ID:

dan_232

 Coordinate:

scaffold_13337:13664374-13664436 -

 Confidence:

candidate

 Class:

Mirtron

 Genomic Locale:

intron

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-18.2

Flybase annnotation

intron [Dana\GF23946-in]; CDS [Dana\GF23946-cds]; CDS [Dana\GF23946-cds]

No Repeatable elements found

Sense Strand Reads

GTACCGAGAAGCAGCTGGAGAGCGACATCGCCATTGTGCGCGTGGAGCAGGTGAGCCGAAGTTGTTTGGAGCTGAGTTTATGAGCTTTGAGCTGAATCTCCTTTGGTTCTTAGGTATCGCCCTTCCCCTTCGACCTGGTCAAGGAGCAGGCCAACCTCTACAA

**************************************************..(((((((((..((((((((((.........))))))))))........)))))))))....************************************************** 		Read size # Mismatch Hit Count Total Norm Total V105

male body		 V106

head

 M044

female body

 V055

head

 M058

embryo

 V039

embryo
..................................................GTGAGCCGAAGTTGTTTGGAGCT.......................................................................................... 23 0 1 8347.00 8347 4846 3007 356 125 7 6
..................................................GTGAGCCGAAGTTGTTTGGAG............................................................................................ 21 0 1 2658.00 2658 1309 1078 115 152 1 3
..................................................GTGAGCCGAAGTTGTTTGGAGC........................................................................................... 22 0 1 2295.00 2295 1216 769 207 93 8 2
..................................................GTGAGCCGAAGTTGTTTGG.............................................................................................. 19 0 1 2230.00 2230 864 1107 156 103 0 0
..................................................GTGAGCCGAAGTTGTTTGGA............................................................................................. 20 0 1 1771.00 1771 993 609 103 65 1 0
..................................................GTGAGCCGAAGTTGTTTGGAGCTT......................................................................................... 24 1 1 308.00 308 191 93 17 6 1 0
..................................................GTGAGCCGAAGTTGTTTGGAGT........................................................................................... 22 1 1 124.00 124 61 44 12 7 0 0
..................................................GTGAGCCGAAGTTGTTTGGATCT.......................................................................................... 23 1 1 102.00 102 60 42 0 0 0 0
..................................................GTTAGCCGAAGTTGTTTGGAGCT.......................................................................................... 23 1 1 82.00 82 12 70 0 0 0 0
..................................................GTGAGCCGAAGTTGTTTGGAGAT.......................................................................................... 23 1 1 62.00 62 32 30 0 0 0 0
..................................................GTGATCCGAAGTTGTTTGGAGCT.......................................................................................... 23 1 1 62.00 62 23 39 0 0 0 0
..................................................GTGAGCCGAAGTTGTTTGGAGCTTT........................................................................................ 25 2 1 54.00 54 27 21 2 4 0 0
..................................................GTGAGCCGAAGTTGTTTG............................................................................................... 18 0 1 50.00 50 7 21 15 7 0 0
..................................................GTGAGCCGAAGTTGTTTGGAGA........................................................................................... 22 1 1 46.00 46 19 22 0 4 1 0
..................................................GTGAGCCGAAGTTGTTTGGAACT.......................................................................................... 23 1 1 46.00 46 31 15 0 0 0 0
..................................................GTTAGCCGAAGTTGTTTGG.............................................................................................. 19 1 1 39.00 39 4 35 0 0 0 0
..................................................GTGAGCCGAAGTTGTTTTGAGCT.......................................................................................... 23 1 1 38.00 38 12 24 0 1 0 1
..................................................GTGAGCCGAAGTTGTTTGGAT............................................................................................ 21 1 1 36.00 36 16 19 0 1 0 0
..................................................GTGAGCCGAAGTTGTTTGGATC........................................................................................... 22 1 1 35.00 35 21 13 0 1 0 0
..................................................GTGAGCCGAAGTTGTTTGTAGCT.......................................................................................... 23 1 1 33.00 33 10 23 0 0 0 0
..................................................GTGAGCCGAAGTTGTTTGGAA............................................................................................ 21 1 1 33.00 33 17 11 1 2 0 2
..................................................GTGAGACGAAGTTGTTTGGAGCT.......................................................................................... 23 1 1 33.00 33 15 17 0 1 0 0
..................................................GTGAGCCGAAGATGTTTGGAGCT.......................................................................................... 23 1 1 30.00 30 28 2 0 0 0 0
..................................................GTGAGCCGAAGTTGTTTGT.............................................................................................. 19 1 1 28.00 28 5 22 1 0 0 0
..................................................GTGAGCCGAAGTTGTTTGGACCT.......................................................................................... 23 1 1 26.00 26 18 8 0 0 0 0
..................................................GTGAGCCGAAGCTGTTTGGAGCT.......................................................................................... 23 1 1 25.00 25 16 6 1 2 0 0
..................................................GTGAGCCGAATTTGTTTGGAGCT.......................................................................................... 23 1 1 25.00 25 15 10 0 0 0 0
..................................................GTGATCCGAAGTTGTTTGG.............................................................................................. 19 1 1 23.00 23 9 14 0 0 0 0
..................................................GTTAGCCGAAGTTGTTTGGAG............................................................................................ 21 1 1 23.00 23 3 20 0 0 0 0
..................................................GTTAGCCGAAGTTGTTTGGAGC........................................................................................... 22 1 1 23.00 23 3 20 0 0 0 0
..................................................GTGAGCCGAAGTCGTTTGGAGCT.......................................................................................... 23 1 1 22.00 22 20 1 0 1 0 0
..................................................GTGAGCCGAAGTTGTTTGGAGTT.......................................................................................... 23 1 1 22.00 22 14 7 1 0 0 0
..................................................GTGAGCCGAAGTTGTTTGGAAC........................................................................................... 22 1 1 22.00 22 17 5 0 0 0 0
...................................................TGAGCCGAAGTTGTTTGGAGCT.......................................................................................... 22 0 1 20.00 20 0 1 18 0 1 0
..................................................GTGAGCCGAAGTTGTTTGTAG............................................................................................ 21 1 1 19.00 19 4 8 0 7 0 0
..................................................GTGAGCCGAAGTAGTTTGGAGCT.......................................................................................... 23 1 1 19.00 19 17 2 0 0 0 0
..................................................GTTAGCCGAAGTTGTTTGGA............................................................................................. 20 1 1 19.00 19 3 16 0 0 0 0
..................................................GTGATCCGAAGTTGTTTGGAG............................................................................................ 21 1 1 18.00 18 10 8 0 0 0 0
..................................................GCGAGCCGAAGTTGTTTGGAGCT.......................................................................................... 23 1 1 18.00 18 16 1 0 1 0 0
..................................................GTGAGCCGGAGTTGTTTGGAGCT.......................................................................................... 23 1 1 17.00 17 2 3 12 0 0 0
..................................................GTGATCCGAAGTTGTTTGGAGC........................................................................................... 22 1 1 17.00 17 6 11 0 0 0 0
..................................................GTGAGCCTAAGTTGTTTGGAGCT.......................................................................................... 23 1 1 17.00 17 7 9 1 0 0 0
..................................................GTGAGCCGAAGTTGTTTTGAG............................................................................................ 21 1 1 16.00 16 5 6 1 3 0 1
..................................................GTGATCCGAAGTTGTTTGGA............................................................................................. 20 1 1 16.00 16 6 10 0 0 0 0
...................................................TGAGCCGAAGTTGTTTGGAGC........................................................................................... 21 0 1 15.00 15 0 0 15 0 0 0
..................................................GTGAGCCGAAGTTGTCTGGAGCT.......................................................................................... 23 1 1 15.00 15 12 2 0 1 0 0
..................................................GTGAGCCGAAGGTGTTTGGAGCT.......................................................................................... 23 1 1 15.00 15 11 1 0 3 0 0
..................................................GTGAGCCGAAGTTGTTTGGAGCG.......................................................................................... 23 1 1 15.00 15 8 7 0 0 0 0
..................................................GTGAGCAGAAGTTGTTTGGAGCT.......................................................................................... 23 1 1 15.00 15 8 7 0 0 0 0
..................................................GGGAGCCGAAGTTGTTTGGAGCT.......................................................................................... 23 1 1 14.00 14 8 1 0 1 4 0
..................................................GAGAGCCGAAGTTGTTTGGAGCT.......................................................................................... 23 1 1 14.00 14 11 2 0 1 0 0
..................................................GTGAGACGAAGTTGTTTGGAG............................................................................................ 21 1 1 13.00 13 4 7 0 2 0 0
..................................................GTGAGCCGAAGTTGTTTGGACC........................................................................................... 22 1 1 13.00 13 8 5 0 0 0 0
..................................................GTGAGCCGAAGTTGTTTGGAGCTA......................................................................................... 24 1 1 13.00 13 3 8 0 2 0 0
..................................................GTGAGCCGAAGTTATTTGGAGCT.......................................................................................... 23 1 1 13.00 13 9 3 0 1 0 0
...................................................TGAGCCGAAGTTGTTTGG.............................................................................................. 18 0 1 13.00 13 0 0 13 0 0 0
..................................................GTGAGCCGAAGTTGTTTGGAGCC.......................................................................................... 23 1 1 13.00 13 10 2 0 0 1 0
..................................................GTGAGCCGAAGTTGTATGGAGCT.......................................................................................... 23 1 1 13.00 13 12 1 0 0 0 0
..................................................GTGAGACGAAGTTGTTTGGAGC........................................................................................... 22 1 1 12.00 12 3 8 0 1 0 0
..................................................GTGAGCCGAAGTTCTTTGGAGCT.......................................................................................... 23 1 1 12.00 12 9 1 0 2 0 0
..................................................GTGAGACGAAGTTGTTTGG.............................................................................................. 19 1 1 12.00 12 5 7 0 0 0 0
..................................................GTGAGCCGAAGTTGTTTGGAGCA.......................................................................................... 23 1 1 12.00 12 2 10 0 0 0 0
..................................................GTGAGCAGAAGTTGTTTGGAGC........................................................................................... 22 1 1 11.00 11 3 8 0 0 0 0
..................................................GTGCGCCGAAGTTGTTTGGAGCT.......................................................................................... 23 1 1 11.00 11 11 0 0 0 0 0
..................................................GTGAGCCGCAGTTGTTTGGAGCT.......................................................................................... 23 1 1 11.00 11 6 2 2 1 0 0
..................................................GTGAGTCGAAGTTGTTTGGAGCT.......................................................................................... 23 1 1 10.00 10 4 6 0 0 0 0
..................................................GTGAGCCGAGGTTGTTTGGAGCT.......................................................................................... 23 1 1 10.00 10 8 2 0 0 0 0
..................................................GTGATCCGAAGTTGTTTGGATCT.......................................................................................... 23 2 1 10.00 10 4 6 0 0 0 0
..................................................GTGAGCCGAAGTTGTTCGGAGCT.......................................................................................... 23 1 1 10.00 10 2 6 1 1 0 0
..................................................GTGAGCCGAATTTGTTTGG.............................................................................................. 19 1 1 10.00 10 4 5 1 0 0 0
..................................................GGGAGCCGAAGTTGTTTGGAGC........................................................................................... 22 1 1 10.00 10 5 0 0 2 3 0
..................................................GTGAGCCGAAGATGTTTGG.............................................................................................. 19 1 1 10.00 10 8 2 0 0 0 0
..................................................TTGAGCCGAAGTTGTTTGGAGCT.......................................................................................... 23 1 1 9.00 9 4 5 0 0 0 0
..................................................GTGAGCCGAAGTTGTTTGGTT............................................................................................ 21 2 1 9.00 9 5 4 0 0 0 0
..................................................GTGAGCCGAAGTTGTTTGGT............................................................................................. 20 1 1 9.00 9 3 5 0 1 0 0
..................................................GTGAGCCGAAATTGTTTGGAGCT.......................................................................................... 23 1 1 9.00 9 7 2 0 0 0 0
..................................................GTGAGCTGAAGTTGTTTGGAGCT.......................................................................................... 23 1 1 9.00 9 5 4 0 0 0 0
..................................................GTGAGACGAAGTTGTTTGGA............................................................................................. 20 1 1 9.00 9 5 4 0 0 0 0
..................................................GTGGGCCGAAGTTGTTTGGAGCT.......................................................................................... 23 1 1 9.00 9 3 4 1 1 0 0
..................................................GTGAGCCGAAGTTGTTTAGAGCT.......................................................................................... 23 1 1 9.00 9 3 6 0 0 0 0
..................................................GTGAGCCGAAGTTGTCTGGAGC........................................................................................... 22 1 1 9.00 9 9 0 0 0 0 0
..................................................GTGAGCCGAAGTTGTTTGGAGCTTA........................................................................................ 25 1 1 9.00 9 5 4 0 0 0 0
..................................................GTGAGCCGAACTTGTTTGGAGCT.......................................................................................... 23 1 1 9.00 9 8 1 0 0 0 0
..................................................GTGAGCCTAAGTTGTTTGGAGC........................................................................................... 22 1 1 9.00 9 3 5 0 1 0 0
..................................................GTGAGCCGAAGTTGTTTGTA............................................................................................. 20 1 1 9.00 9 4 5 0 0 0 0
..................................................GGGAGCCGAAGTTGTTTGGA............................................................................................. 20 1 1 9.00 9 7 0 0 2 0 0
..................................................GTGACCCGAAGTTGTTTGGAGCT.......................................................................................... 23 1 1 8.00 8 7 1 0 0 0 0
..................................................GTGAGCCGAAGTTGTTTCGAGCT.......................................................................................... 23 1 1 8.00 8 7 1 0 0 0 0
..................................................GTGAGCCGAAGTTGTTTGTAGC........................................................................................... 22 1 1 8.00 8 2 3 0 3 0 0
..................................................GTGAGCCGGAGTTGTTTGGAGC........................................................................................... 22 1 1 8.00 8 2 0 6 0 0 0
..................................................GTGAGCCGAAGTTGTTTTGA............................................................................................. 20 1 1 8.00 8 4 2 0 1 0 1
..................................................GGGAGCCGAAGTTGTTTGGAG............................................................................................ 21 1 1 8.00 8 4 0 0 2 2 0
..................................................GTGAGCCGAAGTTTTTTGGAGC........................................................................................... 22 1 1 8.00 8 2 5 0 1 0 0
..................................................GAGAGCCGAAGTTGTTTGGAGC........................................................................................... 22 1 1 8.00 8 8 0 0 0 0 0
..................................................GTGAGCCGAAGTCGTTTGGAG............................................................................................ 21 1 1 8.00 8 7 1 0 0 0 0
..................................................GTGAGCCGAAGTTGTTTGGAGCTG......................................................................................... 24 0 1 8.00 8 5 3 0 0 0 0
..................................................GGGAGCCGAAGTTGTTTGG.............................................................................................. 19 1 1 8.00 8 3 0 1 4 0 0
..................................................GTGATCCGAAGTTGTTTGGAT............................................................................................ 21 2 1 8.00 8 1 7 0 0 0 0
..................................................GTGAGCCGAAGTTGTTTGGAC............................................................................................ 21 1 1 8.00 8 3 4 0 1 0 0
..................................................GTGATCCGAAGTTGTTTGTAGCT.......................................................................................... 23 2 1 8.00 8 2 6 0 0 0 0
..........GCAGCTGGAGAGCGACATC...................................................................................................................................... 19 0 1 7.00 7 0 0 5 0 2 0
..................................................GCGAGCCGAAGTTGTTTGGAGC........................................................................................... 22 1 1 7.00 7 4 1 0 1 1 0
..................................................GTGAGCCGAAGCTGTTTGGAGC........................................................................................... 22 1 1 7.00 7 4 0 0 3 0 0
..................................................TTGAGCCGAAGTTGTTTGGAG............................................................................................ 21 1 1 7.00 7 4 2 1 0 0 0
..................................................GTGAGCCGAAGTTGTTTTGAGC........................................................................................... 22 1 1 7.00 7 4 1 0 1 0 1
..................................................GTGAGCCGAAGTAGTTTGGA............................................................................................. 20 1 1 7.00 7 6 1 0 0 0 0
...........................TCGCCATTGTGCGCGTGGAGCA.................................................................................................................. 22 0 1 7.00 7 0 1 6 0 0 0
..................................................GTGAGCCGAAGATGTTTGGAG............................................................................................ 21 1 1 7.00 7 5 1 0 1 0 0
..................................................GTGAGCCGAAGTTGTTTGCAGC........................................................................................... 22 1 1 7.00 7 4 2 0 1 0 0
..................................................GTGAGCCGAAGCTGTTTGGAG............................................................................................ 21 1 1 7.00 7 5 2 0 0 0 0
..................................................GTGAGCAGAAGTTGTTTGGAG............................................................................................ 21 1 1 7.00 7 5 2 0 0 0 0
..................................................GTGAGCCGAAGTTGTTTTG.............................................................................................. 19 1 2 6.50 13 3 3 0 7 0 0
..................................................GTGAGCCGAAGTTGTTTCGAG............................................................................................ 21 1 1 6.00 6 3 1 0 2 0 0
..................................................GTGAGCCGCAGTTGTTTGGAGC........................................................................................... 22 1 1 6.00 6 4 1 1 0 0 0
..................................................GTGAGCCGAAGTTGTTTGGAGTTT......................................................................................... 24 2 1 6.00 6 5 0 0 1 0 0
..................................................GTGAGCCGAAGGTGTTTGGAG............................................................................................ 21 1 1 6.00 6 4 0 0 2 0 0
..................................................GTGAGCCGTAGTTGTTTGGAGCT.......................................................................................... 23 1 1 6.00 6 3 1 1 1 0 0
..................................................GTGAGCCGAAGTTGTCTGGAG............................................................................................ 21 1 1 6.00 6 5 1 0 0 0 0
...................................................TGAGCCGAAGTTGTTTGGAG............................................................................................ 20 0 1 6.00 6 0 0 6 0 0 0
..................................................GCGAGCCGAAGTTGTTTGGAG............................................................................................ 21 1 1 6.00 6 3 0 0 3 0 0
..................................................GTGAGCCGAAGATGTTTGGA............................................................................................. 20 1 1 6.00 6 5 1 0 0 0 0
..................................................GTGAGCCAAAGTTGTTTGGAGCT.......................................................................................... 23 1 1 6.00 6 4 2 0 0 0 0
..................................................GTGAGCCGAAGTCGTTTGGAGC........................................................................................... 22 1 1 6.00 6 6 0 0 0 0 0
..................................................GTGAGCCGAAGTTGTTTGGGGCT.......................................................................................... 23 1 1 6.00 6 0 5 0 1 0 0
..................................................GTGAGCCGAAGTAGTTTGGAGC........................................................................................... 22 1 1 6.00 6 6 0 0 0 0 0
..................................................GTTATCCGAAGTTGTTTGGAGCT.......................................................................................... 23 2 1 5.00 5 1 4 0 0 0 0
..................................................GAGAGCCGAAGTTGTTTGGAG............................................................................................ 21 1 1 5.00 5 5 0 0 0 0 0
..................................................GTGAGCCGAAGTTGTTTGGAAA........................................................................................... 22 2 1 5.00 5 3 2 0 0 0 0
..................................................GTGAGCCGAGGTTGTTTGGAG............................................................................................ 21 1 1 5.00 5 1 4 0 0 0 0
..................................................GTGAGCCGCAGTTGTTTGGA............................................................................................. 20 1 1 5.00 5 3 1 0 1 0 0
..................................................GTGAGCCGAAGTTTTTTGGAGCT.......................................................................................... 23 1 1 5.00 5 4 1 0 0 0 0
..................................................GTGAGCCGAAGTAGTTTGG.............................................................................................. 19 1 1 5.00 5 3 2 0 0 0 0
..................................................GTGAACCGAAGTTGTTTGGAGCT.......................................................................................... 23 1 1 5.00 5 2 3 0 0 0 0
...................................................GTAGCCGAAGTTGTTTGGAGCT.......................................................................................... 22 2 1 5.00 5 3 2 0 0 0 0
..................................................GTGAGACGAAGTTGTTTGGAGAT.......................................................................................... 23 2 1 5.00 5 2 3 0 0 0 0
..................................................GTGAGCCGAAGTTGTCTGG.............................................................................................. 19 1 1 5.00 5 2 3 0 0 0 0
..................................................GTGAGCCGAAGCTGTTTGGA............................................................................................. 20 1 1 5.00 5 0 3 0 2 0 0
..................................................GTGAGCCGAAGTTGTTTGGCG............................................................................................ 21 1 1 5.00 5 2 0 0 3 0 0
..................................................GTGAGCCGAAGTTGTTTGAAGCT.......................................................................................... 23 1 1 5.00 5 0 5 0 0 0 0
..................................................GTGAGCCGAAGTTGTTTGCAG............................................................................................ 21 1 1 5.00 5 1 2 0 2 0 0
..................................................GTGAGCCTAAGTTGTTTGG.............................................................................................. 19 1 1 5.00 5 1 4 0 0 0 0
..................................................GTGAGCCGAAGTTGCTTGGAGC........................................................................................... 22 1 1 5.00 5 1 2 0 2 0 0
..................................................GTGAGCCGAAGTTGTTTGGGGC........................................................................................... 22 1 1 5.00 5 3 1 0 1 0 0
..................................................GTGAGCCGAAGTTGTTTCGAGC........................................................................................... 22 1 1 5.00 5 2 3 0 0 0 0
..................................................GTGAGCTGAAGTTGTTTGGAG............................................................................................ 21 1 1 5.00 5 1 3 1 0 0 0
..................................................GTGAGTCGAAGTTGTTTGG.............................................................................................. 19 1 1 5.00 5 1 4 0 0 0 0
..................................................GTGAGCCGAAGTTGTTTGGGG............................................................................................ 21 1 1 5.00 5 1 1 0 3 0 0
..................................................GTGAGCCGAAGTTGTTTT............................................................................................... 18 1 2 4.50 9 0 9 0 0 0 0
..................................................GTGAGCAGAAGTTGTTTGG.............................................................................................. 19 1 1 4.00 4 1 2 0 1 0 0
..................................................GTGAGCTGAAGTTGTTTGGAGC........................................................................................... 22 1 1 4.00 4 2 2 0 0 0 0
..................................................GTGAGCCGAAGCTGTTTGG.............................................................................................. 19 1 1 4.00 4 2 1 0 1 0 0
..................................................GTGAGCCGTAGTTGTTTGGAGC........................................................................................... 22 1 1 4.00 4 0 1 3 0 0 0
..................................................GTGAGCCGAAATTGTTTGGAGC........................................................................................... 22 1 1 4.00 4 4 0 0 0 0 0
...................................................TGAGCCGAAGTTGTTTGGA............................................................................................. 19 0 1 4.00 4 0 0 4 0 0 0
..................................................GTAAGCCGAAGTTGTTTGGAGCT.......................................................................................... 23 1 1 4.00 4 3 1 0 0 0 0
..................................................GTGAGCCGAGGTTGTTTGG.............................................................................................. 19 1 1 4.00 4 0 2 0 2 0 0
..................................................GTGAGCCGAAGTTGCTTGGAGCT.......................................................................................... 23 1 1 4.00 4 2 1 0 1 0 0
..................................................GTGAGCCGGAGTTGTTTGGA............................................................................................. 20 1 1 4.00 4 1 1 2 0 0 0
..................................................GTGAGCCGAAGTTGTTTGGATCTT......................................................................................... 24 2 1 4.00 4 3 1 0 0 0 0
..................................................GTGAGCCGCAGTTGTTTGG.............................................................................................. 19 1 1 4.00 4 0 4 0 0 0 0
..................................................GTGAGCGGAAGTTGTTTGGAGCT.......................................................................................... 23 1 1 4.00 4 4 0 0 0 0 0
..................................................GTGAGCCGACGTTGTTTGGAGCT.......................................................................................... 23 1 1 4.00 4 3 1 0 0 0 0
..................................................GTGAGCCGAAGTTGTATGGA............................................................................................. 20 1 1 4.00 4 4 0 0 0 0 0
..................................................GTGAGCCGAAGTTGTTTGAAGC........................................................................................... 22 1 1 4.00 4 2 1 0 1 0 0
..................................................GTGAGCCGTAGTTGTTTGGAG............................................................................................ 21 1 1 4.00 4 0 0 2 2 0 0
.................................................CGTGAGCCGAAGTTGTTTGG.............................................................................................. 20 1 1 4.00 4 1 2 1 0 0 0
..........................ATCGCCATTGTGCGCGTGGAGC................................................................................................................... 22 0 1 4.00 4 0 0 1 0 2 1
..................................................GTGAGCCGAAATTGTTTGGAG............................................................................................ 21 1 1 4.00 4 4 0 0 0 0 0
..................................................GTGAGCCGCAGTTGTTTGGAG............................................................................................ 21 1 1 4.00 4 1 1 0 2 0 0
..................................................GTGAGCAGAAGTTGTTTGGA............................................................................................. 20 1 1 4.00 4 0 4 0 0 0 0
...............................................................................................................................CTTCGACCTGGTCAAGGAGC................ 20 0 1 4.00 4 1 1 2 0 0 0
..................................................GTGAGCCGAAGTTGTATGGAGC........................................................................................... 22 1 1 4.00 4 3 1 0 0 0 0
..................................................GTCAGCCGAAGTTGTTTGGAGCT.......................................................................................... 23 1 1 4.00 4 4 0 0 0 0 0
..................................................GTGAGCCGAGGTTGTTTGGAGC........................................................................................... 22 1 1 4.00 4 2 1 0 1 0 0
..................................................GTGAGCCGAAGTTGTTTGGTGCT.......................................................................................... 23 1 1 4.00 4 1 2 0 1 0 0
..................................................GTGAGCTGAAGTTGTTTGGA............................................................................................. 20 1 1 4.00 4 1 3 0 0 0 0
..................................................GTGAGCCGAATTTGTTTGGAG............................................................................................ 21 1 1 4.00 4 1 3 0 0 0 0
..................................................GTGAGCCGAACTTGTTTGGAG............................................................................................ 21 1 1 4.00 4 3 1 0 0 0 0
..................................................GTGGGCCGAAGTTGTTTGGAGC........................................................................................... 22 1 1 4.00 4 1 3 0 0 0 0
..................................................GTGAGCCGAAGGTGTTTGGA............................................................................................. 20 1 1 4.00 4 4 0 0 0 0 0
..................................................GTGGGCCGAAGTTGTTTGGAG............................................................................................ 21 1 1 3.00 3 2 1 0 0 0 0
..................................................GTGAGCCTAAGTTGTTTGGA............................................................................................. 20 1 1 3.00 3 1 1 0 1 0 0
..................................................GTGAGCCGAATTTGTTTGGA............................................................................................. 20 1 1 3.00 3 0 3 0 0 0 0
...........................TCGCCATTGTGCGCGTGGAGC................................................................................................................... 21 0 1 3.00 3 0 0 3 0 0 0
..................................................GTGAGCCGAAGTTCTTTCGAGCT.......................................................................................... 23 2 1 3.00 3 3 0 0 0 0 0
.....GAGAAGCAGCTGGAGAGCGACA........................................................................................................................................ 22 0 1 3.00 3 0 0 3 0 0 0
..................................................GTGAGCCGTAGTTGTTTGGA............................................................................................. 20 1 1 3.00 3 0 1 1 1 0 0
.......GAAGCAGCTGGAGAGCGACATC...................................................................................................................................... 22 0 1 3.00 3 0 0 2 0 1 0
..................................................TTGAGCCGAAGTTGTTTGGA............................................................................................. 20 1 1 3.00 3 1 2 0 0 0 0
..................................................GTGAGCTGAAGTTGTTTGG.............................................................................................. 19 1 1 3.00 3 1 2 0 0 0 0
..................................................GTGAGCCGAAGTTCTTTGGAG............................................................................................ 21 1 1 3.00 3 0 2 0 1 0 0
..................................................GTGAGCCGAAGTAGTTTGGAG............................................................................................ 21 1 1 3.00 3 3 0 0 0 0 0
..................................................CTGAGCCGAAGTTGTTTGGAGCT.......................................................................................... 23 1 1 3.00 3 3 0 0 0 0 0
........AAGCAGCTGGAGAGCGACATCGCC................................................................................................................................... 24 0 1 3.00 3 1 0 1 0 1 0
..............................................GCAGCTCAGCCCAAGTTGTTTGG.............................................................................................. 23 3 1 3.00 3 0 0 3 0 0 0
..................................................ATGAGCCGAAGTTGTTTGGAGCT.......................................................................................... 23 1 1 3.00 3 1 2 0 0 0 0
..................................................GTGAGCCGAAGTTGTTTGGAACTT......................................................................................... 24 2 1 3.00 3 2 1 0 0 0 0
..................................................GTGAGCCGAAGTTCTTTGGAGC........................................................................................... 22 1 1 3.00 3 3 0 0 0 0 0
..................................................GTGAGCCGAAGTTGTTCGGAG............................................................................................ 21 1 1 3.00 3 1 2 0 0 0 0
..................................................GTGAGCCGAAGTTGTTTGTATCT.......................................................................................... 23 2 1 3.00 3 2 0 0 0 0 1
..................................................GTTATCCGAAGTTGTTTGGAGC........................................................................................... 22 2 1 3.00 3 1 2 0 0 0 0
..................................................GTGAGTCGAAGTTGTTTGGAG............................................................................................ 21 1 1 3.00 3 2 1 0 0 0 0
..................................................GTGAGCCGAAGTTGTTTGGCGCT.......................................................................................... 23 1 1 3.00 3 3 0 0 0 0 0
..................................................GTGAGCCGAAGTTATTTGGAG............................................................................................ 21 1 1 3.00 3 2 1 0 0 0 0
..................................................GTGAGCCGAAGTTGTTTGTAT............................................................................................ 21 2 1 3.00 3 0 2 0 1 0 0
..................................................GTGAGCCGAAGTTGTTTGGAGTA.......................................................................................... 23 2 1 3.00 3 1 1 1 0 0 0
..................................................GTGAGCCGAAGTTGTTTGCAGCT.......................................................................................... 23 1 1 3.00 3 1 2 0 0 0 0
..................................................TTGAGCCGAAGTTGTTTGG.............................................................................................. 19 1 1 3.00 3 2 0 1 0 0 0
..................................................GTGAGCCTAAGTTGTTTGGAG............................................................................................ 21 1 1 3.00 3 1 2 0 0 0 0
..................................................GTGAGCCGGACTTGTTTGGAGCT.......................................................................................... 23 2 1 3.00 3 3 0 0 0 0 0
..................................................GTGAGCCGGAGTTGTTTGGAG............................................................................................ 21 1 1 3.00 3 0 1 2 0 0 0
..................................................GTGAGCCGAAGTTGCTTGG.............................................................................................. 19 1 1 3.00 3 1 2 0 0 0 0
.............................GCCATTGTGCGCGTGGAGCA.................................................................................................................. 20 0 1 3.00 3 0 0 3 0 0 0
..................................................GTGGGCCGAAGTTGTTTGG.............................................................................................. 19 1 1 3.00 3 1 1 0 1 0 0
..................................................GTGAGTCGAAGTTGTTTGGAGC........................................................................................... 22 1 1 3.00 3 0 2 0 1 0 0
..................................................GTGAGCCGAAGTTGTGTGGAGCT.......................................................................................... 23 1 1 3.00 3 3 0 0 0 0 0
..................................................GTGAGCCGAAGTTGTTTGGAGCTTG........................................................................................ 25 2 1 3.00 3 2 1 0 0 0 0
..................................................GTGAGCCGAAGTTATTTGG.............................................................................................. 19 1 1 3.00 3 1 2 0 0 0 0
..................................................GTGAGCCGAAGTTGTTTAGAG............................................................................................ 21 1 1 3.00 3 2 1 0 0 0 0
..................................................GTGAGCCGAAGTTTTTTGGA............................................................................................. 20 1 1 3.00 3 1 2 0 0 0 0
..................................................GTGAGCCGAAGTTTTTTAGAGCT.......................................................................................... 23 2 1 3.00 3 3 0 0 0 0 0
..................................................GTGCGCCGAAGTTGTTTGGAG............................................................................................ 21 1 1 3.00 3 3 0 0 0 0 0
..................................................GTGAGCCGAAGTTGTTTGGACT........................................................................................... 22 2 1 3.00 3 1 1 0 1 0 0
...........................TCGCCATTGTGCGCGTGGAGCAGGTATC............................................................................................................ 28 3 1 3.00 3 1 0 2 0 0 0
...............................................CAGCTCAGCCCAAGTTGTTTG............................................................................................... 21 3 2 2.50 5 0 0 5 0 0 0
..................................................GTTAGCCGAAGATGTTTGGAGCT.......................................................................................... 23 2 1 2.00 2 0 2 0 0 0 0
..................................................GTGAGCCGATGTTGTTTGGAGCT.......................................................................................... 23 1 1 2.00 2 1 1 0 0 0 0
..................................................GTTAGCCGAAGTTGTTTGGATC........................................................................................... 22 2 1 2.00 2 1 1 0 0 0 0
..................................................GTGAGCCGAAGTGGTTTGG.............................................................................................. 19 1 1 2.00 2 2 0 0 0 0 0
..................................................GTGAGCCGAAGTTGTTTGGAGATT......................................................................................... 24 2 1 2.00 2 0 2 0 0 0 0
..................................................GTGAGCCGAAGTTGTTTAG.............................................................................................. 19 1 1 2.00 2 2 0 0 0 0 0
..................................................GTTAGCCGAAGTTGTTTGGATCT.......................................................................................... 23 2 1 2.00 2 0 2 0 0 0 0
........AAGCAGCTGGAGAGCGACATCGCCA.................................................................................................................................. 25 0 1 2.00 2 0 2 0 0 0 0
....................................................GAGCCGAAGTTGTTTGGAGCT.......................................................................................... 21 0 1 2.00 2 1 1 0 0 0 0
..................................................GTAAGCCGAAGTTGTTTGGAG............................................................................................ 21 1 1 2.00 2 0 2 0 0 0 0
..................................................GTCAGCCGAAGTTGTTTGG.............................................................................................. 19 1 1 2.00 2 1 1 0 0 0 0
..................................................GTGAGCCGAAGTTGTTTGGAAT........................................................................................... 22 2 1 2.00 2 2 0 0 0 0 0
..................................................GTGAGCCTAAGTTGTTTGGATCT.......................................................................................... 23 2 1 2.00 2 1 1 0 0 0 0
..................................................GTGAGCCGAAGTTGTTTCGA............................................................................................. 20 1 1 2.00 2 2 0 0 0 0 0
..................................................GTGAGCCGAAGTTGTTTGGCT............................................................................................ 21 2 1 2.00 2 0 0 0 2 0 0
............................CGCCATTGTGCGCGTGGAGCAGGTA.............................................................................................................. 25 1 1 2.00 2 0 0 2 0 0 0
..................................................GTGAGCCGACGTTGTTTGGAGCTTT........................................................................................ 25 3 1 2.00 2 1 1 0 0 0 0
..................................................GTGAGCCGAAGTTGTTTGA.............................................................................................. 19 1 1 2.00 2 1 1 0 0 0 0
..................................................GTGAGCCGAAGGTGTTTGTAGC........................................................................................... 22 2 1 2.00 2 0 0 0 2 0 0
..................................................GTGAGCCGTAATTGTTTGGAGCT.......................................................................................... 23 2 1 2.00 2 2 0 0 0 0 0
..................................................GTGAGCCAAAGTTGTTTGG.............................................................................................. 19 1 1 2.00 2 0 2 0 0 0 0
..................................................GTGAGCCGGACTTGTTTGGA............................................................................................. 20 2 1 2.00 2 2 0 0 0 0 0
..................................................GTTAGACGAAGTTGTTTGGAGCT.......................................................................................... 23 2 1 2.00 2 0 2 0 0 0 0
..................................................GTGAGCCGAAGTGGTTTGGAGCT.......................................................................................... 23 1 1 2.00 2 2 0 0 0 0 0
.......................................................................................................................................TGGTCAAGGAGCAGGCCAAC........ 20 0 1 2.00 2 0 0 2 0 0 0
..................................................GTGAGCCGATGTTGTTTGGA............................................................................................. 20 1 1 2.00 2 1 0 0 1 0 0
...............TGGAGAGCGACATCGCCATTGTGCGCG......................................................................................................................... 27 0 1 2.00 2 0 0 2 0 0 0
..................................................GTGAGCCGAAGTTGTTTGGAGCTAT........................................................................................ 25 2 1 2.00 2 1 1 0 0 0 0
..................................................GTGAGCCGAAGTGGTTTGGAG............................................................................................ 21 1 1 2.00 2 2 0 0 0 0 0
................................................................................................................................TTCGACCTGGTCAAGGAGCAGGC............ 23 0 1 2.00 2 0 0 2 0 0 0
..................................................GTGAGCCGAAATTGTTTGGA............................................................................................. 20 1 1 2.00 2 2 0 0 0 0 0
..................................................GTGAGCCGAAGTGGTTTGGA............................................................................................. 20 1 1 2.00 2 2 0 0 0 0 0
.............................GCCATTGTGCGCGTGGAGCAGGTA.............................................................................................................. 24 1 1 2.00 2 0 0 2 0 0 0
................................................AGCTCAGCCCAAGTTGTTTGG.............................................................................................. 21 3 1 2.00 2 0 0 2 0 0 0
...............................................................................................................................CTTCGACCTGGTCAAGGAGCA............... 21 0 1 2.00 2 0 0 2 0 0 0
..................................................GAGAGCCGACGTTGTTTGGAGC........................................................................................... 22 2 1 2.00 2 2 0 0 0 0 0
.......GAAGCAGCTGGAGAGCGACA........................................................................................................................................ 20 0 1 2.00 2 1 0 1 0 0 0
..................................................GTGAGCCGAAGGTGTTTGGAGCTT......................................................................................... 24 2 1 2.00 2 1 0 0 1 0 0
..................................................GTGAGCCGAACTTGTTTGGA............................................................................................. 20 1 1 2.00 2 2 0 0 0 0 0
..................................................GTGAGCCGAAGTTGTTTGGAGAA.......................................................................................... 23 2 1 2.00 2 1 1 0 0 0 0
.................................................CGTGAGCCGAAGTTGTTTGGAGCT.......................................................................................... 24 1 1 2.00 2 1 0 1 0 0 0
GTACCGAGAAGCAGCTGGA................................................................................................................................................ 19 0 1 2.00 2 1 0 0 0 0 1
..................................................GTGAGCCGGAGTTGTTTGG.............................................................................................. 19 1 1 2.00 2 2 0 0 0 0 0
..................................................GTGAGCCGAAATTGTTTGG.............................................................................................. 19 1 1 2.00 2 1 0 0 1 0 0
..................................................GTGAGCCGTAGTTGTTTGG.............................................................................................. 19 1 1 2.00 2 2 0 0 0 0 0
..................................................GTGAGCCGAAGTTGTATGGAG............................................................................................ 21 1 1 2.00 2 2 0 0 0 0 0
......................................................................................................................GCCCTTCCCCTTCGACCTGGT........................ 21 0 1 2.00 2 0 0 2 0 0 0
..................................................GTGAGCCGAAGTTGTATGG.............................................................................................. 19 1 1 2.00 2 2 0 0 0 0 0
..................................................GTGAGACGAAGTTGTTTGGAGCTT......................................................................................... 24 2 1 2.00 2 1 1 0 0 0 0
..................................................GTGAGCCGAAGTTCTTTGGA............................................................................................. 20 1 1 2.00 2 2 0 0 0 0 0
..................................................GTGAGCCGAAGTTGTTTTGATCT.......................................................................................... 23 2 1 2.00 2 0 2 0 0 0 0
..........GCAGCTGGAGAGCGACATCGCCATTG............................................................................................................................... 26 0 1 2.00 2 0 2 0 0 0 0
..................................................GTGAGCCGAAGTTGTTTAGA............................................................................................. 20 1 1 2.00 2 2 0 0 0 0 0
..................................................GTGAGCCGAAGTTGTTTGGAGCTGA........................................................................................ 25 0 1 2.00 2 2 0 0 0 0 0
..................................................GTGATCCGAAGTTGTTTGGAGT........................................................................................... 22 2 1 2.00 2 1 1 0 0 0 0
..................................................GTGAGCCGAAGTTTTTTGGAG............................................................................................ 21 1 1 2.00 2 1 1 0 0 0 0
..................................................GTGAGCCGAACTTGTTTGG.............................................................................................. 19 1 1 2.00 2 2 0 0 0 0 0
............................CGCCATTGTGCGCGTGGAGCAGGT............................................................................................................... 24 0 1 2.00 2 0 0 2 0 0 0
..................................................GTGAGCCGGATTTGTTTGGAGC........................................................................................... 22 2 1 2.00 2 2 0 0 0 0 0
..................................................GTGAGCCGAAGTTATTTAGAGCT.......................................................................................... 23 2 1 2.00 2 2 0 0 0 0 0
..................................................GTGAGCCGAAGATGTTTGGAGT........................................................................................... 22 2 1 2.00 2 1 1 0 0 0 0
..................................................GTGAGCCGGATTTGTTTGGAGCT.......................................................................................... 23 2 1 2.00 2 2 0 0 0 0 0
..................................................GTGAGCAGAAGTTGTTGGGAGC........................................................................................... 22 2 1 2.00 2 1 1 0 0 0 0
..................................................GTGAGCCGAAGTTGTTTAGAGC........................................................................................... 22 1 1 2.00 2 0 2 0 0 0 0
..................................................GTGAGCCGAAGTTGTTTGTG............................................................................................. 20 2 1 2.00 2 0 2 0 0 0 0
..................................................GTGAGCCGAAGTCGTTTGG.............................................................................................. 19 1 1 2.00 2 2 0 0 0 0 0
..................................................GTGAGCCGAAGGTGTTTGG.............................................................................................. 19 1 1 2.00 2 1 0 0 1 0 0
..................................................GTGAGCCGAAGTTGTTTGGAGGT.......................................................................................... 23 1 1 2.00 2 1 0 0 1 0 0
..................................................GTTAGCCGAAGTTGTTTGTAG............................................................................................ 21 2 1 2.00 2 1 1 0 0 0 0
............................................................................................................................CCCCTTCGACCTGGTCAAG.................... 19 0 1 2.00 2 0 0 2 0 0 0
..................................................GTGAGCCGAAGATGTTTGGAGC........................................................................................... 22 1 1 2.00 2 2 0 0 0 0 0
..................................................GCGAGCCGAAGTTGTTTGG.............................................................................................. 19 1 1 2.00 2 1 1 0 0 0 0
..................................................GTGATCCGAAGTTGTTTGGAA............................................................................................ 21 2 1 2.00 2 1 1 0 0 0 0
.................................................................................................................................TCGACCTGGTCAAGGAGCAGGCCAACC....... 27 0 1 2.00 2 0 0 1 1 0 0
.............GCTGGAGAGCGACATCGCC................................................................................................................................... 19 0 1 2.00 2 0 0 2 0 0 0
................................................................................................................................TTCGACCTGGTCAAGGAGCAGGCCAACC....... 28 0 1 2.00 2 0 0 2 0 0 0

Anti-sense strand reads

CATGGCTCTTCGTCGACCTCTCGCTGTAGCGGTAACACGCGCACCTCGTCCACTCGGCTTCAACAAACCTCGACTCAAATACTCGAAACTCGACTTAGAGGAAACCAAGAATCCATAGCGGGAAGGGGAAGCTGGACCAGTTCCTCGTCCGGTTGGAGATGTT

**************************************************..(((((((((..((((((((((.........))))))))))........)))))))))....************************************************** 		Read size # Mismatch Hit Count Total Norm Total M044

female body

 V106

head

 V105

male body		 V055

head

 M058

embryo

 V039

embryo
...............................................GTCGAGTCGGGTTCAACAAAC............................................................................................... 21 3 2 1.50 3 2 0 1 0 0 0
..............................................CGTCGAGTCGGGTTCAACAAA................................................................................................ 21 3 4 1.25 5 2 2 0 1 0 0
................................................TCGAGTCGGGTTCAACAAACC.............................................................................................. 21 3 1 1.00 1 0 1 0 0 0 0
.............................................TCGTCGAGTCGGGTTCAACAA................................................................................................. 21 3 6 0.83 5 3 0 1 1 0 0
.............................................TCGTCGAGTCGGGTTCAACAAAC............................................................................................... 23 3 2 0.50 1 1 0 0 0 0 0
...............................................GTCGAGTCGGGTTCAACAAA................................................................................................ 20 3 12 0.42 5 4 0 0 0 0 1
.......................................................................................ACCAGACTTAGAGGAAACCAC....................................................... 21 3 3 0.33 1 0 0 0 0 1 0
..............................................CGTCGAGTCGGGTTCAACAA................................................................................................. 20 3 11 0.27 3 1 1 1 0 0 0
.............................................TCGTCGAGTCGGATTCAACAA................................................................................................. 21 3 4 0.25 1 1 0 0 0 0 0
.................................................CGAGTCGGGTTCAACAAACC.............................................................................................. 20 3 14 0.14 2 1 0 0 0 1 0
................................................................................................................CCATCGCGGCATGGGGAAG................................ 19 3 11 0.09 1 0 1 0 0 0 0
.............................................................................................................................CTGAAGCTGGACCAGTTC.................... 18 2 15 0.07 1 0 0 0 1 0 0
..............................................................................................................................GGAAGCTGGACGAGTTCA................... 18 2 15 0.07 1 0 0 0 1 0 0
.....................CGATGTAGTGGTAAGACGC........................................................................................................................... 19 3 15 0.07 1 0 1 0 0 0 0
..........................................................................TCCAATTCTCGGAACTCGA...................................................................... 19 3 20 0.05 1 1 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Type Alignment
droAna3 scaffold_13337:13664363-13664523 - dan_232 candidate TGCACGGGCCGTGTCTACTACGATCTGACCAAGACTCGTACCGAGAAGCAGCTGGAGAGCGACATCGCCATTGTGCGCGTGGAGCAGGTGAGCCGAAGTTGTTTGGAGC---------------TGAGTT--T-------ATGAGCT-------------------TTGAG----------------CTGAATCT--CC-TTTGG-TTCTTAGGTATCGCCCTT
droBip1 scf7180000395832:605797-605957 - TGCACGGGCCGTGTCTACTACGATCTGACCAAGACTCGTACCGAGAAGCAACTGGAGAGCGACATCGCCATTGTGCGAGTGGAGCAGGTAAGCCGATGCTGTTTGGAAT---------------TATCTT--T-------TTTTATT-------------------GCTCA----------------CTGAATCA--TC-TTTGT-TTCTTAGGTCTCGCCCTT
droKik1 scf7180000302486:795598-795758 + TGCACGGGTCGCGTCTACTACGACCTGACCAAGACGCGTGCCGACAAGAAGCTGGAGAACGAGGTGGCCATTGTGCGTGTGGAGCAGGTAGGGATT-----C-------AACTTTTTCCTTGAG-----------------------AATGAA--------GTATGCTTTA----------------CTAATTAT--TC-ATTTT-CCCTTAGATTTCGCCCTT
droFic1 scf7180000454113:3650712-3650870 - TGCTCGGGCCGCGTCTACTACGATCTGACCAAGACGCGTGCGGAAAAGAAGCTGGAGAGCGAGATCGCCATTGTGCGCGTGGAGCAGGTGAGTCCTT--ATG-------GCTTTTAA-ACTCTT----------TA-----------AAAATAT--------------TTA----------------CTAATCAATGCT-TGG---TATGCAGATCTCTCCCTT
droEle1 scf7180000491255:3393350-3393508 + TGCTCGGGCCGCGTCTACTACGATCTGACCAAGACGCGCGCGGAAAAGAAGCTGGAGAGCGACATCGCCATTGTGCGCGTGGAGCAGGTGAGTCTTT--CTG-------GCTTTATT-TCTCTA---------------------CTGG-ACAT--------------CTA----------------CTAACTTATATT-TTG-TA-CCCCAGATCTCTCCCTT
droRho1 scf7180000779902:113473-113630 - TGCTCGGGCCGCGTCTACTACGATCTGACCAAGACGCGTACGGAAAAGAAGTTGGAGAGCGACATCGCCATTGTGCGCGTGGAGCAGGTGAGTCTAG--TTT-------ACTGTTTT-TGCTTA-----------------------GGAACAT--------------CTG----------------CTAACTAACATG-TTG-TA-TCCCAGGTGTCTCCCTT
droBia1 scf7180000302428:3154451-3154607 - TGCTCAGGACGCGTCTACTACGATCTGACCAAGGCGCGTGCGGAAAAGAAGCTGGAGAACGACATCGCCATCGTGCGCGTGGAGCAGGTGAGTCTCT--ATT-------GAATCATT-ACTGTG-----------------------GGTGAAC--------------CTT----------------CTAACTAA--CT-TTT-TCTATTCAGATCTCTCCCTT
droTak1 scf7180000415352:403940-404096 - TGCTCGGGCCGCGTCTACTACGATCTGACCAAGACGCGTACGGAAAAGAAGCTGGAGAGCGACGTCGCCATCGTGCGCGTGGAGCAGGTGAATCTAC--ATT-------AAATAATT-CTTTTG-----------------------GGAGCAT--------------CTT----------------CTAACCCA--TG-TTT-TATGTGCAGATCTCTCCCTT
droEug1 scf7180000409711:380879-381036 - TGCTCGGGCCGCGTCTACTACGATCTGACCAAGACGCGTACGGAAAAGAAGCTGGAGAGCGACATCGCCATTGTGCGTGTGGAGCAGGTTAGTGAAC--TTA-------TAATTTTT-TCTCTA-----------------------GAATCAT--------------CTG----------------CTAACTTGTATT--TC-CCTTTTTAGATCTCTCCTTT
dm3 chr3L:16957778-16957934 + TGCTCGGGCCGCGTCTACTACGATTTGACCAAGACACGTAGGGAAAAGCAGCTGGAGGGCGAAATCGCCATTGTGCGCGTGGAGCAGGTGAGTCCCC--ATA-------AAAATATT-TATATT-----------------------GGTCGAT--------------CTG----------------CTAAAGTA--TT-TTG-TATGTTCAGATCTCTCCCTT
droSim2 3l:16540373-16540529 + TGCTCGGGCCGCGTCTACTACGATTTGACCAAGACACGTAGGGAAAAGCAGCTGGAGGGCGAAATCGCCATTGTGCGCGTGGAGCAGGTGAGTCCCC--ATA-------TGAATATT-TAAATT-----------------------GGACCAT--------------CTG----------------CTAACGTA--TT-TTG-TATGTTCAGATCTCTCCCTT
droSec2 scaffold_0:9019211-9019367 + TGCTCGGGCCGCGTCTACTACGATTTGACCAAGACACGTAGGGAAAAGCAGCTGGAGGGCGAAATCGCCATTGTGCGCGTGGAGCAGGTGAGTCCCC--ATA-------TACATATT-TATGTT-----------------------GATTCAT--------------CTG----------------CTAACGTA--TT-TTG-TATGTTCAGATCTCTCCCTT
droYak3 3L:17117441-17117597 - TGCTCGGGCCGCGTCTACTACGATTTGACCAAGACGCGTAAGGAAAAGCAGCTGGAGAGCGACATCGCCATCGTGCGCGTCGAGCAGGTGAGTCCAC--ATG-------GAAATATT-TATGTT-----------------------GTTCCAT--------------CTG----------------CTAACGTG--TT-TTG-TATGTTCAGATCTCTCCCTT
droEre2 scaffold_4784:16884944-16885100 - TGCTCGGGTCGCGTCTACTACGATTTGACCAAGACGCGTAAGGAAAAGCAGCTGGAGGGCGAAATCGCCATCGTGCGCGTCGAGCAGGCGAGTTCAC--ATG-------AAAATATT-TATGTT-----------------------GTTCCAT--------------CTC----------------CTAACGTA--TT-TTG-TATGTTCAGGTCTCTCCCTT
dp5 XR_group8:4780350-4780515 + TGCTCGGGTCGCGTCTACTACGATCTGACCAAAATGCGTACCGAGAAGCAGCTGGAGAGCGACGTTGCCATTCTGCGTGTGGAGCAGGTGAGTCGTT--GTC-------CCAGCTTG-TCTCTG-----------------------TGAGCAGTGCTAAAGC-----TCG----------------TTCTCCAC--TC-CTC-TCCGTATAGGTCTCGCCCTT
droPer2 scaffold_29:400156-400325 + TGCACTGGCAAGGTCTACTACGACCTTTTCAAGGAGCGCGAGGACCACGAGCAAGACGAAACGGTGGCTCTCGTTCGAATCGAACAGGTACCCTTGA--TCT-------AAATCATC-TCTA--------------------------GTGCAT--------------TTCCTCGGATACAGTGGTGTCTCCGTC--TC-CCC-TTTACTTAGATCTGCCCCTT
droWil2 scf2_1100000004511:1297444-1297612 + TGCACGGGTCGCGTCTACTACGATCTGACCAAGCTCCGTACTGAGAAGCAGTTGGAGAGTGATATTGCCATTGTGCGTGTGGAGCAGGTAAGTCTTG-GATG-------AAGTCAC--------ATTGCCATCCGATTCGA----TTGG-GGCT--------------GTT----------------CTAACACG--TT-TAT-TCTATGCAGATCTCGCCCTT
droVir3 scaffold_13049:10205984-10206141 - TGCACGGGTCGCGTTTACTACGATCTGACCAAGGCGCGTACCGAGAAGCAGTTGGAGAAGGATATTGCCATTGTGCGCGTGGAGCAGGTGCGCCTAT-CATT-------AAGTTATT-CATCAA-----------------------TTTGCAT--------------TTA----------------AATGCATT--TT-TAA-CATTTGCAGGTGTCGCCGTT
droMoj3 scaffold_6680:10591268-10591431 + TGCACAGGTCGTGTCTACTACGACCTGACTAAGACGCGTGCCGAGAAGCAGCTGGAGAAGGACATCGCCATCGTGCGTGTGGAGCAGGTGCGTCTTTGGGTT------------ATT--------GACTT--TATATGCAT-T----TGAA-TT--------------TCA----------------CTAAATTGAGTT-TTCGC-TTCATAGGTGTCACCCTT
droGri2 scaffold_15110:9036460-9036623 + TGCACGGGTCGCGTCTACTACGATCTGACCAAGGCGCGTGCCGACAAGCAACTGCAGAGCGATATTGCCATTGTGCGCGTGGAGCAGGTGCGTCTATTCATT-------AAGAAAT--------TTTGCC--A-------ATCAAAT-------------------TTGTA----------------CTAAATTAAGTTGTGG-CATTTGTAGGTATCGCCCTT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droAna3
TGCACGGGCCGTGTCTACTACGATCTGACCAAGACTCGTACCGAGAAGCAGCTGGAGAGCGACATCGCCATTGTGCGCGTGGAGCAGGTGAGCCGAAGTTGTTTGGAGC---------------TGAGTT--T-------ATGAGCT-------------------TTGAG----------------CTGAATCT--CC-TTTGG-TTCTTAGGTATCGCCCTTSizeHit CountTotal NormTotalM044

Female-body		M058

Embryo		V039

Embryo		V055

Head		V105

Male-body		V106

Head
.......................................................................................GTGAGCCGAAGTTGTTTGGAGC---------------T...................................................................................................2318347.0083473567612548463007
.......................................................................................GTGAGCCGAAGTTGTTTGGAG....................................................................................................................2112658.0026581151315213091078
.......................................................................................GTGAGCCGAAGTTGTTTGGAGC---------------....................................................................................................2212295.00229520782931216769
.......................................................................................GTGAGCCGAAGTTGTTTGG......................................................................................................................1912230.002230156001038641107
.......................................................................................GTGAGCCGAAGTTGTTTGGA.....................................................................................................................2011771.0017711031065993609
.......................................................................................GTGAGCCGAAGTTGTTTGGAGC---------------TT..................................................................................................241308.003081710619193
.......................................................................................GTGAGCCGAAGTTGTTTGGAGT---------------....................................................................................................221124.00124120076144
.......................................................................................GTGAGCCGAAGTTGTTTGGAGC---------------TTT.................................................................................................25154.005420042721
.......................................................................................GTGAGCCGAAGTTGTTTG.......................................................................................................................18150.005015007721
.......................................................................................GTGAGCCGAAGTTGTTTGGAGA---------------....................................................................................................22146.004601041922
.......................................................................................GTGAGCCGAAGTTGTTTGGAT....................................................................................................................21136.003600011619
.......................................................................................GTGAGCCGAAGTTGTTTGGAA....................................................................................................................21133.003310221711
.......................................................................................GTGAGCCGAAGTTGTTTGT......................................................................................................................19128.00281000522
........................................................................................TGAGCCGAAGTTGTTTGGAGC---------------T...................................................................................................22120.00201810001
........................................................................................TGAGCCGAAGTTGTTTGGAGC---------------....................................................................................................21115.00151500000
.......................................................................................GTGAGCCGAAGTTGTTTGGAGC---------------G...................................................................................................23115.0015000087
.......................................................................................GTGAGCCGAAGTTGTTTGGAGC---------------TA..................................................................................................24113.0013000238
........................................................................................TGAGCCGAAGTTGTTTGG......................................................................................................................18113.00131300000
.......................................................................................GTGAGCCGAAGTTGTTTGGAGC---------------C...................................................................................................23113.00130100102
.......................................................................................GTGAGCCGAAGTTGTTTGGAGC---------------A...................................................................................................23112.00120000210
.......................................................................................GTGAGCCGAAGTTGTTTGGTT....................................................................................................................2119.009000054
.......................................................................................GTGAGCCGAAGTTGTTTGGT.....................................................................................................................2019.009000135
.......................................................................................GTGAGCCGAAGTTGTTTGGAGC---------------TG..................................................................................................2418.008000053
.......................................................................................GTGAGCCGAAGTTGTTTGGAC....................................................................................................................2118.008000134
...............................................GCAGCTGGAGAGCGACATC..............................................................................................................................................................1917.007520000
................................................................TCGCCATTGTGCGCGTGGAGCA..........................................................................................................................................2217.007600001
........................................................................................TGAGCCGAAGTTGTTTGGAG....................................................................................................................2016.006600000
.......................................................................................GTGAGCCGAAGTTGTTTGGAAA---------------....................................................................................................2215.005000032
.......................................................................................GTGAGCCGAAGTTGTTTT.......................................................................................................................1824.509000009
........................................................................................TGAGCCGAAGTTGTTTGGA.....................................................................................................................1914.004400000
.....................GATCTGACCAAGACTCGTACC......................................................................................................................................................................................2114.004310000
...............................................................ATCGCCATTGTGCGCGTGGAGC...........................................................................................................................................2214.004121000
................................................................TCGCCATTGTGCGCGTGGAGC...........................................................................................................................................2113.003300000
..........................................GAGAAGCAGCTGGAGAGCGACA................................................................................................................................................................2213.003300000
............................................GAAGCAGCTGGAGAGCGACATC..............................................................................................................................................................2213.003210000
.............................CAAGACTCGTACCGAGAAGC...............................................................................................................................................................................2013.003201000
.............................................AAGCAGCTGGAGAGCGACATCGCC...........................................................................................................................................................2413.003110010
...........................ACCAAGACTCGTACCGAGA..................................................................................................................................................................................1913.003200001
.......................................................................................GTGAGCCGAAGTTGTTTGGAGT---------------A...................................................................................................2313.003100011
..................................................................GCCATTGTGCGCGTGGAGCA..........................................................................................................................................2013.003300000
.......................................................................................GTGAGCCGAAGTTGTTTGGAGC---------------TTG.................................................................................................2513.003000021
.......................................................................................GTGAGCCGAAGTTGTTTGGACT---------------....................................................................................................2213.003000111
................................................................TCGCCATTGTGCGCGTGGAGCAGGTATC....................................................................................................................................2813.003200010
....................................CGTACCGAGAAGCAGCTGGA........................................................................................................................................................................2013.003110001
..............CTACTACGATCTGACCAAGACTCG..........................................................................................................................................................................................2412.002000020
......................ATCTGACCAAGACTCGTACC......................................................................................................................................................................................2012.002110000
.............................................AAGCAGCTGGAGAGCGACATCGCCA..........................................................................................................................................................2512.002000002
......................ATCTGACCAAGACTCGTACCGAGAA.................................................................................................................................................................................2512.002020000
.........................................................................................GAGCCGAAGTTGTTTGGAGC---------------T...................................................................................................2112.002000011
.......................................................................................GTGAGCCGAAGTTGTTTGGAAT---------------....................................................................................................2212.002000020
.......................................................................................GTGAGCCGAAGTTGTTTGGCT....................................................................................................................2112.002000200
.................................................................CGCCATTGTGCGCGTGGAGCAGGTA......................................................................................................................................2512.002200000
.......................................................................................GTGAGCCGAAGTTGTTTGA......................................................................................................................1912.002000011
.........................TGACCAAGACTCGTACCGAGAAGC...............................................................................................................................................................................2412.002010100
....................................................TGGAGAGCGACATCGCCATTGTGCGCG.................................................................................................................................................2712.002200000
.......................................................................................GTGAGCCGAAGTTGTTTGGAGC---------------TAT.................................................................................................2512.002000011
..................................................................GCCATTGTGCGCGTGGAGCAGGTA......................................................................................................................................2412.002200000
...............................AGACTCGTACCGAGAAGCAGCTGGA........................................................................................................................................................................2512.002100010
............................................GAAGCAGCTGGAGAGCGACA................................................................................................................................................................2012.002100010
.......................................................................................GTGAGCCGAAGTTGTTTGGAGA---------------A...................................................................................................2312.002000011
.....................GATCTGACCAAGACTCGTACCGAGAAGC...............................................................................................................................................................................2812.002200000
.....................................GTACCGAGAAGCAGCTGGA........................................................................................................................................................................1912.002001010
.....................GATCTGACCAAGACTCGTACCGAGAA.................................................................................................................................................................................2612.002200000
.GCACGGGCCGTGTCTACTACGATC.......................................................................................................................................................................................................2412.002100010
.........................TGACCAAGACTCGTACCGA....................................................................................................................................................................................1912.002200000
...............................................GCAGCTGGAGAGCGACATCGCCATTG.......................................................................................................................................................2612.002000002
.......................................................................................GTGAGCCGAAGTTGTTTGGAGC---------------TGA.................................................................................................2512.002000020
..........................GACCAAGACTCGTACCGAG...................................................................................................................................................................................1912.002100010
................................GACTCGTACCGAGAAGCAGCTGGAGA......................................................................................................................................................................2612.002100010
.................................................................CGCCATTGTGCGCGTGGAGCAGGT.......................................................................................................................................2412.002200000
.......................................................................................GTGAGCCGAAGTTGTTTGTG.....................................................................................................................2012.002000002
droBip1
TGCACGGGCCGTGTCTACTACGATCTGACCAAGACTCGTACCGAGAAGCAACTGGAGAGCGACATCGCCATTGTGCGAGTGGAGCAGGTAAGCCGATGCTGTTTGGAAT---------------TATCTT--T-------TTTTATT-------------------GCTCA----------------CTGAATCA--TC-TTTGT-TTCTTAGGTCTCGCCCTTSizeHit CountTotal NormTotal
No Reads
droKik1
TGCACGGGTCGCGTCTACTACGACCTGACCAAGACGCGTGCCGACAAGAAGCTGGAGAACGAGGTGGCCATTGTGCGTGTGGAGCAGGTAGGGATT-----C-------AACTTTTTCCTTGAG-----------------------AATGAA--------GTATGCTTTA----------------CTAATTAT--TC-ATTTT-CCCTTAGATTTCGCCCTTSizeHit CountTotal NormTotal
No Reads
droFic1
TGCTCGGGCCGCGTCTACTACGATCTGACCAAGACGCGTGCGGAAAAGAAGCTGGAGAGCGAGATCGCCATTGTGCGCGTGGAGCAGGTGAGTCCTT--ATG-------GCTTTTAA-ACTCTT----------TA-----------AAAATAT--------------TTA----------------CTAATCAATGCT-TGG---TATGCAGATCTCTCCCTTSizeHit CountTotal NormTotal
No Reads
droEle1
TGCTCGGGCCGCGTCTACTACGATCTGACCAAGACGCGCGCGGAAAAGAAGCTGGAGAGCGACATCGCCATTGTGCGCGTGGAGCAGGTGAGTCTTT--CTG-------GCTTTATT-TCTCTA---------------------CTGG-ACAT--------------CTA----------------CTAACTTATATT-TTG-TA-CCCCAGATCTCTCCCTTSizeHit CountTotal NormTotal
No Reads
droRho1
TGCTCGGGCCGCGTCTACTACGATCTGACCAAGACGCGTACGGAAAAGAAGTTGGAGAGCGACATCGCCATTGTGCGCGTGGAGCAGGTGAGTCTAG--TTT-------ACTGTTTT-TGCTTA-----------------------GGAACAT--------------CTG----------------CTAACTAACATG-TTG-TA-TCCCAGGTGTCTCCCTTSizeHit CountTotal NormTotal
No Reads
droBia1
TGCTCAGGACGCGTCTACTACGATCTGACCAAGGCGCGTGCGGAAAAGAAGCTGGAGAACGACATCGCCATCGTGCGCGTGGAGCAGGTGAGTCTCT--ATT-------GAATCATT-ACTGTG-----------------------GGTGAAC--------------CTT----------------CTAACTAA--CT-TTT-TCTATTCAGATCTCTCCCTTSizeHit CountTotal NormTotal
No Reads
droTak1
TGCTCGGGCCGCGTCTACTACGATCTGACCAAGACGCGTACGGAAAAGAAGCTGGAGAGCGACGTCGCCATCGTGCGCGTGGAGCAGGTGAATCTAC--ATT-------AAATAATT-CTTTTG-----------------------GGAGCAT--------------CTT----------------CTAACCCA--TG-TTT-TATGTGCAGATCTCTCCCTTSizeHit CountTotal NormTotal
No Reads
droEug1
TGCTCGGGCCGCGTCTACTACGATCTGACCAAGACGCGTACGGAAAAGAAGCTGGAGAGCGACATCGCCATTGTGCGTGTGGAGCAGGTTAGTGAAC--TTA-------TAATTTTT-TCTCTA-----------------------GAATCAT--------------CTG----------------CTAACTTGTATT--TC-CCTTTTTAGATCTCTCCTTTSizeHit CountTotal NormTotal
No Reads
dm3
TGCTCGGGCCGCGTCTACTACGATTTGACCAAGACACGTAGGGAAAAGCAGCTGGAGGGCGAAATCGCCATTGTGCGCGTGGAGCAGGTGAGTCCCC--ATA-------AAAATATT-TATATT-----------------------GGTCGAT--------------CTG----------------CTAAAGTA--TT-TTG-TATGTTCAGATCTCTCCCTTSizeHit CountTotal NormTotalGSM154618

Ovary		GSM154620

Ovary		GSM154621

Ovary		GSM154622

Ovary		GSM180328

Head		GSM180329

Mixed-body		GSM180330

Embryo		GSM180331

Embryo		GSM180332

Embryo		GSM180333

Embryo		GSM180334

Larvae		GSM180335

Disc		GSM180336

Pupae		GSM180337

S2		GSM239041

Head		GSM239050

Head		GSM239051

S2		GSM239052

S2		GSM246084

Head		GSM266765

S2		GSM280082

Ovary		GSM280083

Ovary		GSM280084

Ovary		GSM280085

Testis		GSM280086

Ovary		GSM280087

S2-NP		GSM280088

S2-NP		GSM312995

Head		GSM313160

Head		GSM313161

Head		GSM313162

Head		GSM313163

Head		GSM313164

Head		GSM313165

Head		GSM343287

Embryo		GSM379050

Ovary		GSM379051

Ovary		GSM379052

Ovary		GSM379053

Ovary		GSM379054

Ovary		GSM379055

Ovary		GSM379056

Ovary		GSM379057

Ovary		GSM379058

Ovary		GSM379059

Ovary		GSM379060

Ovary		GSM379061

Ovary		GSM379062

Ovary		GSM379063

Ovary		GSM379064

Ovary		GSM379065

Ovary		GSM379066

Ovary		GSM379067

Ovary		GSM424739

S2		GSM424740

S2		GSM424741

S2		GSM467729

Female-body		GSM467730

Female-body		GSM467731

Female-body		M002

CS		M003

Male-body		M004

Male-body		M005

ML-DmD32		M006

ML-DmD32		M029

OSC		M030

OSC		M031

OSC		M032

S2-R+		M033

S2-R+		M034

S2-R+		M035

S2-R+		M036

S2-R+		M037

S2-R+		M038

S2-R+		M039

S2-R+		M048

S2-R+		OSS2

OSS		OSS6

OSS		OSS7

OSS		OSS8

OSS		S1

Head		S10

Embryo		S11

Embryo		S12

Embryo		S13

Embryo		S14

Embryo		S15

S2-GMR		S16

Kc		S17

Larvae		S18

Larvae		S19

Pupae		S2

Head		S20

Pupae		S21

Disc		S22

Head		S23

Female-body		S24

Male-body		S25

Larvae		S26

Larvae		S27

Pupae		S28

Pupae		S29

Head		S3

Male-body		S30

S2-GMR		S31

S2		S32

S2		S33

Kc		S34

Kc		S35

Kc		S4

Female-body		S5

Disc		S6

Embryo		S7

Embryo		S8

S2		S9

Embryo		SRR001337

Head		SRR001338

Head		SRR001339

Head		SRR001340

Head		SRR001341

Head		SRR001342

Head		SRR001343

Head		SRR001344

Head		SRR001345

Head		SRR001346

Head		SRR001347

Head		SRR001348

Head		SRR001349

Head		SRR001664

Head		SRR010951

Ovary		SRR010952

Ovary		SRR010953

Ovary		SRR010954

Ovary		SRR010955

Ovary		SRR010956

Ovary		SRR010957

Ovary		SRR010958

Ovary		SRR010959

Ovary		SRR010960

Ovary		SRR014268

Embryo		SRR014269

Embryo		SRR014270

Embryo		SRR014271

Embryo		SRR014272

Embryo		SRR014273

Ovary		SRR014274

Ovary		SRR014275

Ovary		SRR014276

Ovary		SRR014277

Ovary		SRR014278

Ovary		SRR014279

Ovary		SRR014280

Ovary		SRR014281

Ovary		SRR014282

Ovary		SRR023197

S2		SRR023399

S2		SRR023400

S2		SRR023402

S2		SRR023407

S2		SRR029028

S2		SRR029029

S2		SRR029030

S2		SRR029031

S2		SRR029032

S2		SRR029033

S2		SRR029608

Head		SRR029633

Head		SRR030145

gb3		SRR031692

Head		SRR031693

Head		SRR031694

Head		SRR031696

Head		SRR031697

Head		SRR031698

Head		SRR031699

Head		SRR031700

Head		SRR031701

Head		SRR031702

Head		SRR031703

Head		SRR031704

Head		SRR032092

S2		SRR032093

S2		SRR032094

S2		SRR032095

S2-NP		SRR032096

S2-NP		SRR032152

Head		SRR060643

Testis		SRR060644

Ovary		SRR060645

Testis		SRR060646

Ovary		SRR060647

Ovary		SRR060648

Ovary		SRR060649

Ovary		SRR060650

Testis		SRR060651

Ovary		SRR060652

Testis		SRR060653

Ovary		SRR065151

Ovary		SRR065152

Ovary		SRR065153

Ovary		SRR065154

Ovary		SRR065155

Ovary		SRR065800

Ovary		SRR065801

Ovary		SRR065802

Ovary		SRR065803

Ovary		SRR065804

Ovary		SRR065805

Ovary		SRR065806

Ovary		SRR065807

Ovary		SRR097865

S2-NP		SRR097866

S2-NP		SRR097867

S2-NP		SRR298536

Ovary		SRR298537

Ovary		SRR298711

Ovary		SRR298712

Ovary		SRR317110

Ovary		SRR317111

Ovary		SRR317112

Ovary		SRR317113

Ovary		SRR317114

Ovary		SRR317115

Ovary		SRR317116

Ovary		SRR317117

Ovary		SRR341115

S2		SRR341116

S2		SRR341117

S2		SRR341118

S2		SRR351332

Mixed-body		SRR351333

Mixed-body		T004

OSC		T005

CME-L1		V001

Embryo		V002

Embryo		V003

S2		V006

Female-body		V007

Head		V008

S2		V009

CME-L1		V010

ML-DmD20-C5		V011

Sg4		V012

Male-body		V013

Head		V014

DTT		V015

DreRFHV		V018

Kc167		V019

GM2		V020

S2-R+		V021

ML-DmD21		V022

ML-DmD32		V023

Head		V024

Kc167		V025

S2-R+		V026

1182-2H		V027

ML-DmD21		V028

CME-W1-Cl.8+		V029

ML-DmD9		V030

ML-DmD8		V031

GM2		V032

S1		V033

CME-W1-Cl.8+		V034

ML-DmD16-C3		V035

ML-DmD32		V036

ML-DmD20-C5		V037

S2		V038

S2		V063

Ovary		V0632

Ovary		V064

Ovary		V0642

Ovary		V065

Ovary		V0652

Ovary		V066

Ovary		V0662

Ovary		V067

S2-NP		V073

mbn2		V074

S3		V075

ML-DmBG1-C1		V076

ML-DmBG3-C2		V077

Head		V078

Head		V079

Head		V080

Head		V081

Embryo		V082

Embryo		V083

Male-body		V084

Female-body		V085

CME-W2		V086

Female-body		V088

Ovary		V0882

Ovary		V089

Ovary		V0892

Ovary		V090

Male-body		V091

fGS/OSS		V092

Male-body		V093

Male-body		V094

S2-R+		V095

S2-R+		V096

Ovary		V097

Ovary		V098

Ovary		V125

ML-DmD9		V126

CME-L1		V127

G2		V128

S3		V129

ML-DmBG1-C1		V130

ML-DmBG3-C2		V131

ML-DmD16-C3		V132

ML-DmD32		V133

Sg4		V134

ML-DmD8		V135

CME-W2		V136

Male-body		V137

Head		V138

Male-body		V139

Female-body		V140

Female-body		V141

Female-body		V142

Female-body		V144

OSC		V145

S2		V146

S1		V147

1182-2H		V148

mbn2		GSM1528798

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.............................CAAGACACGTAGGGAAAAG................................................................................................................................................................................1911.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................ATTGTGCGCGTGGAGCAGGTC......................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
.......................TTTGACCAAGACACGTAGGGAAAAGCA..............................................................................................................................................................................2711.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................AGACACGTAGGGAAAAGCAG.............................................................................................................................................................................2011.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........CGCGTCTACTACGATTTGACCAAG...............................................................................................................................................................................................2411.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................CGCCATTGTGCGCGTGGAGC...........................................................................................................................................2011.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................GACCAAGACACGTAGGGAAAAGCAGC............................................................................................................................................................................2611.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
.GCTCGGGCCGCGTCTACTACGA.........................................................................................................................................................................................................2211.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................CCAAGACACGTAGGGAAAAGCAGCTGG.........................................................................................................................................................................2711.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...TCGGGCCGCGTCTACTACGATTTGACCA.................................................................................................................................................................................................2811.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................AAGACACGTAGGGAAAAG................................................................................................................................................................................1811.001000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................CACGTAGGGAAAAGCAGCTGGAGGGCG...................................................................................................................................................................2711.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000
...................................ACGTAGGGAAAAGCAGCTGGAGGG.....................................................................................................................................................................2411.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
.......................TTTGACCAAGACACGTAGG......................................................................................................................................................................................1911.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................ACGTAGGGAAAAGCAGCTGGAGGGC....................................................................................................................................................................2511.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
..........................GACCAAGACACGTAGGGAA...................................................................................................................................................................................1911.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................ATATT-----------------------GGTCGAT--------------CTG----------------CTAAAGTA--T..........................2411.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
....CGGGCCGCGTCTACTACGATTTGACCA.................................................................................................................................................................................................2711.001000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................CTGGAGGGCGAAATCGCCATTGTGC....................................................................................................................................................2511.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
............GTCTACTACGATTTGACCAAGACACGT.........................................................................................................................................................................................2711.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
........................TTGACCAAGACACGTAGGGAA...................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
..........................................................................................................................................................................G----------------CTAAAGTA--TT-TTG-TATGTTCAG...........2311.001000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........GCGTCTACTACGATTTGACCA.................................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......GCCGCGTCTACTACGATTTGACCA.................................................................................................................................................................................................2411.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................GACACGTAGGGAAAAGCAGCTG..........................................................................................................................................................................2211.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
.................................................AGCTGGAGGGCGAAATCGCCATTGT......................................................................................................................................................2511.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................ATTTGACCAAGACACGTAGGG.....................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
......................................................GAGGGCGAAATCGCCATTGTGCGCGT................................................................................................................................................2611.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................TACGATTTGACCAAGACACGTA........................................................................................................................................................................................2211.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................CAGCTGGAGGGCGAAATCGC............................................................................................................................................................2011.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
...........................ACCAAGACACGTAGGGAAAAG................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................CAGCTGGAGGGCGAAATCGCC...........................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................GCCATTGTGCGCGTGGAGC...........................................................................................................................................1911.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................AATCGCCATTGTGCGCGTGGAG............................................................................................................................................2211.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................GGCGAAATCGCCATTGTGCGCGTGGAGC...........................................................................................................................................2811.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..........................GACCAAGACACGTAGGGAAAAGCA..............................................................................................................................................................................2411.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
................ACTACGATTTGACCAAGACACG..........................................................................................................................................................................................2211.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................AAGCAGCTGGAGGGCGAAATCGC............................................................................................................................................................2311.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
.........................................GGAAAAGCAGCTGGAGGGCGA..................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................CACGTAGGGAAAAGCAGCTGGAGG......................................................................................................................................................................2411.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
.............................................................AAATCGCCATTGTGCGCGTGG..............................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................GATTTGACCAAGACACGTAGGGAAAA.................................................................................................................................................................................2611.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
...........................................AAAAGCAGCTGGAGGGCGAAATCGC............................................................................................................................................................2511.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................ATTTGACCAAGACACGTAGGGAAAA.................................................................................................................................................................................2511.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
......................................TAGGGAAAAGCAGCTGGAGGGCG...................................................................................................................................................................2311.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................CTG----------------CTAAAGTA--TT-TTG-TATGT...............2111.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................ATTGTGCGCGTGGAGCAG.........................................................................................................................................1811.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................ACGATTTGACCAAGACACGTAGGGT....................................................................................................................................................................................2511.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
....................CGATTTGACCAAGACACGTAGGGAA...................................................................................................................................................................................2511.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................ACGATTTGACCAAGACACGTA........................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................CGATTTGACCAAGACACGTAGGG.....................................................................................................................................................................................2311.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..............................................................AATCGCCATTGTGCGCGTGGAGCA..........................................................................................................................................2411.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
.............................CAAGACACGTAGGGAAAAGCA..............................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.GCTCGGGCCGCGTCTACTACG..........................................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................CATTGTGCGCGTGGAGCAGA........................................................................................................................................2011.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................ACGATTTGACCAAGACACGTAGGGG....................................................................................................................................................................................2511.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......GGCCGCGTCTACTACGATTTGACCA.................................................................................................................................................................................................2511.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................TGACCAAGACACGTAGGGAAAAGCAGC............................................................................................................................................................................2711.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................TGACCAAGACACGTAGGGAAAAGCA..............................................................................................................................................................................2511.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................AAGACACGTAGGGAAAAGCAGCTGGAGG......................................................................................................................................................................2811.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................AAGCAGCTGGAGGGCGAA.................................................................................................................................................................1811.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................AAGCAGCTGGAGGGCGAAATCGCC...........................................................................................................................................................2411.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................AGTA--TT-TTG-TATGTTCAG...........1811.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................GATTTGACCAAGACACGTAGGG.....................................................................................................................................................................................2211.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................GGGCGAAATCGCCATTGTGCGCGTG...............................................................................................................................................2511.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........GCGTCTACTACGATTTGACCAAGACACGTA........................................................................................................................................................................................3011.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................AAAGCAGCTGGAGGGCGAAATC..............................................................................................................................................................2211.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
droSim2
TGCTCGGGCCGCGTCTACTACGATTTGACCAAGACACGTAGGGAAAAGCAGCTGGAGGGCGAAATCGCCATTGTGCGCGTGGAGCAGGTGAGTCCCC--ATA-------TGAATATT-TAAATT-----------------------GGACCAT--------------CTG----------------CTAACGTA--TT-TTG-TATGTTCAGATCTCTCCCTTSizeHit CountTotal NormTotalM023

Head		M024

Male-body		M025

Embryo		M053

Female-body		O001

Testis		O002

Head		SRR553485

Ovary		SRR553486

Ovary		SRR553487

Ovary		SRR553488

Ovary		SRR618934

Ovary		V044

Embryo		SRR902008

Ovary		SRR902009

Testis		SRR1275487

Male larvae		SRR1275485

Male prepupae		SRR1275483

Male prepupae
...............................AGACACGTAGGGAAAAGCAGC............................................................................................................................................................................2111.00101000000000000000
........................................GGGAAAAGCAGCTGGAGGGC....................................................................................................................................................................2011.00100010000000000000
................................GACACGTAGGGAAAAGCAGCTGG.........................................................................................................................................................................2311.00100000000000100000
..CTCGGGCCGCGTCTACTACGATTTG.....................................................................................................................................................................................................2511.00100000000000001000
.........................................................................................................................ATT-----------------------GGACCAT--------------CTG----------------CTAACGT..............................2011.00100100000000000000
...TCGGGCCGCGTCTACTACGATTT......................................................................................................................................................................................................2311.00100000000000100000
........................TTGACCAAGACACGTAGGGAAAAGCAGC............................................................................................................................................................................2811.00100000010000000000
......GGCCGCGTCTACTACGATTTGACC..................................................................................................................................................................................................2411.00110000000000000000
.............................CAAGACACGTAGGGAAAAGCAGC............................................................................................................................................................................2311.00110000000000000000
.......................TTTGACCAAGACACGTAGGGAAAAGCA..............................................................................................................................................................................2711.00100010000000000000
....CGGGCCGCGTCTACTACG..........................................................................................................................................................................................................1811.00100001000000000000
droSec2
TGCTCGGGCCGCGTCTACTACGATTTGACCAAGACACGTAGGGAAAAGCAGCTGGAGGGCGAAATCGCCATTGTGCGCGTGGAGCAGGTGAGTCCCC--ATA-------TACATATT-TATGTT-----------------------GATTCAT--------------CTG----------------CTAACGTA--TT-TTG-TATGTTCAGATCTCTCCCTTSizeHit CountTotal NormTotalM054

Female-body		V113

Male-body		V114

Embryo		V115

Head
...............................................................ATCGCCATTGTGCGCGTGGAGCA..........................................................................................................................................2312.0020110
................................GACACGTAGGGAAAAGCAGCTGGAGGGC....................................................................................................................................................................2812.0020200
.................................ACACGTAGGGAAAAGCAGCTGGAGGGC....................................................................................................................................................................2712.0020200
..............CTACTACGATTTGACCAAG...............................................................................................................................................................................................1912.0020020
..........................................GAAAAGCAGCTGGAGGGC....................................................................................................................................................................1811.0010010
.....................................................................ATTGTGCGCGTGGAGCAG.........................................................................................................................................1811.0010010
..................................CACGTAGGGAAAAGCAGCTGGAGG......................................................................................................................................................................2411.0010100
..........................GACCAAGACACGTAGGGAAAAGC...............................................................................................................................................................................2311.0010010
....................CGATTTGACCAAGACACGTAGG......................................................................................................................................................................................2211.0010010
..........................................GAAAAGCAGCTGGAGGGCGAA.................................................................................................................................................................2111.0010001
.....................GATTTGACCAAGACACGTAGG......................................................................................................................................................................................2111.0010010
..............CTACTACGATTTGACCAA................................................................................................................................................................................................1811.0010010
..................................................................GCCATTGTGCGCGTGGAGCAGGTATC....................................................................................................................................2611.0010100
.................................................AGCTGGAGGGCGAAATCGCCATT........................................................................................................................................................2311.0010100
.................................................................CGCCATTGTGCGCGTGGAGCA..........................................................................................................................................2111.0011000
.................................ACACGTAGGGAAAAGCAGCTGGAGGGCG...................................................................................................................................................................2811.0010100
....................CGATTTGACCAAGACACGTAGGGA....................................................................................................................................................................................2411.0011000
...............................AGACACGTAGGGAAAAGCAGC............................................................................................................................................................................2111.0010001
......................ATTTGACCAAGACACGTAGGGAAAAGCA..............................................................................................................................................................................2811.0011000
.................................................................CGCCATTGTGCGCGTGGAGCAG.........................................................................................................................................2211.0011000
...............................AGACACGTAGGGAAAAGCAGCT...........................................................................................................................................................................2211.0010100
...............................AGACACGTAGGGAAAAGCAGCTGGA........................................................................................................................................................................2511.0011000
.........................................................GGCGAAATCGCCATTGTGCGCGTGGAG............................................................................................................................................2711.0010100
................................GACACGTAGGGAAAAGCAGCTGGA........................................................................................................................................................................2411.0011000
...........................................AAAAGCAGCTGGAGGGCGA..................................................................................................................................................................1911.0010010
..................................................GCTGGAGGGCGAAATCGCCA..........................................................................................................................................................2011.0011000
..................................................GCTGGAGGGCGAAATCGCCATTGTGCGC..................................................................................................................................................2811.0010010
..............................AAGACACGTAGGGAAAAGCA..............................................................................................................................................................................2011.0010100
....................CGATTTGACCAAGACACGTAGGG.....................................................................................................................................................................................2311.0010010
............................................AAAGCAGCTGGAGGGCGAAATCG.............................................................................................................................................................2311.0010100
.............................................................AAATCGCCATTGTGCGCGTGGAGC...........................................................................................................................................2411.0011000
..................................................................GCCATTGTGCGCGTGGAGCA..........................................................................................................................................2011.0010100
.GCTCGGGCCGCGTCTACTACGATTTGACC..................................................................................................................................................................................................2911.0010100
...................................................CTGGAGGGCGAAATCGCCATTGTGCGC..................................................................................................................................................2711.0010010
..............................................AGCAGCTGGAGGGCGAAATCGCCA..........................................................................................................................................................2411.0010100
..............................AAGACACGTAGGGAAAAGCAGCTG..........................................................................................................................................................................2411.0011000
..................................................................GCCATTGTGCGCGTGGAGCAGA........................................................................................................................................2211.0010100
.....................GATTTGACCAAGACACGTAGGGA....................................................................................................................................................................................2311.0010010
...................ACGATTTGACCAAGACACGT.........................................................................................................................................................................................2011.0011000
..........................GACCAAGACACGTAGGGAAAAGCAGCT...........................................................................................................................................................................2711.0010100
................................................................TCGCCATTGTGCGCGTGGAGCA..........................................................................................................................................2211.0010100
...............................AGACACGTAGGGAAAAGCAGCTGG.........................................................................................................................................................................2411.0010100
.............................................AAGCAGCTGGAGGGCGAAATC..............................................................................................................................................................2111.0010100
....................................................................CATTGTGCGCGTGGAGCAG.........................................................................................................................................1911.0010010
..................................................GCTGGAGGGCGAAATCGCCATTG.......................................................................................................................................................2311.0010100
........................................................GGGCGAAATCGCCATTGTGCGCGTGGAGC...........................................................................................................................................2911.0010010
droYak3
TGCTCGGGCCGCGTCTACTACGATTTGACCAAGACGCGTAAGGAAAAGCAGCTGGAGAGCGACATCGCCATCGTGCGCGTCGAGCAGGTGAGTCCAC--ATG-------GAAATATT-TATGTT-----------------------GTTCCAT--------------CTG----------------CTAACGTG--TT-TTG-TATGTTCAGATCTCTCCCTTSizeHit CountTotal NormTotalM026

Head		M043

Female-body		M056

Embryo		V046

Embryo		V052

Head		V058

Head		V120

Male-body		SRR1275488

Male larvae		SRR1275486

Male prepupae		SRR1275484

Male prepupae		GSM1528802

follicle cells
............................................AAAGCAGCTGGAGAGCGACA................................................................................................................................................................2013.00300000030000
...........................................................CGACATCGCCATCGTGCGCGT................................................................................................................................................2113.00301020000000
..............CTACTACGATTTGACCAAGACGCG..........................................................................................................................................................................................2412.00200010010000
.................................................AGCTGGAGAGCGACATCGCC...........................................................................................................................................................2012.00200000020000
..................................................GCTGGAGAGCGACATCGCCATCGTGCGC..................................................................................................................................................2812.00200000020000
..............CTACTACGATTTGACCAAGACGCGT.........................................................................................................................................................................................2512.00200000020000
...............................AGACGCGTAAGGAAAAGCAGCTGGAGAGC....................................................................................................................................................................2912.00200000020000
..............................................AGCAGCTGGAGAGCGACA................................................................................................................................................................1812.00201000100000
.....................GATTTGACCAAGACGCGTAAGGAA...................................................................................................................................................................................2412.00200000020000
.....................GATTTGACCAAGACGCGTAAGGA....................................................................................................................................................................................2312.00200000020000
...........................................AAAAGCAGCTGGAGAGCGACA................................................................................................................................................................2112.00200000020000
........................................................GAGCGACATCGCCATCGTGCGCGT................................................................................................................................................2412.00200000020000
..........................GACCAAGACGCGTAAGGAAAAGC...............................................................................................................................................................................2312.00200000020000
......................................................................................................................................................CCAT--------------CTG----------------CTAACGTG--TT-TTG-TATG................2412.00200200000000
..............................................AGCAGCTGGAGAGCGACATCGCC...........................................................................................................................................................2311.00100000010000
................................GACGCGTAAGGAAAAGCAGCTGGAG.......................................................................................................................................................................2511.00100000010000
...............................AGACGCGTAAGGAAAAGC...............................................................................................................................................................................1811.00100000010000
..............CTACTACGATTTGACCAAG...............................................................................................................................................................................................1911.00101000000000
...................ACGATTTGACCAAGACGCGT.........................................................................................................................................................................................2011.00100000010000
..............................................................CATCGCCATCGTGCGCGTCGAGCA..........................................................................................................................................2411.00101000000000
...............................................GCAGCTGGAGAGCGACATCGC............................................................................................................................................................2111.00100000010000
........................TTGACCAAGACGCGTAAGGAA...................................................................................................................................................................................2111.00100000010000
.......................................AAGGAAAAGCAGCTGGAGAGCGAC.................................................................................................................................................................2411.00100000100000
................................................................TCGCCATCGTGCGCGTCGA.............................................................................................................................................1911.00101000000000
...................................GCGTAAGGAAAAGCAGCTGGAGA......................................................................................................................................................................2311.00100100000000
.......................................AAGGAAAAGCAGCTGGAGAGC....................................................................................................................................................................2111.00100100000000
.............................................AAGCAGCTGGAGAGCGACATCGCCATC........................................................................................................................................................2711.00100000010000
..................................CGCGTAAGGAAAAGCAGCTGGAGAGCG...................................................................................................................................................................2711.00100000010000
.........................TGACCAAGACGCGTAAGG.....................................................................................................................................................................................1811.00100001000000
................ACTACGATTTGACCAAGACGCGTAAGG.....................................................................................................................................................................................2711.00101000000000
..............................................AGCAGCTGGAGAGCGACATCGC............................................................................................................................................................2211.00100000010000
......................ATTTGACCAAGACGCGTAAGGA....................................................................................................................................................................................2211.00100000010000
..............................................AGCAGCTGGAGAGCGACATCGCCAT.........................................................................................................................................................2511.00100000010000
................ACTACGATTTGACCAAGACGCG..........................................................................................................................................................................................2211.00101000000000
...........................................AAAAGCAGCTGGAGAGCGACAT...............................................................................................................................................................2211.00100000010000
..........................GACCAAGACGCGTAAGGAAA..................................................................................................................................................................................2011.00100000010000
..............................AAGACGCGTAAGGAAAAGCAGCTGGAG.......................................................................................................................................................................2711.00100000010000
.............................................................ACATCGCCATCGTGCGCGTCGAGC...........................................................................................................................................2411.00100000010000
..........................................................GCGACATCGCCATCGTGCGCGT................................................................................................................................................2211.00100001000000
...............TACTACGATTTGACCAAGACGCGT.........................................................................................................................................................................................2411.00100000100000
...............................AGACGCGTAAGGAAAAGCA..............................................................................................................................................................................1911.00100000010000
..........................GACCAAGACGCGTAAGGA....................................................................................................................................................................................1811.00101000000000
..............................................................CATCGCCATCGTGCGCGTCGAG............................................................................................................................................2211.00101000000000
..................................................................GCCATCGTGCGCGTCGAGCA..........................................................................................................................................2011.00101000000000
.......................................AAGGAAAAGCAGCTGGAGAGCGACATC..............................................................................................................................................................2711.00100000010000
..............................................AGCAGCTGGAGAGCGACATCG.............................................................................................................................................................2111.00100000010000
..................................................GCTGGAGAGCGACATCGCCATCGTG.....................................................................................................................................................2511.00100000010000
.........................................GGAAAAGCAGCTGGAGAG.....................................................................................................................................................................1811.00101000000000
.................................ACGCGTAAGGAAAAGCAGCTGGA........................................................................................................................................................................2311.00100000010000
................ACTACGATTTGACCAAGACGC...........................................................................................................................................................................................2111.00100000010000
............................................AAAGCAGCTGGAGAGCGACAT...............................................................................................................................................................2111.00100000010000
.....................GATTTGACCAAGACGCGTAAGG.....................................................................................................................................................................................2211.00101000000000
.......................................AAGGAAAAGCAGCTGGAGAGCG...................................................................................................................................................................2211.00100000010000
........................TTGACCAAGACGCGTAAGG.....................................................................................................................................................................................1911.00100000010000
...............TACTACGATTTGACCAAGACG............................................................................................................................................................................................2111.00110000000000
.....................................GTAAGGAAAAGCAGCTGGA........................................................................................................................................................................1911.00100000010000
.................CTACGATTTGACCAAGACGCGTAAGGA....................................................................................................................................................................................2711.00101000000000
..............................................AGCAGCTGGAGAGCGACATCGCCATCGT......................................................................................................................................................2811.00100000010000
.....................GATTTGACCAAGACGCGTAAGGAAA..................................................................................................................................................................................2511.00100000010000
.......................TTTGACCAAGACGCGTAAGG.....................................................................................................................................................................................2011.00100000010000
............GTCTACTACGATTTGACCAAGA..............................................................................................................................................................................................2211.00101000000000
..................................................GCTGGAGAGCGACATCGCCATCG.......................................................................................................................................................2311.00100000010000
.......................................AAGGAAAAGCAGCTGGAGAGCGACAT...............................................................................................................................................................2611.00100000010000
..............CTACTACGATTTGACCAAGACGC...........................................................................................................................................................................................2311.00101000000000
...................ACGATTTGACCAAGACGCGTA........................................................................................................................................................................................2111.00100000010000
.......................TTTGACCAAGACGCGTAAGGA....................................................................................................................................................................................2111.00100000010000
...........................................................CGACATCGCCATCGTGCGCGTC...............................................................................................................................................2211.00101000000000
..............................................AGCAGCTGGAGAGCGACATCGCCATCG.......................................................................................................................................................2711.00100000010000
....................CGATTTGACCAAGACGCGTAAGGA....................................................................................................................................................................................2411.00100000010000
...................ACGATTTGACCAAGACGCGTAAGGA....................................................................................................................................................................................2511.00100000010000
.............................................AAGCAGCTGGAGAGCGACATC..............................................................................................................................................................2111.00100000010000
droEre2
TGCTCGGGTCGCGTCTACTACGATTTGACCAAGACGCGTAAGGAAAAGCAGCTGGAGGGCGAAATCGCCATCGTGCGCGTCGAGCAGGCGAGTTCAC--ATG-------AAAATATT-TATGTT-----------------------GTTCCAT--------------CTC----------------CTAACGTA--TT-TTG-TATGTTCAGGTCTCTCCCTTSizeHit CountTotal NormTotalM055

Female-body		M057

Embryo		V060

Head		V040

Embryo		V107

Male-body		V108

Head		GSM1528801

follicle cells
.....................................GTAAGGAAAAGCAGCTGGAGGGC....................................................................................................................................................................23111.00111110620
..............CTACTACGATTTGACCAAGA..............................................................................................................................................................................................2013.0030101010
...............................AGACGCGTAAGGAAAAGCA..............................................................................................................................................................................1913.0031000200
..............................AAGACGCGTAAGGAAAAGC...............................................................................................................................................................................1912.0020000110
..................................................GCTGGAGGGCGAAATCGCCAT.........................................................................................................................................................2112.0021010000
.....................................GTAAGGAAAAGCAGCTGGA........................................................................................................................................................................1912.0020000110
..............CTACTACGATTTGACCAAGACGC...........................................................................................................................................................................................2312.0020000110
.......................TTTGACCAAGACGCGTAAGGAA...................................................................................................................................................................................2212.0022000000
..............................................AGCAGCTGGAGGGCGAAAT...............................................................................................................................................................1912.0020000200
.....................................GTAAGGAAAAGCAGCTGGAGGGCGAA.................................................................................................................................................................2612.0020000110
..........................................GAAAAGCAGCTGGAGGGC....................................................................................................................................................................1812.0020000200
...................ACGATTTGACCAAGACGCGTAAGG.....................................................................................................................................................................................2412.0020000110
................ACTACGATTTGACCAAGACGC...........................................................................................................................................................................................2112.0021000100
............GTCTACTACGATTTGACCAAGACGC...........................................................................................................................................................................................2512.0020000200
..............CTACTACGATTTGACCAAGACGCGT.........................................................................................................................................................................................2512.0021001000
......................ATTTGACCAAGACGCGTAAGGA....................................................................................................................................................................................2211.0010000100
..............CTACTACGATTTGACCAAGAC.............................................................................................................................................................................................2111.0011000000
...............................AGACGCGTAAGGAAAAGCAGCTGGAG.......................................................................................................................................................................2611.0011000000
...............................................GCAGCTGGAGGGCGAAATCGCC...........................................................................................................................................................2211.0010000100
...............................................................ATCGCCATCGTGCGCGTCGAGCA..........................................................................................................................................2311.0010100000
......................ATTTGACCAAGACGCGTAAGGAAAAGCA..............................................................................................................................................................................2811.0011000000
..............................AAGACGCGTAAGGAAAAGCAG.............................................................................................................................................................................2111.0011000000
..........................................GAAAAGCAGCTGGAGGGCGAAATC..............................................................................................................................................................2411.0011000000
................................GACGCGTAAGGAAAAGCAGCTGGA........................................................................................................................................................................2411.0011000000
.............................CAAGACGCGTAAGGAAAAGCA..............................................................................................................................................................................2111.0011000000
........................TTGACCAAGACGCGTAAGGA....................................................................................................................................................................................2011.0011000000
............................................................GAAATCGCCATCGTGCGCGTCGAGC...........................................................................................................................................2511.0010000100
..............CTACTACGATTTGACCAAGACG............................................................................................................................................................................................2211.0010000100
.........................TGACCAAGACGCGTAAGG.....................................................................................................................................................................................1811.0011000000
..................................................................GCCATCGTGCGCGTCGAGCAG.........................................................................................................................................2111.0010000100
.................................................AGCTGGAGGGCGAAATCG.............................................................................................................................................................1811.0010010000
....................................CGTAAGGAAAAGCAGCTGGAGGGC....................................................................................................................................................................2411.0010000100
.........CGCGTCTACTACGATTTGAC...................................................................................................................................................................................................2011.0010000100
..........................................GAAAAGCAGCTGGAGGGCGAAAT...............................................................................................................................................................2311.0010000100
TGCTCGGGTCGCGTCTACTACGATT.......................................................................................................................................................................................................2511.0011000000
.............................................AAGCAGCTGGAGGGCGAAATC..............................................................................................................................................................2111.0011000000
................ACTACGATTTGACCAAGACGCGTAAG......................................................................................................................................................................................2611.0011000000
..........................GACCAAGACGCGTAAGGAA...................................................................................................................................................................................1911.0011000000
...........................................AAAAGCAGCTGGAGGGCGAAA................................................................................................................................................................2111.0011000000
.....................GATTTGACCAAGACGCGTAAGGA....................................................................................................................................................................................2311.0010000100
....................CGATTTGACCAAGACGCGTAAG......................................................................................................................................................................................2211.0010000100
..................................................................GCCATCGTGCGCGTCGAGCAGGTCT.....................................................................................................................................2511.0010000100
............................................AAAGCAGCTGGAGGGCGAA.................................................................................................................................................................1911.0010000100
.........CGCGTCTACTACGATTTGACCAAGA..............................................................................................................................................................................................2511.0010000100
...................................GCGTAAGGAAAAGCAGCTGGAGG......................................................................................................................................................................2311.0011000000
.........................TGACCAAGACGCGTAAGGAA...................................................................................................................................................................................2011.0011000000
.................................................................CGCCATCGTGCGCGTCGAGCA..........................................................................................................................................2111.0011000000
..............................................AGCAGCTGGAGGGCGAAATCGCCA..........................................................................................................................................................2411.0010000100
..........................GACCAAGACGCGTAAGGAAAAGC...............................................................................................................................................................................2311.0010000100
..........................GACCAAGACGCGTAAGGAAA..................................................................................................................................................................................2011.0010000010
......................ATTTGACCAAGACGCGTAAGGAAA..................................................................................................................................................................................2411.0011000000
..............................................................AATCGCCATCGTGCGCGTCGA.............................................................................................................................................2111.0010000010
............................................AAAGCAGCTGGAGGGCGAAATCGCC...........................................................................................................................................................2511.0010000100
..CTCGGGTCGCGTCTACTACGATTTGAC...................................................................................................................................................................................................2711.0010100000
.........CGCGTCTACTACGATTTGACCAAGACG............................................................................................................................................................................................2711.0010000100
TGCTCGGGTCGCGTCTACT.............................................................................................................................................................................................................1911.0011000000
..................................................................GCCATCGTGCGCGTCGAGCA..........................................................................................................................................2011.0011000000
..................................................GCTGGAGGGCGAAATCGCCATC........................................................................................................................................................2211.0011000000
........................................AGGAAAAGCAGCTGGAGGGCGAA.................................................................................................................................................................2311.0011000000
.................................................................CGCCATCGTGCGCGTCGAGCAGGTCT.....................................................................................................................................2611.0010010000
..........................GACCAAGACGCGTAAGGAAAA.................................................................................................................................................................................2111.0010000100
.....................................GTAAGGAAAAGCAGCTGGAG.......................................................................................................................................................................2011.0010000010
...................ACGATTTGACCAAGACGCGTAAGGAAA..................................................................................................................................................................................2711.0010000100
........................TTGACCAAGACGCGTAAGGAAA..................................................................................................................................................................................2211.0011000000
...................................GCGTAAGGAAAAGCAGCTGGA........................................................................................................................................................................2111.0011000000
.......................................AAGGAAAAGCAGCTGGAGG......................................................................................................................................................................1911.0010000100
..............................................AGCAGCTGGAGGGCGAAA................................................................................................................................................................1811.0011000000
.........................................GGAAAAGCAGCTGGAGGGCGAAAT...............................................................................................................................................................2411.0010000100
............................................AAAGCAGCTGGAGGGCGAAATCGC............................................................................................................................................................2411.0010100000
...................ACGATTTGACCAAGACGCGT.........................................................................................................................................................................................2011.0010000100
dp5
TGCTCGGGTCGCGTCTACTACGATCTGACCAAAATGCGTACCGAGAAGCAGCTGGAGAGCGACGTTGCCATTCTGCGTGTGGAGCAGGTGAGTCGTT--GTC-------CCAGCTTG-TCTCTG-----------------------TGAGCAGTGCTAAAGC-----TCG----------------TTCTCCAC--TC-CTC-TCCGTATAGGTCTCGCCCTTSizeHit CountTotal NormTotalM022

Male-body		M040

Female-body		M059

Embryo		M062

Head		V043

Embryo		V051

Head		V112

Male-body		SRR902010

Ovary		SRR902011

Testis		SRR902012

CNS imaginal disc
.........CGCGTCTACTACGATCTGAC...................................................................................................................................................................................................2014.0040200002000
...............................................GCAGCTGGAGAGCGACGTTG.............................................................................................................................................................2014.0040100003000
................................................CAGCTGGAGAGCGACGTTGCCA..........................................................................................................................................................2213.0030100011000
..................................TGCGTACCGAGAAGCAGCTGGAG.......................................................................................................................................................................2313.0030000001020
............................................................GACGTTGCCATTCTGCGTGT................................................................................................................................................2013.0030200100000
.................................ATGCGTACCGAGAAGCAGCTGGAGAG.....................................................................................................................................................................2613.0030000000030
..................................TGCGTACCGAGAAGCAGCTGGAGA......................................................................................................................................................................2413.0030000001020
...................................GCGTACCGAGAAGCAGCTGGAGA......................................................................................................................................................................2312.0020100000010
...................................GCGTACCGAGAAGCAGCTGGAG.......................................................................................................................................................................2212.0020000000020
..................................TGCGTACCGAGAAGCAGCTGGAGAG.....................................................................................................................................................................2512.0020000000020
...................................GCGTACCGAGAAGCAGCTGGAGAGC....................................................................................................................................................................2512.0020000000020
...............................................GCAGCTGGAGAGCGACGTTGCCA..........................................................................................................................................................2312.0020200000000
............................................................GACGTTGCCATTCTGCGTGTGGAGC...........................................................................................................................................2512.0020200000000
..............................AAAATGCGTACCGAGAAGCAGC............................................................................................................................................................................2212.0020020000000
............................................................GACGTTGCCATTCTGCGTGTGGAGCAG.........................................................................................................................................2712.0020200000000
.......................................ACCGAGAAGCAGCTGGAGAGCGACG................................................................................................................................................................2512.0020200000000
...............................................GCAGCTGGAGAGCGACGTTGCC...........................................................................................................................................................2212.0020100001000
..................................................GCTGGAGAGCGACGTTGCC...........................................................................................................................................................1912.0020200000000
.................................ATGCGTACCGAGAAGCAGCTGGAGA......................................................................................................................................................................2512.0020000010010
..................................................GCTGGAGAGCGACGTTGCCA..........................................................................................................................................................2012.0020200000000
..................................................GCTGGAGAGCGACGTTGCCATTC.......................................................................................................................................................2311.0010000010000
...............................................................GTTGCCATTCTGCGTGTGGAGCAG.........................................................................................................................................2411.0010100000000
......................................TACCGAGAAGCAGCTGGAGAG.....................................................................................................................................................................2111.0010000001000
.........................................CGAGAAGCAGCTGGAGAGCGACGTTG.............................................................................................................................................................2611.0010100000000
..............................................AGCAGCTGGAGAGCGACGTTGCC...........................................................................................................................................................2311.0010100000000
....CGGGTCGCGTCTACTACGATC.......................................................................................................................................................................................................2111.0010100000000
................................................CAGCTGGAGAGCGACGTTGCC...........................................................................................................................................................2111.0011000000000
.....................GATCTGACCAAAATGCGTACCGAGAAGC...............................................................................................................................................................................2811.0010100000000
.................................................AGCTGGAGAGCGACGTTGCCA..........................................................................................................................................................2111.0010000001000
.......................................ACCGAGAAGCAGCTGGAGAGC....................................................................................................................................................................2111.0010100000000
............GTCTACTACGATCTGACCAAAATGCGT.........................................................................................................................................................................................2711.0010000100000
..............................................AGCAGCTGGAGAGCGACGTTGCCATT........................................................................................................................................................2611.0010001000000
..............CTACTACGATCTGACCAAAATGC...........................................................................................................................................................................................2311.0010010000000
..........................................GAGAAGCAGCTGGAGAGCGACG................................................................................................................................................................2211.0010100000000
..............................................AGCAGCTGGAGAGCGACGTTGCCATC........................................................................................................................................................2611.0010100000000
.................CTACGATCTGACCAAAATGCGTA........................................................................................................................................................................................2311.0010000001000
...........................................................CGACGTTGCCATTCTGCGTGTGGAGCA..........................................................................................................................................2711.0010000001000
...TCGGGTCGCGTCTACTACGATCTG.....................................................................................................................................................................................................2411.0010100000000
.........CGCGTCTACTACGATCTGACC..................................................................................................................................................................................................2111.0010100000000
..................................TGCGTACCGAGAAGCAGCTG..........................................................................................................................................................................2011.0010000001000
..................................................GCTGGAGAGCGACGTTGCCAT.........................................................................................................................................................2111.0010000010000
................................................................TTGCCATTCTGCGTGTGGAGC...........................................................................................................................................2111.0010000010000
...................ACGATCTGACCAAAATGCGTACCGAG...................................................................................................................................................................................2611.0010100000000
.............................CAAAATGCGTACCGAGAAGCAGCTGGAG.......................................................................................................................................................................2811.0010000001000
.............................................AAGCAGCTGGAGAGCGACGTTGCC...........................................................................................................................................................2411.0010000001000
.................................................................TGCCATTCTGCGTGTGGAGCA..........................................................................................................................................2111.0010100000000
..................TACGATCTGACCAAAATGCGT.........................................................................................................................................................................................2111.0010000000010
....................................CGTACCGAGAAGCAGCTGGAG.......................................................................................................................................................................2111.0010100000000
..............................................AGCAGCTGGAGAGCGACGTTGCCA..........................................................................................................................................................2411.0010000001000
.GCTCGGGTCGCGTCTACT.............................................................................................................................................................................................................1811.0010100000000
...............................AAATGCGTACCGAGAAGCAGCTGGAG.......................................................................................................................................................................2611.0010000000010
.....................GATCTGACCAAAATGCGTACCG.....................................................................................................................................................................................2211.0010000001000
..........................GACCAAAATGCGTACCGAGAAGCA..............................................................................................................................................................................2411.0010100000000
.....................GATCTGACCAAAATGCGTACCGA....................................................................................................................................................................................2311.0010000100000
...................................GCGTACCGAGAAGCAGCTGGA........................................................................................................................................................................2111.0010100000000
................................AATGCGTACCGAGAAGCAGCTGGAG.......................................................................................................................................................................2511.0010000001000
..............................................................CGTTGCCATTCTGCGTGTG...............................................................................................................................................1911.0010100000000
.............................................AAGCAGCTGGAGAGCGACGTTG.............................................................................................................................................................2211.0010100000000
...............................................GCAGCTGGAGAGCGACGTT..............................................................................................................................................................1911.0010000010000
................ACTACGATCTGACCAAAATG............................................................................................................................................................................................2011.0010000010000
.........CGCGTCTACTACGATCTGACCA.................................................................................................................................................................................................2211.0010100000000
.................................................AGCTGGAGAGCGACGTTG.............................................................................................................................................................1811.0010100000000
......................................TACCGAGAAGCAGCTGGAGAGC....................................................................................................................................................................2211.0010000010000
...................ACGATCTGACCAAAATGCGT.........................................................................................................................................................................................2011.0010000001000
..........................................GAGAAGCAGCTGGAGAGCGACGTTG.............................................................................................................................................................2511.0010100000000
...........................................AGAAGCAGCTGGAGAGCGACGTTG.............................................................................................................................................................2411.0010000001000
........................................CCGAGAAGCAGCTGGAGAGCGACGTTG.............................................................................................................................................................2711.0010100000000
.............................CAAAATGCGTACCGAGAAGCAGCTGGA........................................................................................................................................................................2711.0010100000000
............................................GAAGCAGCTGGAGAGCGAC.................................................................................................................................................................1911.0010100000000
................................................CAGCTGGAGAGCGACGTTGCCATTCT......................................................................................................................................................2611.0010100000000
.................................................AGCTGGAGAGCGACGTTGCCATTCTG.....................................................................................................................................................2611.0010100000000
..........................................GAGAAGCAGCTGGAGAGC....................................................................................................................................................................1811.0010100000000
............................................................GACGTTGCCATTCTGCGTGTGG..............................................................................................................................................2211.0010010000000
.............TCTACTACGATCTGACCAAAA..............................................................................................................................................................................................2111.0010000001000
.......GTCGCGTCTACTACGATCTGACC..................................................................................................................................................................................................2311.0010100000000
...........................................................CGACGTTGCCATTCTGCGTGT................................................................................................................................................2111.0010100000000
.................................................AGCTGGAGAGCGACGTTGCC...........................................................................................................................................................2011.0010100000000
...................................GCGTACCGAGAAGCAGCTGGAGAG.....................................................................................................................................................................2411.0010000001000
.................CTACGATCTGACCAAAATGCGTACCG.....................................................................................................................................................................................2611.0010100000000
...........................................................................CGTGTGGAGCAGGTGAGT...................................................................................................................................1811.0010000010000
..............................................................CGTTGCCATTCTGCGTGTGGA.............................................................................................................................................2111.0010000100000
...........CGTCTACTACGATCTGACCA.................................................................................................................................................................................................2011.0010100000000
.......GTCGCGTCTACTACGATCT......................................................................................................................................................................................................1911.0010000100000
..................TACGATCTGACCAAAATGCGTACCGAGA..................................................................................................................................................................................2811.0010000010000
.................................................AGCTGGAGAGCGACGTTGCCATT........................................................................................................................................................2311.0010100000000
................................................................TTGCCATTCTGCGTGTGGAGCA..........................................................................................................................................2211.0010100000000
droPer2
TGCACTGGCAAGGTCTACTACGACCTTTTCAAGGAGCGCGAGGACCACGAGCAAGACGAAACGGTGGCTCTCGTTCGAATCGAACAGGTACCCTTGA--TCT-------AAATCATC-TCTA--------------------------GTGCAT--------------TTCCTCGGATACAGTGGTGTCTCCGTC--TC-CCC-TTTACTTAGATCTGCCCCTTSizeHit CountTotal NormTotalM021

Embryo		M042

Female-body		V042

Embryo		V050

Head		V057

Head		V111

Male-body
No Reads
droWil2
TGCACGGGTCGCGTCTACTACGATCTGACCAAGCTCCGTACTGAGAAGCAGTTGGAGAGTGATATTGCCATTGTGCGTGTGGAGCAGGTAAGTCTTG-GATG-------AAGTCAC--------ATTGCCATCCGATTCGA----TTGG-GGCT--------------GTT----------------CTAACACG--TT-TAT-TCTATGCAGATCTCGCCCTTSizeHit CountTotal NormTotalM020

Head		M045

Female-body		V117

Male-body		V118

Embryo		V119

Head
..............CTACTACGATCTGACCAAGCTCC...........................................................................................................................................................................................2315.00530110
..........................................GAGAAGCAGTTGGAGAGT....................................................................................................................................................................1814.00400040
...............................................................ATTGCCATTGTGCGTGTGG..............................................................................................................................................1913.00300030
..............CTACTACGATCTGACCAAGCT.............................................................................................................................................................................................2113.00310110
.......................................ACTGAGAAGCAGTTGGAGAG.....................................................................................................................................................................2013.00320100
............................................................GATATTGCCATTGTGCGTGT................................................................................................................................................2013.00300120
..........................................GAGAAGCAGTTGGAGAGTG...................................................................................................................................................................1913.00310110
........................CTGACCAAGCTCCGTACTGAGA..................................................................................................................................................................................2212.00220000
..........................................GAGAAGCAGTTGGAGAGTGATATTG.............................................................................................................................................................2512.00200020
..........................................GAGAAGCAGTTGGAGAGTGA..................................................................................................................................................................2012.00200110
............................................................GATATTGCCATTGTGCGTGTGGA.............................................................................................................................................2312.00200200
...............TACTACGATCTGACCAAGCTCC...........................................................................................................................................................................................2212.00220000
..............CTACTACGATCTGACCAAGCTC............................................................................................................................................................................................2212.00200020
.....................................GTACTGAGAAGCAGTTGGAGAGT....................................................................................................................................................................2312.00201100
............GTCTACTACGATCTGACCAAGCTCC...........................................................................................................................................................................................2512.00200110
............................................GAAGCAGTTGGAGAGTGATATTGC............................................................................................................................................................2412.00200200
......................ATCTGACCAAGCTCCGTACTGA....................................................................................................................................................................................2212.00202000
............................................................GATATTGCCATTGTGCGTGTGGAGCA..........................................................................................................................................2612.00200110
........................................................GAGTGATATTGCCATTGTGCGT..................................................................................................................................................2212.00200200
..................TACGATCTGACCAAGCTCCGTACT......................................................................................................................................................................................2412.00220000
..................TACGATCTGACCAAGCTCCGTA........................................................................................................................................................................................2211.00110000
..........................................................GTGATATTGCCATTGTGCGTGTGGA.............................................................................................................................................2511.00100010
...................................................TTGGAGAGTGATATTGCCATTGTGC....................................................................................................................................................2511.00100001
............................................................GATATTGCCATTGTGCGTGTGG..............................................................................................................................................2211.00100100
................ACTACGATCTGACCAAGCTCCG..........................................................................................................................................................................................2211.00100100
................ACTACGATCTGACCAAGCTCCGT.........................................................................................................................................................................................2311.00100100
............GTCTACTACGATCTGACC..................................................................................................................................................................................................1811.00110000
..........................................GAGAAGCAGTTGGAGAGTGAT.................................................................................................................................................................2111.00100100
....................................................TGGAGAGTGATATTGCCATTGT......................................................................................................................................................2211.00100010
..............................................AGCAGTTGGAGAGTGATATTGCCAT.........................................................................................................................................................2511.00100001
.................CTACGATCTGACCAAGCT.............................................................................................................................................................................................1811.00100010
................................................................TTGCCATTGTGCGTGTGGAGC...........................................................................................................................................2111.00100010
......................................................................................................................................GATTCGA----TTGG-GGCT--------------GTT----------------CTAA.................................2211.00100100
.........................................TGAGAAGCAGTTGGAGAGT....................................................................................................................................................................1911.00110000
..............CTACTACGATCTGACCAAGCTCCGT.........................................................................................................................................................................................2511.00100100
.GCACGGGTCGCGTCTACTACGA.........................................................................................................................................................................................................2211.00100010
.....................................GTACTGAGAAGCAGTTGGAGAG.....................................................................................................................................................................2211.00100100
..................................................................GCCATTGTGCGTGTGGAGCA..........................................................................................................................................2011.00100010
..........................GACCAAGCTCCGTACTGAGAAGC...............................................................................................................................................................................2311.00100010
.....................................................................ATTGTGCGTGTGGAGCAGA........................................................................................................................................1911.00100100
................ACTACGATCTGACCAAGCTCCGTACC......................................................................................................................................................................................2611.00110000
.............TCTACTACGATCTGACCAAGCTCCGT.........................................................................................................................................................................................2611.00100001
...............................................................ATTGCCATTGTGCGTGTGGAGCA..........................................................................................................................................2311.00100100
......................................TACTGAGAAGCAGTTGGAGAG.....................................................................................................................................................................2111.00110000
................ACTACGATCTGACCAAGCT.............................................................................................................................................................................................1911.00110000
..............................................AGCAGTTGGAGAGTGATATTGCCATT........................................................................................................................................................2611.00100010
.........CGCGTCTACTACGATCTGACCAAGCT.............................................................................................................................................................................................2611.00110000
....................................CGTACTGAGAAGCAGTTGGAG.......................................................................................................................................................................2111.00100100
.........CGCGTCTACTACGATCTGA....................................................................................................................................................................................................1911.00100010
..................................................GTTGGAGAGTGATATTGC............................................................................................................................................................1811.00100010
.....................................GTACTGAGAAGCAGTTGGAGAGTG...................................................................................................................................................................2411.00110000
........................CTGACCAAGCTCCGTACTG.....................................................................................................................................................................................1911.00100010
.....................................................GGAGAGTGATATTGCCATTGTGC....................................................................................................................................................2311.00101000
..............CTACTACGATCTGACCAAGCTCCGTA........................................................................................................................................................................................2611.00100010
...........................................AGAAGCAGTTGGAGAGTGATAT...............................................................................................................................................................2211.00100100
TGCACGGGTCGCGTCTACTAC...........................................................................................................................................................................................................2111.00100010
........................CTGACCAAGCTCCGTACTGAGAAGCA..............................................................................................................................................................................2611.00110000
............GTCTACTACGATCTGACCAAGCTCCGTA........................................................................................................................................................................................2811.00110000
..........................................................GTGATATTGCCATTGTGCGTGT................................................................................................................................................2211.00100010
.............................................................ATATTGCCATTGTGCGTGTGG..............................................................................................................................................2111.00100010
........................................CTGAGAAGCAGTTGGAGAGTGAT.................................................................................................................................................................2311.00100100
...............TACTACGATCTGACCAAGC..............................................................................................................................................................................................1911.00100010
........................................................GAGTGATATTGCCATTGTGCGTGT................................................................................................................................................2411.00100010
............GTCTACTACGATCTGACCAAGCTCCGT.........................................................................................................................................................................................2711.00100100
............GTCTACTACGATCTGACCAAGCT.............................................................................................................................................................................................2311.00100100
...............................................................ATTGCCATTGTGCGTGTGGAG............................................................................................................................................2111.00100010
droVir3
TGCACGGGTCGCGTTTACTACGATCTGACCAAGGCGCGTACCGAGAAGCAGTTGGAGAAGGATATTGCCATTGTGCGCGTGGAGCAGGTGCGCCTAT-CATT-------AAGTTATT-CATCAA-----------------------TTTGCAT--------------TTA----------------AATGCATT--TT-TAA-CATTTGCAGGTGTCGCCGTTSizeHit CountTotal NormTotalM027

Male-body		M028

Head		M047

Female-body		M061

Embryo		SRR060654

Ovary		SRR060655

Testis		SRR060656

Ovary		SRR060657

Testis		SRR060658

Ovary		SRR060659

Testis		SRR060660

Ovary		SRR060661

Embryo		SRR060662

Embryo		SRR060663

Embryo		SRR060664

Male-body		SRR060665

Female-body		SRR060666

Male-body		SRR060667

Female-body		SRR060668

Male-body		SRR060669

Female-body		SRR060670

Testis		SRR060671

Male-body		SRR060672

Female-body		SRR060673

Ovary		SRR060674

Ovary		SRR060675

Ovary		SRR060676

Ovary		SRR060677

Ovary		SRR060678

Testis		SRR060679

Testis		SRR060680

Testis		SRR060681

Testis		SRR060682

Embryo		SRR060683

Testis		SRR060684

Embryo		SRR060685

Embryo		SRR060686

Embryo		SRR060687

Embryo		SRR060688

Ovary		SRR060689

Testis		SRR1106712

embryo_0-2h		SRR1106713

embryo_0-2h		SRR1106714

embryo_2-4h		SRR1106715

embryo_4-6h		SRR1106716

embryo_4-6h		SRR1106717

embryo_6-8h		SRR1106718

embryo_6-8h		SRR1106719

embryo_8-10h		SRR1106720

embryo_8-10h		SRR1106721

embryo_10-12h		SRR1106722

embryo_10-12h		SRR1106723

embryo_12-14h		SRR1106724

embryo_12-14h		SRR1106725

embryo_14-16h		SRR1106726

embryo_14-16h		SRR1106727

larvae		SRR1106728

larvae		SRR1106729

mixed whole adult body		SRR1106730

embryo_16-30h		V047

Embryo		V053

Head		V116

Male-body		GSM1528803

follicle cells		SRR2096013

Ovary_Strain_9_oxidized		SRR2096014

Ovary_Strain_160_oxidized		SRR2096026

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096038

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096050

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096055

Ovary_Min_43		SRR2096056

Ovary_Min_46		SRR2096057

Ovary_Min_50		SRR2096058

Ovary_Min_98		SRR2096059

Ovary_Min_164		SRR2096060

Ovary_Min_193		SRR2096061

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096072

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096079

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096080

embryo_0-2h from 15to16 day old nondysgenic mothers		SRR2096081

embryo_0-2h from 15to16 day old nondysgenic mothers
..................................................GTTGGAGAAGGATATTGCCA..........................................................................................................................................................2015.0050030000000000000010100000000000000000000000000000000000000000000000000000000000
.........CGCGTTTACTACGATCTGACCAAGGCGC...........................................................................................................................................................................................2814.0040010000000000000000000000000000000000000000000000000000000000200000000100000000
.................................................................TGCCATTGTGCGCGTGGAGCA..........................................................................................................................................2114.0040020000000000000000100000000010000000000000000000000000000000000000000000000000
...............TACTACGATCTGACCAAGGC.............................................................................................................................................................................................2014.0040000000000000000001000000000000000000000000000000000000000000000000030000000000
.........CGCGTTTACTACGATCTGACC..................................................................................................................................................................................................2113.0030010000000000000000000000000000000000000000000000000000000000000000001010000000
............GTTTACTACGATCTGACCAAGGC.............................................................................................................................................................................................2313.0030010000000000000010000000000000000000000000000000000000000000100000000000000000
................ACTACGATCTGACCAAGGCG............................................................................................................................................................................................2013.0030000000000000000000000000000000000000000000000000000000000000000000000003000000
...............................................GCAGTTGGAGAAGGATATTGCC...........................................................................................................................................................2213.0030000000000100000001000000000000000000000000000000000000000000100000000000000000
...................ACGATCTGACCAAGGCGCGTACCGAGAA.................................................................................................................................................................................2813.0030010000000000000000000000000000000000000000000000000000001000000010000000000000
.............................................AAGCAGTTGGAGAAGGATATTGCC...........................................................................................................................................................2412.0020010000000000000000001000000000000000000000000000000000000000000000000000000000
..............................................AGCAGTTGGAGAAGGATATTGCC...........................................................................................................................................................2312.0020100000000000000000000000000000000000000000000000000000000001000000000000000000
...............................AGGCGCGTACCGAGAAGCA..............................................................................................................................................................................1912.0020010000000000000000000000000000000000000000000000000000000001000000000000000000
................ACTACGATCTGACCAAGGCGCG..........................................................................................................................................................................................2212.0020110000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................GAGAAGCAGTTGGAGAAGGAT.................................................................................................................................................................2112.0020000000000000000011000000000000000000000000000000000000000000000000000000000000
............GTTTACTACGATCTGACCAAGGCGC...........................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000200000000000000000
..........GCGTTTACTACGATCTGACCAAGGCGC...........................................................................................................................................................................................2712.0021010000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................AGCAGTTGGAGAAGGATATTGCCA..........................................................................................................................................................2412.0020020000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................ATTGCCATTGTGCGCGTGGAGCAGGT.......................................................................................................................................2612.0020000000000000000001000000000000000000000000000000000000000000100000000000000000
..........................GACCAAGGCGCGTACCGA....................................................................................................................................................................................1812.0020020000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................GCCATTGTGCGCGTGGAGCA..........................................................................................................................................2012.0020000000000000000010000100000000000000000000000000000000000000000000000000000000
.........CGCGTTTACTACGATCTGACCAAGGCG............................................................................................................................................................................................2712.0020010000000000000000000000000000000000000000000000000000000000100000000000000000
..........................................GAGAAGCAGTTGGAGAAGG...................................................................................................................................................................1912.0020011000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................CGAGAAGCAGTTGGAGAAG....................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000100000010000000000
.......................................................................TGTGCGCGTGGAGCAGGTGT.....................................................................................................................................2011.0010000000000000000000100000000000000000000000000000000000000000000000000000000000
................ACTACGATCTGACCAAGGCA............................................................................................................................................................................................2011.0010000000000000000010000000000000000000000000000000000000000000000000000000000000
...............................................GCAGTTGGAGAAGGATATTGCCA..........................................................................................................................................................2311.0010010000000000000000000000000000000000000000000000000000000000000000000000000000
..............................AAGGCGCGTACCGAGAAGCAGTTGGAG.......................................................................................................................................................................2711.0010010000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................GAGAAGGATATTGCCATTGTGCGCGT................................................................................................................................................2611.0010000000000000000000000000000000000100000000000000000000000000000000000000000000
........................CTGACCAAGGCGCGTACCG.....................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000010000000000000000
.GCACGGGTCGCGTTTACTACGATCTGACCAAGGCGCGTACC......................................................................................................................................................................................4111.0010000000000000000000000000000000000000000000000000000000001000000000000000000000
............................................GAAGCAGTTGGAGAAGGAT.................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000100000000000000000
.........................................CGAGAAGCAGTTGGAGAAGGATA................................................................................................................................................................2311.0010010000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................GAAGGATATTGCCATTGTGCGCGTGG..............................................................................................................................................2611.0010010000000000000000000000000000000000000000000000000000000000000000000000000000
........................................CCGAGAAGCAGTTGGAGAAG....................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000100000000
.............................................AAGCAGTTGGAGAAGGATAT...............................................................................................................................................................2011.0010000000000000000000100000000000000000000000000000000000000000000000000000000000
..........GCGTTTACTACGATCTGACCAAGGCGCGT.........................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000100000000000000000
.........CGCGTTTACTACGATCTGACCAAGG..............................................................................................................................................................................................2511.0010010000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................GAGAAGCAGTTGGAGAAGGATA................................................................................................................................................................2211.0010000000000000000010000000000000000000000000000000000000000000000000000000000000
............GTTTACTACGATCTGACCAAGGCGCGTACCGAGAA.................................................................................................................................................................................3511.0010000000000000000000000000000000000000000000000000000000100000000000000000000000
..............................AAGGCGCGTACCGAGAAGCAGTTGGA........................................................................................................................................................................2611.0010010000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................GTGCGCGTGGAGCAGGTGTC....................................................................................................................................2021.0020000000000000000010100000000000000000000000000000000000000000000000000000000000
.....................................................................ATTGTGCGCGTGGAGCAGGT.......................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000100000000000000000
...........CGTTTACTACGATCTGACCAAGGCGC...........................................................................................................................................................................................2611.0010010000000000000000000000000000000000000000000000000000000000000000000000000000
.....................GATCTGACCAAGGCGCGTA........................................................................................................................................................................................1911.0010000000000000010000000000000000000000000000000000000000000000000000000000000000
..................TACGATCTGACCAAGGCGCGTACC......................................................................................................................................................................................2411.0010010000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................ATTGTGCGCGTGGAGCAGGTGTCG...................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000100000000000000000
...............................................................ATTGCCATTGTGCGCGTGGAGCAGGTGT.....................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000100000000000000000
...................ACGATCTGACCAAGGCGCGTA........................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000001000000000000000000
..............TTACTACGATCTGACCAAGGC.............................................................................................................................................................................................2111.0010001000000000000000000000000000000000000000000000000000000000000000000000000000
....................................CGTACCGAGAAGCAGTTGGA........................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000010
........................................................GAAGGATATTGCCATTGTGCGC..................................................................................................................................................2211.0010010000000000000000000000000000000000000000000000000000000000000000000000000000
.GCACGGGTCGCGTTTACT.............................................................................................................................................................................................................1811.0010010000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................GTACCGAGAAGCAGTTGGAGAAGG...................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000100000000000000000
...................ACGATCTGACCAAGGCGCGTACCG.....................................................................................................................................................................................2411.0010010000000000000000000000000000000000000000000000000000000000000000000000000000
......................ATCTGACCAAGGCGCGTACCGAGAAGCA..............................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000100000000000000000
................................GGCGCGTACCGAGAAGCAGTTGG.........................................................................................................................................................................2311.0010010000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................TTGCCATTGTGCGCGTGGAGCAGGTGT.....................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000010000000000000000000
........................CTGACCAAGGCGCGTACCGAGAA.................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000001000
.................................................AGTTGGAGAAGGATATTGC............................................................................................................................................................1911.0010000000000000100000000000000000000000000000000000000000000000000000000000000000
..................................................................GCCATTGTGCGCGTGGAGC...........................................................................................................................................1911.0010010000000000000000000000000000000000000000000000000000000000000000000000000000
............................................GAAGCAGTTGGAGAAGGATATTGCCA..........................................................................................................................................................2611.0010000000000000000000100000000000000000000000000000000000000000000000000000000000
.............................................................ATATTGCCATTGTGCGCGTGGAGCAGG........................................................................................................................................2711.0010001000000000000000000000000000000000000000000000000000000000000000000000000000
.........CGCGTTTACTACGATCTGACCAA................................................................................................................................................................................................2311.0010001000000000000000000000000000000000000000000000000000000000000000000000000000
..............TTACTACGATCTGACCAAGGCGC...........................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000100000000000000000
.............................................AAGCAGTTGGAGAAGGATATTGC............................................................................................................................................................2311.0010000000000000000000100000000000000000000000000000000000000000000000000000000000
....................................CGTACCGAGAAGCAGTTGGAGA......................................................................................................................................................................2211.0010000000000000000010000000000000000000000000000000000000000000000000000000000000
............................................GAAGCAGTTGGAGAAGGATATTGCCAT.........................................................................................................................................................2711.0010000000000000000010000000000000000000000000000000000000000000000000000000000000
...................................GCGTACCGAGAAGCAGTTGGAGAAGGAT.................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000100000000000000000
................ACTACGATCTGACCAAGGCGCGTACC......................................................................................................................................................................................2611.0010001000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................GTTGGAGAAGGATATTGCC...........................................................................................................................................................1911.0010000000100000000000000000000000000000000000000000000000000000000000000000000000
....CGGGTCGCGTTTACTACGATCTGACCA.................................................................................................................................................................................................2711.0010010000000000000000000000000000000000000000000000000000000000000000000000000000
.........................TGACCAAGGCGCGTACCGAGAAGCAGT............................................................................................................................................................................2711.0010000000000000000001000000000000000000000000000000000000000000000000000000000000
...................ACGATCTGACCAAGGCGCGTACCGAGA..................................................................................................................................................................................2711.0010010000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................TTGTGCGCGTGGAGCAGGTGTCG...................................................................................................................................2311.0010000000000000000001000000000000000000000000000000000000000000000000000000000000
........................................CCGAGAAGCAGTTGGAGAAGGA..................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000001000000000000000000
.....................................GTACCGAGAAGCAGTTGGAGAAGGATA................................................................................................................................................................2711.0010000000000000000000001000000000000000000000000000000000000000000000000000000000
..........................................GAGAAGCAGTTGGAGAAGGATATTGC............................................................................................................................................................2611.0010000000000000000010000000000000000000000000000000000000000000000000000000000000
......................ATCTGACCAAGGCGCGTACC......................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000010000000
..............TTACTACGATCTGACCAAGGCGCG..........................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000001000000000000
...............TACTACGATCTGACCAAGGCGCGTACCGAGAA.................................................................................................................................................................................3211.0010000000000000000000000000000000000000000000000000000000001000000000000000000000
.....................................................GGAGAAGGATATTGCCATTGTGCGC..................................................................................................................................................2511.0010001000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................TGCCATTGTGCGCGTGGAGCAGG........................................................................................................................................2311.0010010000000000000000000000000000000000000000000000000000000000000000000000000000
.....................GATCTGACCAAGGCGCGTACCGAGAAGCA..............................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000100000000000000000
....................CGATCTGACCAAGGCGCGTACCG.....................................................................................................................................................................................2311.0010010000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................AAGCAGTTGGAGAAGGAT.................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000001000000000000000000
...................................................TTGGAGAAGGATATTGCCATTGTGCGCG.................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000010000000000
..........GCGTTTACTACGATCTGACCAAGGCGCGTACCGAGA..................................................................................................................................................................................3611.0010000000000000000000000000000000000000000000000000000000001000000000000000000000
...............................................................ATTGCCATTGTGCGCGTGG..............................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000100000000000000000
..............TTACTACGATCTGACCAAGGCGCGTACC......................................................................................................................................................................................2811.0010000000000000001000000000000000000000000000000000000000000000000000000000000000
............GTTTACTACGATCTGACCA.................................................................................................................................................................................................1911.0010010000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................GAAGGATATTGCCATTGTGCGCGT................................................................................................................................................2411.0010010000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................GAGAAGCAGTTGGAGAAG....................................................................................................................................................................1811.0010100000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................AGAAGCAGTTGGAGAAGGATA................................................................................................................................................................2111.0010000000000000000010000000000000000000000000000000000000000000000000000000000000
..........................................................AGGATATTGCCATTGTGCGC..................................................................................................................................................2011.0010010000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................ATTGTGCGCGTGGAGCAGGTG......................................................................................................................................2111.0010000000000000000000000000000000000001000000000000000000000000000000000000000000
...................................................TTGGAGAAGGATATTGCCA..........................................................................................................................................................1911.0010010000000000000000000000000000000000000000000000000000000000000000000000000000
............................CCAAGGCGCGTACCGAGAAGC...............................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000100000000000000000
..........................GACCAAGGCGCGTACCGAGAAGCAGTT...........................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000100000000000000000
....................CGATCTGACCAAGGCGCGT.........................................................................................................................................................................................1911.0010010000000000000000000000000000000000000000000000000000000000000000000000000000
...ACGGGTCGCGTTTACTAC...........................................................................................................................................................................................................1811.0010000000000000100000000000000000000000000000000000000000000000000000000000000000
.........CGCGTTTACTACGATCTGAC...................................................................................................................................................................................................2011.0010010000000000000000000000000000000000000000000000000000000000000000000000000000
.....................GATCTGACCAAGGCGCGTACCGAGAA.................................................................................................................................................................................2611.0010010000000000000000000000000000000000000000000000000000000000000000000000000000
.GCACGGGTCGCGTTTACTA............................................................................................................................................................................................................1911.0010010000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................TGGAGAAGGATATTGCCATT........................................................................................................................................................2011.0010000000000000010000000000000000000000000000000000000000000000000000000000000000
..............................................................TATTGCCATTGTGCGCGTGGAGCAG.........................................................................................................................................2511.0010000000000000000000100000000000000000000000000000000000000000000000000000000000
.................CTACGATCTGACCAAGGCGC...........................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000001000000
....................................................................CATTGTGCGCGTGGAGCA..........................................................................................................................................1811.0010000001000000000000000000000000000000000000000000000000000000000000000000000000
....................CGATCTGACCAAGGCGCGTACCGA....................................................................................................................................................................................2411.0010010000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................GCAGTTGGAGAAGGATATTGCCATT........................................................................................................................................................2511.0010000000000000000010000000000000000000000000000000000000000000000000000000000000
...............................AGGCGCGTACCGAGAAGC...............................................................................................................................................................................1811.0010010000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................AGGATATTGCCATTGTGCGCGTGGA.............................................................................................................................................2511.0010001000000000000000000000000000000000000000000000000000000000000000000000000000
....CGGGTCGCGTTTACTACG..........................................................................................................................................................................................................1811.0010010000000000000000000000000000000000000000000000000000000000000000000000000000
..........................GACCAAGGCGCGTACCGAGAAGCA..............................................................................................................................................................................2411.0010000000000000000001000000000000000000000000000000000000000000000000000000000000
...........................................AGAAGCAGTTGGAGAAGGATATTGCC...........................................................................................................................................................2611.0010010000000000000000000000000000000000000000000000000000000000000000000000000000
.GCACGGGTCGCGTTTACTACGATC.......................................................................................................................................................................................................2411.0010010000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................AGCAGTTGGAGAAGGATA................................................................................................................................................................1811.0010010000000000000000000000000000000000000000000000000000000000000000000000000000
.........CGCGTTTACTACGATCTGACCAAGGC.............................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000100000000000000000
....CGGGTCGCGTTTACTACGATCTGACC..................................................................................................................................................................................................2611.0010100000000000000000000000000000000000000000000000000000000000000000000000000000
...............TACTACGATCTGACCAAGGCGCGTACC......................................................................................................................................................................................2711.0010010000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................TATTGCCATTGTGCGCGTGG..............................................................................................................................................2011.0010010000000000000000000000000000000000000000000000000000000000000000000000000000
.........................TGACCAAGGCGCGTACCGAGA..................................................................................................................................................................................2111.0010010000000000000000000000000000000000000000000000000000000000000000000000000000
.......................TCTGACCAAGGCGCGTACCGAGAAG................................................................................................................................................................................2511.0010100000000000000000000000000000000000000000000000000000000000000000000000000000
................................GGCGCGTACCGAGAAGCAGTTGGAG.......................................................................................................................................................................2511.0010010000000000000000000000000000000000000000000000000000000000000000000000000000
............GTTTACTACGATCTGACCAA................................................................................................................................................................................................2011.0010000000000000010000000000000000000000000000000000000000000000000000000000000000
.......................TCTGACCAAGGCGCGTACCGAGAA.................................................................................................................................................................................2411.0010010000000000000000000000000000000000000000000000000000000000000000000000000000
...................ACGATCTGACCAAGGCGCGTACC......................................................................................................................................................................................2311.0010010000000000000000000000000000000000000000000000000000000000000000000000000000
......................ATCTGACCAAGGCGCGTAC.......................................................................................................................................................................................1911.0010010000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................ATTGCCATTGTGCGCGTGGA.............................................................................................................................................2011.0010000000000000000010000000000000000000000000000000000000000000000000000000000000
..............................................AGCAGTTGGAGAAGGATATTGCCAT.........................................................................................................................................................2511.0010000000000000000010000000000000000000000000000000000000000000000000000000000000
.................................................AGTTGGAGAAGGATATTGCCA..........................................................................................................................................................2111.0010010000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................GCAGTTGGAGAAGGATATTGCCATTGTGC....................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000001000000000000000000
......................................TACCGAGAAGCAGTTGGAGAAG....................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000001000000000000000000
..............................................AGCAGTTGGAGAAGGATAT...............................................................................................................................................................1911.0010010000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................TGCCATTGTGCGCGTGGAGC...........................................................................................................................................2011.0010010000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................ATTGCCATTGTGCGCGTGGAGC...........................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000100000000000000000
...............................................GCAGTTGGAGAAGGATATT..............................................................................................................................................................1911.0010000000000000000010000000000000000000000000000000000000000000000000000000000000
............GTTTACTACGATCTGACCAAGG..............................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000100000000000000000
droMoj3
TGCACAGGTCGTGTCTACTACGACCTGACTAAGACGCGTGCCGAGAAGCAGCTGGAGAAGGACATCGCCATCGTGCGTGTGGAGCAGGTGCGTCTTTGGGTT------------ATT--------GACTT--TATATGCAT-T----TGAA-TT--------------TCA----------------CTAAATTGAGTT-TTCGC-TTCATAGGTGTCACCCTTSizeHit CountTotal NormTotalM046

Female-body		V041

Embryo		V049

Head		V056

Head		M060

Embryo		V110

Male-body
..........GTGTCTACTACGACCTGACTAAGA..............................................................................................................................................................................................2412.002200000
..................................................GCTGGAGAAGGACATCGCCATCGTGCG...................................................................................................................................................2712.002000002
..................................................GCTGGAGAAGGACATCGCC...........................................................................................................................................................1912.002000101
................ACTACGACCTGACTAAGACGCGT.........................................................................................................................................................................................2312.002001001
................................................................TCGCCATCGTGCGTGTGGAGCA..........................................................................................................................................2211.001000001
..................TACGACCTGACTAAGACGCGT.........................................................................................................................................................................................2111.001100000
.........................................................AAGGACATCGCCATCGTG.....................................................................................................................................................1811.001000001
.................................................AGCTGGAGAAGGACATCGCC...........................................................................................................................................................2011.001000001
.....................GACCTGACTAAGACGCGTGCCGA....................................................................................................................................................................................2311.001100000
.......................................................................CGTGCGTGTGGAGCAGGTG......................................................................................................................................1911.001000001
................ACTACGACCTGACTAAGACGCGTGCC......................................................................................................................................................................................2611.001000100
.....................GACCTGACTAAGACGCGTGCCGAGAA.................................................................................................................................................................................2611.001000001
...............................................GCAGCTGGAGAAGGACATCGCC...........................................................................................................................................................2211.001100000
..............................AAGACGCGTGCCGAGAAGC...............................................................................................................................................................................1911.001000001
..................TACGACCTGACTAAGACGCG..........................................................................................................................................................................................2011.001100000
....................................................TGGAGAAGGACATCGCCATCG.......................................................................................................................................................2111.001100000
..............................AAGACGCGTGCCGAGAAGCA..............................................................................................................................................................................2011.001001000
......................ACCTGACTAAGACGCGTGCCGAGA..................................................................................................................................................................................2411.001100000
.......................................GCCGAGAAGCAGCTGGAGAAGGAC.................................................................................................................................................................2411.001100000
..............................................AGCAGCTGGAGAAGGACATCGCC...........................................................................................................................................................2311.001000001
................................................................TCGCCATCGTGCGTGTGGAGCAGGT.......................................................................................................................................2511.001000001
..................................................GCTGGAGAAGGACATCGCCATC........................................................................................................................................................2211.001000001
.........CGTGTCTACTACGACCTGACTA.................................................................................................................................................................................................2211.001100000
..................................................................GCCATCGTGCGTGTGGAGCAGGTGTC....................................................................................................................................2611.001000001
..................................................................GCCATCGTGCGTGTGGAGCA..........................................................................................................................................2011.001000001
.................................................................CGCCATCGTGCGTGTGGAGC...........................................................................................................................................2011.001100000
...................................GCGTGCCGAGAAGCAGCTG..........................................................................................................................................................................1911.001000100
............GTCTACTACGACCTGACTAAGA..............................................................................................................................................................................................2211.001100000
.............................................AAGCAGCTGGAGAAGGACATCGC............................................................................................................................................................2311.001000001
.................................................AGCTGGAGAAGGACATCG.............................................................................................................................................................1811.001100000
................ACTACGACCTGACTAAGACGCGTGCCG.....................................................................................................................................................................................2711.001000001
.....................GACCTGACTAAGACGCGTGCC......................................................................................................................................................................................2111.001100000
............................................................GACATCGCCATCGTGCGTGTGGAGCAG.........................................................................................................................................2711.001100000
..........GTGTCTACTACGACCTGACTAAGAC.............................................................................................................................................................................................2511.001100000
...............................AGACGCGTGCCGAGAAGCAGCT...........................................................................................................................................................................2211.001000001
...........................................AGAAGCAGCTGGAGAAGGAC.................................................................................................................................................................2011.001000001
.........CGTGTCTACTACGACCTGACTAAGAC.............................................................................................................................................................................................2611.001100000
.....................GACCTGACTAAGACGCGTGCCG.....................................................................................................................................................................................2211.001100000
...............................................................ATCGCCATCGTGCGTGTGGAGCA..........................................................................................................................................2311.001100000
............GTCTACTACGACCTGACTAAGACG............................................................................................................................................................................................2411.001100000
..................................................................GCCATCGTGCGTGTGGAGC...........................................................................................................................................1911.001100000
................................GACGCGTGCCGAGAAGCAGCT...........................................................................................................................................................................2111.001000001
.................CTACGACCTGACTAAGACGC...........................................................................................................................................................................................2011.001100000
....................................CGTGCCGAGAAGCAGCTGGAGA......................................................................................................................................................................2211.001000001
...........................................AGAAGCAGCTGGAGAAGG...................................................................................................................................................................1820.501000010
.........................................................................TGCGTGTGGAGCAGGTGTCA...................................................................................................................................20200.051000010
droGri2
TGCACGGGTCGCGTCTACTACGATCTGACCAAGGCGCGTGCCGACAAGCAACTGCAGAGCGATATTGCCATTGTGCGCGTGGAGCAGGTGCGTCTATTCATT-------AAGAAAT--------TTTGCC--A-------ATCAAAT-------------------TTGTA----------------CTAAATTAAGTTGTGG-CATTTGTAGGTATCGCCCTTSizeHit CountTotal NormTotalM041

Female-body		V109

Male-body
No Reads

Generated: 10/20/2015 at 07:25 PM