ID:

dan_2310

 Coordinate:

scaffold_13337:162781-163066 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-9.3 -9.2 -8.7

Flybase annnotation

CDS [Dana\GF24880-cds]; exon [dana_GLEANR_9568:5]; CDS [Dana\GF24880-cds]; exon [dana_GLEANR_9568:6]; intron [Dana\GF24880-in]

No Repeatable elements found

Sense Strand Reads

##################################################----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
CGGAGCTGCGGGCCGAGTACAAGAACTTCAAGATCTTCTTTGTCCACACGGTGAGTGTTGAGGTGGTCGTAGATGGTGGAAAGACTGTGGAAAGTGCTAGTTGCCGGTTGGGGGACGGATGGAGGGTGACGTCATGGCTGTCTCGGTCGCACGCCCACTAAAAAGCCATTTGGGGGGCACTTTATGGCCCCGGCACGTGTTGGCGATGAAAACAAATTAAATGCGGCATTGAAAACTGCACACGCAACAGAGATAAAAAGCGACTTGAACTGGAATAGGAAGGGGTGAAGACCTGAAACGAGCGCCAACTAATTTGTGTATTCTTTTGCATTGCAGCCAAATCGCACCTACTACTTGGATGACCCCGAGGGCTACGCCATCCACTG
****************************************************************.(((...((((((((..(((((......))).))..))))).)))....)))............****************************************************************************************************************************************************************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M058
embryo
 M044
female body
 V106
head
 V105
male body		 V055
head
 V039
embryo
..............................................................................................................................................................................................................................................................................TGGAATAGGAAGAGGTGAA................................................................................................. 19 1 1 3.00 3 2 1 0 0 0 0
................................................................GGTCGTAGATGGTGGAAAG............................................................................................................................................................................................................................................................................................................... 19 0 1 2.00 2 0 0 2 0 0 0
.....................................................................................................................................................................................................................................................................................................................................................................GATGACCCCGAGGGCTACGCCATC..... 24 0 1 1.00 1 1 0 0 0 0 0
.............................................................................................................GGGGGACGGATGGAGGGTG.................................................................................................................................................................................................................................................................. 19 0 1 1.00 1 0 0 1 0 0 0
......................GAACTTCAAGATCTTCTTTGTC...................................................................................................................................................................................................................................................................................................................................................... 22 0 1 1.00 1 0 0 1 0 0 0
....................................................................................................................................................................................................................................................................................................................................................ATCGCACCTACTACTTGGAT.......................... 20 0 1 1.00 1 1 0 0 0 0 0
....................................................................................................................................................................................TTTATGGCCCCGGCACGTGTTGGCG..................................................................................................................................................................................... 25 0 1 1.00 1 0 0 1 0 0 0
.................................................................................................................................................................................................................................................ACGCAACAGAGATAACTAGC............................................................................................................................. 20 2 1 1.00 1 0 0 0 0 1 0
.............................................................................................................GGGGGACGGATGGAGGGTGAC................................................................................................................................................................................................................................................................ 21 0 1 1.00 1 0 1 0 0 0 0
..............................................................................................................................................................................................................................................................................................................................................................CGACTTGGATGACCCCGAGGG............... 21 1 1 1.00 1 1 0 0 0 0 0
...........................................................................................................................................................................................................................................................................................GGTGAAGACCTGAAACGAGC................................................................................... 20 0 1 1.00 1 0 1 0 0 0 0
......................................................................................................................................................................................................................................................................................................................................................CGCACCTACTACTTGGATGACCCCGAGGG............... 29 0 1 1.00 1 1 0 0 0 0 0
......................................................................................................................ATGGAGGGTGACGTCATGGCT....................................................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 1 0 0
........................................................................................................................................................................................................................................................................................................................................................................GACCCCGAGGGCTACGCCATCCACTG 26 0 1 1.00 1 0 1 0 0 0 0
.............................AAGATCTTCTTTGTCCATACGGTAAGT.......................................................................................................................................................................................................................................................................................................................................... 27 2 1 1.00 1 1 0 0 0 0 0
...................................................................................................................................................................................................................................................................................................................................................AATTGCACCTACTACTTGGAT.......................... 21 1 1 1.00 1 1 0 0 0 0 0
.........................................................................................................................................................................................................................................................................................GGGGTGAAGACCTGAAACGAGCGC................................................................................. 24 0 1 1.00 1 0 1 0 0 0 0
......................................................................................................GCCGGTTGGGGGACGGATGGAGG..................................................................................................................................................................................................................................................................... 23 0 1 1.00 1 0 1 0 0 0 0
............................................................................................................................................................................................................................................................................ACTGGAATAGGAAGGGGTGAAGACC............................................................................................. 25 0 1 1.00 1 0 0 0 1 0 0
..............................................................................................................GGGGACGGATGGAGGGTGA................................................................................................................................................................................................................................................................. 19 0 1 1.00 1 0 1 0 0 0 0
.....................................................................................................................................................................................................................................................................................................................................................................GATGACCCCGAGGGCTACGCCATCCACC. 28 1 1 1.00 1 1 0 0 0 0 0
........................................................................................................................................GCTGTCTCGGTCGCACGCCC...................................................................................................................................................................................................................................... 20 0 1 1.00 1 0 1 0 0 0 0
..............................................................................................................................................................................................................................................................................................................................................CGCCAAATCGCACCTACTACTTGGATGA........................ 28 1 1 1.00 1 1 0 0 0 0 0
.........................................................................................................................................................................................................................................................................TGAACTGGAATAGGAAGGGGTGAAGA............................................................................................... 26 0 1 1.00 1 0 0 0 1 0 0
................................ATCTTCTTTGTCCACACGC............................................................................................................................................................................................................................................................................................................................................... 19 1 1 1.00 1 0 1 0 0 0 0
........................ACTTCAAGATCTTCTTTGTCCACACGCCA............................................................................................................................................................................................................................................................................................................................................. 29 3 1 1.00 1 1 0 0 0 0 0
................GTACAAGAACTTCAAGATC............................................................................................................................................................................................................................................................................................................................................................... 19 0 1 1.00 1 1 0 0 0 0 0
...........................................................................................................................................................................................................................................................................................GGTTAAGTCCCGAAACGAGC................................................................................... 20 3 4 0.50 2 0 0 0 2 0 0
....................................................................................................GTGCCGGTCGGGGGACGG............................................................................................................................................................................................................................................................................ 18 2 2 0.50 1 0 0 1 0 0 0
..........................................................TAAGGTGGTCGCAGATGG...................................................................................................................................................................................................................................................................................................................... 18 2 2 0.50 1 0 1 0 0 0 0
.............................................................................................................................................................................................................................................................................GTGGAATAGGAAGAGGTGAA................................................................................................. 20 2 2 0.50 1 1 0 0 0 0 0
............................................................................................................................................................................................................................................................................................GTTAAGTCCCGAAACGAGCGC................................................................................. 21 3 3 0.33 1 0 0 0 1 0 0
..............................................GACGGTGAGCGTTGAGGT.................................................................................................................................................................................................................................................................................................................................. 18 2 3 0.33 1 1 0 0 0 0 0
........................................................................................................................................................................................................................................................................................AGGGGTGCAAACCTGAAAC....................................................................................... 19 2 3 0.33 1 0 0 0 0 1 0
...............................................AGGGTGATTGTTGAGGTGGGC.............................................................................................................................................................................................................................................................................................................................. 21 3 3 0.33 1 0 0 0 1 0 0
...........................................................................................................................................................................................................................................................................................GGTTAAGTCCTGCAACGAGC................................................................................... 20 3 4 0.25 1 0 0 1 0 0 0
..............................................................................................................................................................................................................................................CACACGGAACAGTGATAA.................................................................................................................................. 18 2 4 0.25 1 0 0 0 0 1 0
................GGACAAGAACTTCAAGATC............................................................................................................................................................................................................................................................................................................................................................... 19 1 4 0.25 1 1 0 0 0 0 0
............................................................................................................................................................................................................................................................................................GTGAAGTCCCGCAACGAGCG.................................................................................. 20 3 5 0.20 1 0 0 0 0 1 0
............................................................................................................................................................................................................................................................................................GTTAAGTCCCGAAACGAGC................................................................................... 19 3 10 0.20 2 0 0 0 2 0 0
...............................................................................................................................................................................................................................................................................GGAACAGGTACGGGTGAAGA............................................................................................... 20 3 6 0.17 1 0 0 0 0 1 0
.....................................................................................................................................................................................................................................................................................................................................................................GATGAGCGCGTGGGCTACG.......... 19 3 14 0.14 2 0 0 2 0 0 0
..................................................................................................................................TTCATGGCTCTCTCAGTCGC............................................................................................................................................................................................................................................ 20 3 8 0.13 1 1 0 0 0 0 0
............................................................................................................................................................................................................................................................................................GTTAAGTCCTGCAACGAGCG.................................................................................. 20 3 8 0.13 1 0 0 0 1 0 0
....................................................................................................................GGATGGAGGGTGACGACAGC.......................................................................................................................................................................................................................................................... 20 3 10 0.10 1 0 1 0 0 0 0
..................................................................................................................................GTTATGGCTCTCTCAGTCGC............................................................................................................................................................................................................................................ 20 3 10 0.10 1 0 0 0 1 0 0
..................................................................................................................................................................................................................................................CGTAACAGAGATAAAAAT.............................................................................................................................. 18 2 14 0.07 1 0 0 0 0 0 1
.......................................................TGGTAAGGTGGTCGCAGAT........................................................................................................................................................................................................................................................................................................................ 19 3 19 0.05 1 0 1 0 0 0 0
....................................................................................................................................................................................................................................................................................................................CTAATGTGTGCATTCTGTTG.......................................................... 20 3 20 0.05 1 0 0 0 1 0 0
...........................................................................................................................................................................................................................................................................................................................................................CGGCTACTTGGATGACAC..................... 18 3 20 0.05 1 1 0 0 0 0 0

Anti-sense strand reads

GCCTCGACGCCCGGCTCATGTTCTTGAAGTTCTAGAAGAAACAGGTGTGCCACTCACAACTCCACCAGCATCTACCACCTTTCTGACACCTTTCACGATCAACGGCCAACCCCCTGCCTACCTCCCACTGCAGTACCGACAGAGCCAGCGTGCGGGTGATTTTTCGGTAAACCCCCCGTGAAATACCGGGGCCGTGCACAACCGCTACTTTTGTTTAATTTACGCCGTAACTTTTGACGTGTGCGTTGTCTCTATTTTTCGCTGAACTTGACCTTATCCTTCCCCACTTCTGGACTTTGCTCGCGGTTGATTAAACACATAAGAAAACGTAACGTCGGTTTAGCGTGGATGATGAACCTACTGGGGCTCCCGATGCGGTAGGTGAC
******************************************************************************************************************************************************************************************************************************************************************.(((...((((((((..(((((......))).))..))))).)))....)))............**************************************************************** 		Read size # Mismatch Hit Count Total Norm Total V055
head
 V039
embryo
 V106
head
 M058
embryo
 M044
female body
.......................................................................................................................................CCGACAGTGCCAGCGTGC......................................................................................................................................................................................................................................... 18 1 1 1.00 1 1 0 0 0 0
................................................................................................................................TGCGGTACTGACAGAGCAAG.............................................................................................................................................................................................................................................. 20 3 4 0.25 1 0 1 0 0 0
..........................................................................................................................................................................................................................................................................................................................................................GGTCGATGAACCTACTGTGG.................... 20 3 8 0.25 2 0 0 2 0 0
.............................................................................................................................................GAGACAGCGTGCGGGTG.................................................................................................................................................................................................................................... 17 1 6 0.17 1 1 0 0 0 0
............................................................................................................................................AGAGACAGCGTGCGGGTGC................................................................................................................................................................................................................................... 19 2 7 0.14 1 1 0 0 0 0
...........................................................................................................................................CAGCGCCAGGCTGCGGGTG.................................................................................................................................................................................................................................... 19 3 8 0.13 1 1 0 0 0 0
........................................................TAACACCACCAGCATCTA........................................................................................................................................................................................................................................................................................................................ 18 2 10 0.10 1 0 1 0 0 0
...............................................................................................................................................................................................................................GCCGTTACTTGTGTCGTGTG............................................................................................................................................... 20 3 10 0.10 1 1 0 0 0 0
........................................................................................................................................................................................................ACCGCTTCTGTTGTTTAAT....................................................................................................................................................................... 19 2 11 0.09 1 0 1 0 0 0
........................................................................................................................................................................................................CCCGCTACTTTTTTTTAATTAA.................................................................................................................................................................... 22 3 14 0.07 1 0 0 0 1 0
...........................................................................................................................................................................................................................................................................................................................................................GCCGATGAACCTACTGTGG.................... 19 3 20 0.05 1 0 0 0 0 1
......................................................................................................................................................................................AAACCGGGGCAATGCACAA......................................................................................................................................................................................... 19 3 20 0.05 1 0 0 0 1 0
..............................................................................................................................................................................................................................................................................ACCTTATCGTTCCCCGCGT................................................................................................. 19 3 20 0.05 1 1 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droAna3 scaffold_13337:162731-163116 - dan_2310 CGGAGCTGCGGGCCGAGTACAAGAACTTCAAGATCTTCTTTGTCCACACGGTGAGTGTTG---AGGTGG-----------------------------------T--CGT----------------------------AGATGGTGG---------------------------------A---------------------------AAGAC-TGT-GGAAA----------GT---G--------CT--AG----TTGCCGGTTGGGGGACGGATGGAGGGTGACGTCATGGCTG---------------TC---TCGGTCGCACGCCCACT----------AAA-----AAG-----------------------------CCATTTGGGGGGCACTTTATGGC-CCCGGCACGTGTTGGCGA---------TGAAAACA-----------------------AATTAAATGCGGCATTGAAAACTGCACACGCAACAGAGATAAAAA--GCGACTT--GAACTGG-------------------------------------------------------------------------------AATAGGAAGGGGTGAAG---ACCTGAA----ACGAGC-----G----CCAACTAATTTGTGTATTCT--T----TTGCA----TTGCAGCCAAATCGCACCTACTACTTGGATGACCCCGAGGGCTACGCCATCCACTG
droBip1 scf7180000395155:598189-598569 + CAGAGCTGCGGGCCGAGTACAAGAACTTTAAGATCTTCTTTGTCCATACGGTAAGTGTCT---AGGGGG-----------------------------------T--CTC----------------------------CCATGGTGG---------------------------------T---------------------------A--AT-TGTAGGAAA----------GT---GCTGTGGTGGC--------------------------------GGTGACGTCATGGCTAGC------------------TTAGTCGCACGCCCACT----------AAA--CAAAAG-----------------------------CCATTCGAGGGGCACTTTATGGC-CCCGGCACGTGTTGGCGA---------TGAAAACA-----------------------AATTAAAAGCGGCATTGAGCACTGCACACGCAACACAGATAAAAAAATAGACTT--GAACTGG-----------------------------------------------------------------------GTGGTGGGAGTGG----GGGTGAAG---ACCTGAA----ACGAGT-----GCCAACCAACTAATTTGT--AT-AT--TTCTTCCTCG----TTGCAGCCAAATCGCACCTACTACCTGGACGATCCCGAGGGCTATGCCATTCACTG
droKik1 scf7180000301710:305231-305315 + AGG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAAAAA------C------------------------------------------------------------------------------------------------------------------------------------------TAACTAATTTTC------------TATTGCT----TTGCAGCCAAATCGCACCTACTACCTGGATGATCCCGAGGGCTATGCCATTCACTG
droFic1 scf7180000454105:267668-268086 - CCGAGCTGCGCGCCGAGTACAAGAATTTCAAGATCTTCTTTGTCCATACGGTAAGTGATTT----------------------------AAATTCCCCGCTGAA--TGAC----------------------------TTGGGGTTGTG---------TGTGA-GGG-GGCTTC-ACGG-------------------------------------A-AG--------------GAAGTTTGTCGAACC--------------------------------GGTGACATCAGAGCCAACA-----GC-TCCGTC--TCCAGTCGCACGCCCACT----------AAA-----AAA-----------------------------CCATTCGAGCGCCGGTTTATGGC-CCCGGCACGTGGTGGCGA---------TGAAAACA-----------------------AATTA-GTGCGGCATTGAAAACTGCACACGCAACGCAGATAAAAA------CTT--GAACTTGTCCG---------------------------------------------------------CGGGAACGCGACTATGGGAATGG----GGC-----------TGAGAGACCTTAGCA-AGAGCAAGAGAACTAATTTCC--CCTCTCC-TTCGTTCCA----TTGCAGCCAAATCGCACCTACTACCTGGACGATCCCGAGGGCTACGCCATCCACTG
droEle1 scf7180000491249:226350-226716 - CAGAGCTTCGTGCCGAGTACAAGAATTTCAAGATCTTCTTTGTTCACACGGTAAGTGTTTGCCAAGGGT------------------TT------------------------------------------------------TTGG-ATTAGGGAGGTACG-----------------------------------------------------GA-ATATCA----------TATGTTTGTTGATAC--------------------------------GATGACATCACAGCTAGTA-----GC-TCTGTC--TCTAGTC----GCCAACCAAAGCAAGACAAAAACAAAAA-----------------------------ACATTTGAGCGCCAGTTTATGGC-CCCGGCACGTGTTGGCGA---------TGAAAACA-----------------------AATTAAATGCGGCATTGAAAACTGCACACGCAACGAAGATAAT-------------------------------------------------------------------------------------------------------------------------------GATTATGGCGGAAAGC---TTAACCAATTTCC--CTTCTAT-TTTGCTTCA----TTGCAGCCAAATCGCACCTACTACCTGGACGATCCCGAGGGCTACGCCATCCACTG
droRho1 scf7180000762853:113415-113830 - CCGAGCTTCGTGCCGAGTACAAGAACTTTAAGATCTTTTTTGTCCACACGGTGAGTGTTTGCTAAGGGT------------------TT------------------------------------------------------TTGG-ATTACGGTTGTGTAA----GGGGTTAA-------------------------CCGTACAGACGGTCGGA-AGAACA----------CAAGTTTGTTGAACC--------------------------------GATGACATCACCGCTAGCA-----CT-TCTGTC--TCGAGTCGC-CACCTACA----------AAAAAACAACA-----------------------------ACATTTGAGCGACGGTTTATGGC-TCCGGCACGTGTTGGCGA---------TGAAAACA-----------------------AATTAAATGCGGCATTGAAAACTGCACACGCAACGCAGATAAAAA------CTT--AAACTTGCCCG------------------------------------------------------------------------GGGAATGT----GTT-----------TCAATGATTTCAACGAATAGC---CCAACTAATTTCT--GTTCTCG-TTTGTTCCA----TTGCAGCCAAATCGAACCTACTACTTGGACGATCCCGAGGGATACGCCATCCACTG
droBia1 scf7180000300910:220921-221341 - CAGATTTGCGGGCGGAGTACAAGAACTTCAAGATCTTCTTTGTTCACACGGTGAGTGCTTGCCAGGGAC------------------TTCA------------T--TTCC----------------------------CTACGGTGG-G-------------------GGGTT------------------------GAC----CCGGAAAAAGGAA-AGAAAA----------T-AGTTTGTTGAACC--GAC--------------------AACGAATGATGACATCACAGCTCTCA-----GC-TCCGTT--GCCTGTCGCACGCCCACT----------AAA-----CAG-----------------------------CAATTTGAGCGACAGTTTATGAC-CACGGCACGTGTTGGCGA---------TGAAAACA-----------------------AATTAAGTGCGGCATTGAAAACTGCACACGCAACACAGATAAAAA------CTT--AAACTTGTCCG------------------------------------------------------------------GACAATGGGAATGG----GGT-----------TGAGTGATTTTTGCCGAGAGC---CATACTAATTTCC--CTTCTCT-TTGGTTCCA----TTGCAGCCAAATCGCACCTACTACCTGGACGATCCCGAGGGCTACGCCATCCACTG
droTak1 scf7180000413899:114999-115364 - CCGACCTGCGGGCGGAGTACAAGAACTTTAAGATCTTCTTTGTGCACACGGTGAGT-----------------------------------------------------------------------------------------------AAGAA-----------------------------------------AAC----CCGGAAAAGCGAA-AGAAAA----------TAAGTTTCTTGAACC--AGC--------------------AAGCGGTGATGACATCACAAGCA--------------------ACAGCCACACGCCCACT----------AAA-----CAG-----------------------------TG-CTCAAATGCCAGTTTATGGC-TTCGGCACGTGTTGGCGA---------TGAAAACA-----------------------AATTAAATGCGGCATTGAAAACTGCACACGCAACGCAGATAAAAA------CTT--AAACTCGTAGC------------------------------------------------------------------------GGGAATGG----GGT-------T---TCAATGATTTTAGCG---------CCAACTAATTTGC--ATTCTCT-TCTTCTCGA----TTGCAGCCAAATCGCACCTACTACCTGGACGACCCCGAGGGCTATGCCATCCACTG
droEug1 scf7180000409184:199885-200296 - CCGATCTGCGAGCAGAGTACAAAAACTTCAAGATCTTCTTTGTCCACACGGTGAGTGTCTGCAAGGGGC------------------TT---------------------------------------------------TAGGTTA-GTTAAGGATTTCAGA----GAGGC-------------------------AAT----TCATAAAAACTAT-GGAAAA----------GAATTTCGCCTCACC--------------------------------GATGACATCACATATAGCA-----GCTTTCGTC--TCCAGTCGCACGCCCACT----------AAA-----AAG-----------------------------CATTTTGAGCACCAGTTTATGGC-CCCGGCACGTGTCGGCAA---------TGAAAACA-----------------------AATTAAATGCGGCATTGAAAACTGCACACGCAACGCAGATAAAAC------CTT--AAACTTGTCCG------------------------------------------------------------------------GGGAATGG----GGT-----------TGAATGATTTTAGTGGAGAGC---CAAACTAATTTCC--CTTCTCT-TTTGCTTTA----TTGCAGCCAAATCGCACCTATTACCTGGACGATCCGGAGGGCTACGCCATCCACTG
dm3 chr3L:143168-143564 + CAGATCTCCGAGCGGAGTACAAAAACTTCAAAATTTTTTTTGTCCATACGGTAAGTGTTT------------------------------------------------AC----------------------------CTATGGTGG-GATAAGGATGCACGA----GGCGC-------------------------AAC----TCGGAAAACCGAG-AAAGCA----------TAAGTTTGTTGAACC--------------------------------GATGACATCACAGCTTATA-----G--TTCGTA--GCCAGTCACACGCCTACT----------GAA-----AAG-----------------------------CAATTTGAGCGTTAGTTTATGTC-CCGGGCACGTGTTGGCTA---------TGAAAGCA-----------------------AATTAAATGCGGCATTGAAAACTGCACACGCAAGGCAGATAAAAA------CTC--AAACTTGTTTG------------------------------------------------------------------------GTGAATGG----GTT-----------TAAA----ATTAGCGTTGCGC---TCAACTAATTTT---ACTCT--TTTGGTTTCA----TTGCAGCCAAATCGAACCTATTACCTGGATGATCCCGAAGGCTATGCTATCCACTG
droSim2 3l:113455-113852 + dsi_3141 CAGATCTGCGAGCGGAGTACAAAAACTTCAAAATATTTTTTGTCCATACGGTAAGTGTTTGCT--------------------------------------------TAC----------------------------CTATGGTGG-GTTAAGGATGCACGA----GGCGC-------------------------AAC----TCGGAAAACCGAG-AAAGCA----------TAAGTTTGTTGAACC--------------------------------GATGACATCACAGCTTG----------TTTGTA--GCCTGTCGCACGCCCACT----------GAA-----AAG-----------------------------CAATTTGAGCGTCAGTTTATGTC-CCGGGCACGTGTTGGCTA---------TGAAAACA-----------------------AATTAAATGCGGCATTGAAAACTGCACACGCAAGGCAGATAAAAA------CTC--AAACTTGTCTG------------------------------------------------------------------------GTGAATGG----GGT-----------TAAA----ATTAGCGTTCCGC---TCAACTAATTTT---ACTCT--TTTGGTTTCA----TTGCAGCCAAATCGAACCTATTACCTGGATGATCCCGAAGGCTATGCTATCCACTG
droSec2 scaffold_2:162535-162932 + CAGATCTGCGAGCGGAGTACAAAAACTTCAAAATATTTTTTGTCCATACGGTAAGTGTTTGCT--------------------------------------------TAC----------------------------CTATGGTGG-GTTAAGGATGCACGA----GGCGC-------------------------AAC----TAGGAAAACCGAG-AAAGCA----------TAAGTTTGTTGAACC--------------------------------GATGACATCACAGCTTG----------TTTGTA--GCCTGTCGCACGCCCACT----------GAA-----AAG-----------------------------CAATTTGAGCGTCAGTTTATGTC-CCGGGCACGTGTTGGCTA---------TGAAAACA-----------------------AATTAAATGCGGCATTGAAAACTGCACACGCAAGGCAGATAAAAA------CTC--AAACTTGTCTG------------------------------------------------------------------------GTGAATGG----GGT-----------TAAA----ATTAGCGTTCCGC---TCAACTAATTTT---ACTCT--TTTGGTTTCA----TTGCAGCCAAATCGAACCTATTACCTGGATGATCCCGAAGGCTATGCTATCCACTG
droYak3 3L:113126-113529 + CAGATCTGCGAGCGGAGTACAAAAACTTCAAAATATTTTTTGTTCATACGGTAAGTGTTTGTT---------------------------G------------T--ATAC----------------------------CTATGGTGG-GTTAAGGATACACGA----GGGGC-------------------------AAC----GCGGAAATCCGAG-AAAGCA----------TAAGTTTGTTGAACC--------------------------------GATGACATCACAGTAAGT------GC-TTCGTT--GCCAGTCGCACGCCCACT----------GAA-----AAG-----------------------------CAATTTGAGCGTAATTTTATGCC-CCGGGCACGTGTTGGCTA---------TGAAAACA-----------------------AATTAAATGCGGCATTGAAAACTGCACACGCAAGGCAGATAAAAA------CTT--AAACTTGTCTG------------------------------------------------------------------------GTGAATGG----GGT-----------TAAA----TTTAGCGTTGCGC---TCAACTAATTTT---ATTCT--TTCGGTTCCA----TTGCAGCCAAATCGCACCTACTACCTGGATGATCCCGAAGGCTATGCAATCCACTG
droEre2 scaffold_4784:122584-122998 + CAGATCTGCGAGCGGAGTACAAAAACTTCAAAATATTTTTTGTCCATACGGTAGGTGGTTTTT------------------------TTTT------------T--TTAC----------------------------TTATGGTGGTGTTAAGGATGCACGA----GGGGC-------------------------AAC----TCGGAAATCCGAG-GAAGCA----------TAAGTTTGTTGAACC--------------------------------GATGACATCACAACTAGTGCTAGTGC-TTCGTC--GACAGTCGCACGCCCACT----------GAA-----AAG-----------------------------CAATTTGAGCGTCAGTTTATGCC-CCGGGCACGTGTTGGCTA---------TGAAAACA-----------------------AATTAAATGCGGCATTGAAAACTGCACACGCAAGGCAGATAAAAA------CTT--AAACTTGTCTG------------------------------------------------------------------------GTGAATGA----GGT-----------TAAA----TTTAGCGTTGCGC---TCAACTAATTTTT--TTTGT--TTTGGTTCCA----TTGCAGCCAAATCGCACCTACTACCTGGATGATCCCGAAGGCTATGCAATCCACTG
dp5 XR_group8:999053-999551 - dps_3228 CTGAACTGCGGGCCGAATACAAGAACTTTAAGATCTTCTTTGTCCATACGGTAAGTGTTG----------------------------------------------------------------------------------------------------TGG----GGCAC-A-ACGGGAAGGACTATGGGGCATAG------AGGGACAACCCCG-GAAGCATGCAATGCGAGAAGTTTGTTGAACT--AT----TCGCCGGCTGT------GCTGAGTGGTGACGTCACAGCC---------------------CCATTCACACGCCCACT----------AAAAAAAAAAG-----------------------------CCATTTGAGCGGCACTTTACGAC-TCCGGCACGTGTTGGCGA---------TGAAAACA-----------------------AATTAAATGCGGCATTGAAAACTGCACACGCAACACAGATAAAAG------CGAGAGAACTAGTCGGGGAAGTCGGGGCAGTGGCACTGCCACTGCCACTGCCACTGCCACTGCCACTGGCACT--------GGGCAATGGCAATGGCAGTGGGTGAATGTTTCCCAAT----TCGAGC-----GT---CTGACTAATCTCT--ATTCC--TTTTCCTCTACATTTTACAGCCGAGTCGCACCTACTACTTGGACGATCCCGAGGGCTATGCCATTCACTG
droPer2 scaffold_32:476133-476475 + GGGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------G---------------------------------------AACGTCACAGCC--------------------CCCATTCACACGCCCACTAAA-------AAAAAAAAAAG-----------------------------CCATTTGAGCGGCACTTTACGACTCCCGGCACGTGT-GGCGA---------TGAAAACA-----------------------AATTAAATGCGGCATTGAAAACTGCACACGCAACACAGATAAAAG------CGAGAGAACTAGTCGGGGAAGTCGGGGCAGTGGCACTGCCACTGCCACTGGCACTG-----GGCAATGGCAAT--------G-GCAATGGCAGTGGCAGTGGGTGAATGTTTCCCAAT----TCGAGC-----GT---CTGACTAATCTCT--ATTCC--TTTTCCTCTAAATTTTACAGCCGAGTCGCACCTACTACTTGGACGATCCCGAGGGCTATGCCATTCACTG
droWil2 scf2_1100000004540:2287778-2287922 + CGGT------------------------------------------------TAGTG-----------------------------------------------------------------------------------------G-ATGA------------------------------------------------ATGGATGGATGGATGGA-TG----------------------------------------------------------ACTGGTGGG----------------------------------------GTCCACT----------AAC--------------------------------------------AGAGTCGGTTTATGAC-CCAGGCACGTGTTTACGAGCCAAA---TGAAAACA-----------------------AATTAAATGCGGCATTGAAAACTGCACACGCAACGCAGATAAAAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droVir3 scaffold_13049:2784782-2785029 - --------------------------------ATTTTATTTGTGCGCATGTTG-TTGTTG----------------------------------------------TTGC----------------------------TGCTGTTG------------------------------CTG-------------------------------------T-TG--------------ACAGTTTGTTGAACC--AGCCAATTG-----------------AGTTGATGACGTCATCGTGTGCC-----AT-AAAGTTGCCCCAAGCACACGCTCGCA----------CT------AAT-----------------------------TCGTTTGGGC-CCAGTTTATAGC-AACGGCACGTGTTTACGACC-------CGACAACAACAACAACAACAACACACAACTCAATTATATGCGACATTGAAAAGTGCACACGCAACGTAGATAAAAA------CCA--AC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droMoj3 scaffold_6654:1124772-1125146 + CGGAGTTGCGAGCGGAGGTCAAGAACTTCAAGATCTTCTTCGTGCATACGGTAAATTGGTTTCTAGTATTTTATGCGGTATTTTTGTTGC--------------CGTTGCTGTCATTCCGCTTTTATTGGCTCTAGGCCTAT-TTAT-ATTGCTGTTGCTTGTGGCAGTCGC-A-GCTG-------------------------------------C-TG--------------ACAGTTTGTTGAACCGTAGC--------------------GACTAATGATGACGTCAAGTG---TC-----AT-AA----------------------------------AAAAAAGAACAACACCTACAAGCACACACACACATACAAAG-----AGGGTTCAGTTTATAGC-GACGGCACGTGTTTACGACC-GAACAACAACAACAACAACAACAACAATAAATAACTCAATTATATGCGACATTGAAAACTGCACACGCAACACAGATAAAAC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAA
droGri2 scaffold_15110:3755084-3755156 - T-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T---TCTGT--TTTTCTCTTT----TTACAGCCGAATCGCACCTATTATTTGGACGATCCCGAAGGCTATGCCATACAGTG

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droAna3
CGGAGCTGCGGGCCGAGTACAAGAACTTCAAGATCTTCTTTGTCCACACGGTGAGTGTTG---AGGTGG-----------------------------------T--CGT----------------------------AGATGGTGG---------------------------------A---------------------------AAGAC-TGT-GGAAA----------GT---G--------CT--AG----TTGCCGGTTGGGGGACGGATGGAGGGTGACGTCATGGCTG---------------TC---TCGGTCGCACGCCCACT----------AAA-----AAG-----------------------------CCATTTGGGGGGCACTTTATGGC-CCCGGCACGTGTTGGCGA---------TGAAAACA-----------------------AATTAAATGCGGCATTGAAAACTGCACACGCAACAGAGATAAAAA--GCGACTT--GAACTGG-------------------------------------------------------------------------------AATAGGAAGGGGTGAAG---ACCTGAA----ACGAGC-----G----CCAACTAATTTGTGTATTCT--T----TTGCA----TTGCAGCCAAATCGCACCTACTACTTGGATGACCCCGAGGGCTACGCCATCCACTGSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
...................................................................GG-----------------------------------T--CGT----------------------------AGATGGTGG---------------------------------A---------------------------AAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.002000002
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGACCCCGAGGGCTACGCCATC.....2411.001010000
..........................................................................................................................................................................................................................................................................GGGGGACGGATGGAGGGTG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000001
......................GAACTTCAAGATCTTCTTTGTC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000001
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCGCACCTACTACTTGGAT..........................2011.001010000
...............................................................................................................................................................................................................................................................................................................................................................................................................TTTATGGC-CCCGGCACGTGTTGGCG..................................................................................................................................................................................................................................................................................................................................2511.001000001
..........................................................................................................................................................................................................................................................................GGGGGACGGATGGAGGGTGAC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGAAG---ACCTGAA----ACGAGC-----.................................................................................................2011.001100000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCACCTACTACTTGGATGACCCCGAGGG...............2911.001010000
...................................................................................................................................................................................................................................................................................ATGGAGGGTGACGTCATGGCT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000010
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACCCCGAGGGCTACGCCATCCACTG2611.001100000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGGTGAAG---ACCTGAA----ACGAGC-----G----C...........................................................................................2411.001100000
...................................................................................................................................................................................................................................................................GCCGGTTGGGGGACGGATGGAGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTGG-------------------------------------------------------------------------------AATAGGAAGGGGTGAAG---ACC....................................................................................................................2511.001000010
...........................................................................................................................................................................................................................................................................GGGGACGGATGGAGGGTGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGACCCCGAGGGCTACGCCATCCACC.2811.001010000
.....................................................................................................................................................................................................................................................................................................GCTG---------------TC---TCGGTCGCACGCCC................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T--GAACTGG-------------------------------------------------------------------------------AATAGGAAGGGGTGAAG---A......................................................................................................................2611.001000010
................................ATCTTCTTTGTCCACACGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
........................ACTTCAAGATCTTCTTTGTCCACACGCCA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.001010000
................GTACAAGAACTTCAAGATC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001010000
droBip1
CAGAGCTGCGGGCCGAGTACAAGAACTTTAAGATCTTCTTTGTCCATACGGTAAGTGTCT---AGGGGG-----------------------------------T--CTC----------------------------CCATGGTGG---------------------------------T---------------------------A--AT-TGTAGGAAA----------GT---GCTGTGGTGGC--------------------------------GGTGACGTCATGGCTAGC------------------TTAGTCGCACGCCCACT----------AAA--CAAAAG-----------------------------CCATTCGAGGGGCACTTTATGGC-CCCGGCACGTGTTGGCGA---------TGAAAACA-----------------------AATTAAAAGCGGCATTGAGCACTGCACACGCAACACAGATAAAAAAATAGACTT--GAACTGG-----------------------------------------------------------------------GTGGTGGGAGTGG----GGGTGAAG---ACCTGAA----ACGAGT-----GCCAACCAACTAATTTGT--AT-AT--TTCTTCCTCG----TTGCAGCCAAATCGCACCTACTACCTGGACGATCCCGAGGGCTATGCCATTCACTGSizeHit CountTotal NormTotal
No Reads
droKik1
AGG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAAAAA------C------------------------------------------------------------------------------------------------------------------------------------------TAACTAATTTTC------------TATTGCT----TTGCAGCCAAATCGCACCTACTACCTGGATGATCCCGAGGGCTATGCCATTCACTGSizeHit CountTotal NormTotal
No Reads
droFic1
CCGAGCTGCGCGCCGAGTACAAGAATTTCAAGATCTTCTTTGTCCATACGGTAAGTGATTT----------------------------AAATTCCCCGCTGAA--TGAC----------------------------TTGGGGTTGTG---------TGTGA-GGG-GGCTTC-ACGG-------------------------------------A-AG--------------GAAGTTTGTCGAACC--------------------------------GGTGACATCAGAGCCAACA-----GC-TCCGTC--TCCAGTCGCACGCCCACT----------AAA-----AAA-----------------------------CCATTCGAGCGCCGGTTTATGGC-CCCGGCACGTGGTGGCGA---------TGAAAACA-----------------------AATTA-GTGCGGCATTGAAAACTGCACACGCAACGCAGATAAAAA------CTT--GAACTTGTCCG---------------------------------------------------------CGGGAACGCGACTATGGGAATGG----GGC-----------TGAGAGACCTTAGCA-AGAGCAAGAGAACTAATTTCC--CCTCTCC-TTCGTTCCA----TTGCAGCCAAATCGCACCTACTACCTGGACGATCCCGAGGGCTACGCCATCCACTGSizeHit CountTotal NormTotal
No Reads
droEle1
CAGAGCTTCGTGCCGAGTACAAGAATTTCAAGATCTTCTTTGTTCACACGGTAAGTGTTTGCCAAGGGT------------------TT------------------------------------------------------TTGG-ATTAGGGAGGTACG-----------------------------------------------------GA-ATATCA----------TATGTTTGTTGATAC--------------------------------GATGACATCACAGCTAGTA-----GC-TCTGTC--TCTAGTC----GCCAACCAAAGCAAGACAAAAACAAAAA-----------------------------ACATTTGAGCGCCAGTTTATGGC-CCCGGCACGTGTTGGCGA---------TGAAAACA-----------------------AATTAAATGCGGCATTGAAAACTGCACACGCAACGAAGATAAT-------------------------------------------------------------------------------------------------------------------------------GATTATGGCGGAAAGC---TTAACCAATTTCC--CTTCTAT-TTTGCTTCA----TTGCAGCCAAATCGCACCTACTACCTGGACGATCCCGAGGGCTACGCCATCCACTGSizeHit CountTotal NormTotal
No Reads
droRho1
CCGAGCTTCGTGCCGAGTACAAGAACTTTAAGATCTTTTTTGTCCACACGGTGAGTGTTTGCTAAGGGT------------------TT------------------------------------------------------TTGG-ATTACGGTTGTGTAA----GGGGTTAA-------------------------CCGTACAGACGGTCGGA-AGAACA----------CAAGTTTGTTGAACC--------------------------------GATGACATCACCGCTAGCA-----CT-TCTGTC--TCGAGTCGC-CACCTACA----------AAAAAACAACA-----------------------------ACATTTGAGCGACGGTTTATGGC-TCCGGCACGTGTTGGCGA---------TGAAAACA-----------------------AATTAAATGCGGCATTGAAAACTGCACACGCAACGCAGATAAAAA------CTT--AAACTTGCCCG------------------------------------------------------------------------GGGAATGT----GTT-----------TCAATGATTTCAACGAATAGC---CCAACTAATTTCT--GTTCTCG-TTTGTTCCA----TTGCAGCCAAATCGAACCTACTACTTGGACGATCCCGAGGGATACGCCATCCACTGSizeHit CountTotal NormTotal
No Reads
droBia1
CAGATTTGCGGGCGGAGTACAAGAACTTCAAGATCTTCTTTGTTCACACGGTGAGTGCTTGCCAGGGAC------------------TTCA------------T--TTCC----------------------------CTACGGTGG-G-------------------GGGTT------------------------GAC----CCGGAAAAAGGAA-AGAAAA----------T-AGTTTGTTGAACC--GAC--------------------AACGAATGATGACATCACAGCTCTCA-----GC-TCCGTT--GCCTGTCGCACGCCCACT----------AAA-----CAG-----------------------------CAATTTGAGCGACAGTTTATGAC-CACGGCACGTGTTGGCGA---------TGAAAACA-----------------------AATTAAGTGCGGCATTGAAAACTGCACACGCAACACAGATAAAAA------CTT--AAACTTGTCCG------------------------------------------------------------------GACAATGGGAATGG----GGT-----------TGAGTGATTTTTGCCGAGAGC---CATACTAATTTCC--CTTCTCT-TTGGTTCCA----TTGCAGCCAAATCGCACCTACTACCTGGACGATCCCGAGGGCTACGCCATCCACTGSizeHit CountTotal NormTotal
No Reads
droTak1
CCGACCTGCGGGCGGAGTACAAGAACTTTAAGATCTTCTTTGTGCACACGGTGAGT-----------------------------------------------------------------------------------------------AAGAA-----------------------------------------AAC----CCGGAAAAGCGAA-AGAAAA----------TAAGTTTCTTGAACC--AGC--------------------AAGCGGTGATGACATCACAAGCA--------------------ACAGCCACACGCCCACT----------AAA-----CAG-----------------------------TG-CTCAAATGCCAGTTTATGGC-TTCGGCACGTGTTGGCGA---------TGAAAACA-----------------------AATTAAATGCGGCATTGAAAACTGCACACGCAACGCAGATAAAAA------CTT--AAACTCGTAGC------------------------------------------------------------------------GGGAATGG----GGT-------T---TCAATGATTTTAGCG---------CCAACTAATTTGC--ATTCTCT-TCTTCTCGA----TTGCAGCCAAATCGCACCTACTACCTGGACGACCCCGAGGGCTATGCCATCCACTGSizeHit CountTotal NormTotal
No Reads
droEug1
CCGATCTGCGAGCAGAGTACAAAAACTTCAAGATCTTCTTTGTCCACACGGTGAGTGTCTGCAAGGGGC------------------TT---------------------------------------------------TAGGTTA-GTTAAGGATTTCAGA----GAGGC-------------------------AAT----TCATAAAAACTAT-GGAAAA----------GAATTTCGCCTCACC--------------------------------GATGACATCACATATAGCA-----GCTTTCGTC--TCCAGTCGCACGCCCACT----------AAA-----AAG-----------------------------CATTTTGAGCACCAGTTTATGGC-CCCGGCACGTGTCGGCAA---------TGAAAACA-----------------------AATTAAATGCGGCATTGAAAACTGCACACGCAACGCAGATAAAAC------CTT--AAACTTGTCCG------------------------------------------------------------------------GGGAATGG----GGT-----------TGAATGATTTTAGTGGAGAGC---CAAACTAATTTCC--CTTCTCT-TTTGCTTTA----TTGCAGCCAAATCGCACCTATTACCTGGACGATCCGGAGGGCTACGCCATCCACTGSizeHit CountTotal NormTotal
No Reads
dm3
CAGATCTCCGAGCGGAGTACAAAAACTTCAAAATTTTTTTTGTCCATACGGTAAGTGTTT------------------------------------------------AC----------------------------CTATGGTGG-GATAAGGATGCACGA----GGCGC-------------------------AAC----TCGGAAAACCGAG-AAAGCA----------TAAGTTTGTTGAACC--------------------------------GATGACATCACAGCTTATA-----G--TTCGTA--GCCAGTCACACGCCTACT----------GAA-----AAG-----------------------------CAATTTGAGCGTTAGTTTATGTC-CCGGGCACGTGTTGGCTA---------TGAAAGCA-----------------------AATTAAATGCGGCATTGAAAACTGCACACGCAAGGCAGATAAAAA------CTC--AAACTTGTTTG------------------------------------------------------------------------GTGAATGG----GTT-----------TAAA----ATTAGCGTTGCGC---TCAACTAATTTT---ACTCT--TTTGGTTTCA----TTGCAGCCAAATCGAACCTATTACCTGGATGATCCCGAAGGCTATGCTATCCACTGSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
......TCCGAGCGGAGTACAAAAACTTCAAAA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2714.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAATTTT---ACTCT--TTTGGTTTCA----TTGCAG..................................................2814.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000100
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACCTGGATGATCCCGAAGGCTATGC.........2614.0040000000000000000000000000000000000000001000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGATGATCCCGAAGGCTATG..........2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
.....................AAAACTTCAAAATTTTTTTTGTC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2313.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGATCCCGAAGGCTATGCT........2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100001000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T---ACTCT--TTTGGTTTCA----TTGCAG..................................................2213.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000100100000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGATGATCCCGAAGGCTATGC.........2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000
............................................................................................................AC----------------------------CTATGGTGG-GATAAGGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................ACT----------GAA-----AAG-----------------------------CAATTTGAGCGTT..............................................................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGGATGATCCCGAAGGCT.............1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................GCACGA----GGCGC-------------------------AAC----TCGGAAAACC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTACCTGGATGATCCCGAAGGCTATGC.........2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCTGGATGATCCCGAAGGCT.............2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCT--TTTGGTTTCA----TTGCAG..................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGGATGATCCCGAAGGCTATGCTATC.....2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CT--TTTGGTTTCA----TTGCAG..................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACCTGGATGATCCCGAAGGCTATGCTA.......2812.0020000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCTGGATGATCCCGAAGG...............1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......TCCGAGCGGAGTACAAAAACTTCAAAATT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2912.0020000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCT--TTTGGTTTCA----TTGCAG..................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCTGGATGATCCCGAAGGCTATGCT........2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGATGATCCCGAAGGCTATGCTAT......2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGATGATCCCGAAGGCTATGCTATC.....2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......CCGAGCGGAGTACAAAAACTT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGATCCCGAAGGCTATGCTATCCACT.2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................C----------------------------CTATGGTGG-GATAAGGATGCACG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G------------------------------------------------------------------------GTGAATGG----GTT-----------TAAA----ATTAGCG.....................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATTACCTGGATGATCCCGAAGGC..............2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........CGAGCGGAGTACAAAAACTTCA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGATGATCCCGAAGGCTATGCT........2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
......................................................................................................................................................................................................................................................................................................................................CGCCTACT----------GAA-----AAG-----------------------------CAATTTGAGCGTTA.............................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTG------------------------------------------------------------------------GTGAATGG----GTT-----------TAAA----ATTAG.......................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
......TCCGAGCGGAGTACAAAAAC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAACTTGTTTG------------------------------------------------------------------------GTGAATGG----GT................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCTGGATGATCCCGAAGGCTATG..........2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTACCTGGATGATCCCGAAGGC..............2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................GGGCACGTGTTGGCTA---------TGAAAGCA-----------------------A........................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACCTGGATGATCCCGAAGGCTAACG.........2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTACCTGGATGATCCCGAAGGCTAT...........2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCA----TTGCAGCCAAATCGAAC.......................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGAATGG----GTT-----------TAAA----ATTAGC......................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGAACCTATTACCTGGATGA........................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....TCTCCGAGCGGAGTACAAAAACTTCAAAAT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTT---ACTCT--TTTGGTTTCA----TTG.....................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTACCTGGATGATCCCGAAGGC..............2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGATCCCGAAGGCTATGCTA.......2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
..........................................................................................................................................................GATGCACGA----GGCGC-------------------------AAC----TC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGATCCCGAAGGCTATG..........1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................TTATGTC-CCGGGCACGTGTTGGCT..................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGATCCCGAAGGCTATGCTATC.....2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTACCTGGATGATCCCGAAGGCT.............2311.0010000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................ATAAGGATGCACGA----GGCGC-------------------------AAC----TCG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCCCGAAGGCTATGCTATCC....2111.0010000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................A----GGCGC-------------------------AAC----TCGGAAAACCGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
.........................................................................................................................................................GGATGCACGA----GGCGC-------------------------AAC----TCG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................TGCACGA----GGCGC-------------------------AAC----TCG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAACCTATTACCTGGATG.........................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................CAAAAACTTCAAAATTTTT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTACCTGGATGATCCCGAAGGCTAT...........2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACTTGTTTG------------------------------------------------------------------------GTGAATGG----G.................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................TC-CCGGGCACGTGTTGGCTA---------TGA.....................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTT---ACTCT--TTTGGTTTCA----TTGCAG..................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TT---ACTCT--TTTGGTTTCA----TTGCA...................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
........CGAGCGGAGTACAAAAACTTCAAA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGGATGATCCCGAAGGCTATA..........2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGATGATCCCGAAGGCTATGCTATC.....2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTACCTGGATGATCCCGAAGGCT.............2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATCGAACCTATTACCTGGAT..........................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A------CTC--AAACTTGTTTG------------------------------------------------------------------------GTGAATGG----GT................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G----GTT-----------TAAA----ATTAGCGTTGCG................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
......................................................................................................................................................................................................................................................ACC--------------------------------GATGACATCACAGCTTATA-----..........................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
...................................TTTTTTGTCCATACGGTAAGTG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGATGATCCCGAAGGCTATGCTAT......2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACGCAAGGCAGATAAAAA------CTC--AAA..............................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...ATCTCCGAGCGGAGTACAAAAACT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
CAGATCTCCGAGCGGAGTACAAAA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGTTTG------------------------------------------------------------------------GTGAATGG----GTT-----------TAAA----ATTAGC......................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACCTATTACCTGGATGATCCCGAAGGC..............2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
CAGATCTGCGAGCGGAGTACAAAAACTTCAAAATATTTTTTGTCCATACGGTAAGTGTTTGCT--------------------------------------------TAC----------------------------CTATGGTGG-GTTAAGGATGCACGA----GGCGC-------------------------AAC----TCGGAAAACCGAG-AAAGCA----------TAAGTTTGTTGAACC--------------------------------GATGACATCACAGCTTG----------TTTGTA--GCCTGTCGCACGCCCACT----------GAA-----AAG-----------------------------CAATTTGAGCGTCAGTTTATGTC-CCGGGCACGTGTTGGCTA---------TGAAAACA-----------------------AATTAAATGCGGCATTGAAAACTGCACACGCAAGGCAGATAAAAA------CTC--AAACTTGTCTG------------------------------------------------------------------------GTGAATGG----GGT-----------TAAA----ATTAGCGTTCCGC---TCAACTAATTTT---ACTCT--TTTGGTTTCA----TTGCAGCCAAATCGAACCTATTACCTGGATGATCCCGAAGGCTATGCTATCCACTGSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
................GTACAAAAACTTCAAAATATTTTTT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100010000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................GGGCACGTGTTGGCTA---------TGA.....................................................................................................................................................................................................................................................................................................................1911.00100000100000000000
.........................................................................................................................................................................................................................................................................................................................A--GCCTGTCGCACGCCCACT----------...................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100000000000100000
...........................................................TGCT--------------------------------------------TAC----------------------------CTATGGTGG-GTTA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100010000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAA------CTC--AAACTTGTCTG------------------------------------------------------------------------GTGA..........................................................................................................................................2211.00100010000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCTATTACCTGGATGATCCCGAAGGCT.............2811.00100010000000000000
.........................................................................................................................................................GGATGCACGA----GGCGC-------------------------AAC----TCG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000000000100000
................................................................................................................................................................................................................................................TGTTGAACC--------------------------------GATGACATCACAGCT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100100000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAATCGAACCTATTACCTGGAT..........................2311.00100010000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGCAGCCAAATCGA.........................................15120.08100000000001000000
droSec2
CAGATCTGCGAGCGGAGTACAAAAACTTCAAAATATTTTTTGTCCATACGGTAAGTGTTTGCT--------------------------------------------TAC----------------------------CTATGGTGG-GTTAAGGATGCACGA----GGCGC-------------------------AAC----TAGGAAAACCGAG-AAAGCA----------TAAGTTTGTTGAACC--------------------------------GATGACATCACAGCTTG----------TTTGTA--GCCTGTCGCACGCCCACT----------GAA-----AAG-----------------------------CAATTTGAGCGTCAGTTTATGTC-CCGGGCACGTGTTGGCTA---------TGAAAACA-----------------------AATTAAATGCGGCATTGAAAACTGCACACGCAAGGCAGATAAAAA------CTC--AAACTTGTCTG------------------------------------------------------------------------GTGAATGG----GGT-----------TAAA----ATTAGCGTTCCGC---TCAACTAATTTT---ACTCT--TTTGGTTTCA----TTGCAGCCAAATCGAACCTATTACCTGGATGATCCCGAAGGCTATGCTATCCACTGSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
........................................TGTCCATACGGTAAGTGTTTGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010010
.........................................................................................................................................................................................................................................................................................................................................................................................................................CGGGCACGTGTTGGCTA---------TGAA....................................................................................................................................................................................................................................................................................................................2111.0010010
....................................................................................................................................................................................................................................................................................................................TTTGTA--GCCTGTCGCACGCCCA...............................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010010
..................................................................................................................................................................................................................AACCGAG-AAAGCA----------TAAGTT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010010
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTTGTCTG------------------------------------------------------------------------GTGAATGG----GGT-----------....................................................................................................................2011.0010010
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCTATTACCTGGATGATCCCGAAGGCT.............2811.0010100
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGATGATCCCGAAGGCTAT...........1911.0010010
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C--AAACTTGTCTG------------------------------------------------------------------------GTGAATGG----..................................................................................................................................2011.0010010
droYak3
CAGATCTGCGAGCGGAGTACAAAAACTTCAAAATATTTTTTGTTCATACGGTAAGTGTTTGTT---------------------------G------------T--ATAC----------------------------CTATGGTGG-GTTAAGGATACACGA----GGGGC-------------------------AAC----GCGGAAATCCGAG-AAAGCA----------TAAGTTTGTTGAACC--------------------------------GATGACATCACAGTAAGT------GC-TTCGTT--GCCAGTCGCACGCCCACT----------GAA-----AAG-----------------------------CAATTTGAGCGTAATTTTATGCC-CCGGGCACGTGTTGGCTA---------TGAAAACA-----------------------AATTAAATGCGGCATTGAAAACTGCACACGCAAGGCAGATAAAAA------CTT--AAACTTGTCTG------------------------------------------------------------------------GTGAATGG----GGT-----------TAAA----TTTAGCGTTGCGC---TCAACTAATTTT---ATTCT--TTCGGTTCCA----TTGCAGCCAAATCGCACCTACTACCTGGATGATCCCGAAGGCTATGCAATCCACTGSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T---ATTCT--TTCGGTTCCA----TTGC....................................................2011.00100000100000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCACCTACTACCTGGATGATCCC....................2411.00101000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTACCTGGATGATCCCGAAGGCT.............2411.00101000000000
.............................................................................................................................................................................................................................GCA----------TAAGTTTGTTGAACC--------------------------------GAT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000010000
droEre2
CAGATCTGCGAGCGGAGTACAAAAACTTCAAAATATTTTTTGTCCATACGGTAGGTGGTTTTT------------------------TTTT------------T--TTAC----------------------------TTATGGTGGTGTTAAGGATGCACGA----GGGGC-------------------------AAC----TCGGAAATCCGAG-GAAGCA----------TAAGTTTGTTGAACC--------------------------------GATGACATCACAACTAGTGCTAGTGC-TTCGTC--GACAGTCGCACGCCCACT----------GAA-----AAG-----------------------------CAATTTGAGCGTCAGTTTATGCC-CCGGGCACGTGTTGGCTA---------TGAAAACA-----------------------AATTAAATGCGGCATTGAAAACTGCACACGCAAGGCAGATAAAAA------CTT--AAACTTGTCTG------------------------------------------------------------------------GTGAATGA----GGT-----------TAAA----TTTAGCGTTGCGC---TCAACTAATTTTT--TTTGT--TTTGGTTCCA----TTGCAGCCAAATCGCACCTACTACCTGGATGATCCCGAAGGCTATGCAATCCACTGSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGATGATCCCGAAGGCTATGCAATCCACA.3014.0040000004
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGATGATCCCGAAGGCTATGCA........2313.0031000200
.....................AAAACTTCAAAATATTTTTTGT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000010
..GATCTGCGAGCGGAGTACA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0011000000
...ATCTGCGAGCGGAGTACAAA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000100
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTT--TTTGT--TTTGGTTCCA----TTGCAG..................................................2511.0010000010
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTACCTGGATGATCCCGAAGGCTATGCA........2911.0010000100
.....CTGCGAGCGGAGTACAAAAAC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000100
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCACCTACTACCTGGATGATCCCG...................2511.0011000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCCCGAAGGCTATGCAATCCACT.2411.0010000100
dp5
CTGAACTGCGGGCCGAATACAAGAACTTTAAGATCTTCTTTGTCCATACGGTAAGTGTTG----------------------------------------------------------------------------------------------------TGG----GGCAC-A-ACGGGAAGGACTATGGGGCATAG------AGGGACAACCCCG-GAAGCATGCAATGCGAGAAGTTTGTTGAACT--AT----TCGCCGGCTGT------GCTGAGTGGTGACGTCACAGCC---------------------CCATTCACACGCCCACT----------AAAAAAAAAAG-----------------------------CCATTTGAGCGGCACTTTACGAC-TCCGGCACGTGTTGGCGA---------TGAAAACA-----------------------AATTAAATGCGGCATTGAAAACTGCACACGCAACACAGATAAAAG------CGAGAGAACTAGTCGGGGAAGTCGGGGCAGTGGCACTGCCACTGCCACTGCCACTGCCACTGCCACTGGCACT--------GGGCAATGGCAATGGCAGTGGGTGAATGTTTCCCAAT----TCGAGC-----GT---CTGACTAATCTCT--ATTCC--TTTTCCTCTACATTTTACAGCCGAGTCGCACCTACTACTTGGACGATCCCGAGGGCTATGCCATTCACTGSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTGGACGATCCCGAGGGCTATGCCA.......2611.0010100000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCACCTACTACTTGGACG.........................1911.0010100000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCTACTACTTGGACGATCCCGAGGGC..............2711.0010100000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACCTACTACTTGGACGATCCC....................2311.0010100000000
......................GAACTTTAAGATCTTCTTTGT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAATGGCAATGGCAGTGGGT..............................................................................................................................2011.0010100000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGACGATCCCGAGGGCTATGC.........2211.0010100000000
......................GAACTTTAAGATCTTCTTTGTC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATCTCT--ATTCC--TTTTCCTC..............................................................2011.0010100000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACTACTTGGACGATCCCGAGGGCTAT...........2711.0010010000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAATGGCAATGGCAGTGGGTGA............................................................................................................................2211.0010100000000
...............................GATCTTCTTTGTCCATACG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
......................GAACTTTAAGATCTTCTTTGTCCATAC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010100000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTACTTGGACGATCCCGAGGGC..............2211.0010100000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTACTTGGACGATCCCGAGGGCTA............2411.0010100000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAATGGCAATGGCAGTGGG...............................................................................................................................2030.3310100000000
droPer2
GGGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------G---------------------------------------AACGTCACAGCC--------------------CCCATTCACACGCCCACTAAA-------AAAAAAAAAAG-----------------------------CCATTTGAGCGGCACTTTACGACTCCCGGCACGTGT-GGCGA---------TGAAAACA-----------------------AATTAAATGCGGCATTGAAAACTGCACACGCAACACAGATAAAAG------CGAGAGAACTAGTCGGGGAAGTCGGGGCAGTGGCACTGCCACTGCCACTGGCACTG-----GGCAATGGCAAT--------G-GCAATGGCAGTGGCAGTGGGTGAATGTTTCCCAAT----TCGAGC-----GT---CTGACTAATCTCT--ATTCC--TTTTCCTCTAAATTTTACAGCCGAGTCGCACCTACTACTTGGACGATCCCGAGGGCTATGCCATTCACTGSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCACCTACTACTTGGAC..........................18110.00101000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCGCACCTACTACTTGGAC..........................2015.005500000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACCTACTACTTGGACG.........................1814.004400000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCACCTACTACTTGGACG.........................1911.001100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTGGACGATCCCGAGGGCTA............2111.001010000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGCAGTGGCAGTGGGTGAATGTT.......................................................................................................................2411.001010000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCGCACCTACTACTTGGACG.........................2111.001100000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G------CGAGAGAACTAGTCGGGGAAGTCGGGG...........................................................................................................................................................................................................2811.001000001
droWil2
CGGT------------------------------------------------TAGTG-----------------------------------------------------------------------------------------G-ATGA------------------------------------------------ATGGATGGATGGATGGA-TG----------------------------------------------------------ACTGGTGGG----------------------------------------GTCCACT----------AAC--------------------------------------------AGAGTCGGTTTATGAC-CCAGGCACGTGTTTACGAGCCAAA---TGAAAACA-----------------------AATTAAATGCGGCATTGAAAACTGCACACGCAACGCAGATAAAAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
........................................................................................................................................................................................................................................................................................................................................................AAC--------------------------------------------AGAGTCGGTTTATGAC-CCA................................................................................................................................................................................................................................................................................................................................................2211.00100001
..............................................................................................................................................................................................................GGATGGATGGA-TG----------------------------------------------------------ACTGGTGGG----------------------------------------GT..................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100001
.....................................................................................................................................................................................................................................................................................................................................................................................................................................TACGAGCCAAA---TGAAAACA-----------------------A........................................................................................................................................................................................................................................................................................2011.00100001
................................................................................................................................................................................................................ATGGATGGA-TG----------------------------------------------------------ACTGGTGGG----------------------------------------GTCCACT----------...................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100010
.......................................................................................................................................................A------------------------------------------------ATGGATGGATGGATGGA-TG----------------------------------------------------------.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.15300003
......................................................................................................................................................GA------------------------------------------------ATGGATGGATGGATGGA-T................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.05100100
.......................................................................................................................................................A------------------------------------------------ATGGATGGATGGATGGA-T................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.05100100
.....................................................................................................................................................TGA------------------------------------------------ATGGATGGATGGATGGA-T................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05100001
droVir3
--------------------------------ATTTTATTTGTGCGCATGTTG-TTGTTG----------------------------------------------TTGC----------------------------TGCTGTTG------------------------------CTG-------------------------------------T-TG--------------ACAGTTTGTTGAACC--AGCCAATTG-----------------AGTTGATGACGTCATCGTGTGCC-----AT-AAAGTTGCCCCAAGCACACGCTCGCA----------CT------AAT-----------------------------TCGTTTGGGC-CCAGTTTATAGC-AACGGCACGTGTTTACGACC-------CGACAACAACAACAACAACAACACACAACTCAATTATATGCGACATTGAAAAGTGCACACGCAACGTAGATAAAAA------CCA--AC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.................................................................................................................................................................................................................................................GTTGAACC--AGCCAATTG-----------------AGTTGATGACGTC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................3011.001000000000000000000000000000000000000000000000000000000000010000
...................................................................................................................................................................................................................................................TGAACC--AGCCAATTG-----------------AGTTG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................G-------------------------------------T-TG--------------ACAGTTTGTTGAACC--AGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000100000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTATATGCGACATTGAAAAGTGCA...............................................................................................................................................................................................................................................................2411.001000000000000000001000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAACAACAACAACAACAC................................................................................................................................................................................................................................................................................................21200.051000000000000000000100000000000000000000000000000000000000000000
...............................................ATGTTG-TTGTTG----------------------------------------------TTGC----------------------------TGCT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051000000000000000000000000000000000000000000000000000000000000001
droMoj3
CGGAGTTGCGAGCGGAGGTCAAGAACTTCAAGATCTTCTTCGTGCATACGGTAAATTGGTTTCTAGTATTTTATGCGGTATTTTTGTTGC--------------CGTTGCTGTCATTCCGCTTTTATTGGCTCTAGGCCTAT-TTAT-ATTGCTGTTGCTTGTGGCAGTCGC-A-GCTG-------------------------------------C-TG--------------ACAGTTTGTTGAACCGTAGC--------------------GACTAATGATGACGTCAAGTG---TC-----AT-AA----------------------------------AAAAAAGAACAACACCTACAAGCACACACACACATACAAAG-----AGGGTTCAGTTTATAGC-GACGGCACGTGTTTACGACC-GAACAACAACAACAACAACAACAACAATAAATAACTCAATTATATGCGACATTGAAAACTGCACACGCAACACAGATAAAAC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
..GAGTTGCGAGCGGAGGTCAAGAACT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001100000
CGGAGTTGCGAGCGGAGGTCA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
droGri2
T-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T---TCTGT--TTTTCTCTTT----TTACAGCCGAATCGCACCTATTATTTGGACGATCCCGAAGGCTATGCCATACAGTGSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/18/2015 at 04:16 AM