-ATTCTAGGCAAGTCCACGGATTCGAAAATTCCC---TACCTTTCGCAGCCCCTGTACGACSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
......................................................................................................................................................................................................................................................................................................................................................................TA--GC---------TGATGATC----------------AACTG-------AAA.......................................................................................................................................................................................2011.0010010
droYak3
G------------------------------------------------------ACCCACTTTTGCCTTCGGAAA-AG--------A---CA------------------------------------------------ATGAAAAA----------------------------------------------------------------------------CGAAAGAAAGAAT----ATC-A--ATC---GAAC-AAGTCAAA-----------TCAAATAAAAAGTCAAATC------GAATCGAA-TCCCA-----------AAACAA-----------------ATTGCATA--GC---------TGATGATC----------------AACTG-------AACCGAAA------------------------------------------------------------------------CCC---C--T-CCC--AGTATAAGATGCACTAATCCCTCTTCCCA-ATTCTAGGCAAGTCCACGGATTCGAAAATTCCC---TACCTTTCGCAGCCCCTGTACGACSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
No Reads
droEre2
G------------------------------------------------------ACCCACTTTTGCCTTTGGAAA-AG--------A---CA------------------------------------------------AACAAAAA----------------------------------------------------------------------------C----GAAAGAAT----ATC-A--ATC---GAAC-AAGTCAAA-----------T-----------------C------GAATCGAA-TCCC------------AAACAA-----------------ATTGCATA--GC---------TGATGATC----------------AACTG-------AACCGAAA------------------------------------------------------------------------CCC---C--T-CCC--AGTATAAGATGCACTAATCCCTCTTCCCA-ATTCTAGGCAAGTCCACGGATTCGAAAATTCCC---TACCTTTCGCAGCCCCTGTACGACSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
...........................................................................................................................................................................................................................................................C---GAAC-AAGTCAAA-----------T-----------------C------GAATC..............................................................................................................................................................................................................................................................................................2011.0011000000
dp5
AACT----------------------------------------GTTGTTTGCC-ACCGAGTTGTGCCTTTGGAAAAACAAAAAACAA---TAATA------AAAA----------------------------------------------------------CACAAAAAACAAAAAAAAAACAGACAAAAACCCCGAACAGAAT------------C----------AA---------------A--AAAGAAAAGA----------------------------AAACTAAAGCTAAAA---------C-TA-AAACTAAAAA--GAACAA-----------------ATTGCATA--GCAGATGATGT----GA-----TCCATGATGATGAAACTGAAAACTGAACTGAAA-------ATCCCCCCCA-----TACCCCA-------------------------------------TCC---CCC---C--T-CTC--TGTATGAGATGCACTAATCGGTCTGTCCA-ATTCTAGGCAAGTCCACGGATTCGAAAATTCCC---TACCTTTCGCAGCCTCTGTATGACSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
..................................................................................................................................................................................................................................................................................................................................................................................................CATGATGATGAAACTGAAAACTGAAC.......................................................................................................................................................................................2611375.00137511241684160167030784
..........................................................................................................................................................................................................................................................................................................................................................................................A-----TCCATGATGATGAAACTGAAAACTGAAC.......................................................................................................................................................................................291363.00363265214900073630
..........................................................................................................................................................................................................................................................................................................................................................................................A-----TCCATGATGATGAAACTGAAA..............................................................................................................................................................................................22144.0044019150400510
..................................................................................................................................................................................................................................................................................................................................................................................................CATGATGATGAAACTGAAAACTGAACT......................................................................................................................................................................................27133.003318601001421
.................................................................................................................................................................................................................................................................................................................................................................................................CCATGATGATGAAACTGAAAACTGAAC.......................................................................................................................................................................................27128.002805300007130
................................................................................................................................................................................................................................................................................................................................................................................................TCCATGATGATGAAACTGAAAACTGAAC.......................................................................................................................................................................................28114.00140670000001
..................................................................................................................................................................................................................................................................................................................................................................................................CATGATGATGAAACTGAAAACTGAACC......................................................................................................................................................................................27114.001400100000130
...................................................................................................................................................................................................................................................................................................................................................................................................ATGATGATGAAACTGAAAACTGAAC.......................................................................................................................................................................................25114.001401110100100
..................................................................................................................................................................................................................................................................................................................................................................................................CATGATGATGAAACTGAAAACTGAACA......................................................................................................................................................................................2718.0080100100510
..........................................................................................................................................................................................................................................................................................................................................................................GCAGATGATGT----GA-----TCCATGATGATG.......................................................................................................................................................................................................2516.0060110400000
..................................................................................................................................................................................................................................................................................................................................................................................................CATGATGATGAAACTGAAAACTGAA........................................................................................................................................................................................2516.0060110000220
.........................................................................................................................................................................................................................................................................................................................................................................................GA-----TCCATGATGATGAAACTGAAA..............................................................................................................................................................................................2314.0040310000000
..........................................................................................................................................................................................................................................................................................................................................................................GCAGATGATGT----GA-----TCCATGATGA.........................................................................................................................................................................................................2314.0040110200000
..................................................................................................................................................................................................................................................................................................................................................................................................CATGATGATGAAACTGAAA..............................................................................................................................................................................................1913.0030100200000
..................................................................................................................................................................................................................................................................................................................................................................................................CATGATGATGAAACTGAAAACTGAACTG.....................................................................................................................................................................................2813.0030210000000
......................................................................................................................................................................................................................................................................................................................................................................................................ATGATGAAACTGAAAACTGAAC.......................................................................................................................................................................................2212.0020200000000
.................................................................................................................................................................................................................................................................................................................................................................................................CCATGATGATGAAACTGAAA..............................................................................................................................................................................................2012.0020110000000
....................................................................................................................................................................................................................................................................................................................................................................................................TGATGATGAAACTGAAAACTGAAC.......................................................................................................................................................................................2412.0020200000000
....................................................................................................................................................................................................................................................................................................................................................................................T----GA-----TCCATGATGATGAAACTGAAA..............................................................................................................................................................................................2412.0020110000000
.........................................................................................................................................................................................................................................................................................................................................................................................GA-----TCCATGATGATGAAACTGAAAACTG..........................................................................................................................................................................................2711.0010100000000
..................................................................................................................................................................................................................................................................................................................................................................................................CATGATGATGAAACTGAAAACTGAAT.......................................................................................................................................................................................2611.0010000000001
...........................................................................................................................................................................................................................................................................................................................................................................CAGATGATGT----GA-----TCCATGATGATG.......................................................................................................................................................................................................2411.0010100000000
.................................................................................................................................................................................................................................................................................................................................................................................................CCATGATGATGAAACTGAAAACTGAACT......................................................................................................................................................................................2811.0010010000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAATTCCC---TACCTTTCGCAGCCTCC.......2611.0010010000000
.........................................................................................................................................................................................................................................................................................................................................................................................GA-----TCCATGATGATGAAACTGAAAAA............................................................................................................................................................................................2511.0010100000000
................................................................................................................................................................................................................................................................................................................................................................................................TCCATGATGATGAAACTGAAAACTGAACT......................................................................................................................................................................................2911.0010010000000
..........................................................................................................................................................................................................................................................................................................................................................................................A-----TCCATGATGATGAAACTGAAAACTGAAA.......................................................................................................................................................................................2911.0010010000000
..........................................................................................................................................................................................................................................................................................................................................................................GCAGATGATGT----GA-----TCCATGATGAT........................................................................................................................................................................................................2411.0010000100000
.................................................................................................................................................................................................................................................................................................................................................................................................CCATGATGATGAAACTGAAAACTGAA........................................................................................................................................................................................2611.0010000000100
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATGAGATGCACTAATCGGT....................................................................2111.0010100000000
...................................................................................................................................................................................................................................................................................................................................................................................................ATGATGATGAAACTGAAAACTGAACT......................................................................................................................................................................................2611.0010100000000
..........................................................................................................................................................................................................................................................................................................................................................................................A-----TCCATGATGATGAAACTGAAAAC............................................................................................................................................................................................2411.0010010000000
...................................................................................................................................................................................................................................................................................................................................................................................................ATGATGATGAAACTGAAAACTGAACA......................................................................................................................................................................................2611.0010000000010
.........................................................................................................................................................................................................................................................................................................................................................................................GA-----TCCATGATGATGAAACTGAAAACT...........................................................................................................................................................................................2611.0010010000000
................................................................................................................................................................................................................................................................................................................................................................................................TCCATGATGATGAAACTGAAA..............................................................................................................................................................................................2111.0010010000000
......................................................................................................................................................................................................................................................................................................................................................................................................ATGATGAAACTGAAAACTGAACTGA....................................................................................................................................................................................2511.0010000100000
...................................................................................................................................................................................................................................................................................................................................................................................................ATGATGATGAAACTGAAAACTGAACTG.....................................................................................................................................................................................2711.0010100000000
..................................................................................................................................................................................................................................................................................................................................................................................................CATGATGATGAAACTGAAAACTGAACCT.....................................................................................................................................................................................2811.0010000000100
.........................................................................................................................................................................................................................................................................................................................................................................................................ATGAAACTGAAAACTGAAC.......................................................................................................................................................................................1920.5010100000000
............................................................................................................................................................................................................................................................................................................................................................................................................AAACTGAAAACTGAAC.......................................................................................................................................................................................1660.1710000000010
droPer2
AACT----------------------------------------GTTGTTTGCC-ACCGAGTTGTGCCTTTGGAAA-ACAAAAAACAA---TAATA------AAAA----------------------------------------------------------CACAAAAAACAAAAAAAAAACAGACAAAAACCCCGAACAGAAT------------C----------AA---------------A--AAAGAAAAGA----------------------------AAACTAAAGCTAAAA---------C-TA-AAACTAAAAA--GAACAA-----------------ATTGCATA--GCAGATGATGT----GA-----TCCATGATGATGAAACTGAAAACTGAACTGAAA-------ATCCCCCCCA-----TACCCCA-------------------------------------TCC---CCC---C--T-CTC--TGTATGAGATGCACTAATCGGTCTGTCCA-ATTCTAGGCAAGTCCACGGATTCGAAAATTCCC---TACCTTTCGCAGCCTCTGTATGACSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
..........................................................................................................................................................................................................................................................................................................................................................................................A-----TCCATGATGATGAAACTGAAAACTGAAC.......................................................................................................................................................................................291343.0034334120000
..................................................................................................................................................................................................................................................................................................................................................................................................CATGATGATGAAACTGAAAACTGAAC.......................................................................................................................................................................................26193.009371184000
................................................................................................................................................................................................................................................................................................................................................................................................TCCATGATGATGAAACTGAAAACTGAAC.......................................................................................................................................................................................28112.00121200000
..........................................................................................................................................................................................................................................................................................................................................................................................A-----TCCATGATGATGAAACTGAAA..............................................................................................................................................................................................2218.008431000
..................................................................................................................................................................................................................................................................................................................................................................................................CATGATGATGAAACTGAAAACTGAACT......................................................................................................................................................................................2718.008800000
..................................................................................................................................................................................................................................................................................................................................................................................................CATGATGATGAAACTGAAAACTGAACTG.....................................................................................................................................................................................2815.005500000
................................................................................................................................................................................................................................................................................................................................................................................................TCCATGATGATGAAACTGAAAACTGAACT......................................................................................................................................................................................2914.004400000
.................................................................................................................................................................................................................................................................................................................................................................................................CCATGATGATGAAACTGAAAACTGAAC.......................................................................................................................................................................................2714.004400000
...........................................................................................................................................................................................................................................................................................................................................................................................................GAAACTGAAAACTGAACT......................................................................................................................................................................................1813.003300000
......................................................................................................................................................................................................................................................................................................................................................................................................ATGATGAAACTGAAAACT...........................................................................................................................................................................................1812.002200000
.................................................................................................................................................................................................................................................................................................................................................................................................CCATGATGATGAAACTGAAAACTG..........................................................................................................................................................................................2412.002200000
......................................................................................................................................................................................................................................................................................................................................................................................................ATGATGAAACTGAAAACTGAAC.......................................................................................................................................................................................2212.002200000
..........................................................................................................................................................................................................................................................................................................................................................................................A-----TCCATGATGATGAAACTG.................................................................................................................................................................................................1912.002200000
.............................................................................................................................................................................................................................................................................................................................................................................GATGATGT----GA-----TCCATGAT...........................................................................................................................................................................................................1812.002200000
..........................................................................................................................................................................................................................................................................................................................................................................................A-----TCCATGATGATGAAACTGA................................................................................................................................................................................................2011.001001000
.................................................................................................................................................................................................................................................................................................................................................................................................CCATGATGATGAAACTGAAAACT...........................................................................................................................................................................................2311.001100000
.................................................................................................................................................................................................................................................................................................................................................................................................CCATGATGATGAAACTGAAAACTGAACT......................................................................................................................................................................................2811.001100000
..........................................................................................................................................................................................................................................................................................................................................................................................A-----TCCATGATGATGAAACTGAAAACT...........................................................................................................................................................................................2511.001100000
..........................................................................................................................................................................................................................................................................................................................................................................................A-----TCCATGATGATGAAACTGAAAAC............................................................................................................................................................................................2411.001100000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGATGCACTAATCGGTCTGTC...............................................................2211.001100000
..........................................................................................................................................................................................................................................................................................................................................................................................A-----TCCATGATGATGAAACTGAAAACTG..........................................................................................................................................................................................2611.001100000
..................................................................................................................................................................................................................................................................................................................................................................................................CATGATGATGAAACTGAAAACTGAA........................................................................................................................................................................................2511.001010000
..................................................................................................................................................................................................................................................................................................................................................................................................CATGATGATGAAACTGAAAACT...........................................................................................................................................................................................2211.001100000
..........................................................................................................................................................................................................................................................................................................................................................................GCAGATGATGT----GA-----TCCATGATGATGA......................................................................................................................................................................................................2611.001010000
droWil2
CAA------------------------------------------------------------------------A-ACAA------A---AA-------CAAAGAAAG-----------------------------------------AGTCAATTTTGAGAAAAAAAACCCACAAACAAAAAACAAAAAAAC-----------------------------------------------------------------------------------------------------------------------------------------CAA-----------------GATG-ATA--AA---------TGATGATCGATC------------TACTA--------------C---TACTTCTACTACTACT-------CTACTACTACTACTACAAAAAAAAAAAAAAAAAAAAAAAACAAATACTA---A--T-CCTAACGTATGAGTTGGACTAATCTCTATTCCCA-ATTCTAGGCAAGTCAGCGGACACGAAAGTTCCCCCATACCTTTCGCAGCCTCTGTACGATSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCCA-ATTCTAGGCAAGTCAGCGGA........................................2511.00100100
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAAGTCAGCGGACACGAAA.................................2011.00100010
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAAAAAAAAAAAAAAAAAAC...............................................................................................................25200.05101000
droVir3
GTGTCCTCCCCCCTCCCCTCGCTTGGTTG--CGGT--------------------------------------CAC-AG--------C---AT-------TTGGGCCAACTGTGGTCTCGAGCTGCTGTTGCGAGTCGACACAGACCT-CAT-----------------------------------------------------------------------------AAAATCAAAACGAATC--------------------AAA-----------GAAAAAAAAAAGT----------------CGTA-TTCA------------AACCAAATTGCT--TA-AA-CGATTCGCCTAGCGC---TGATCG----GT-----TCGATGA---------------------TGAGC--------------CCATTG----------------------------------------------------T-C---A--T-CATATCATATGAGATACACTAATCTGTTCTCCCA-ATTCTAGGCAAGTCAGCGGACACGAAAATTCCC---TACCTTTCGCAGCCACTGTATGATSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
................................................................................................................................................................................................................................................................................................................................................TTGCT--TA-AA-CGATTCGCCTAG..........................................................................................................................................................................................................................................2112.002000000000000000000000000000000000000000000000000000000000000002
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C---TACCTTTCGCAGCCACTGT.....2011.001000000000000000000000000000000000000000000000000000000000001000
.....................................................................................................................................................................................................................................................................................................................................................................................................GA---------------------TGAGC--------------CCATTG----------------------------------------------------T-C---A--T-CATA...........................................................................................2111.001000000000000000000100000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................T--TA-AA-CGATTCGCCTAGCGC---TGAT................................................................................................................................................................................................................................2411.001000000000000001000000000000000000000000000000000000000000000000
............................................................................................T-------TTGGGCCAACTGTGGTCTCGAGCT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000000000000000000000000000000000000000100000000000000000000000
......................................................................................................................................GTCGACACAGACCT-CAT-----------------------------------------------------------------------------AAA...........................................................................................................................................................................................................................................................................................................................................................................2011.001000100000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................TAGCGC---TGATCG----GT-----TCGATGA---------------------TG.....................................................................................................................................................................................2311.001000000000000000000000000000000000000000000000000000000000000010
..................................T--------------------------------------CAC-AG--------C---AT-------TTGGGCCAACTG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001010000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................ATCG----GT-----TCGATGA---------------------TGAGC--------------CCATTG----------------------------------------------------T-C---....................................................................................................2611.001000100000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................A------------AACCAAATTGCT--TA-AA-CG....................................................................................................................................................................................................................................................1911.001000000000000000000000100000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................A------------AACCAAATTGCT--TA-AA-CGA...................................................................................................................................................................................................................................................2011.001000000000000000100000000000000000000000000000000000000000000000
.......................................................................................................GGCCAACTGTGGTCTCGAGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000100000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................CGATGA---------------------TGAGC--------------CCATTG----------------------------------------------------T-C---A--T-...............................................................................................2111.001000000000000000000000100000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGGACACGAAAATTCCC---TACC....................2211.001001000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................CTAGCGC---TGATCG----GT-----TCGATG.............................................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000010
..................................T--------------------------------------CAC-AG--------C---AT-------TTGGGCCAACTGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001010000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................GACCT-CAT-----------------------------------------------------------------------------AAAATCAAAAC...................................................................................................................................................................................................................................................................................................................................................................1920.501001000000000000000000000000000000000000000000000000000000000000
droMoj3
G------------------------------------------------------CTCAAG--TTGCACTTTGAAC-----------------------------------------------------------TCGACACAAA--A-CTTAT---------------------------------------------------------------------------AAA---AAC----ATA-A--ATC---AA-----ATCAAACTAAAA-----AGAA-----AAG---------------------------------------AGAAAAATGCT--TA-AA-CG-ATCGCTTAACCC---TGATC-----GGTT----------------TACTG-------AA-TGAGC--------------CCATTA----------------------------------------------------TC----CAAA-CAT--CGTATGAGATGCACTAATCTGTTTTCCCAAATTCTAGGCAAGTCGGCGGATACGAAAATTCCC---TACCTTTCGCAGCCATTGTACGATSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.........................................................................................................................................................................................................................................................................................................................................................................................GGTT----------------TACTG-------AA-TGAGC--------------CC..................................................................................................................................................................1811.001100000
droGri2
TGGT-----------------------GGGACGGTGGACAACAATTTG----GTGT-CCATTGTTGCATTTAAGGT-CG--------A---CA------------------------------------------------CAAATAA-CTC--------------------------------------------------------------------------------ATGAAAATGAATCAAA--ACAAAAAAC-AAATCAAA-----------CTAA---AAAAGT----------------CGTA-TTCA------------AAGCAAATTGCAAATAAAATCG-ATCGCATA--GC---TGATC-----GGT----TTGATGATG----ATG-------------------------TTGGGCCCATT-------TGC-------------------------------------CC----CCC---G--T-CCCATCGTATGAGATGCACTAATCTGTCTTCCCA-ATTCTAGGCAAGTCAGCGGATACGAAAATTCCC---TACCTTTCGCAGCCACTGTATGATSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/18/2015 at 04:22 AM