ID:

dan_231

 Coordinate:

scaffold_13417:2460713-2460805 -

 Confidence:

confident

 Class:

Testes-restricted

 Genomic Locale:

antisense_to_CDS

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-26.1 -26.1 -26.1

Flybase annnotation

Antisense to CDS [Dana\GF20485-cds]; Antisense to intron [Dana\GF20485-in]; Antisense to CDS [Dana\GF20485-cds]

No Repeatable elements found

Sense Strand Reads

AGGACGATCCAGGCGGTGCAATAGCGGGGATCACTTTGGGTCGGCCAGCGATTGTTGTAGCTAAACTGGAACTCGTTTCTCAGCTGTCATATACATTCGATAGCTATAACAGTGAGGATGGGGTTTCTGGATTAAGTGCAATGGTATTACGGGCCGACCACTGTGACTGGGTCCCACCGTGAAGTGGGTGCGG

***************************************************..((((((..(((.(((((((((..((((((((((((..........))))))........))))))..))).)))))).)))..)))))).************************************************** 		Read size # Mismatch Hit Count Total Norm Total V105

male body		 M044

female body

 V055

head

 V106

head

 M058

embryo

 V039

embryo
..................................................................TGGAACTCGTTTCTCAGCTGTCA........................................................................................................ 23 0 1 549.00 549 418 87 32 10 1 1
..................................................................TGGAACTCGTTTCTCAGCTGTC......................................................................................................... 22 0 1 66.00 66 47 12 5 2 0 0
..........................................................................................................TAACAGTGAGGATGGGGTTTCT................................................................. 22 0 1 24.00 24 13 3 2 6 0 0
..................................................................TGGAACTCGTTTCTCAGCTGTCT........................................................................................................ 23 1 1 19.00 19 16 0 3 0 0 0
..................................................................TGGAACTCGTTTCTCAGCTGT.......................................................................................................... 21 0 1 9.00 9 6 3 0 0 0 0
..........................................................................................................TAACAGTGAGGATGGGGTTTCTG................................................................ 23 0 1 9.00 9 3 2 2 2 0 0
..........................................................................................................TAACAGTGAGGATGGGGTT.................................................................... 19 0 1 8.00 8 5 0 1 2 0 0
............................................................................................................ACAGTGAGGATGGGGTTTCTGG............................................................... 22 0 1 7.00 7 5 1 0 1 0 0
...........................................................................................................AACAGTGAGGATGGGGTTTCTG................................................................ 22 0 1 6.00 6 2 2 0 2 0 0
..................................................................TGGAACTCGTTTCTCAGCTGACA........................................................................................................ 23 1 1 6.00 6 6 0 0 0 0 0
............................................................................................................ACAGTGAGGATGGGGTTTCTG................................................................ 21 0 1 6.00 6 4 2 0 0 0 0
...........................................................................................................AACAGTGAGGATGGGGTTTCT................................................................. 21 0 1 5.00 5 2 1 0 2 0 0
..........................................................................................................TAACAGTGAGGATGGGGTTTCTGG............................................................... 24 0 1 5.00 5 2 0 1 2 0 0
..................................................................TGGAACTCGTTTATCAGCTGTCA........................................................................................................ 23 1 1 4.00 4 4 0 0 0 0 0
..............................................................................................................AGTGAGGATGGGGTTTCTGGAT............................................................. 22 0 1 4.00 4 4 0 0 0 0 0
..........................................................................................................TAACAGTGAGGATGGGGTTTC.................................................................. 21 0 1 4.00 4 3 0 0 1 0 0
..................................................................TGGAACTCGTTTCTCAGCTGCCA........................................................................................................ 23 1 1 4.00 4 4 0 0 0 0 0
............................................................................................................ACAGTGAGGATGGGGTTTCTGGA.............................................................. 23 0 1 4.00 4 1 0 0 3 0 0
..................................................................TGGAACTCGTTTCTCATCTGTCA........................................................................................................ 23 1 1 4.00 4 4 0 0 0 0 0
...............................................................AACTGGAACTCGTTTCTCAGCT............................................................................................................ 22 0 1 4.00 4 1 2 1 0 0 0
...........................................................................................................AACAGTGAGGATGGGGTTTCTGG............................................................... 23 0 1 3.00 3 3 0 0 0 0 0
..........................................................................................................TAACAGTGAGGATGGGGTTTCTTT............................................................... 24 2 1 3.00 3 1 0 0 2 0 0
...................................................................GGAACTCGTTTCTCAGCTGTCA........................................................................................................ 22 0 1 3.00 3 0 3 0 0 0 0
..................................................................TGGAACTCTTTTCTCAGCTGTCA........................................................................................................ 23 1 1 3.00 3 2 0 0 1 0 0
..............................................................................................................AGTGAGGATGGGGTTTCTGG............................................................... 20 0 1 3.00 3 1 0 2 0 0 0
..........................................................................................................TAACAGTGAGGATGGGGTTTCTT................................................................ 23 1 1 3.00 3 1 0 0 2 0 0
..............................................................................................................AGTGAGGATGGGGTTTCTGGA.............................................................. 21 0 1 3.00 3 2 1 0 0 0 0
..................................................................TGGAACTCGTTTCTCAGCTGTCAT....................................................................................................... 24 0 1 3.00 3 2 1 0 0 0 0
..................................................................TGGAACTCGTTTCTCAGCTG........................................................................................................... 20 0 1 3.00 3 0 3 0 0 0 0
............................................................................................................ACAGTGAGGATGGGGTTTCTGGT.............................................................. 23 1 1 3.00 3 2 0 0 1 0 0
..................................................................TGGAACTCGTTTCTCAGATGTCA........................................................................................................ 23 1 1 3.00 3 3 0 0 0 0 0
..................................................................TGGAACTCGCTTCTCAGCTGTCA........................................................................................................ 23 1 1 3.00 3 2 0 1 0 0 0
..................................................................TGGAACTCGTTACTCAGCTGTCA........................................................................................................ 23 1 1 3.00 3 3 0 0 0 0 0
..................................................................TGGAACTCGTTTCTCGGCTGTCA........................................................................................................ 23 1 1 2.00 2 2 0 0 0 0 0
..................................................................TGGAACTCGTTGCTCAGCTGTCA........................................................................................................ 23 1 1 2.00 2 2 0 0 0 0 0
...........................................................................................................AACAGTGAGGATGGGGTTTCTTT............................................................... 23 2 1 2.00 2 0 0 1 1 0 0
..................................................................TGGAGCTCGTTTCTCAGCTGTCA........................................................................................................ 23 1 1 2.00 2 2 0 0 0 0 0
..........................................................................................................TAACAGTGAGGATGGGGTTT................................................................... 20 0 1 2.00 2 2 0 0 0 0 0
..................................................................TGGAACTTGTTTCTCAGCTGTCA........................................................................................................ 23 1 1 2.00 2 2 0 0 0 0 0
..............................................................................................................AGTGAGGATGGGGTTTCTGGAC............................................................. 22 1 1 2.00 2 2 0 0 0 0 0
..................................................................TGTAACTCGTTTCTCAGCTGTCA........................................................................................................ 23 1 1 2.00 2 2 0 0 0 0 0
...................................................................TGAACTCGTTTCTCAGCTGTCA........................................................................................................ 22 1 1 2.00 2 2 0 0 0 0 0
............................................................................................................ACAGTGAGGATGGGGTTTCT................................................................. 20 0 1 2.00 2 0 0 0 2 0 0
............................................................................................................ACAGTGAGGATGGGGTTTCTTT............................................................... 22 2 1 2.00 2 1 0 0 1 0 0
..................................................................TGGAACTCGTTCCTCAGCTGTCA........................................................................................................ 23 1 1 2.00 2 2 0 0 0 0 0
..................................................................TGGAACTCGTTTCTCACCTGTCA........................................................................................................ 23 1 1 1.00 1 1 0 0 0 0 0
..................................................................TGTAACTCTTTTCTCAGCTGTC......................................................................................................... 22 2 1 1.00 1 1 0 0 0 0 0
..................................................................TGGAACTCGTCTCTCAGCTGTCA........................................................................................................ 23 1 1 1.00 1 1 0 0 0 0 0
..................................................................TGGAACTCGTTTCTCAGATGTAA........................................................................................................ 23 2 1 1.00 1 1 0 0 0 0 0
...............................................................................................................GTGAGGATGGGGTTTCTGGATT............................................................ 22 0 1 1.00 1 1 0 0 0 0 0
...........................................................................................................AACAGTGAGGATGGGGTTTCTT................................................................ 22 1 1 1.00 1 0 1 0 0 0 0
..................................................................TGGAACTCGTTTCTCAGCTGTCATT...................................................................................................... 25 1 1 1.00 1 0 0 1 0 0 0
..................................................................TGGAACTCGTTTCTCAGCTGGCA........................................................................................................ 23 1 1 1.00 1 1 0 0 0 0 0
..................................................................TGGAACTCGTTTCTCAGCTGC.......................................................................................................... 21 1 1 1.00 1 0 1 0 0 0 0
..........................................................................................................TAACAGTGAGGATGGGGTTTCTC................................................................ 23 1 1 1.00 1 0 0 0 1 0 0
..........................................................................................................TAACAGTGAGGCTGGGGTTTCTG................................................................ 23 1 1 1.00 1 1 0 0 0 0 0
..........................................................................................................TAACAGTGAGGATGGGGTTTTTTT............................................................... 24 3 1 1.00 1 1 0 0 0 0 0
..................................................................TGGAACTCGTTTCTTAGCTGTCA........................................................................................................ 23 1 1 1.00 1 1 0 0 0 0 0
..................................................................TGGAACTCGTTTCTCAGCCGTCA........................................................................................................ 23 1 1 1.00 1 1 0 0 0 0 0
..................................................................TGGAACTCGTTTCTCCGCTGTC......................................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0
...............................................................AACTGGAACTCGTTTCTCAGCTG........................................................................................................... 23 0 1 1.00 1 0 0 1 0 0 0
..............................................................................................................AGTGAGGATGTGGTTTCTGGAT............................................................. 22 1 1 1.00 1 1 0 0 0 0 0
..................................................................TTGAACTCGTTTCTCAGCTGTCA........................................................................................................ 23 1 1 1.00 1 1 0 0 0 0 0
..................................................................TGGAACTCGTTTCTCATCTGTC......................................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0
..................................................................TGGAACTCGTTTCTCTGCTGTCAC....................................................................................................... 24 2 1 1.00 1 0 0 1 0 0 0
..........................................................................................................TAACAGTGAGGATGGGGTTTCA................................................................. 22 1 1 1.00 1 1 0 0 0 0 0
..................................................................TGGAACTCGTTTCTCAGCTGTCAG....................................................................................................... 24 1 1 1.00 1 0 1 0 0 0 0
..................................................................TGGAACTCGTTTCTCTGCTGTCA........................................................................................................ 23 1 1 1.00 1 1 0 0 0 0 0
..................................................................TGGAACTCATTTCTCAGCTGTCA........................................................................................................ 23 1 1 1.00 1 1 0 0 0 0 0
..............................................................................................................AGTGAGGATGGGGGTTC.................................................................. 17 1 1 1.00 1 0 0 1 0 0 0
.................................................................CTGGAACTCGTTTCTCAGCTGTCA........................................................................................................ 24 0 1 1.00 1 0 0 1 0 0 0
..................................................................TGGAACTCGTTTCTCAGCTGTCTT....................................................................................................... 24 1 1 1.00 1 1 0 0 0 0 0
..................................................................TGGAACTCGTTTCTCAGCTGAC......................................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0
..................................................................TGGAACTCCTTTCTCAGCTGTCA........................................................................................................ 23 1 1 1.00 1 0 1 0 0 0 0
..........................................................................................................TAACAGTGAGGACGGGGTTTCT................................................................. 22 1 1 1.00 1 1 0 0 0 0 0
..................................................................TGGAACTCGTTTATCAGCTGTC......................................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0
...........................................................................................................AACAGAGAGGATGGGGTTTCTG................................................................ 22 1 1 1.00 1 0 0 1 0 0 0
..................................................................TGGTACTAGTTTCTCAGCTGTCT........................................................................................................ 23 3 1 1.00 1 0 0 1 0 0 0
.............................................................................................................CAGTGAGGATGGGGTTTCTGGT.............................................................. 22 1 1 1.00 1 1 0 0 0 0 0
............................................................................................................ACAGTGAGGATGGGGTTTCTT................................................................ 21 1 1 1.00 1 0 0 0 1 0 0
..................................................................TGGAAGTCGGTTCTCAGCTGTCT........................................................................................................ 23 3 1 1.00 1 0 0 1 0 0 0
..................................................................TGGAACTAGTTTCTCAGCTGTCA........................................................................................................ 23 1 1 1.00 1 0 0 0 1 0 0
............................................................................................................ACAGTGAGGATGGGGTTTCTGGTT............................................................. 24 1 1 1.00 1 1 0 0 0 0 0
..........................................................................................................TAACAGTGAGAATGCGGTTTC.................................................................. 21 2 1 1.00 1 1 0 0 0 0 0
..................................................................TGGAACTCGTTTCGCAGGTGTCA........................................................................................................ 23 2 1 1.00 1 1 0 0 0 0 0
..................................................................TGGAAATCGTTTCTCAGCTGTC......................................................................................................... 22 1 1 1.00 1 0 0 1 0 0 0
.................................................................ATGGAACTCGTTTCTCAGCTGTCA........................................................................................................ 24 1 1 1.00 1 0 1 0 0 0 0
..........................................................................................................TAACAGTGAGGATGGGGTTTCTGGT.............................................................. 25 1 1 1.00 1 0 0 1 0 0 0
..............................................................................................................AGTGAGCATGGGGTTTCTGGTT............................................................. 22 2 1 1.00 1 1 0 0 0 0 0
............................................................................................................ACAGTGAGGATGGTGTTTCTGG............................................................... 22 1 1 1.00 1 0 1 0 0 0 0
..................................................................TTGAACTCGTTTCTCAGCTGCC......................................................................................................... 22 2 1 1.00 1 1 0 0 0 0 0
...................................................................GGAACTCGGTTCTCAGCTGTCA........................................................................................................ 22 1 1 1.00 1 0 1 0 0 0 0
..............................................................................................................AGTGAGGATGGGGTTTCTGGT.............................................................. 21 1 1 1.00 1 0 1 0 0 0 0
..................................................................TGGAACTCGTTTCCCAGCTGCCA........................................................................................................ 23 2 1 1.00 1 1 0 0 0 0 0
..................................................................TGGAACTCGTTTTTCAGCTGTCA........................................................................................................ 23 1 1 1.00 1 0 1 0 0 0 0
...................................................................GGAACTCGATTCTCAGCTGTCA........................................................................................................ 22 1 1 1.00 1 0 1 0 0 0 0
..................................................................TGGAACTCGTTTCTCAGCTGCC......................................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0
..............................................................................................................AGTGAGGATGGGGTTACTGGT.............................................................. 21 2 1 1.00 1 1 0 0 0 0 0
.........................................................................................TATACATTCGATAGCTATAAC................................................................................... 21 0 1 1.00 1 0 0 0 1 0 0
...............................................................AACTGGAACTCGTTTCTCAG.............................................................................................................. 20 0 1 1.00 1 0 0 0 1 0 0
..........................................................................................................TAACAGAGAGGACGGGGGTTCT................................................................. 22 3 1 1.00 1 0 0 1 0 0 0
..................................................................TGGAACTAGTTTCTCAGCTGACA........................................................................................................ 23 2 1 1.00 1 1 0 0 0 0 0
..................................................................TGGAACTCGCTTCTCAGCTGTC......................................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0
..........................................................................................................TAATAGTGAGGATGGGGTTTCTG................................................................ 23 1 1 1.00 1 0 0 0 0 1 0
..................................................................TGGAACTCGTTTCTCATCTGTCC........................................................................................................ 23 2 1 1.00 1 0 0 1 0 0 0
............................................................................................................ACAGTGAGGATGGGTTTTCTGG............................................................... 22 1 1 1.00 1 1 0 0 0 0 0
..................................................................TGGCACTCGTTTCTCAGCTGTCA........................................................................................................ 23 1 1 1.00 1 1 0 0 0 0 0
...................................................................GGAACTCGTTTCTCAGCTGTC......................................................................................................... 21 0 1 1.00 1 0 1 0 0 0 0
............................................................................................................ACAGTGAGGATGGGGTTTCTCGA.............................................................. 23 1 1 1.00 1 1 0 0 0 0 0
..................................................................CGGAACTCGTTTCTCAGCTGTCA........................................................................................................ 23 1 1 1.00 1 1 0 0 0 0 0
..............................................................................................................AGTGAGGATGGGGTTTCTG................................................................ 19 0 1 1.00 1 0 0 0 1 0 0
..................................................................TGGAACTCGTTTCTCAGCTGTT......................................................................................................... 22 1 1 1.00 1 0 1 0 0 0 0
..................................................................TGGAACTCGTTTCTCAGCTGTAAA....................................................................................................... 24 2 1 1.00 1 0 0 0 0 1 0
..........................................................................................................TAACAGTGGGGATGGGGTTTCT................................................................. 22 1 1 1.00 1 0 1 0 0 0 0
..................................................................TGGAACTCGTTACTCAGCTGTC......................................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0
..................................................................TGCTACTCGTTTCTCACCTGTCA........................................................................................................ 23 3 1 1.00 1 0 0 1 0 0 0
..................................................................TGGAACTCGTTTCTCAGCTGTCAC....................................................................................................... 24 1 1 1.00 1 1 0 0 0 0 0
..................................................................TGTAACTCGTTTCTCAGCTGTC......................................................................................................... 22 1 1 1.00 1 0 0 0 1 0 0
.......................................................TGCAGCTATAATGGAACTCGT..................................................................................................................... 21 3 2 0.50 1 0 0 1 0 0 0
............................................................................................................ACAGTGAGGATGGGGTTTCTTTT.............................................................. 23 3 2 0.50 1 1 0 0 0 0 0
.............................................................................................................CAGTGAGGATGGGGTTTCTGTTC............................................................. 23 3 2 0.50 1 0 1 0 0 0 0
..............................................................................................................AGTGAGGATGGGGTTTCTTTTTT............................................................ 23 3 3 0.33 1 0 0 0 1 0 0
..............................................................................................................AGTGAGGATGGGGTTTCTTTTT............................................................. 22 3 4 0.25 1 1 0 0 0 0 0
...........................................................................................................................TATCTGGATTAGGTGCAAT................................................... 19 2 5 0.20 1 1 0 0 0 0 0
.........................................................................................................ATAACGGTGAGGTTGGCGTT.................................................................... 20 3 5 0.20 1 0 1 0 0 0 0
..............................................................................................................................................GGGATTACGGGCAGACCACA............................... 20 3 5 0.20 1 0 0 0 0 1 0
...................AACGGCGGGGGTCACTTTGG.......................................................................................................................................................... 20 3 7 0.14 1 0 0 1 0 0 0
............................................................................................................................................................ACCAGTGTGATTGGGCCCC.................. 19 3 11 0.09 1 0 0 0 0 0 1
..................................................................................................................AGGACGGGGTTTATGGA.............................................................. 17 2 14 0.07 1 0 0 1 0 0 0
....................................TGGGTCGGCTAGAGATGGT.......................................................................................................................................... 19 3 15 0.07 1 0 0 1 0 0 0
.........................................................................................................................GGTTTCTGCATTAATTGC...................................................... 18 2 16 0.06 1 0 0 0 0 1 0
.................................CTAAGGGTCGGGCAGCGA.............................................................................................................................................. 18 3 20 0.05 1 0 0 1 0 0 0

Anti-sense strand reads

TCCTGCTAGGTCCGCCACGTTATCGCCCCTAGTGAAACCCAGCCGGTCGCTAACAACATCGATTTGACCTTGAGCAAAGAGTCGACAGTATATGTAAGCTATCGATATTGTCACTCCTACCCCAAAGACCTAATTCACGTTACCATAATGCCCGGCTGGTGACACTGACCCAGGGTGGCACTTCACCCACGCC

**************************************************..((((((..(((.(((((((((..((((((((((((..........))))))........))))))..))).)))))).)))..)))))).*************************************************** 		Read size # Mismatch Hit Count Total Norm Total V039

embryo

 M044

female body

 M058

embryo

 V106

head
..................................................................................................................TCCTACCCCCAACACCTAAT........................................................... 20 2 1 1.00 1 1 0 0 0
...................................................................................................................................................ATGCCCGGCTGGTGACACTGA......................... 21 0 1 1.00 1 0 1 0 0
...................................................................................................................................AAAGCACGTTACCATAAT............................................ 18 2 6 0.17 1 1 0 0 0
..................................................................................................CTATCGAAATTATCACTCC............................................................................ 19 2 20 0.05 1 0 0 1 0
......................................................................TGCGCAATGAGTGGACAG......................................................................................................... 18 3 20 0.05 1 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Type Alignment
droAna3 scaffold_13417:2460663-2460855 - dan_231 confident AGGACGATCCAGGCGGTGCAATAGCGGGGATCACTTTGGGTCGGCCAGCGATTGTTGTAGCTAAACTGGAACTCGTTTCTCAGCTGTCATATACATTCGATAGCTATAACAGTGAGGATGGGGTTTCTGGATTAAGTGCAAT---GGTATTACGGGCCGACCACTGT--GACTGGGTC--CC----------------------------ACCGTGAAGTGGGTGCGG
droBip1 scf7180000395874:32722-32890 - GTACA---------------------GGGATCACTTTTGGTCGACCAACGATTGTTGTAGCTAAACTGGAACTCGTTTCTCACCTGTCATATACATCCGATAGCTATAACAGTGAGGATTGGGTTTCTGGATTAAGTGCAAT---GGTGTTACGGGCCGACTACTGT--GACTGGGGC--CC----------------------------A---CCAAGTGGGTGCGG
droKik1 scf7180000302517:1186301-1186441 + CAACACGGATCGGCG----------------------------GTCCACAATTGTTGCAACTAAACTGGAACTCGCTCCTCATCTGTCATGTGCATTCGTTAGCTATTACAGTGAGGTTGGAGTTTCTGGATTAAGTGCAAT---GGTG----------ATTACCG----------------T---ACCAAT---------------ATGG---CCA---------AG
droFic1 scf7180000454073:1735817-1735956 + TCG----------------------------------------ATTGGCGATTGTTGCAGCTAAACTGGAACTCAAATCTCAGCTGTCATATGCATTCAATAG-TATCGCAGTGGGGGTGGG--TTCTAGAACAAGTGCAAT---CCTC------------CCGGGC--AATCGCTTCCG--T---GTCAAA-----------------------AAAGAAAGGACGA
droEle1 scf7180000490751:1121746-1121825 + --------------------------------------------------------------------------------CAGCTCTCAAACACATGCGATAGGTATGACAGTGTGAATGGGGTC------------------------------------------------GAGTCGA--TCGCGACAAAAAGAATGGAACGGAAGT------------------G
droRho1 scf7180000761121:187405-187535 - G------------------------------------------ACAAACGATTGTTGCAGCTAAACTGGAACTCATGTCTCAGCTGTCATATACATTTGATAGGTATAACAGTGAGGATGGGGTTTCTGGAATAAGTGCAAT---GGCG----------ACCAGAGCAAGATCGGGTTTG--T----------------------------------------TGCGG
droBia1 scf7180000302069:1148270-1148395 - ------------------------------------------------------TTGCAGCTAAACTGGAACCCTGGTCTCAACTGTCATGTGCACTTGATATGTATAACAGTGAGGACGGGGTTTCTGGAATAA-TGCAAT---GGTGG-----------CAGAGT--GATCGAGTCCA--TCG-----------------------------CGAGGGGGAAACGA
droTak1 scf7180000415169:842210-842319 - G------------------------------------------ACGAACGATTGTTGCAGCTAAACTGGAACCCAACT-TGCGCTGTGATATTCATTTGATAGGTATAACAGCGGGGATGGGGTTTTCGGAATAGGTGCAAT---AGTG------------------------------------------------------------------------AGTGCAG
droEug1 scf7180000409230:877491-877616 - A--------------------------------------------------TAGTTGCAGCTAAACTGGAACTCAAGTCTCAGCTGTCATATTCATTTGATAGTTATGACAGTGAGGATGGGGTTTCTGGAATAACTGCAACAATTGTG----------AGCAGTGA--GATCGAGTTTA--TCG-----------------------------CAA---------GG
droYak3 v2_chrUn_2706:8-58 - ACGGCGATGGGGGCAGTGTGGCAACAGAGACAGCTCGGGGTCCTCCA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCGA
droEre2 scaffold_4845:21531680-21531699 + AGAGCACTCCAGGCAGTCCA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
dp5 Unknown_group_129:12001-12027 - CTGGTG-------------------------------------------------------------------------TCCACCGTGGGAT--------------------------------------------------------------------------------------------------------------------------------CCATGGGA
droWil2 scf2_1100000004909:7960923-7961071 + dwi_144 confident ATGATTAACCAACCAACCAACTAAC-------------------TAACTAGCTGTTGTAACTAAACTGGAACTCATTTCTCAACTGTCATATACATACAATAGCTATAACAGTGAGACTAGGGTTTCTGGATTAAATGCAAT---AA----------------GTGA--AACAACG------T---AC------------------------------ATACATACAT
droVir3 scaffold_13042:902858-902983 - dvi_76 confident GATCCGGAGAC----------------AGATGAGTCTTGGATGATAACGCGATGTGGCATCTAAGCTGGAACTCGATTCTCCTCTGTCATATGCGGACGATAACTATGGCAGTGAGGGTGGGGTTTCCTTATTAGATGCGAT--------------------------------------------------------------------------------------
droMoj3 scaffold_6328:2897207-2897290 - G-------------------------------------------------ATGATGGCATCTAAGCTGGAACTCGATTCTCCTCTGTCATATGCAGCCGACAACTATGGCAGTGAGGGTGGGGTTTCCCTATT-----------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droAna3
AGGACGATCCAGGCGGTGCAATAGCGGGGATCACTTTGGGTCGGCCAGCGATTGTTGTAGCTAAACTGGAACTCGTTTCTCAGCTGTCATATACATTCGATAGCTATAACAGTGAGGATGGGGTTTCTGGATTAAGTGCAAT---GGTATTACGGGCCGACCACTGT--GACTGGGTC--CC----------------------------ACCGTGAAGTGGGTGCGGSizeHit CountTotal NormTotalM044

Female-body		M058

Embryo		V039

Embryo		V055

Head		V105

Male-body		V106

Head
..................................................................TGGAACTCGTTTCTCAGCTGTCA...........................................................................................................................................231549.0054987113241810
..................................................................TGGAACTCGTTTCTCAGCTGTC............................................................................................................................................22166.006612005472
..........................................................................................................TAACAGTGAGGATGGGGTTTCT....................................................................................................22124.00243002136
..................................................................TGGAACTCGTTTCTCAGCTGTCT...........................................................................................................................................23119.00190003160
..................................................................TGGAACTCGTTTCTCAGCTGT.............................................................................................................................................2119.009300060
..........................................................................................................TAACAGTGAGGATGGGGTTTCTG...................................................................................................2319.009200232
..........................................................................................................TAACAGTGAGGATGGGGTT.......................................................................................................1918.008000152
............................................................................................................ACAGTGAGGATGGGGTTTCTGG..................................................................................................2217.007100051
...........................................................................................................AACAGTGAGGATGGGGTTTCTG...................................................................................................2216.006200022
............................................................................................................ACAGTGAGGATGGGGTTTCTG...................................................................................................2116.006200040
...........................................................................................................AACAGTGAGGATGGGGTTTCT....................................................................................................2115.005100022
..........................................................................................................TAACAGTGAGGATGGGGTTTCTGG..................................................................................................2415.005000122
..............................................................................................................AGTGAGGATGGGGTTTCTGGAT................................................................................................2214.004000040
..........................................................................................................TAACAGTGAGGATGGGGTTTC.....................................................................................................2114.004000031
............................................................................................................ACAGTGAGGATGGGGTTTCTGGA.................................................................................................2314.004000013
...............................................................AACTGGAACTCGTTTCTCAGCT...............................................................................................................................................2214.004200110
...........................................................................................................AACAGTGAGGATGGGGTTTCTGG..................................................................................................2313.003000030
..........................................................................................................TAACAGTGAGGATGGGGTTTCTTT..................................................................................................2413.003000012
...................................................................GGAACTCGTTTCTCAGCTGTCA...........................................................................................................................................2213.003300000
..............................................................................................................AGTGAGGATGGGGTTTCTGG..................................................................................................2013.003000210
..........................................................................................................TAACAGTGAGGATGGGGTTTCTT...................................................................................................2313.003000012
..............................................................................................................AGTGAGGATGGGGTTTCTGGA.................................................................................................2113.003100020
..................................................................TGGAACTCGTTTCTCAGCTGTCAT..........................................................................................................................................2413.003100020
..................................................................TGGAACTCGTTTCTCAGCTG..............................................................................................................................................2013.003300000
............................................................................................................ACAGTGAGGATGGGGTTTCTGGT.................................................................................................2313.003000021
...........................................................................................................AACAGTGAGGATGGGGTTTCTTT..................................................................................................2312.002000101
..........................................................................................................TAACAGTGAGGATGGGGTTT......................................................................................................2012.002000020
..............................................................................................................AGTGAGGATGGGGTTTCTGGAC................................................................................................2212.002000020
............................................................................................................ACAGTGAGGATGGGGTTTCT....................................................................................................2012.002000002
............................................................................................................ACAGTGAGGATGGGGTTTCTTT..................................................................................................2212.002000011
...............................................................................................................GTGAGGATGGGGTTTCTGGATT...............................................................................................2211.001000010
...........................................................................................................AACAGTGAGGATGGGGTTTCTT...................................................................................................2211.001100000
..................................................................TGGAACTCGTTTCTCAGCTGTCATT.........................................................................................................................................2511.001000100
..................................................................TGGAACTCGTTTCTCAGCTGC.............................................................................................................................................2111.001100000
..........................................................................................................TAACAGTGAGGATGGGGTTTCTC...................................................................................................2311.001000001
...............................................................AACTGGAACTCGTTTCTCAGCTG..............................................................................................................................................2311.001000100
..........................................................................................................TAACAGTGAGGATGGGGTTTCA....................................................................................................2211.001000010
..................................................................TGGAACTCGTTTCTCAGCTGTCAG..........................................................................................................................................2411.001100000
.................................................................CTGGAACTCGTTTCTCAGCTGTCA...........................................................................................................................................2411.001000100
.............................................................................................................CAGTGAGGATGGGGTTTCTGGT.................................................................................................2211.001000010
............................................................................................................ACAGTGAGGATGGGGTTTCTT...................................................................................................2111.001000001
..........................................................................................................TAACAGTGAGGATGGGGTTTCTGGT.................................................................................................2511.001000100
..............................................................................................................AGTGAGGATGGGGTTTCTGGT.................................................................................................2111.001100000
.........................................................................................TATACATTCGATAGCTATAAC......................................................................................................................2111.001000001
...............................................................AACTGGAACTCGTTTCTCAG.................................................................................................................................................2011.001000001
...................................................................GGAACTCGTTTCTCAGCTGTC............................................................................................................................................2111.001100000
..............................................................................................................AGTGAGGATGGGGTTTCTG...................................................................................................1911.001000001
..................................................................TGGAACTCGTTTCTCAGCTGTT............................................................................................................................................2211.001100000
..................................................................TGGAACTCGTTTCTCAGCTGTCAC..........................................................................................................................................2411.001000010
............................................................................................................ACAGTGAGGATGGGGTTTCTTTT.................................................................................................2320.501000010
.............................................................................................................CAGTGAGGATGGGGTTTCTGTTC................................................................................................2320.501100000
droBip1
GTACA---------------------GGGATCACTTTTGGTCGACCAACGATTGTTGTAGCTAAACTGGAACTCGTTTCTCACCTGTCATATACATCCGATAGCTATAACAGTGAGGATTGGGTTTCTGGATTAAGTGCAAT---GGTGTTACGGGCCGACTACTGT--GACTGGGGC--CC----------------------------A---CCAAGTGGGTGCGGSizeHit CountTotal NormTotal
No Reads
droKik1
CAACACGGATCGGCG----------------------------GTCCACAATTGTTGCAACTAAACTGGAACTCGCTCCTCATCTGTCATGTGCATTCGTTAGCTATTACAGTGAGGTTGGAGTTTCTGGATTAAGTGCAAT---GGTG----------ATTACCG----------------T---ACCAAT---------------ATGG---CCA---------AGSizeHit CountTotal NormTotal
No Reads
droFic1
TCG----------------------------------------ATTGGCGATTGTTGCAGCTAAACTGGAACTCAAATCTCAGCTGTCATATGCATTCAATAG-TATCGCAGTGGGGGTGGG--TTCTAGAACAAGTGCAAT---CCTC------------CCGGGC--AATCGCTTCCG--T---GTCAAA-----------------------AAAGAAAGGACGASizeHit CountTotal NormTotal
No Reads
droEle1
--------------------------------------------------------------------------------CAGCTCTCAAACACATGCGATAGGTATGACAGTGTGAATGGGGTC------------------------------------------------GAGTCGA--TCGCGACAAAAAGAATGGAACGGAAGT------------------GSizeHit CountTotal NormTotal
No Reads
droRho1
G------------------------------------------ACAAACGATTGTTGCAGCTAAACTGGAACTCATGTCTCAGCTGTCATATACATTTGATAGGTATAACAGTGAGGATGGGGTTTCTGGAATAAGTGCAAT---GGCG----------ACCAGAGCAAGATCGGGTTTG--T----------------------------------------TGCGGSizeHit CountTotal NormTotal
No Reads
droBia1
------------------------------------------------------TTGCAGCTAAACTGGAACCCTGGTCTCAACTGTCATGTGCACTTGATATGTATAACAGTGAGGACGGGGTTTCTGGAATAA-TGCAAT---GGTGG-----------CAGAGT--GATCGAGTCCA--TCG-----------------------------CGAGGGGGAAACGASizeHit CountTotal NormTotal
No Reads
droTak1
G------------------------------------------ACGAACGATTGTTGCAGCTAAACTGGAACCCAACT-TGCGCTGTGATATTCATTTGATAGGTATAACAGCGGGGATGGGGTTTTCGGAATAGGTGCAAT---AGTG------------------------------------------------------------------------AGTGCAGSizeHit CountTotal NormTotal
No Reads
droEug1
A--------------------------------------------------TAGTTGCAGCTAAACTGGAACTCAAGTCTCAGCTGTCATATTCATTTGATAGTTATGACAGTGAGGATGGGGTTTCTGGAATAACTGCAACAATTGTG----------AGCAGTGA--GATCGAGTTTA--TCG-----------------------------CAA---------GGSizeHit CountTotal NormTotal
No Reads
droYak3
ACGGCGATGGGGGCAGTGTGGCAACAGAGACAGCTCGGGGTCCTCCA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCGASizeHit CountTotal NormTotalM026

Head		M043

Female-body		M056

Embryo		V046

Embryo		V052

Head		V058

Head		V120

Male-body		SRR1275488

Male larvae		SRR1275486

Male prepupae		SRR1275484

Male prepupae		GSM1528802

follicle cells
.....................CAACAGAGACAGCTCGGG.............................................................................................................................................................................................1894.0036084000000024
.....................CAACAGAGACAGCTCGGGGTCC.........................................................................................................................................................................................2213.00300300000000
.....................CAACAGAGACAGCTCGGGGTCCT........................................................................................................................................................................................2313.00300210000000
.....................CAACAGAGACAGCTCGGGG............................................................................................................................................................................................1992.2220011510030000
.....................CAACAGAGACAGCTCGGGGTCCTC.......................................................................................................................................................................................2412.00200200000000
.....................CAACAGAGACAGCTCGGGGT...........................................................................................................................................................................................2011.00100100000000
.....................CAACAGAGACAGCTCGGGGTC..........................................................................................................................................................................................2111.00101000000000
..........................GAGACAGCTCGGGGTCCTC.......................................................................................................................................................................................1911.00100100000000
..................TGGCAACAGAGACAGCTCGGGGTCC.........................................................................................................................................................................................2511.00100100000000
.....................CAACAGAGACAGCTCGGGGTCCTCC......................................................................................................................................................................................2511.00100100000000
...................GGCAACAGAGACAGCTCGGGGTCC.........................................................................................................................................................................................2411.00100100000000
..................TGGCAACAGAGACAGCTCGGGGT...........................................................................................................................................................................................2311.00101000000000
............GCAGTGTGGCAACAGAGACAGCTCG...............................................................................................................................................................................................2511.00101000000000
.....................CAACAGAGACAGCTCGGGGTCCC........................................................................................................................................................................................2311.00100100000000
..................TGGCAACAGAGACAGCTCGGGG............................................................................................................................................................................................2290.89803500000000
......................AACAGAGACAGCTCGGGG............................................................................................................................................................................................1890.22202000000000
.....................CAACAGAGACAGCTCGGT.............................................................................................................................................................................................1890.22200110000000
.....................CAACAGAGACAGCTCGGGT............................................................................................................................................................................................1990.11100000010000
..................TGGCAACAGAGACAGCTCGGGGA...........................................................................................................................................................................................2390.11100100000000
.....................CAACAGAGACAGCTCGGTCC...........................................................................................................................................................................................20200.05100100000000
droEre2
AGAGCACTCCAGGCAGTCCA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM055

Female-body		M057

Embryo		V060

Head		V040

Embryo		V107

Male-body		V108

Head		GSM1528801

follicle cells
No Reads
dp5
CTGGTG-------------------------------------------------------------------------TCCACCGTGGGAT--------------------------------------------------------------------------------------------------------------------------------CCATGGGASizeHit CountTotal NormTotalM022

Male-body		M040

Female-body		M059

Embryo		M062

Head		V043

Embryo		V051

Head		V112

Male-body		SRR902010

Ovary		SRR902011

Testis		SRR902012

CNS imaginal disc
....TG-------------------------------------------------------------------------TCCACCGTGGGAT--------------------------------------------------------------------------------------------------------------------------------CCATGGGA2311.0010100000000
droWil2
ATGATTAACCAACCAACCAACTAAC-------------------TAACTAGCTGTTGTAACTAAACTGGAACTCATTTCTCAACTGTCATATACATACAATAGCTATAACAGTGAGACTAGGGTTTCTGGATTAAATGCAAT---AA----------------GTGA--AACAACG------T---AC------------------------------ATACATACATSizeHit CountTotal NormTotalM020

Head		M045

Female-body		V117

Male-body		V118

Embryo		V119

Head
...............................................................AACTGGAACTCATTTCTCAACT...............................................................................................................................................221137.001371320302
...............................................................AACTGGAACTCATTTCTCAACTG..............................................................................................................................................23128.00281711000
..................................................................TGGAACTCATTTCTCAACTGTCA...........................................................................................................................................23123.0023002102
..........................................................................................................TAACAGTGAGACTAGGGTTTC.....................................................................................................21115.001520904
..........................................................................................................TAACAGTGAGACTAGGGTTTCTG...................................................................................................23110.001020701
................................................................ACTGGAACTCATTTCTCAACTGT.............................................................................................................................................2318.00830500
..........................................................................................................TAACAGTGAGACTAGGGTTTCT....................................................................................................2217.00710303
...........................................................................................................AACAGTGAGACTAGGGTTTCTG...................................................................................................2217.00700601
..........................................................................................................TAACAGTGAGACTAGGGTTT......................................................................................................2015.00500500
...............................................................................................................GTGAGACTAGGGTTTCTGGAT................................................................................................2114.00400400
...............................................................AACTGGAACTCATTTCTCAACC...............................................................................................................................................2214.00440000
...............................................................................................................GTGAGACTAGGGTTTCTGGATT...............................................................................................2214.00400400
...............................................................AACTGGAACTCATTTCTCAAC................................................................................................................................................2114.00430100
...............................................................AACTGGAACTCATTTCTCAACTGT.............................................................................................................................................2412.00210100
...........................................................................................................AACAGTGAGACTAGGGTTTC.....................................................................................................2012.00200200
...............................................................................................................GTGAGACTAGGGTTTCTGGATTA..............................................................................................2312.00200200
................................................................ACTGGAACTCATTTCTCAACTG..............................................................................................................................................2212.00210100
...............................................................AACTGGAACTCATTTCTCAACTGA.............................................................................................................................................2411.00100010
............................................................................................................ACAGTGAGACTAGGGTTTCTGG..................................................................................................2211.00100100
...............................................................AACTGGAACTCATTTCTCA..................................................................................................................................................1911.00110000
..........................................................................................................TAACAGTGAGACTAGGGTTTCCT...................................................................................................2311.00100100
...............................................................................................................GTGAGACTAGGGTTTCTGGATTAA.............................................................................................2411.00100100
..........................................................................................................TAACAGTGAGACTAGGGTTCTG....................................................................................................2211.00100100
...........................................................................................................AACAGTGAGACTAGGGTTT......................................................................................................1911.00100100
...............................................................................................................GTGAGACTAGGGTTTCTGGA.................................................................................................2011.00100100
..........................................................................................................TAACAGTGAGACTAGGGTT.......................................................................................................1911.00100100
................................................................ACTGGAACTCATTTCTCAACTGC.............................................................................................................................................2311.00110000
..................................................................TGGAACTCATTTCTCAACTGT.............................................................................................................................................2111.00100100
...........................................................................................................AACAGTGAGACTAGGGTTTCT....................................................................................................2111.00100100
...............................................................AACTGGAACTCATTTCTCAACTGG.............................................................................................................................................2411.00110000
...............................................................AACTGGAACTCATTTCTC...................................................................................................................................................1811.00110000
...............................................................AACTGGAACTCATTTCTCAACG...............................................................................................................................................2211.00110000
..................................................................TGGAACTCATTTCTCAACTGTCAT..........................................................................................................................................2411.00100100
droVir3
GATCCGGAGAC----------------AGATGAGTCTTGGATGATAACGCGATGTGGCATCTAAGCTGGAACTCGATTCTCCTCTGTCATATGCGGACGATAACTATGGCAGTGAGGGTGGGGTTTCCTTATTAGATGCGAT--------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM027

Male-body		M028

Head		M047

Female-body		M061

Embryo		SRR060654

Ovary		SRR060655

Testis		SRR060656

Ovary		SRR060657

Testis		SRR060658

Ovary		SRR060659

Testis		SRR060660

Ovary		SRR060661

Embryo		SRR060662

Embryo		SRR060663

Embryo		SRR060664

Male-body		SRR060665

Female-body		SRR060666

Male-body		SRR060667

Female-body		SRR060668

Male-body		SRR060669

Female-body		SRR060670

Testis		SRR060671

Male-body		SRR060672

Female-body		SRR060673

Ovary		SRR060674

Ovary		SRR060675

Ovary		SRR060676

Ovary		SRR060677

Ovary		SRR060678

Testis		SRR060679

Testis		SRR060680

Testis		SRR060681

Testis		SRR060682

Embryo		SRR060683

Testis		SRR060684

Embryo		SRR060685

Embryo		SRR060686

Embryo		SRR060687

Embryo		SRR060688

Ovary		SRR060689

Testis		SRR1106712

embryo_0-2h		SRR1106713

embryo_0-2h		SRR1106714

embryo_2-4h		SRR1106715

embryo_4-6h		SRR1106716

embryo_4-6h		SRR1106717

embryo_6-8h		SRR1106718

embryo_6-8h		SRR1106719

embryo_8-10h		SRR1106720

embryo_8-10h		SRR1106721

embryo_10-12h		SRR1106722

embryo_10-12h		SRR1106723

embryo_12-14h		SRR1106724

embryo_12-14h		SRR1106725

embryo_14-16h		SRR1106726

embryo_14-16h		SRR1106727

larvae		SRR1106728

larvae		SRR1106729

mixed whole adult body		SRR1106730

embryo_16-30h		V047

Embryo		V053

Head		V116

Male-body		GSM1528803

follicle cells		SRR2096013

Ovary_Strain_9_oxidized		SRR2096014

Ovary_Strain_160_oxidized		SRR2096026

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096038

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096050

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096055

Ovary_Min_43		SRR2096056

Ovary_Min_46		SRR2096057

Ovary_Min_50		SRR2096058

Ovary_Min_98		SRR2096059

Ovary_Min_164		SRR2096060

Ovary_Min_193		SRR2096061

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096072

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096079

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096080

embryo_0-2h from 15to16 day old nondysgenic mothers		SRR2096081

embryo_0-2h from 15to16 day old nondysgenic mothers
....................................................................GAACTCGATTCTCCTCTGTCAT..........................................................................................................................................22114680.001468060848114412601400008223613331351321547243420112540670243210123720000000000000000001102100067044500300110
....................................................................GAACTCGATTCTCCTCTGTCATC.........................................................................................................................................2317513.0075138304725112000100000100020200202001319151373820253501282000119900000000000000000700029000000163910100121
....................................................................GAACTCGATTCTCCTCTGTCA...........................................................................................................................................2112731.0027311049126706050000000010850122101676629240706078000111520000000000000000010011300020002500000000
....................................................................GAACTCGATTCTCCTCTGTCATA.........................................................................................................................................2312289.0022891505960120402000021011020010000191844717951911400000410000000000001001002101000021073830200103
..........................................................................................................TGGCAGTGAGGGTGGGGTTTCC....................................................................................................221722.00722006114901705100000000001030000000126107371610260000090000000000000000000102700000000000000000
..........................................................................................................TGGCAGTGAGGGTGGGGTTTC.....................................................................................................211469.004690031019060380000000000440000000115724111107000006000000000000000000000600000000000000000
..........................................................................................................TGGCAGTGAGGGTGGGGTTT......................................................................................................201293.0029300400801202100000000001100000008068175808000002000000000000000000000400000000000000000
..................................................................TGGAACTCGATTCTCCTCTGTCA...........................................................................................................................................231228.00228005001010000000000007000000079501556000000010000000000000000000000100001100000000010
..........................................................................................................TGGCAGTGAGGGTGGGGTTTCCT...................................................................................................231215.00215003009040110000000000210200000641718370111000040000000000000000001001200000000000000000
....................................................................GAACTCGATTCTCCTCTGTCATCC........................................................................................................................................241200.002001004000000000000000005000000032253174013000001000000000000000000000100000030100000000
..........................................................................................................TGGCAGTGAGGGTGGGGTTTCCC...................................................................................................231179.0017900000230008000000000036000000019171436012000006000000000000000000000800000000000000000
....................................................................GAACTCGATTCTCCTCTGTC............................................................................................................................................201172.001721030019050300000000108100000038321232030000012000000000000000000000200000000000000000
.....................................................................AACTCGATTCTCCTCTGTCATAT........................................................................................................................................231162.00162202000000000000000001000000004927115402000004000000000000000000000000001000000000000
....................................................................GAACTCGATTCTCCTCTGTCATT.........................................................................................................................................231154.0015410010201000000000100000000004726145300000006000000000000000000000100000010000000000
.....................................................................AACTCGATTCTCCTCTGTCAT..........................................................................................................................................211154.001540060020100000000000011000000038251236060000017000000000000000000000000000000000000000
.....................................................................AACTCGATTCTCCTCTGTCATA.........................................................................................................................................221121.001210060001100000000000070000000252993401000007000000000000000000000100000000000000000
....................................................................GAACTCGATTCTCCTCTGTCATAA........................................................................................................................................241112.001120020000000000000000000000000392383500000000000000000000000000000000021010100000000
.....................................................................AACTCGATTCTCCTCTGTCATC.........................................................................................................................................22191.00911030030000000000000060000000157825080000015000000000000000000000000000000000000000
..........................................................................................................TGGCAGTGAGGGTGGGGTTTCCTC..................................................................................................24191.00910000017000900000000002900000001131803000004000000000000000000000400000000200000000
....................................................................GAACTCGATTCTCCTCTGTCC...........................................................................................................................................21181.00811010070000000000000010200000091081906000007000000000000000000001000000000000000000
....................................................................GAACTCGATTCTCCTCTGTCATAT........................................................................................................................................24178.00781010010000000000000000000000281742400000000000000000000000000000000000020000000000
..................................................................TGGAACTCGATTCTCCTCTGTC............................................................................................................................................22151.005100000201000000000000200000009932100000004000000000000000000000000000000000000000
..................................................................TGGAACTCGATTCTCCTCTGTCAT..........................................................................................................................................24137.00370000000000000000000000000000111221100000000000000000000000000000000000000000000001
....................................................................GAACTCGATTCTCCTCTGT.............................................................................................................................................19136.00360020030201000000000020000000673702000001000000000000000000000000000000000000000
..........................................................................................................TGGCAGTGAGGGTGGGGTTTCT....................................................................................................22136.003600100001030000000000200000008113500000000000000000000000000000200000000000000000
..........................................................................................................TGGCAGTGAGGGTGGGGTTTCCCC..................................................................................................24132.003200000100010000000000000000002451000000003000000000000000000000600000000000000000
..........................................................................................................TGGCAGTGAGGGTGGGGTTC......................................................................................................20130.003000000100020000000000300000009401001000000000000000000000000000000000000000000000
..........................................................................................................TGGCAGTGAGGGTGGGGTTTT.....................................................................................................21127.002700100003010000000000100000008101101000000000000000000000000000000000000000000000
..................................................................TGGAACTCGATTCTCCTCTGTCC...........................................................................................................................................23124.002400000200000000000000000000003621100000000000000000000000000000000000000000000000
..................................................................TGGAACTCGATTCTCCTCTGT.............................................................................................................................................21124.00240000010103000000000020000000161603000000000000000000000000000000000000000000000
..................................................................TGGAACTCGATTCTCCTCTGTCATC.........................................................................................................................................25120.00200000000000000000000010000000534600000001000000000000000000000000000000000000000
..........................................................................................................TGGCAGTGAGGGTGGGGTT.......................................................................................................19120.00200000010103000000000000000000530600000000000000000000000000000100000000000000000
..........................................................................................................TGGCAGTGAGGGTGGGGTTTCA....................................................................................................22118.00180000000001000000000010000000243500000001000000000000000000000100000000000000000
.....................................................................AACTCGATTCTCCTCTGTCA...........................................................................................................................................20118.00180040000000000000000020000000440200000002000000000000000000000000000000000000000
....................................................................GAACTCGATTCTCCTCTGTCATAC........................................................................................................................................24117.00170000000000000000000010000000342600000001000000000000000000000000000000000000000
....................................................................GAACTCGATTCTCCTCTGTCAC..........................................................................................................................................22114.00140000000000000000000020000000250500000000000000000000000000000000000000000000000
...........................................................................................................GGCAGTGAGGGTGGGGTTTCCTC..................................................................................................23113.00130000000001000000000060000000200201000000000000000000000000000100000000000000000
..........................................................................................................TGGCAGTGAGGGTGGGGT........................................................................................................18113.00130000020300000000000060000000010001000000000000000000000000000000000000000000000
....................................................................GAACTCGATTCTCCTCTGTCATTC........................................................................................................................................24112.00120000000000000000000000000000333300000000000000000000000000000000000000000000000
..........................................................................................................TGGCAGTGAGGGTGGGGTTTCTC...................................................................................................23111.00110000000000000000000020000000120301000002000000000000000000000000000000000000000
....................................................................GAACTCGATTCTCCTCTGTCATAAA.......................................................................................................................................2519.0090000000000000000000000000000200200000000000000000000000000000000032000000000000
....................................................................GAACTCGATTCTCCTCTGTCAA..........................................................................................................................................2219.0090000000000000000000000000000020500000000000000000000000000000000001000000000100
......................................................................ACTCGATTCTCCTCTGTCATC.........................................................................................................................................2117.0070000010000000000000000000000321000000000000000000000000000000000000000000000000
.......................................................................CTCGATTCTCCTCTGTCAT..........................................................................................................................................1916.0060000000000000000000010000000120200000000000000000000000000000000000000000000000
..........................................................................................................TGGCAGTGAGGGTGGGGTTTCCTCC.................................................................................................2516.0060000000000000000000010000000000202000000000000000000000000000100000000000000000
........................................................................TCGATTCTCCTCTGTCATC.........................................................................................................................................1916.0060000010000000000000010000000200000000002000000000000000000000000000000000000000
....................................................................GAACTCGATTCTCCTCTGTCATCA........................................................................................................................................2416.0060000000000000000000000000000022200000000000000000000000000000000000000000000000
.....................................................................AACTCGATTCTCCTCTGTCATATC.......................................................................................................................................2416.0060000000000000000000020000000301000000000000000000000000000000000000000000000000
........................................................................TCGATTCTCCTCTGTCAT..........................................................................................................................................1816.0060000000000000000000000000000130101000000000000000000000000000000000000000000000
..........................................................................................................TGGCAGTGAGGGTGGGGTTTCCTCT.................................................................................................2515.0050000000002000000000000000000000200000001000000000000000000000000000000000000000
..........................................................................................................TGGCAGTGAGGGTGGGGTTTCCCCC.................................................................................................2515.0050000000000000000000000000000101200000000000000000000000000000100000000000000000
..........................................................................................................TGGCAGTGAGGGTGGGGTTTA.....................................................................................................2115.0050000000000000000000000000000220100000000000000000000000000000000000000000000000
......................................................................ACTCGATTCTCCTCTGTCAT..........................................................................................................................................2015.0050000000000000000000010000000220000000000000000000000000000000000000000000000000
............................................................................................................GCAGTGAGGGTGGGGTTTCCTC..................................................................................................2215.0050000000001000000000020000000100001000000000000000000000000000000000000000000000
....................................................................GAACTCGATTCTCCTCTGTCACC.........................................................................................................................................2315.0050000000000000000000010000000010102000000000000000000000000000000000000000000000
....................................................................GAACTCGATTCTCCTCTGTCATATC.......................................................................................................................................2515.0051000000000000000000000000000110200000000000000000000000000000000000000000000000
.........................................................................................................ATGGCAGTGAGGGTGGGGTTTCC....................................................................................................2315.0050000000000000000000030000000000100000000000000000000000000000100000000000000000
..........................................................................................................TGGCAGTGAGGGTGGGGTTTCTCC..................................................................................................2415.0050000000000000000000000000000201200000000000000000000000000000000000000000000000
..........................................................................................................TGGCAGTGAGGGTGGGGTTTTTC...................................................................................................2315.0050000000000000000000010000000020200000000000000000000000000000000000000000000000
....................................................................GAACTCGATTCTCCTCTGTCATCG........................................................................................................................................2414.0041000010000000000000000000000011000000000000000000000000000000000000000000000000
..........................................................................................................TGGCAGTGAGGGTGGGGTTCT.....................................................................................................2114.0040000010000000000000000000000001200000000000000000000000000000000000000000000000
.........................................................................CGATTCTCCTCTGTCATC.........................................................................................................................................1814.0040000000000000000000000000000101200000000000000000000000000000000000000000000000
...........................................................................................................GGCAGTGAGGGTGGGGTTTCCT...................................................................................................2214.0040000000100000000000000000000000101000000000000000000000000000100000000000000000
..........................................................................................................TGGCAGTGAGGGTGGGGTTTTT....................................................................................................2214.0040000000000000000000000000000201100000000000000000000000000000000000000000000000
..........................................................................................................TGGCAGTGAGGGTGGGGTTTCCTT..................................................................................................2414.0040000000002000000000010000000000100000000000000000000000000000000000000000000000
.......................................................................CTCGATTCTCCTCTGTCATA.........................................................................................................................................2014.0040000020000000000000000000000100001000000000000000000000000000000000000000000000
.......................................................................CTCGATTCTCCTCTGTCA...........................................................................................................................................1813.0030010000100000000000000000000010000000000000000000000000000000000000000000000000
..........................................................................................................TGGCAGTGAGGGTGGGGTTTCCCCT.................................................................................................2513.0030000000000000000000000000000101000000000000000000000000000000100000000000000000
............................................................................................................GCAGTGAGGGTGGGGTTTC.....................................................................................................1913.0030000000002000000000000000000000001000000000000000000000000000000000000000000000
.....................................................................AACTCGATTCTCCTCTGTCATAA........................................................................................................................................2313.0030000000000000000000000000000110001000000000000000000000000000000000000000000000
....................................................................GAACTCGATTCTCCTCTGTCT...........................................................................................................................................2113.0030000000000000000000000000000010100000001000000000000000000000000000000000000000
.......................................................................CTCGATTCTCCTCTGTCATCC........................................................................................................................................2113.0030000000000000000000000000000000100000002000000000000000000000000000000000000000
....................................................................GAACTCGATTCTCCTCTGTCG...........................................................................................................................................2113.0031000000000000000000000000000000000000002000000000000000000000000000000000000000
......................................................................ACTCGATTCTCCTCTGTCA...........................................................................................................................................1913.0030010000000000000000000000000011000000000000000000000000000000000000000000000000
..................................................................TGGAACTCGATTCTCCTCTGTCT...........................................................................................................................................2313.0030000010100000000000000000000000100000000000000000000000000000000000000000000000
..........................................................................................................TGGCAGTGAGGGTGGGGTTTG.....................................................................................................2113.0030000000101000000000010000000000000000000000000000000000000000000000000000000000
.......................................................................CTCGATTCTCCTCTGTCATC.........................................................................................................................................2013.0030000000000000000000000000000000201000000000000000000000000000000000000000000000
....................................................................GAACTCGATTCTCCTCTGTCATACC.......................................................................................................................................2513.0030000000000000000000000000000000200000001000000000000000000000000000000000000000
...................................................................GGAACTCGATTCTCCTCTGTCATC.........................................................................................................................................2412.0020020000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................CTGGAACTCGATTCTCCTCTGTCA...........................................................................................................................................2412.0020000000000000000000000000000001100000000000000000000000000000000000000000000000
............................................................................................................GCAGTGAGGGTGGGGTTTCCTT..................................................................................................2212.0020000000000000000000000000000100100000000000000000000000000000000000000000000000
............................................................................................................GCAGTGAGGGTGGGGTTTCCT...................................................................................................2112.0020000000001000000000000000000100000000000000000000000000000000000000000000000000
....................................................................GAACTCGATTCTCCTCTGTCCC..........................................................................................................................................2212.0020000000000000000000020000000000000000000000000000000000000000000000000000000000
.........................................................................................................ATGGCAGTGAGGGTGGGGTTC......................................................................................................2112.0020000000001000000000010000000000000000000000000000000000000000000000000000000000
.................................................................CTGGAACTCGATTCTCCTCTGTCAT..........................................................................................................................................2512.0020000000000000000000000100000100000000000000000000000000000000000000000000000000
..........................................................................................................TGGCAGTGAGGGTGGGGTTTCCA...................................................................................................2312.0020000000000000000000000000000001001000000000000000000000000000000000000000000000
...........................................................................................................GGCAGTGAGGGTGGGGTTTCCTTA.................................................................................................2412.0020000010000000000000000000000010000000000000000000000000000000000000000000000000
....................................................................GAACTCGATTCTCCTCTG..............................................................................................................................................1812.0020000000000000000000000000000100100000000000000000000000000000000000000000000000
.........................................................................................................ATGGCAGTGAGGGTGGGGTTT......................................................................................................2112.0020000000002000000000000000000000000000000000000000000000000000000000000000000000
....................................................................GAACTCGATTCTCCTCTGTCAAC.........................................................................................................................................2312.0020000000000000000000010000000000100000000000000000000000000000000000000000000000
....................................................................GAACTCGATTCTCCTCTGTCAGC.........................................................................................................................................2312.0020000000000000000000010000000000000000001000000000000000000000000000000000000000
............................................................................................................GCAGTGAGGGTGGGGTTTCC....................................................................................................2012.0020000000000000000000000000000010100000000000000000000000000000000000000000000000
...........................................................................................................GGCAGTGAGGGTGGGGTTTCCTCT.................................................................................................2412.0020000000000000000000000000000000000000001000000000000000000000100000000000000000
......................................................................ACTCGATTCTCCTCTGTCATA.........................................................................................................................................2112.0020010000000000000000000000000000100000000000000000000000000000000000000000000000
..........................................................................................................TGGCAGTGAGGGTGGGGTTTAT....................................................................................................2212.0020000000000000000000010000000010000000000000000000000000000000000000000000000000
..........................................................................................................TGGCAGTGAGGGTGGGGTTTCCTA..................................................................................................2412.0020000000000000000000000000000001001000000000000000000000000000000000000000000000
..........................................................................................................TGGCAGTGAGGGTGGGGTTTCCTTC.................................................................................................2512.0020000010000000000000000000000000100000000000000000000000000000000000000000000000
.....................................................................AACTCGATTCTCCTCTGTCATCC........................................................................................................................................2312.0021000000000000000000010000000000000000000000000000000000000000000000000000000000
.........................................................................................................ATGGCAGTGAGGGTGGGGTTTC.....................................................................................................2212.0020000000000000000000020000000000000000000000000000000000000000000000000000000000
....................................................................GAACTCGATTCTCCTCTGTCAG..........................................................................................................................................2212.0020000000000000000000010000000100000000000000000000000000000000000000000000000000
...........................................................................................................GGCAGTGAGGGTGGGGTTTC.....................................................................................................2012.0020000000000000000000000000000200000000000000000000000000000000000000000000000000
..................................................GATGTGGCATCTAAGCTGA...............................................................................................................................................................1911.0010000000000000000000000000000100000000000000000000000000000000000000000000000000
....................................................................GAACTCGATTCTCCTCTGTCAGCC........................................................................................................................................2411.0010000000000000000000010000000000000000000000000000000000000000000000000000000000
..............................................................................................................AGTGAGGGTGGGGTTTCCTT..................................................................................................2011.0010000000000000000000000000000001000000000000000000000000000000000000000000000000
...................................................................GGAACTCGATTCTCCTCTGTCAC..........................................................................................................................................2311.0010000000000000000000000000000010000000000000000000000000000000000000000000000000
..........................................................................................................TGGCAGTGAGGGTGGGGTTTATC...................................................................................................2311.0010000000000000000000000000000001000000000000000000000000000000000000000000000000
...................................................................GGAACTCGATTCTCCTCTGTCA...........................................................................................................................................2211.0010010000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................TGGAACTCGATTCTCCTCTG..............................................................................................................................................2011.0010000000000000000000000000000000100000000000000000000000000000000000000000000000
................................................GCGATGTGGCATCTAAGCTGA...............................................................................................................................................................2111.0010000000000000000000000000000000100000000000000000000000000000000000000000000000
............................................................................................................GCAGTGAGGGTGGGGTTTCCTTA.................................................................................................2311.0010000010000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................CTCGATTCTCCTCTGTCATAT........................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000001000000
..................................................GATGTGGCATCTAAGCTGG...............................................................................................................................................................1911.0010000000000000000000000000000000100000000000000000000000000000000000000000000000
...................................CTTGGATGATAACGCGATGTGGCATCT......................................................................................................................................................................2711.0010000000000000000010000000000000000000000000000000000000000000000000000000000000
.........................................................................................................ATGGCAGTGAGGGTGGGGTT.......................................................................................................2011.0010000000000000000000000000000000001000000000000000000000000000000000000000000000
droMoj3
G-------------------------------------------------ATGATGGCATCTAAGCTGGAACTCGATTCTCCTCTGTCATATGCAGCCGACAACTATGGCAGTGAGGGTGGGGTTTCCCTATT-----------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM046

Female-body		V041

Embryo		V049

Head		V056

Head		M060

Embryo		V110

Male-body
....................................................................GAACTCGATTCTCCTCTGTCA...........................................................................................................................................21171.00718032058
....................................................................GAACTCGATTCTCCTCTGTCAT..........................................................................................................................................22124.00248011014
....................................................................GAACTCGATTCTCCTCTGTCATA.........................................................................................................................................23112.0012300018
..........................................................................................................TGGCAGTGAGGGTGGGGTTTCC....................................................................................................2216.006000114
....................................................................GAACTCGATTCTCCTCTGTC............................................................................................................................................2014.004000004
..........................................................................................................TGGCAGTGAGGGTGGGGTTTC.....................................................................................................2114.004000004
..........................................................................................................TGGCAGTGAGGGTGGGGTTTCCC...................................................................................................2312.002010001
....................................................................GAACTCGATTCTCCTCTGTCATAT........................................................................................................................................2412.002100001
.....................................................................AACTCGATTCTCCTCTGTCA...........................................................................................................................................2012.002200000
....................................................................GAACTCGATTCTCCTCTGTCC...........................................................................................................................................2111.001000001
.....................................................................AACTCGATTCTCCTCTGTCATA.........................................................................................................................................2211.001100000
...........................................................................................................GGCAGTGAGGGTGGGGTTTCCTC..................................................................................................2311.001000001
......................................................................ACTCGATTCTCCTCTGTCAT..........................................................................................................................................2011.001100000
...........................................................................................................GGCAGTGAGGGTGGGGTTTCCCA..................................................................................................2311.001000001
..........................................................................................................TGGCAGTGAGGGTGGGGTTTCCCA..................................................................................................2411.001000001
....................................................................GAACTCGATTCTCCTCTGT.............................................................................................................................................1911.001000001
..........................................................................................................TGGCAGTGAGGGTGGGGTTTCT....................................................................................................2211.001000001
..........................................................................................................TGGCAGTGAGGGTGGGGTT.......................................................................................................1911.001000001

Generated: 10/20/2015 at 07:47 PM