ID:

dan_2302

 Coordinate:

scaffold_13335:3212863-3213013 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-9.3 -8.9 -8.5

Flybase annnotation

exon [dana_GLEANR_21637:9]; CDS [Dana\GF19570-cds]; intron [Dana\GF19570-in]

No Repeatable elements found

mature
  1. scaffold_12905:378782-378809 -
  2. scaffold_12905:404959-404986 -
  3. dan_2302  scaffold_13335:3212927-3212954 +
star
  1. scaffold_12905:378752-378777 -
  2. scaffold_13034:1852665-1852690 -
  3. scaffold_13034:1854855-1854880 -
  4. dan_2302  scaffold_13335:3212959-3212984 +

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
AAAATTCTCACACTCACCAGCGCAGTGGTAACATCCCAGAAAATGTAAATGTATGTCATGATTTTGTAATTTGAATTTTGTTTTTATATGCAAAAAATTGTAACGAATGCTAACTCCTACAATCATTTATGGGCTGAGGCGGATGGTAAAAACATGGGAACCAGCGCACGCTGGAATATCCGGCTTCGGCTCGTCGGCAAGGGGGGTGTTAATTGCCGGTTCCCAAGAGTGCCTCTCCAGGTAGGGATCTA
******************************************************************************************************************...............((.((((......(((.......)))......)))).))....******************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total M044
female body
 M058
embryo
 V039
embryo
 V105
male body		 V106
head
 V055
head
..................................................................................................................TCCTACAATCATTTATGGGCTGAGGCGG............................................................................................................. 28 0 3 9.67 29 25 3 1 0 0 0
..............................................................................................................................................................................................TCGTCGGCAAGGGGGGTGTTAATTG.................................... 25 0 2 5.50 11 10 1 0 0 0 0
..................................................................................................................TCCTACAATCATTTATGGGCTGAGG................................................................................................................ 25 0 4 4.00 16 10 3 2 1 0 0
..................................................................................................................TCCTACAATCATTTATGGGCTGAGGC............................................................................................................... 26 0 4 3.25 13 13 0 0 0 0 0
..................................................................................................................TCCTACAATCATTTATGGGCTGAGGCG.............................................................................................................. 27 0 4 3.25 13 12 1 0 0 0 0
..............................................................................................................................................................................................TCGTCGGCAAGGGGGGTGTTAATTGC................................... 26 0 2 3.00 6 3 1 2 0 0 0
..................................................................................................................................................TAAAAACATGGGAACCAGCGCACGCT............................................................................... 26 0 4 2.50 10 4 6 0 0 0 0
....................................................................................................TAACGAATGCTAACTCCTACAATCATT............................................................................................................................ 27 0 6 2.17 13 1 11 1 0 0 0
..................................................................................................................................................TAAAAACATGGGAACCAGCGCACGC................................................................................ 25 0 4 2.00 8 2 6 0 0 0 0
..................................................................................................................TCCTACAATCATTTATGGGCTGA.................................................................................................................. 23 0 4 1.75 7 0 0 6 0 1 0
................................................................................................................................................................................TATCCGGCTTCGGCTCGTCGGCAAG.................................................. 25 0 20 1.70 34 17 17 0 0 0 0
.....................................................................................................................TACAATCATTTATGGGCTGAGGCGG............................................................................................................. 25 0 5 1.60 8 3 5 0 0 0 0
................................................................................................................................................................................TATCCGGCTTCGGCTCGTCGGCAAGG................................................. 26 0 20 1.40 28 24 4 0 0 0 0
..................................................................................................................TCCTACAATCATTTATGGGCTGAG................................................................................................................. 24 0 4 1.25 5 3 0 2 0 0 0
.................................................................................................................................................................................................TCGGCAAGGGGGGTGTTAATTGC................................... 23 0 2 1.00 2 0 2 0 0 0 0
.......................................................................................................................CAATCATTTATGGGCTGAGGCGGATGG......................................................................................................... 27 0 1 1.00 1 1 0 0 0 0 0
..............................................................................................................................................................................................TCGTCGGCAAGGGGGGTGTTAAT...................................... 23 0 2 1.00 2 0 2 0 0 0 0
..................................................................................................................................................TAAAAACATGGGAACCAGCGCACG................................................................................. 24 0 4 1.00 4 2 0 0 0 2 0
...............ACCAGCGCAGTGGTAACATCCCAGAAAAT............................................................................................................................................................................................................... 29 0 1 1.00 1 0 1 0 0 0 0
...................................................................................................................CCTACAATCATTTATGGGCTGAGGCGG............................................................................................................. 27 0 3 1.00 3 3 0 0 0 0 0
.........................................................................................................................................GTCGGATGGTAAAAACATGGGAACC......................................................................................... 25 1 1 1.00 1 0 1 0 0 0 0
..............................................................................................................TAACTCCTACAATCATTTATGGGCT.................................................................................................................... 25 0 4 1.00 4 0 4 0 0 0 0
................................................ATGCATGTCATGCCTTTGTAATTT................................................................................................................................................................................... 24 3 1 1.00 1 0 0 1 0 0 0
...................GCGCAGTGGTAACATCCCAGA................................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0
..................................................................................................................TCCTACAATCATTTATGGGCTGAGGCGGA............................................................................................................ 29 0 1 1.00 1 0 1 0 0 0 0
...........................................................................................................................................................................TGGAATATCCGGCTTCGGCTCGTCGGC..................................................... 27 0 20 0.75 15 6 9 0 0 0 0
...................................................................................................................CCTACAATCATTTATGGGCTGAGGC............................................................................................................... 25 0 4 0.75 3 3 0 0 0 0 0
..............................................................................................................TAACTCCTACAATCATTTATGGGCTGA.................................................................................................................. 27 0 4 0.75 3 2 1 0 0 0 0
.............................................................................................................CTAACTCCTACAATCATTTATGGGCT.................................................................................................................... 26 0 4 0.75 3 0 3 0 0 0 0
........................................................................................................................................................................CGCTGGAATATCCGGCTTCGGCTCGT......................................................... 26 0 20 0.70 14 9 5 0 0 0 0
...........................................................................................................TGCTAACTCCTACAATCATTTATGGCC..................................................................................................................... 27 1 6 0.67 4 0 4 0 0 0 0
.............................................................................................................CTAACTCCTACAATCATTTATGGCC..................................................................................................................... 25 1 8 0.63 5 0 5 0 0 0 0
......................................................................................................................................................................CACGCTGGAATATCCGGCTTCGGC............................................................. 24 0 20 0.60 12 7 5 0 0 0 0
...........................................................................................................TGCTAACTCCTACAATCATTTATGGGC..................................................................................................................... 27 0 5 0.60 3 2 1 0 0 0 0
..................................................................................................................................................TAAAAACATGCGAACCAGCGCACGCT............................................................................... 26 1 5 0.60 3 0 3 0 0 0 0
...........................................................................................................................................................................TGGAATATCCGGCTTCGGCTCGTCGG...................................................... 26 0 20 0.60 12 10 2 0 0 0 0
...............................................................................................................................................................ACCAGCGCACGCTGGAATATCCGGC................................................................... 25 0 20 0.55 11 1 10 0 0 0 0
...................................................................................................................................................AAAAACATGGGAACCAGCGCACGCT............................................................................... 25 0 4 0.50 2 2 0 0 0 0 0
...............................................................................................................................................................................................CGTCGGCAAGGGGGGTGTTAATTG.................................... 24 0 2 0.50 1 1 0 0 0 0 0
.................................................................................................................................................................................................TCGGCAAGGGGGGTGTTAATTG.................................... 22 0 2 0.50 1 0 1 0 0 0 0
...................................................................................................................................................................................................................ATTGCCGGTTCCCAAGAGTGCC.................. 22 0 2 0.50 1 0 1 0 0 0 0
..............................................................................................................................................................................................TCGTCGGCAAGGGGGGTGTTAATTT.................................... 25 1 2 0.50 1 0 0 1 0 0 0
..............................................................................................................................................................................................TCGTCGGCAAGGGGGGTGTTAA....................................... 22 0 4 0.50 2 2 0 0 0 0 0
..............................................................................................................................................................................................TCGTCGGCAAGGGGGGTGTTAATTGCCG................................. 28 0 2 0.50 1 1 0 0 0 0 0
....................................................................................................................................................................................................GCAAGGGGGGTGTTAATTGCCGG................................ 23 0 2 0.50 1 1 0 0 0 0 0
....................................................................................................................................................................................................CCAAGGGGGGTGTTAATTGCCGG................................ 23 1 2 0.50 1 1 0 0 0 0 0
..................................................................................................................TCCTACAAGCATTTATGGGCTGAGG................................................................................................................ 25 1 4 0.50 2 2 0 0 0 0 0
...............................................................................................................................................TGGTAAAAACATGGGAACCAGCGCACGC................................................................................ 28 0 4 0.50 2 0 2 0 0 0 0
......................................................................................................................................................................................................AAGGGGGGAGTTAATTGCCGGTTCCC........................... 26 1 2 0.50 1 1 0 0 0 0 0
..............................................................................................................................................................................................TCGTCGGCAAGGGGGGTGTTAATTAC................................... 26 1 2 0.50 1 0 0 1 0 0 0
...................................................................................................................................................AAAAACATGGGAACCAGCGCACGC................................................................................ 24 0 4 0.50 2 2 0 0 0 0 0
.....................................................................................................................TACAATCATTTATGGGCTGAGGC............................................................................................................... 23 0 6 0.50 3 0 3 0 0 0 0
..............................................................................................................................................................................................TCGTCGGCAAGGGGGGCGTTAATTGC................................... 26 1 2 0.50 1 0 1 0 0 0 0
............................................................................................................................................................................................CATCGTCGGCAAGGGGGGTGTTAATTGC................................... 28 2 2 0.50 1 0 1 0 0 0 0
....................................................................................................................................................................................................GCAAGGGGGGTGTTAATTGCCGGTTC............................. 26 0 2 0.50 1 1 0 0 0 0 0
..................................................................................................................................................................................................................AATTGCCGGTTCCCAAGAGTGCCTCTC.............. 27 0 2 0.50 1 1 0 0 0 0 0
..............................................................................................................................................................................................TCGTCGGCAAGGGGGGTGTTAATT..................................... 24 0 2 0.50 1 1 0 0 0 0 0
.................................................................................................................................................................................................................TAATTGCCGGTTCCCAAGAGTGCCT................. 25 0 2 0.50 1 0 1 0 0 0 0
..................................................................................................................................................TAAAAACATGGGAACCAGCGCACGCTG.............................................................................. 27 0 4 0.50 2 2 0 0 0 0 0
.................................................................................................................................................................................................TCGGCAAGGGGGGTGTTAATTGCC.................................. 24 0 2 0.50 1 0 1 0 0 0 0
..............................................................................................................................................................................................TCGTCGGCAAGGGGGGGGTTAATTG.................................... 25 1 2 0.50 1 0 0 1 0 0 0
......................................................................................................................................................................................................AAGGGGGGTGTTAATTGCCGGTTCCC........................... 26 0 2 0.50 1 0 1 0 0 0 0
....................................................................................................................................................................................................GCAAGGGGGGTGTTAATTGC................................... 20 0 2 0.50 1 0 0 0 1 0 0
................................................................................................................................................................................................GTCGGCAAGGGGGGTGTTAATTGCCGG................................ 27 0 2 0.50 1 0 0 1 0 0 0
......................................................................................................................................................................................................AAGGGTGGTGTTAATTGCCGGCTC............................. 24 2 2 0.50 1 0 1 0 0 0 0
..............................................................................................................................................................................................................TGTTAATTGCCGGTTCCCAAGAGTGCC.................. 27 0 2 0.50 1 1 0 0 0 0 0
.............................................................................................................................................................................................CTCGTCGGGAAGGGGGGTGTTAATTG.................................... 26 1 2 0.50 1 1 0 0 0 0 0
...............................................................................................................................................TGGTAAAAACATGGGAACCAGCGCACG................................................................................. 27 0 4 0.50 2 2 0 0 0 0 0
................................................................................................................................................................................................GACGGCAAGGGGGGTGTTAATTGCCCG................................ 27 2 2 0.50 1 0 0 1 0 0 0
..............................................................................................................................................................................................................TGTTAATTGCCGGTTCCCAAGAGTGC................... 26 0 2 0.50 1 1 0 0 0 0 0
.....................................................................................................................................................................................................CAAGGGGGGTGTTAATTGC................................... 19 0 2 0.50 1 0 1 0 0 0 0
..................................................................................................................................................................................TCCGGCTTCGGCTCGTCGGCAAGG................................................. 24 0 20 0.45 9 9 0 0 0 0 0
.............................................................................................................CTAACTCCTACAATCATTTATGGGC..................................................................................................................... 25 0 7 0.43 3 0 3 0 0 0 0
...............................................................................................................................................TGGTAAAAACATGGGAACCAGCGCAC.................................................................................. 26 0 5 0.40 2 1 1 0 0 0 0
...............................................................................................................................................TGGTAAAAACATGGGAACCAGCGCA................................................................................... 25 0 5 0.40 2 1 0 1 0 0 0
......................................................................................................................................................AACATGGGAACCAGCGCACGCT............................................................................... 22 0 5 0.40 2 1 1 0 0 0 0
..............................................................................................................TAACTCCTACAATCATTTATGGCC..................................................................................................................... 24 1 8 0.38 3 0 3 0 0 0 0
..................................................................................................................................................................................TCCGGCTTCGGCTCGTCGGCAAGGG................................................ 25 0 20 0.35 7 5 2 0 0 0 0
...........................................................................................................TGCTAACTCCTACAATCATTTATGG....................................................................................................................... 25 0 6 0.33 2 1 1 0 0 0 0
........................................................................................................GAATGCTAACTCCTACAATCATT............................................................................................................................ 23 0 6 0.33 2 0 2 0 0 0 0
..................................................................................................................TCCTACAAGCATTTATGGGCTGAGGCGG............................................................................................................. 28 1 3 0.33 1 1 0 0 0 0 0
.........................................................................................................................................................................................................GGGGGTGCTAATTGCCGGTTCC............................ 22 1 3 0.33 1 0 1 0 0 0 0
..................................................................................................................TCATACAATCATTTATGGGCTGAGGCGG............................................................................................................. 28 1 3 0.33 1 0 1 0 0 0 0
..............................................................................................................................................................................................TCGTCGGCAAGGGGGGTGTTAATTGT................................... 26 1 3 0.33 1 0 1 0 0 0 0
.............................................................................................................................................................................GAATATCCGGCTTCGGCTCGTCGGC..................................................... 25 0 20 0.30 6 2 4 0 0 0 0
..................................................................................................................TCCTACAATCATTTATGGGC..................................................................................................................... 20 0 7 0.29 2 0 1 1 0 0 0
........................................................................................................................................................................CGCTGGAATATCCGGCTTCGGCTC........................................................... 24 0 20 0.25 5 1 4 0 0 0 0
...................................................................................................................CCTACAATCATTTATGGGCTGAGG................................................................................................................ 24 0 4 0.25 1 1 0 0 0 0 0
..................................................................................................................................................TAATAACATGGGAACCAGCGCACGC................................................................................ 25 1 4 0.25 1 0 1 0 0 0 0
..................................................................................................................TCCTACAAGCATTTATGGGCTGAGGCG.............................................................................................................. 27 1 4 0.25 1 1 0 0 0 0 0
..................................................................................................................................................................................TCCGGCTTCGGCTCGTCGGCAAGGGG............................................... 26 0 20 0.25 5 5 0 0 0 0 0
........................................................................................................................................................................CGCTGGAATATCCGGCTTCGGC............................................................. 22 0 20 0.25 5 2 1 2 0 0 0
.................................................................................................................................................GTAAAAACATGGGAACCAGCGCACGCT............................................................................... 27 0 4 0.25 1 1 0 0 0 0 0
..................................................................................................................TCCTACAATCATTTACGGGCTGAGG................................................................................................................ 25 1 4 0.25 1 1 0 0 0 0 0
...............................................................................................................AACTCCTACAATCATTTATGGGCTGAG................................................................................................................. 27 0 4 0.25 1 1 0 0 0 0 0
.................................................................................................................................................GTATAAACATGGGAACCAGCGCACGCT............................................................................... 27 1 4 0.25 1 0 1 0 0 0 0
..................................................................................................................TCCTACACTCATTTCTGGGCTGAGG................................................................................................................ 25 2 4 0.25 1 0 0 1 0 0 0
.................................................................................................................................................GTAAAAACATGGGAACCAGCGCACGC................................................................................ 26 0 4 0.25 1 0 1 0 0 0 0
..................................................................................................................TCCTACAATCATTTATGGGCTTG.................................................................................................................. 23 2 4 0.25 1 0 0 1 0 0 0
..................................................................................................................................................TAAAAACACGGGAACCAGCGCGCGCT............................................................................... 26 2 4 0.25 1 1 0 0 0 0 0
..............................................................................................................TAACTCCTACAATCATTTATGGGCTGAGG................................................................................................................ 29 0 4 0.25 1 1 0 0 0 0 0
...................................................................................................................CCTACAATCATTTATGGGCTGAGGCG.............................................................................................................. 26 0 4 0.25 1 1 0 0 0 0 0
.............................................................................................................CGAACTCCTACACTCATTTATGGTCT.................................................................................................................... 26 3 4 0.25 1 0 1 0 0 0 0
..................................................................................................................TCCTACAATCCTTTATGCGCTTA.................................................................................................................. 23 3 4 0.25 1 0 0 1 0 0 0
..................................................................................................................................................TAAAAACATGGGAACCAGCGCACGCC............................................................................... 26 1 4 0.25 1 0 1 0 0 0 0
........................................................................................................................................................................CGCTGGAATATCCGGCTTCGGCTCGTC........................................................ 27 0 20 0.25 5 4 1 0 0 0 0
..................................................................................................................TCCTACACTCATTTATGGGCTGAGG................................................................................................................ 25 1 4 0.25 1 0 0 1 0 0 0
..................................................................................................................TCCTACAAGCATTTATGGGCTGAGGC............................................................................................................... 26 1 4 0.25 1 1 0 0 0 0 0
..................................................................................................................TCCTACAATCATTTATGGTCTGAG................................................................................................................. 24 1 4 0.25 1 0 0 1 0 0 0
..................................................................................................................................................TAAAAACATGGGCACCATCGCCCGC................................................................................ 25 3 4 0.25 1 0 1 0 0 0 0
..................................................................................................................TCCTACAATCATTTATGGGCTGAGGCGT............................................................................................................. 28 1 4 0.25 1 0 1 0 0 0 0
..................................................................................................................TCCTACAATCATTTATCGACTCA.................................................................................................................. 23 3 4 0.25 1 0 0 1 0 0 0
..............................................................................................................TAACTCCTACAATCATTTATGGGCTGAG................................................................................................................. 28 0 4 0.25 1 0 1 0 0 0 0
...........................................................................................................TGCTAACTCCTACAATCATTTATGGG...................................................................................................................... 26 0 5 0.20 1 1 0 0 0 0 0
.........................................................................................................................................................................GCTGGAATATCCGGCTTCGGCTCGT......................................................... 25 0 20 0.20 4 1 3 0 0 0 0
.................................................................................................................................................TTAAAAACATGGGAACCAGCGCAC.................................................................................. 24 1 5 0.20 1 1 0 0 0 0 0
................................................................................................................................................GATCAAAACAAGGGAACCAGCGCACGC................................................................................ 27 3 5 0.20 1 0 1 0 0 0 0
..................................................................................................................................................TAAAAACATGGGAACCAGCGCAC.................................................................................. 23 0 5 0.20 1 0 1 0 0 0 0
................................................................................................................................................................................TATCCGGCTTCGGCTCGTCGGCAAGGG................................................ 27 0 20 0.20 4 3 1 0 0 0 0
.....................................................................................................................TACAATCATTTATGGGCTGAGGCTG............................................................................................................. 25 1 5 0.20 1 0 0 1 0 0 0
......................................................................................................................................................AACATGGGAACCAGCGCACGC................................................................................ 21 0 5 0.20 1 0 1 0 0 0 0
.........................................................................................................................................................................GCTGGAATATCCGGCTTCGGCTCGTC........................................................ 26 0 20 0.20 4 2 2 0 0 0 0
...............................................................................................................................................TGGTAAAAACATGGGAACCAGCGCACT................................................................................. 27 1 5 0.20 1 1 0 0 0 0 0
.................................................................................................................................................ATAAAAACAAGGGAACCAGCGCACGC................................................................................ 26 2 5 0.20 1 0 1 0 0 0 0
........................................................................................................................................................................................TTCGGCTCGTCGGCAAGGGGGGTG........................................... 24 0 20 0.20 4 4 0 0 0 0 0
................................................................................................................................................................................TATCCGGCTTCGGCTCGTCGGCA.................................................... 23 0 20 0.20 4 4 0 0 0 0 0
.......................................................................................................................CAATCATTTATGGGCTGAGGC............................................................................................................... 21 0 6 0.17 1 0 1 0 0 0 0
........................................................................................................GAATGCTAACTCCTACAATCATTTAT......................................................................................................................... 26 0 6 0.17 1 1 0 0 0 0 0
...........................................................................................................TGCTAACTCCTACAATCATTTATGGT...................................................................................................................... 26 1 6 0.17 1 0 1 0 0 0 0
....................................................................................................TAATGAATGCTAACTCCTACAATCA.............................................................................................................................. 25 1 6 0.17 1 0 1 0 0 0 0
..............................................................................................................TAACTCCTACAATCATTTATGGCTTG................................................................................................................... 26 2 6 0.17 1 0 0 1 0 0 0
..................................................................................................................................................TAAAATCAAGGGAACCAGCGCAC.................................................................................. 23 2 6 0.17 1 0 1 0 0 0 0
.....................................................................................................................TACAATCATTTATGGGCTGAGGCG.............................................................................................................. 24 0 6 0.17 1 1 0 0 0 0 0
....................................................................................................TAACGAATGCTAACTCCTACAATCATTTA.......................................................................................................................... 29 0 6 0.17 1 0 1 0 0 0 0
....................................................................................................TGACGAATGCTAACTCCTACAATCATT............................................................................................................................ 27 1 6 0.17 1 0 1 0 0 0 0
..................................................................................................TTTAACGAATGCTAACTCCTACAATC............................................................................................................................... 26 1 6 0.17 1 0 1 0 0 0 0
....................................................................................................TAACGAATGCTAACTCCTACAATC............................................................................................................................... 24 0 6 0.17 1 0 1 0 0 0 0
............................................................................................................GCTAACTCCTACAATCATTTATGGG...................................................................................................................... 25 0 6 0.17 1 1 0 0 0 0 0
.........................................................................................................AATGCTAACTCCTACAATCATTTATG........................................................................................................................ 26 0 6 0.17 1 0 1 0 0 0 0
.....................................................................................................AACGAATGCTAACTCCTACAATCATT............................................................................................................................ 26 0 6 0.17 1 1 0 0 0 0 0
...........................................................................................................................................................................TGGAATATCCGGCTTCGGCTCGTC........................................................ 24 0 20 0.15 3 1 0 2 0 0 0
.................................................................................................................................................................................ATCCGGCTTCGGCTCGTCGGCAAGGG................................................ 26 0 20 0.15 3 2 1 0 0 0 0
...........................................................................................................................................................................TGGAATATCCGGCTTCGGCTCGTCG....................................................... 25 0 20 0.15 3 1 2 0 0 0 0
................................................................................................................................................................................TATCCGGCTTCGGCTCGTCGGC..................................................... 22 0 20 0.15 3 1 2 0 0 0 0
.............................................................................................................................................................GAACCAGCGCACGCTGGAATATCCGGC................................................................... 27 0 20 0.15 3 0 3 0 0 0 0
.........................................................................................................................................................................................TCGGCTCGTCGGCAAGGGG............................................... 19 0 20 0.15 3 3 0 0 0 0 0
..........................................................................................................................................................................CTGGAATATCCGGCTTCGGCTCGTC........................................................ 25 0 20 0.15 3 1 2 0 0 0 0
.............................................................................................................TTAACTCCTACAATCATTTATGGG...................................................................................................................... 24 1 7 0.14 1 0 1 0 0 0 0
..............................................................................................................TAACTCCTACAATCATTTATGGGC..................................................................................................................... 24 0 7 0.14 1 0 0 1 0 0 0
............................................................................................................GCTAACTCCTACAATCATTTATGG....................................................................................................................... 24 0 7 0.14 1 1 0 0 0 0 0
..............................................................................................................TGACTCCTACAATCATTTATGGGC..................................................................................................................... 24 1 7 0.14 1 0 1 0 0 0 0
...........................................................................................................GGCTAACTCCTACAATCATTTATGG....................................................................................................................... 25 1 7 0.14 1 0 1 0 0 0 0
.....................................................................................................................TAAAATCATTTATGGGCTGAGGCGG............................................................................................................. 25 1 7 0.14 1 0 1 0 0 0 0
..............................................................................................................TAACTCCTACAATCATTTATGGGCC.................................................................................................................... 25 1 7 0.14 1 0 1 0 0 0 0
..............................................................................................................TAACTCCTACAATCATTTATGGAC..................................................................................................................... 24 1 8 0.13 1 0 1 0 0 0 0
...................................................................................................CTAACTAATGCTAACTCCTACAATCATC............................................................................................................................ 28 3 8 0.13 1 0 1 0 0 0 0
............................................................................................................CCTAACTCCTACAATCATTTATGGAC..................................................................................................................... 26 2 8 0.13 1 0 1 0 0 0 0
.............................................................................................................CTATCTCCTACAATCATTTATGGCC..................................................................................................................... 25 2 8 0.13 1 0 1 0 0 0 0
...........................................................................................AAAAATTTTTAACGAATGC............................................................................................................................................. 19 2 9 0.11 1 0 0 0 0 0 1
................................................................................................................................................................................TATCCGGCTTCGGCTCGTCGG...................................................... 21 0 20 0.10 2 0 1 1 0 0 0
.............................................................................................................................................................................GAATATCCGGCTTCGGCTCGTCGG...................................................... 24 0 20 0.10 2 2 0 0 0 0 0
............................................................................................................................................................................GGAATATCCGGCTTCGGCTCGTCGGC..................................................... 26 0 20 0.10 2 0 2 0 0 0 0
...........................................................................................................................................................................TTGAATATCCGGCTTCGGCTCGTCGGC..................................................... 27 1 20 0.10 2 0 2 0 0 0 0
...........................................................................................................................................................................TGGAATATCCGGCTTCGGCTCCTC........................................................ 24 1 20 0.10 2 0 1 1 0 0 0
.............................................................................................................................................................................GAATATCCGGCTTCGGCTCGTCGGCAAG.................................................. 28 0 20 0.10 2 2 0 0 0 0 0
................................................................................................................................................................................TATCCGGCTTCGGCTCGTCGGCAA................................................... 24 0 20 0.10 2 2 0 0 0 0 0
........................................................................................................................................................................CGCTGGAATATCCGGCTTCGGCT............................................................ 23 0 20 0.10 2 0 2 0 0 0 0
......................................................................................................................................................................CACGCTGGAATATCCGGCTTCGGCTC........................................................... 26 0 20 0.10 2 0 2 0 0 0 0
.......................................................................................................................................................................ACGCTGGAATATCCGGCTTCGGCTC........................................................... 25 0 20 0.10 2 0 2 0 0 0 0
.........................................................................................................................................................................GCTGGAATATCCGGCTTCGGCTCGC......................................................... 25 1 20 0.10 2 0 2 0 0 0 0
...........................................................................................................................................................................TGGAATATCCGGCTTCGGCTCGT......................................................... 23 0 20 0.10 2 1 1 0 0 0 0
........................................................................................................................................................................CGCTGGAATATCCGGCTTCGGCTCG.......................................................... 25 0 20 0.10 2 1 1 0 0 0 0
................................................................................................................................................................................TATCCGGCTTCGGCTCGTCGGCAAGGGG............................................... 28 0 20 0.10 2 2 0 0 0 0 0
..................................................................................................................................................................................TCCGGCTTCGGCTCGTCGGCAAG.................................................. 23 0 20 0.10 2 0 2 0 0 0 0
..................................................................................................................................................................................TCCGGCTTCGGCTCGTCGGCAAGGGGG.............................................. 27 0 20 0.10 2 2 0 0 0 0 0
................................................................................................................................................................................TATCCGGCTTCGGCTCGTCGGCAAA.................................................. 25 1 20 0.10 2 1 1 0 0 0 0
...ATTCTAACGCTCACAAGCG..................................................................................................................................................................................................................................... 19 3 15 0.07 1 0 0 1 0 0 0
............................................................................................................................ATTTCTGGGATGAGGTGGAT........................................................................................................... 20 3 15 0.07 1 1 0 0 0 0 0
........................................................................................................................................................................................TTCGGCTCGTCGGCAAGGGGGGTGT.......................................... 25 0 20 0.05 1 1 0 0 0 0 0
................................................................................................................................................................................TATCCGGCTTCGGCTCGTCGGCAAAA................................................. 26 2 20 0.05 1 1 0 0 0 0 0
.......................................................................................................................................................................ACGCTGGAATACCCGGCTTCGGC............................................................. 23 1 20 0.05 1 0 0 1 0 0 0
..........................................................................................................................................................................CTGGAATATCCGGCTTCGGCTCGTCGGC..................................................... 28 0 20 0.05 1 0 1 0 0 0 0
.............................................................................................................................................................................GAATATCCAGCTTCGGCTCGTCG....................................................... 23 1 20 0.05 1 1 0 0 0 0 0
...........................................................................................................................................................................TGGAATATCCGGCTTCGGCTCGC......................................................... 23 1 20 0.05 1 0 1 0 0 0 0
..........................................................................................................................................................................CGGGAATATCCGGCTTCGGCTCGTCGGC..................................................... 28 1 20 0.05 1 0 1 0 0 0 0
.........................................................................................................................................................................GCTGGAATGTCCGGCTTCGGCTCGTC........................................................ 26 1 20 0.05 1 1 0 0 0 0 0
........................................................................................................................................................................................TTCGGCTCGTCGGCAAGGGG............................................... 20 0 20 0.05 1 1 0 0 0 0 0
........................................................................................................................................................................................TTCGGCTCGTCGGCAAGGGGC.............................................. 21 1 20 0.05 1 0 1 0 0 0 0
........................................................................................................................................................................CGCTGGAATATCCGGCTTCGTCTCGT......................................................... 26 1 20 0.05 1 0 1 0 0 0 0
.............................................................................................................CGATCTCCTACAATCATTTATGG....................................................................................................................... 23 2 20 0.05 1 0 1 0 0 0 0
..............................................................................................................................................................AACCAGCGCACGCTGGAATATCCGGCTTC................................................................ 29 0 20 0.05 1 0 1 0 0 0 0
...............................................................................................................................................................ACCAGCGCACGCTGGAATATCCGGCC.................................................................. 26 1 20 0.05 1 0 1 0 0 0 0
.........................................................................................................................................................................................TCGGCTCGTCGGCAAGGGGGGTG........................................... 23 0 20 0.05 1 0 1 0 0 0 0
...................................................................................................................................................................................CCGGCTTCGGCTCGTCGGCAAG.................................................. 22 0 20 0.05 1 1 0 0 0 0 0
................................................................................................................................................................................TATCCGGCTTCGGCTCGTCG....................................................... 20 0 20 0.05 1 1 0 0 0 0 0
.....................................................................................................................................................................GCACGCTGGAATATCCGGCTTCGGC............................................................. 25 0 20 0.05 1 1 0 0 0 0 0
.........................................................................................................................................................................................TTGGCTCGTCGGCAAGGGGGGT............................................ 22 1 20 0.05 1 0 1 0 0 0 0
...............................................................................................................................................................ACCAGCGCACGCTGGAATATCCGGCTTCG............................................................... 29 0 20 0.05 1 0 1 0 0 0 0
........................................................................................................................................................................CGCTGGAATATCCAGCTTCGGCTC........................................................... 24 1 20 0.05 1 0 1 0 0 0 0
...............................................................................................................................................................................ATATCCGGCTTCGGCTCGTC........................................................ 20 0 20 0.05 1 0 1 0 0 0 0
........................................................................................................................................................................................TTCGGCTCTTCGGCAAGGGGGGTG........................................... 24 1 20 0.05 1 1 0 0 0 0 0
................................................................................................................................................................................TATCCGGCTTCGGCTCGCCGGCCAG.................................................. 25 2 20 0.05 1 0 0 1 0 0 0
...........................................................................................................................................................................TTGAATATCCGGCTTCGGCTCGTC........................................................ 24 1 20 0.05 1 0 1 0 0 0 0
................................................................................................................................................................................TATCCGGCTACGGCTCGTCGGCAAG.................................................. 25 1 20 0.05 1 0 1 0 0 0 0
........................................................................................................................................................................CGCTGGAATATCCGGCTTCGGCTCGTCG....................................................... 28 0 20 0.05 1 1 0 0 0 0 0
........................................................................................................................................................................CTCTGGAATATCCGGCTTCGGCTC........................................................... 24 1 20 0.05 1 0 1 0 0 0 0
................................................................................................................................................................................TATCCGGCCTCGGCTCGTCGGCAAG.................................................. 25 1 20 0.05 1 1 0 0 0 0 0
................................................................................................................................................................................TATCCGGCTTCGGCTCGTCGGCAAGA................................................. 26 1 20 0.05 1 1 0 0 0 0 0
.............................................................................................................................................................................GAATATCCGGCTTCGGCTCGTCG....................................................... 23 0 20 0.05 1 1 0 0 0 0 0
...........................................................................................................................................................................TGGAATATGCGGCTTCGGCTCGTCGGCA.................................................... 28 1 20 0.05 1 1 0 0 0 0 0
..................................................................................................................................................................................TCAGGCTTCGGCTCGTCGGCAAGG................................................. 24 1 20 0.05 1 0 1 0 0 0 0
.........................................................................................................................................................................................TCGGCTCGTCGGCAAGGGGGGT............................................ 22 0 20 0.05 1 0 1 0 0 0 0
........................................................................................................................................................................CACTGGAATATCCGGCTTCGGCTCCT......................................................... 26 2 20 0.05 1 0 0 1 0 0 0
........................................................................................................................................................................CGCTGGAATATCCGGCTTCGGCTCC.......................................................... 25 1 20 0.05 1 0 1 0 0 0 0
..............................................................................................................................................................AACCAGCGCACGCTGGAATATCCGGC................................................................... 26 0 20 0.05 1 0 1 0 0 0 0
..........................................................................................................................................................................CTGGAATATCCGGCTTCGGC............................................................. 20 0 20 0.05 1 0 1 0 0 0 0
........................................................................................................................................................................CGCTGGACTATCCGGCTTCGGCTC........................................................... 24 1 20 0.05 1 0 1 0 0 0 0
.......................................................................................................................................................................................CTTCGGCTCGTCGGCAAGGGG............................................... 21 0 20 0.05 1 1 0 0 0 0 0
.................................................................................................................................................................................ATCCGGCTTCGGCTCGTCGGCAAG.................................................. 24 0 20 0.05 1 1 0 0 0 0 0
............................................................................................................................................................................GGAATATCCGGCTTCGGCTCGTCGA...................................................... 25 1 20 0.05 1 1 0 0 0 0 0
................................................................................................................................................................CCAGCGCACGCTGGAATATCCGGCT.................................................................. 25 0 20 0.05 1 0 1 0 0 0 0
...............................................................................................................................................................ACCAGCGCACGCTGGAATATCCGG.................................................................... 24 0 20 0.05 1 1 0 0 0 0 0
..............................................................................................................................................................AACCAGCGCACGCTGGAATATCCGGCT.................................................................. 27 0 20 0.05 1 1 0 0 0 0 0
............................................................................................................................................................................GGAATATCCGGCTTCGGCTCG.......................................................... 21 0 20 0.05 1 0 1 0 0 0 0
................................................................................................................................................................CCAGCGCACGCTGGAATATCCGGCTTC................................................................ 27 0 20 0.05 1 0 1 0 0 0 0
..........................................................................................................................................................................................GATCTCGTCGGCAAGGGGGGTG........................................... 22 3 20 0.05 1 0 1 0 0 0 0
..................................................................................................................................................................................TGCGGCTTCGGCTCGTCGGCAAGG................................................. 24 1 20 0.05 1 0 1 0 0 0 0
....................................................................................................................................................................CGCACGCTGGAATATCCGGCTTCGGC............................................................. 26 0 20 0.05 1 1 0 0 0 0 0
..........................................................................................................................................................................CGGGAATATCCGGCTTCGGCTC........................................................... 22 1 20 0.05 1 0 1 0 0 0 0
.........................................................................................................................................................................................TCGGCTCGTCGGCAAGGGGG.............................................. 20 0 20 0.05 1 1 0 0 0 0 0
..............................................................................................................................................................................AATATCCGGCTTCGGCTCGTC........................................................ 21 0 20 0.05 1 1 0 0 0 0 0
...............................................................................................................................................................ACCAGCGCACGCTGGAATATCCGGCTTC................................................................ 28 0 20 0.05 1 0 1 0 0 0 0
................................................................................................................................................................................TATCCGGCTTCGGCTCGTCGGCAAGGC................................................ 27 1 20 0.05 1 0 1 0 0 0 0
.........................................................................................................................................................................GCTGGAATATCCGGCTTCGGCTCG.......................................................... 24 0 20 0.05 1 1 0 0 0 0 0
........................................................................................................................................................................CGCTGGAATATCCGGCTTCGGCC............................................................ 23 1 20 0.05 1 0 1 0 0 0 0
........................................................................................................................................................................CTCTGGAATATCCGGCTTCGGCT............................................................ 23 1 20 0.05 1 0 1 0 0 0 0
.....................................................................................................................................................................................GGCTTCGGCTCGTCGGCAAGGG................................................ 22 0 20 0.05 1 0 1 0 0 0 0
......................................................................................................................................................................CACGCTTGAATATCCGTCTTCGTC............................................................. 24 3 20 0.05 1 0 1 0 0 0 0
.........................................................................................................................................................................GCTGGAATATCCGGCTTCGGCTC........................................................... 23 0 20 0.05 1 0 1 0 0 0 0
................................................................................................................................................................................TATCCGGCTTCGGCTCCTCGG...................................................... 21 1 20 0.05 1 0 0 1 0 0 0
.........................................................................................................................................................................................TCGGCTCGTCGGCAAGGGGGG............................................. 21 0 20 0.05 1 0 1 0 0 0 0
..................................................................................................................................................................................TCCGGCTTCGGCTCCTCGGCAAGCGGG.............................................. 27 2 20 0.05 1 0 0 1 0 0 0
........................................................................................................................................................................................TTCGGCTCGTCGGCAAGGG................................................ 19 0 20 0.05 1 0 0 1 0 0 0
........................................................................................................................................................................................TTCGGCTCGTCGGCAAGGGGGG............................................. 22 0 20 0.05 1 0 1 0 0 0 0
......................................................................................................................................................................CACGCTGGAATATCCGGCTTCGG.............................................................. 23 0 20 0.05 1 1 0 0 0 0 0
................................................................................................................................................................................TATCCGGCTTCGGCTCGTCGGCATT.................................................. 25 2 20 0.05 1 0 1 0 0 0 0
..................................................................................................................................................................................TCCGGCTTCGGCTCGTCGGCAAGGGGGG............................................. 28 0 20 0.05 1 0 1 0 0 0 0
...................................................................................................................................................................GCGCACGCTGGAATATCCGGCTTCG............................................................... 25 0 20 0.05 1 0 0 0 0 1 0
................................................................................................................................................................................TATCCGGCTTCGGCTCGTCGGCAGGG................................................. 26 1 20 0.05 1 1 0 0 0 0 0
........................................................................................................................................................................................TTCGGCTCGTCGGCAAGGGGG.............................................. 21 0 20 0.05 1 0 0 0 0 0 1
..................................................................................................................................................................................TCCGGCTTCGGCTCGTCGGCAAGGGA............................................... 26 1 20 0.05 1 1 0 0 0 0 0
.............................................................................................................................................................................GAATATCCGGCTTCGGCTCGTCGAC..................................................... 25 1 20 0.05 1 0 1 0 0 0 0
......................................................................................................................................................................CACGCTGGAATATCCGGCTTCGGCTCG.......................................................... 27 0 20 0.05 1 1 0 0 0 0 0
................................................................................................................................................................................TATCCGGCTTCGGCTCGTCGGCAAT.................................................. 25 1 20 0.05 1 0 1 0 0 0 0
...........................................................................................................................................................................TTGTATATCCGGCTTCGGCTCGTCGGC..................................................... 27 2 20 0.05 1 0 1 0 0 0 0
......................................................................................................................................................................CACGCTGGAATATCCGGCTTCGGCTCGTC........................................................ 29 0 20 0.05 1 1 0 0 0 0 0
.............................................................................................................................................................................GAATATCCGGCTTCGGCTCGTCTGC..................................................... 25 1 20 0.05 1 0 1 0 0 0 0
...........................................................................................................................................................................TTGAATATCCGGCTTCGGCTCGT......................................................... 23 1 20 0.05 1 0 1 0 0 0 0
..................................................................................................................................................................................TCCGGCTTCGGCTCGACGGCAAGGGG............................................... 26 1 20 0.05 1 0 1 0 0 0 0
..............................................................................................................................................................AACCAGCGCACGCTGGAATATCCGG.................................................................... 25 0 20 0.05 1 1 0 0 0 0 0
..........................................................................................................................................................................CTGGAATATCCGGCTTCGGCTCG.......................................................... 23 0 20 0.05 1 1 0 0 0 0 0
.............................................................................................................................................................................GAAGATCCAGGTTCGGCTC........................................................... 19 3 20 0.05 1 0 0 0 1 0 0
.............................................................................................................................................................................GAATATCCGGCTTCGGCTCGTCGGCA.................................................... 26 0 20 0.05 1 1 0 0 0 0 0
......................................................................................................................................................................CGCGCTGGAATATCCGGCTTCGGCTC........................................................... 26 1 20 0.05 1 0 1 0 0 0 0
..........................................................................................................................................................................CTGGAATATCCGGCTTCGGCTCGTCG....................................................... 26 0 20 0.05 1 1 0 0 0 0 0
...................................................................................................................................................................................CCGGCTTCGGCTCGTCGGCAAGGG................................................ 24 0 20 0.05 1 1 0 0 0 0 0
........................................................................................................................................................................CGCCGGAATATCCGGCTTCGGC............................................................. 22 1 20 0.05 1 0 1 0 0 0 0

Anti-sense strand reads

TTTTAAGAGTGTGAGTGGTCGCGTCACCATTGTAGGGTCTTTTACATTTACATACAGTACTAAAACATTAAACTTAAAACAAAAATATACGTTTTTTAACATTGCTTACGATTGAGGATGTTAGTAAATACCCGACTCCGCCTACCATTTTTGTACCCTTGGTCGCGTGCGACCTTATAGGCCGAAGCCGAGCAGCCGTTCCCCCCACAATTAACGGCCAAGGGTTCTCACGGAGAGGTCCATCCCTAGAT
*******************************************************************************...............((.((((......(((.......)))......)))).))....****************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M058
embryo
 M044
female body
 V039
embryo
 V105
male body		 V055
head
...................................................................................................................................................................CGCGTGCGACCTTATAGGCCGAA................................................................. 23 0 20 2.65 53 53 0 0 0 0
..................................................................................................ACATTGCTTACGATTGAGGATGTTAG............................................................................................................................... 26 0 6 1.17 7 0 7 0 0 0
....................................................................................................................................................................................................CGTTCCCCCCACAATTAACGGGC................................ 23 1 2 1.00 2 2 0 0 0 0
....................................................................................................................................................................................................CGTTCCCCCCACAATTAACGGCC................................ 23 0 2 1.00 2 1 1 0 0 0
....................................................................................................ATTGCTTACGATTGAGGATGTTAG............................................................................................................................... 24 0 6 1.00 6 1 5 0 0 0
.....................................................................................................TTGCTTACGATTGAGGATGTTAG............................................................................................................................... 23 0 6 0.67 4 2 2 0 0 0
......................................................................................................TGCTTACGATTGAGGATGTTAG............................................................................................................................... 22 0 6 0.67 4 2 1 0 1 0
....................................................................................................................................................................................................CGTTCCCCCCACAATTAACGGC................................. 22 0 2 0.50 1 1 0 0 0 0
........................................................................................................................................................................................................CCCCCCACAATTAACGGCCAAGGGTTCT....................... 28 0 2 0.50 1 0 1 0 0 0
..................................................................................................................................................................................................GCCGTTCCCCCCACAATTAACG................................... 22 0 2 0.50 1 1 0 0 0 0
.............................................................................................................................................................................................GAGCAGCCGTTCCCCCCACAATTAAC.................................... 26 0 2 0.50 1 0 1 0 0 0
..........................................................................................................................................................................................................CCCCACAATTAACGGCCAAGGGTTCT....................... 26 0 2 0.50 1 0 1 0 0 0
............................................................................................................................................................................................................CCACAATTAACGGCCAAGGGTTCTCGC.................... 27 1 2 0.50 1 1 0 0 0 0
.....................................................................................................................................................................................................GTTCCCCCCACAATTAACGGCC................................ 22 0 2 0.50 1 0 1 0 0 0
....................................................................................................................................................................................................CGTTCCCCCCACAATTAACGGCCAAG............................. 26 0 2 0.50 1 1 0 0 0 0
....................................................................................................................................................................................................CGTTCCCCCCACAATTAACGGCCA............................... 24 0 2 0.50 1 1 0 0 0 0
.............................................................................................................................................................................................GAGCAGCCGTTCCCCCCACAATTAA..................................... 25 0 2 0.50 1 0 1 0 0 0
...................................................................................................................................................................CGCGTGCGACCTTATAGGCCGAAGC............................................................... 25 0 20 0.45 9 9 0 0 0 0
...................................................................................................CATTGCTTACGATTGAGGATGTTAG............................................................................................................................... 25 0 6 0.33 2 2 0 0 0 0
.......................................................................................................................................................................................................TCCCCCCACAATTAACGGCCAAG............................. 23 0 3 0.33 1 1 0 0 0 0
..............................................................................................................................................................TTGGTCGCGTGCGACCTTATAGGCCGAA................................................................. 28 0 20 0.30 6 6 0 0 0 0
...................................................................................................................................................................CGCGTGCGACCTTATAGGCCCAA................................................................. 23 1 20 0.30 6 6 0 0 0 0
...................................................................................................................................................................CGCGTGCGACCTTATAGGCCGAAGCC.............................................................. 26 0 20 0.30 6 5 1 0 0 0
........................................................................................................................................................................................AAGCCGAGCAGCCGTTCCCCCCACAATT....................................... 28 0 4 0.25 1 1 0 0 0 0
..................................................................................................................................................................TCGCGTGCGACCTTATAGGCCGAA................................................................. 24 0 20 0.25 5 5 0 0 0 0
.........................................................................................................................................................................CGACCTTATAGGCCGAAGCCGAGCAG........................................................ 26 0 20 0.25 5 4 0 1 0 0
..................................................................................................................................................................TCGCGTGCGACCTTATAGGCC.................................................................... 21 0 20 0.25 5 5 0 0 0 0
......................................................................................................TGCTTAGGATTGAGGAGGTTAGTAA............................................................................................................................ 25 2 6 0.17 1 0 0 1 0 0
......................................................................................................CGCTTACGATTGAGGATGTTAG............................................................................................................................... 22 1 6 0.17 1 1 0 0 0 0
..................................................................................................ACATTGCTTACGATTGAGGATGTTA................................................................................................................................ 25 0 6 0.17 1 0 1 0 0 0
...................................................................................................CATTGCTTACGATTGAGGAGG................................................................................................................................... 21 1 6 0.17 1 1 0 0 0 0
........................................................................................................................................................................GCGACCTTATAGGCCGAAGCCGAGCAG........................................................ 27 0 20 0.15 3 1 2 0 0 0
............................................................................................................................................................................................CGAGCAGCCGTTCCCCCCA............................................ 19 0 20 0.15 3 1 0 2 0 0
.............................................................................................................................................................CTTGGTCGCGTGCGACCTTATAGGCCGAA................................................................. 29 0 20 0.15 3 3 0 0 0 0
...................................................................................................................................................................CGCGTGCGACCTTATAGGCCGAATC............................................................... 25 1 20 0.15 3 3 0 0 0 0
...............................................................................................................................................................TGGTCGCGTGCGACCTTATAGGCCGAA................................................................. 27 0 20 0.15 3 2 1 0 0 0
...................................................................................................................................................................CGCGTGCGACCTTATAGGCC.................................................................... 20 0 20 0.15 3 3 0 0 0 0
............................................................................................................CGATTGAGGATGTTAGTAAATA......................................................................................................................... 22 0 7 0.14 1 0 1 0 0 0
....................................................................................................................................................................................................................................CACGGAGAGGTCCATCCCTAGAT 23 0 17 0.12 2 0 2 0 0 0
.....................................................................................................................................................................CGTGCGACCTTATAGGCCGAAGC............................................................... 23 0 20 0.10 2 2 0 0 0 0
................................................................................................................................................................................ATAGGCCGAAGCCGAGCAGCCGTTCC................................................. 26 0 20 0.10 2 0 2 0 0 0
..................................................................................................................................................................................AGGCCGAAGCCGAGCAGCCGTT................................................... 22 0 20 0.10 2 0 1 1 0 0
...............................................................................................................................................................TGGTCGCGTGCGACCTTATAGGCC.................................................................... 24 0 20 0.10 2 2 0 0 0 0
..........................................................................................................................................................................................GCCGAGCAGCCGTTCCCCC.............................................. 19 0 20 0.10 2 0 2 0 0 0
.....................................................................................................................................................................................CCGAAGCCGAGCAGCCGTTCCC................................................ 22 0 20 0.10 2 2 0 0 0 0
.............................................................................................................GATTGAGGAAGTTACCAAATA......................................................................................................................... 21 3 10 0.10 1 0 0 0 0 1
...............................................................................................................................................................................TATAGGCCGAAGCCGAGCAGCCGTT................................................... 25 0 20 0.10 2 0 2 0 0 0
..............................................................................................................................................................TTGGTCGCGTGCGACCTTATAGGCCG................................................................... 26 0 20 0.10 2 2 0 0 0 0
..................................................................................................................................................................CCGCGTGCGACCTTATAGGCC.................................................................... 21 1 20 0.10 2 2 0 0 0 0
.....................................................................................................................................................................................................................................ACGGAGAGGTCCATCCCTAGAT 22 0 17 0.06 1 0 1 0 0 0
................................................................................................................................................................................................CAGCCGTTCCCCCCACAA......................................... 18 0 20 0.05 1 1 0 0 0 0
.........................................................................................................................................................................CGACCTTATAGGCCGAAGCCGAGCAGCC...................................................... 28 0 20 0.05 1 0 0 1 0 0
................................................................................................................................................................................ATAGGCCGAAGCCGAGCAGCCGTT................................................... 24 0 20 0.05 1 1 0 0 0 0
.....................................................................................................................................................................................CCGAAGCCGAGCAGCTGGT................................................... 19 2 20 0.05 1 1 0 0 0 0
..................................................................................................................................................................CCGCGTGCGACCTTATAGGCCGAA................................................................. 24 1 20 0.05 1 1 0 0 0 0
.....................................................................................................................................................................................CCGAAGCCGAGCAGCCGTCT.................................................. 20 2 20 0.05 1 1 0 0 0 0
.....................................................................................................................................................................................CCGAAGCCGAGCAGCCGTTCCCCC.............................................. 24 0 20 0.05 1 1 0 0 0 0
..................................................................................................................................................................TCGCGTGCGACCTTATAGGTG.................................................................... 21 2 20 0.05 1 1 0 0 0 0
................................................................................................................................................................GGTCGCGTGCGACCTTATAGGCTGAA................................................................. 26 1 20 0.05 1 1 0 0 0 0
...................................................................................................................................................................CGCGTGCGACCTTATAGGCCGAAGCCGA............................................................ 28 0 20 0.05 1 1 0 0 0 0
...................................................................................................................................................................CGCGTGCGACCTTATAGGCCGAACCC.............................................................. 26 1 20 0.05 1 1 0 0 0 0
..............................................................................................................................................................CTGGTCGCGTGCGACCTTATAGGCC.................................................................... 25 1 20 0.05 1 1 0 0 0 0
.........................................................................................................................................................................CGACCTTATAGGCCGAAGCCGAG........................................................... 23 0 20 0.05 1 1 0 0 0 0
..........................................................................................................................................................................................GCCGAGCAGCCGTTCCCCCCACAAT........................................ 25 0 20 0.05 1 1 0 0 0 0
...................................................................................................................................................................CACGTGCGACCTTATAGGCCGAAGCCGAG........................................................... 29 1 20 0.05 1 1 0 0 0 0
........................................................................................................................................................................GCGACCTTATAGGCCGAAGCCGAGCA......................................................... 26 0 20 0.05 1 1 0 0 0 0
.................................................................................................................................................................GTCGCGTGCGACCTTATAGGCCGAAGC............................................................... 27 0 20 0.05 1 0 1 0 0 0
...........................................................................................................................................................................................CCGAGCAGCCGTTCCCCCCACAA......................................... 23 0 20 0.05 1 1 0 0 0 0
................................................................................................................................................................................ATAGGCCGAAGCCGAGCAGCCGTTCCCTC.............................................. 29 1 20 0.05 1 1 0 0 0 0
............................................................................................................................................................................CCTTATAGGCCGAAGCCGAGCAG........................................................ 23 0 20 0.05 1 0 1 0 0 0
............................................................................................................................................................................................CGAGCAGCCGTTCCCCTCAC........................................... 20 1 20 0.05 1 1 0 0 0 0
.................................................................................................................................................................GTCGCGTGCGACCTTATAGGCCGAAGCC.............................................................. 28 0 20 0.05 1 0 1 0 0 0
...................................................................................................................................................................CGCGTGCGACATTATAGGCCGAA................................................................. 23 1 20 0.05 1 1 0 0 0 0
...................................................................................................................................................................................GCCCGAAGCCGAGCAGCCGTTCC................................................. 23 1 20 0.05 1 0 0 1 0 0
...................................................................................................................................................................................GGCCGAAGCCGAGCAGCCGTT................................................... 21 0 20 0.05 1 1 0 0 0 0
............................................................................................................................................................................CCTTATAGGCCGAAGCCGAGCAGCCGT.................................................... 27 0 20 0.05 1 0 1 0 0 0
..................................................................................................................................................................CCGCGTGCGACCTTATAGGCCCAA................................................................. 24 2 20 0.05 1 1 0 0 0 0
....................................................................................................................................................................................GCCGAAGCCGAGCAGCCGTTC.................................................. 21 0 20 0.05 1 0 1 0 0 0
.............................................................................................................................................................................CTTATAAGCCGAAGCCGAGCAGCCGTC................................................... 27 2 20 0.05 1 1 0 0 0 0
...................................................................................................................................................................................GGCCGAAGCCGAGCAGCCGTTCCC................................................ 24 0 20 0.05 1 0 1 0 0 0
.........................................................................................................................................................................CAACCTTATAGGCCGAAGCCGAGCAG........................................................ 26 1 20 0.05 1 0 0 1 0 0
...................................................................................................................................................................CACGTGCGACCTTATAGGCCGAAG................................................................ 24 1 20 0.05 1 1 0 0 0 0
.......................................................................................................................................................................................GAAGCCGAGCAGCCGTTCCCCCCACAAT........................................ 28 0 20 0.05 1 0 1 0 0 0
.........................................................................................................................................................................................AGCCGAGCAGCCGTTCCCCCCACAAT........................................ 26 0 20 0.05 1 0 1 0 0 0
..........................................................................................................................................................................................GCCGAGCAGCCGTTCCCCCCAC........................................... 22 0 20 0.05 1 0 1 0 0 0
...........................................................................................................................................................................................CCGAGCAGCCGTTCCCCCC............................................. 19 0 20 0.05 1 1 0 0 0 0
...................................................................................................................................................................CCCGTGCGACCTTATAGGCCGAA................................................................. 23 1 20 0.05 1 1 0 0 0 0
................................................................................................................................................................GGTCGCGTGCGACCTTATAGGCCGAA................................................................. 26 0 20 0.05 1 0 1 0 0 0
..................................................................................................................................................................................AGGCCGAAGCCGAGCAGCCGTTCCC................................................ 25 0 20 0.05 1 0 1 0 0 0
............................................................................................................................................................................................CGAGCAGCCGTTCCCCCCACAA......................................... 22 0 20 0.05 1 0 0 1 0 0
.....................................................................................................................................................................CGTGCGACCTTATAGGCCGAA................................................................. 21 0 20 0.05 1 0 0 1 0 0
.................................................................................................................................................................GTCGCGTGCGACCTTATAGGCCGAA................................................................. 25 0 20 0.05 1 0 1 0 0 0
..................................................................................................................................................................TCGCGTGCGACCTTATAGACCGAAG................................................................ 25 1 20 0.05 1 1 0 0 0 0
........................................................................................................................................................................CCCACCTTATAGGCCGAAGCCGA............................................................ 23 2 20 0.05 1 0 0 1 0 0
...............................................................................................................................................................................TATAGGCCGAAGCCGAGCAGCCGTGC.................................................. 26 1 20 0.05 1 1 0 0 0 0
...................................................................................................................................................................CGCGTGCGACCTTATAGGGC.................................................................... 20 1 20 0.05 1 1 0 0 0 0
............................................................................................................................................................................CCTTATAGGCCGAAGCCGAGCA......................................................... 22 0 20 0.05 1 1 0 0 0 0
.....................................................................................................................................................................................CCGAAGCCGAGCAGCCGTT................................................... 19 0 20 0.05 1 1 0 0 0 0
....................................................................................................................................................................GCGTGCGACCTTATAGGCCGAA................................................................. 22 0 20 0.05 1 0 0 0 1 0
............................................................................................................................................................................................CGAGCAGCCGTTCCCCCCAC........................................... 20 0 20 0.05 1 0 0 1 0 0
........................................................................................................................................................................................AAGCCGAGCAGCCGTTCCCCCCACAAT........................................ 27 0 20 0.05 1 0 1 0 0 0
.....................................................................................................................................................................CGTGCGACCTTATAGGCCGAAGCCGAG........................................................... 27 0 20 0.05 1 1 0 0 0 0
..................................................................................................................................................................TCGCGTGCGACCTTATAGGCCGAAC................................................................ 25 1 20 0.05 1 1 0 0 0 0
.........................................................................................................................................................................................................................CCAAGGGTTTTCACCGGGAG.............. 20 3 20 0.05 1 0 0 0 0 1
...........................................................................................................................................................................................CCGAGCAGCCGTTCCCCCCA............................................ 20 0 20 0.05 1 1 0 0 0 0
................................................................................................................................................................GGTCGCGTGCGACCTTATAGGCCCAA................................................................. 26 1 20 0.05 1 1 0 0 0 0
..............................................................................................................................................................TTGGTCGCGTGCGACCTTATAGGCC.................................................................... 25 0 20 0.05 1 1 0 0 0 0
.................................................................................................................................................................GTCGCGTGCGACCTTATAGGCTCAA................................................................. 25 2 20 0.05 1 1 0 0 0 0
.......................................................................................................................................................................................GAAGCCGAGCAGCCGTTCCC................................................ 20 0 20 0.05 1 0 1 0 0 0
.............................................................................................................................................................CTTGGTCGCGTGCGACCTTATAGGCCG................................................................... 27 0 20 0.05 1 1 0 0 0 0
..............................................................................................................................................................TTGGTCGCGTGCGACCTTATAGGCCGAAG................................................................ 29 0 20 0.05 1 1 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droAna3 scaffold_13335:3212813-3213063 + dan_2302 AAAATTCTC-----------------------------------ACACTCACCAGCGCAGTGGTAACATCCCAGAAAATG--------------------TAAATGTATGTCATGATTTTGTAATTTGAATTTTGTTTTTATATGCAAAAAATTGTAACGAATGCTAACTCCTA------CAATCATTTATG--GGCTGAGGCG-GATGGTAAAAACATGGG-AACCAGCGCACGCTGGA-----ATATCCGGCTTCGGCTCGTCGGCAAGGGGGGTGTTAA--TTGCCGGTTCCCAAGAGTGCCTCT-CCAGGTAGGGATCTA
droBip1 scf7180000396124:9171-9349 + TAAATCA--------------------------------------TATTTACTAAATGATTAT-----------------AATTGT--A--------------------------------------------------------------------ACGATTGCT-------ACGGTAGTAATCATTTATG--GGGAAGGGCT-GGTGTTAC-GAC-TGGG-AGCCAGCGCACGCTATG-----ACATCCGGCTTCGGCTCGTCGGCAAGGGGGGTGGTAT--TTGCCAGTTCCCAGCAGTGGCCTCCACATTTAAGGATCTT
droKik1 scf7180000302605:3506-3628 - ATT-----------------------------------------------------------------------------------GTAACGAACATTTTAAATCATATACT--------------------------------------------------------------------------------------CAGGCTAGCTGTTGG-GAC-TGAG-AG-AAGCGCACACGCAAAATTGTTCTCCGGCTGCGGCTCGTCGGCAAGGGGGGTGGTGGTCTTGCTGCTTCCC----------------------------
droFic1 scf7180000454086:303014-303085 + GAAAATATC-------------------------------------------------------------------------------------------AGAGTATGCGTAAAGCTTTAATAATAAGATTTTTGTTCACACATACAAAAAACTATTATAAAT-----------------------------------------------------------------------------------------------------------------------------------------------------------------
droEle1 scf7180000491265:56347-56388 - TAC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGCAAGCACTCTGGACCGCCTTT-TAAAATTTGGATGTA
droRho1 scf7180000780390:368-558 - ATTATTGTTTAAATAGGATATCGTTATAATATATCGAAAGAATT------------------------------------------GTA--------------------------------------------------------------------ACGAA------CCGCTA------CACTTATTAATACAAAT-CAGGCTGGATGTTGT-CTC--GAGATACCAGCGCACGCGAAAAAAT-ATATCCGGCTCTGGCTCTTCGGCTATGGGTGTGATGGTCTTGCTGTTACCTCGGAATGCCTTC-CCTAATAA-----TA
droSim2 3l:17872957-17872959 - AAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droSec2 scaffold_30:123056-123058 + AAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
dp5 Unknown_group_1:60070-60071 + AA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droPer2 scaffold_42:181428-181429 + AA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droWil2 scf2_1100000014622:46-85 + TAC-----------------------------------------------------------------------------------------------------------------------------------------------AAAAAAATGTAACAAATATAAATTCTTA------CATTAATTT---------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droAna3
AAAATTCTC-----------------------------------ACACTCACCAGCGCAGTGGTAACATCCCAGAAAATG--------------------TAAATGTATGTCATGATTTTGTAATTTGAATTTTGTTTTTATATGCAAAAAATTGTAACGAATGCTAACTCCTA------CAATCATTTATG--GGCTGAGGCG-GATGGTAAAAACATGGG-AACCAGCGCACGCTGGA-----ATATCCGGCTTCGGCTCGTCGGCAAGGGGGGTGTTAA--TTGCCGGTTCCCAAGAGTGCCTCT-CCAGGTAGGGATCTASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.........................................................................................................................................................................TCCTA------CAATCATTTATG--GGCTGAGGCG-G......................................................................................................................2839.67292531000
....................................................................................................................................................................................................................................................................TCGTCGGCAAGGGGGGTGTTAA--TTG.....................................2525.50111010000
.........................................................................................................................................................................TCCTA------CAATCATTTATG--GGCTGAGG..........................................................................................................................2544.00161032010
.........................................................................................................................................................................TCCTA------CAATCATTTATG--GGCTGAGGC.........................................................................................................................2643.25131300000
.........................................................................................................................................................................TCCTA------CAATCATTTATG--GGCTGAGGCG-.......................................................................................................................2743.25131210000
....................................................................................................................................................................................................................................................................TCGTCGGCAAGGGGGGTGTTAA--TTGC....................................2623.006312000
..................................................................................................................................................................................................................TAAAAACATGGG-AACCAGCGCACGCT.......................................................................................2642.5010460000
...........................................................................................................................................................TAACGAATGCTAACTCCTA------CAATCATT........................................................................................................................................2762.17131111000
..................................................................................................................................................................................................................TAAAAACATGGG-AACCAGCGCACGC........................................................................................2542.008260000
.........................................................................................................................................................................TCCTA------CAATCATTTATG--GGCTGA............................................................................................................................2341.757006001
......................................................................................................................................................................................................................................................TATCCGGCTTCGGCTCGTCGGCAAG.....................................................25201.703417170000
............................................................................................................................................................................TA------CAATCATTTATG--GGCTGAGGCG-G......................................................................................................................2551.608350000
......................................................................................................................................................................................................................................................TATCCGGCTTCGGCTCGTCGGCAAGG....................................................26201.40282440000
.........................................................................................................................................................................TCCTA------CAATCATTTATG--GGCTGAG...........................................................................................................................2441.255302000
.......................................................................................................................................................................................................................................................................TCGGCAAGGGGGGTGTTAA--TTGC....................................2321.002020000
....................................................................................................................................................................................CAATCATTTATG--GGCTGAGGCG-GATGG..................................................................................................................2711.001100000
....................................................................................................................................................................................................................................................................TCGTCGGCAAGGGGGGTGTTAA--T.......................................2321.002020000
..................................................................................................................................................................................................................TAAAAACATGGG-AACCAGCGCACG.........................................................................................2441.004200002
..................................................ACCAGCGCAGTGGTAACATCCCAGAAAAT.....................................................................................................................................................................................................................................................2911.001010000
..........................................................................................................................................................................CCTA------CAATCATTTATG--GGCTGAGGCG-G......................................................................................................................2731.003300000
.....................................................................................................................................................................TAACTCCTA------CAATCATTTATG--GGCT..............................................................................................................................2541.004040000
......................................................GCGCAGTGGTAACATCCCAGA.........................................................................................................................................................................................................................................................2111.001100000
.........................................................................................................................................................................TCCTA------CAATCATTTATG--GGCTGAGGCG-GA.....................................................................................................................2911.001010000
............................................................................................................................................................................................................................................TGGA-----ATATCCGGCTTCGGCTCGTCGGC........................................................27200.7515690000
..........................................................................................................................................................................CCTA------CAATCATTTATG--GGCTGAGGC.........................................................................................................................2540.753300000
.....................................................................................................................................................................TAACTCCTA------CAATCATTTATG--GGCTGA............................................................................................................................2740.753210000
....................................................................................................................................................................CTAACTCCTA------CAATCATTTATG--GGCT..............................................................................................................................2640.753030000
.........................................................................................................................................................................................................................................CGCTGGA-----ATATCCGGCTTCGGCTCGT............................................................26200.7014950000
.......................................................................................................................................................................................................................................CACGCTGGA-----ATATCCGGCTTCGGC................................................................24200.6012750000
..................................................................................................................................................................TGCTAACTCCTA------CAATCATTTATG--GGC...............................................................................................................................2750.603210000
............................................................................................................................................................................................................................................TGGA-----ATATCCGGCTTCGGCTCGTCGG.........................................................26200.60121020000
................................................................................................................................................................................................................................ACCAGCGCACGCTGGA-----ATATCCGGC......................................................................25200.55111100000
...................................................................................................................................................................................................................AAAAACATGGG-AACCAGCGCACGCT.......................................................................................2540.502200000
.....................................................................................................................................................................................................................................................................CGTCGGCAAGGGGGGTGTTAA--TTG.....................................2420.501100000
.......................................................................................................................................................................................................................................................................TCGGCAAGGGGGGTGTTAA--TTG.....................................2220.501010000
.........................................................................................................................................................................................................................................................................................A--TTGCCGGTTCCCAAGAGTGCC...................2220.501010000
....................................................................................................................................................................................................................................................................TCGTCGGCAAGGGGGGTGTTAA--TTT.....................................2520.501001000
....................................................................................................................................................................................................................................................................TCGTCGGCAAGGGGGGTGTTAA--........................................2240.502200000
....................................................................................................................................................................................................................................................................TCGTCGGCAAGGGGGGTGTTAA--TTGCCG..................................2820.501100000
..........................................................................................................................................................................................................................................................................GCAAGGGGGGTGTTAA--TTGCCGG.................................2320.501100000
...............................................................................................................................................................................................................TGGTAAAAACATGGG-AACCAGCGCACGC........................................................................................2840.502020000
...................................................................................................................................................................................................................AAAAACATGGG-AACCAGCGCACGC........................................................................................2440.502200000
............................................................................................................................................................................TA------CAATCATTTATG--GGCTGAGGC.........................................................................................................................2360.503030000
..........................................................................................................................................................................................................................................................................GCAAGGGGGGTGTTAA--TTGCCGGTTC..............................2620.501100000
........................................................................................................................................................................................................................................................................................AA--TTGCCGGTTCCCAAGAGTGCCTCT-C..............2720.501100000
....................................................................................................................................................................................................................................................................TCGTCGGCAAGGGGGGTGTTAA--TT......................................2420.501100000
.......................................................................................................................................................................................................................................................................................TAA--TTGCCGGTTCCCAAGAGTGCCT..................2520.501010000
..................................................................................................................................................................................................................TAAAAACATGGG-AACCAGCGCACGCTG......................................................................................2740.502200000
.......................................................................................................................................................................................................................................................................TCGGCAAGGGGGGTGTTAA--TTGCC...................................2420.501010000
............................................................................................................................................................................................................................................................................AAGGGGGGTGTTAA--TTGCCGGTTCCC............................2620.501010000
..........................................................................................................................................................................................................................................................................GCAAGGGGGGTGTTAA--TTGC....................................2020.501000010
......................................................................................................................................................................................................................................................................GTCGGCAAGGGGGGTGTTAA--TTGCCGG.................................2720.501001000
....................................................................................................................................................................................................................................................................................TGTTAA--TTGCCGGTTCCCAAGAGTGCC...................2720.501100000
...............................................................................................................................................................................................................TGGTAAAAACATGGG-AACCAGCGCACG.........................................................................................2740.502200000
....................................................................................................................................................................................................................................................................................TGTTAA--TTGCCGGTTCCCAAGAGTGC....................2620.501100000
...........................................................................................................................................................................................................................................................................CAAGGGGGGTGTTAA--TTGC....................................1920.501010000
........................................................................................................................................................................................................................................................TCCGGCTTCGGCTCGTCGGCAAGG....................................................24200.459900000
....................................................................................................................................................................CTAACTCCTA------CAATCATTTATG--GGC...............................................................................................................................2570.433030000
...............................................................................................................................................................................................................TGGTAAAAACATGGG-AACCAGCGCAC..........................................................................................2650.402110000
...............................................................................................................................................................................................................TGGTAAAAACATGGG-AACCAGCGCA...........................................................................................2550.402101000
......................................................................................................................................................................................................................AACATGGG-AACCAGCGCACGCT.......................................................................................2250.402110000
........................................................................................................................................................................................................................................................TCCGGCTTCGGCTCGTCGGCAAGGG...................................................25200.357520000
..................................................................................................................................................................TGCTAACTCCTA------CAATCATTTATG--G.................................................................................................................................2560.332110000
...............................................................................................................................................................GAATGCTAACTCCTA------CAATCATT........................................................................................................................................2360.332020000
....................................................................................................................................................................................................................................................................TCGTCGGCAAGGGGGGTGTTAA--TTGT....................................2630.331010000
..............................................................................................................................................................................................................................................GA-----ATATCCGGCTTCGGCTCGTCGGC........................................................25200.306240000
.........................................................................................................................................................................TCCTA------CAATCATTTATG--GGC...............................................................................................................................2070.292011000
.........................................................................................................................................................................................................................................CGCTGGA-----ATATCCGGCTTCGGCTC..............................................................24200.255140000
..........................................................................................................................................................................CCTA------CAATCATTTATG--GGCTGAGG..........................................................................................................................2440.251100000
........................................................................................................................................................................................................................................................TCCGGCTTCGGCTCGTCGGCAAGGGG..................................................26200.255500000
.........................................................................................................................................................................................................................................CGCTGGA-----ATATCCGGCTTCGGC................................................................22200.255212000
.................................................................................................................................................................................................................GTAAAAACATGGG-AACCAGCGCACGCT.......................................................................................2740.251100000
......................................................................................................................................................................AACTCCTA------CAATCATTTATG--GGCTGAG...........................................................................................................................2740.251100000
.................................................................................................................................................................................................................GTAAAAACATGGG-AACCAGCGCACGC........................................................................................2640.251010000
.........................................................................................................................................................................TCCTA------CAATCATTTATG--GGCTTG............................................................................................................................2340.251001000
.....................................................................................................................................................................TAACTCCTA------CAATCATTTATG--GGCTGAGG..........................................................................................................................2940.251100000
..........................................................................................................................................................................CCTA------CAATCATTTATG--GGCTGAGGCG-.......................................................................................................................2640.251100000
..................................................................................................................................................................................................................TAAAAACATGGG-AACCAGCGCACGCC.......................................................................................2640.251010000
.........................................................................................................................................................................................................................................CGCTGGA-----ATATCCGGCTTCGGCTCGTC...........................................................27200.255410000
.........................................................................................................................................................................TCCTA------CAATCATTTATG--GGCTGAGGCG-T......................................................................................................................2840.251010000
.....................................................................................................................................................................TAACTCCTA------CAATCATTTATG--GGCTGAG...........................................................................................................................2840.251010000
..................................................................................................................................................................TGCTAACTCCTA------CAATCATTTATG--GG................................................................................................................................2650.201100000
..........................................................................................................................................................................................................................................GCTGGA-----ATATCCGGCTTCGGCTCGT............................................................25200.204130000
..................................................................................................................................................................................................................TAAAAACATGGG-AACCAGCGCAC..........................................................................................2350.201010000
......................................................................................................................................................................................................................................................TATCCGGCTTCGGCTCGTCGGCAAGGG...................................................27200.204310000
......................................................................................................................................................................................................................AACATGGG-AACCAGCGCACGC........................................................................................2150.201010000
..........................................................................................................................................................................................................................................GCTGGA-----ATATCCGGCTTCGGCTCGTC...........................................................26200.204220000
...............................................................................................................................................................................................................TGGTAAAAACATGGG-AACCAGCGCACT.........................................................................................2750.201100000
..............................................................................................................................................................................................................................................................TTCGGCTCGTCGGCAAGGGGGGTG..............................................24200.204400000
......................................................................................................................................................................................................................................................TATCCGGCTTCGGCTCGTCGGCA.......................................................23200.204400000
....................................................................................................................................................................................CAATCATTTATG--GGCTGAGGC.........................................................................................................................2160.171010000
...............................................................................................................................................................GAATGCTAACTCCTA------CAATCATTTAT.....................................................................................................................................2660.171100000
..................................................................................................................................................................TGCTAACTCCTA------CAATCATTTATG--GT................................................................................................................................2660.171010000
............................................................................................................................................................................TA------CAATCATTTATG--GGCTGAGGCG-.......................................................................................................................2460.171100000
...........................................................................................................................................................TAACGAATGCTAACTCCTA------CAATCATTTA......................................................................................................................................2960.171010000
...........................................................................................................................................................TAACGAATGCTAACTCCTA------CAATC...........................................................................................................................................2460.171010000
...................................................................................................................................................................GCTAACTCCTA------CAATCATTTATG--GG................................................................................................................................2560.171100000
................................................................................................................................................................AATGCTAACTCCTA------CAATCATTTATG--..................................................................................................................................2660.171010000
............................................................................................................................................................AACGAATGCTAACTCCTA------CAATCATT........................................................................................................................................2660.171100000
............................................................................................................................................................................................................................................TGGA-----ATATCCGGCTTCGGCTCGTC...........................................................24200.153102000
.......................................................................................................................................................................................................................................................ATCCGGCTTCGGCTCGTCGGCAAGGG...................................................26200.153210000
............................................................................................................................................................................................................................................TGGA-----ATATCCGGCTTCGGCTCGTCG..........................................................25200.153120000
......................................................................................................................................................................................................................................................TATCCGGCTTCGGCTCGTCGGC........................................................22200.153120000
.............................................................................................................................................................................................................................G-AACCAGCGCACGCTGGA-----ATATCCGGC......................................................................27200.153030000
...............................................................................................................................................................................................................................................................TCGGCTCGTCGGCAAGGGG..................................................19200.153300000
...........................................................................................................................................................................................................................................CTGGA-----ATATCCGGCTTCGGCTCGTC...........................................................25200.153120000
.....................................................................................................................................................................TAACTCCTA------CAATCATTTATG--GGC...............................................................................................................................2470.141001000
...................................................................................................................................................................GCTAACTCCTA------CAATCATTTATG--G.................................................................................................................................2470.141100000
.....................................................................................................................................................................TAACTCCTA------CAATCATTTATG--GGCC..............................................................................................................................2570.141010000
......................................................................................................................................................................................................................................................TATCCGGCTTCGGCTCGTCGG.........................................................21200.102011000
..............................................................................................................................................................................................................................................GA-----ATATCCGGCTTCGGCTCGTCGG.........................................................24200.102200000
.............................................................................................................................................................................................................................................GGA-----ATATCCGGCTTCGGCTCGTCGGC........................................................26200.102020000
..............................................................................................................................................................................................................................................GA-----ATATCCGGCTTCGGCTCGTCGGCAAG.....................................................28200.102200000
......................................................................................................................................................................................................................................................TATCCGGCTTCGGCTCGTCGGCAA......................................................24200.102200000
.........................................................................................................................................................................................................................................CGCTGGA-----ATATCCGGCTTCGGCT...............................................................23200.102020000
.......................................................................................................................................................................................................................................CACGCTGGA-----ATATCCGGCTTCGGCTC..............................................................26200.102020000
........................................................................................................................................................................................................................................ACGCTGGA-----ATATCCGGCTTCGGCTC..............................................................25200.102020000
..........................................................................................................................................................................................................................................GCTGGA-----ATATCCGGCTTCGGCTCGC............................................................25200.102020000
............................................................................................................................................................................................................................................TGGA-----ATATCCGGCTTCGGCTCGT............................................................23200.102110000
.........................................................................................................................................................................................................................................CGCTGGA-----ATATCCGGCTTCGGCTCG.............................................................25200.102110000
......................................................................................................................................................................................................................................................TATCCGGCTTCGGCTCGTCGGCAAGGGG..................................................28200.102200000
........................................................................................................................................................................................................................................................TCCGGCTTCGGCTCGTCGGCAAG.....................................................23200.102020000
........................................................................................................................................................................................................................................................TCCGGCTTCGGCTCGTCGGCAAGGGGG.................................................27200.102200000
......................................................................................................................................................................................................................................................TATCCGGCTTCGGCTCGTCGGCAAA.....................................................25200.102110000
..............................................................................................................................................................................................................................................................TTCGGCTCGTCGGCAAGGGGGGTGT.............................................25200.051100000
......................................................................................................................................................................................................................................................TATCCGGCTTCGGCTCGTCGGCAAAA....................................................26200.051100000
...........................................................................................................................................................................................................................................CTGGA-----ATATCCGGCTTCGGCTCGTCGGC........................................................28200.051010000
............................................................................................................................................................................................................................................TGGA-----ATATCCGGCTTCGGCTCGC............................................................23200.051010000
..............................................................................................................................................................................................................................................................TTCGGCTCGTCGGCAAGGGG..................................................20200.051100000
..............................................................................................................................................................................................................................................................TTCGGCTCGTCGGCAAGGGGC.................................................21200.051010000
...............................................................................................................................................................................................................................AACCAGCGCACGCTGGA-----ATATCCGGCTTC...................................................................29200.051010000
................................................................................................................................................................................................................................ACCAGCGCACGCTGGA-----ATATCCGGCC.....................................................................26200.051010000
...............................................................................................................................................................................................................................................................TCGGCTCGTCGGCAAGGGGGGTG..............................................23200.051010000
.........................................................................................................................................................................................................................................................CCGGCTTCGGCTCGTCGGCAAG.....................................................22200.051100000
......................................................................................................................................................................................................................................................TATCCGGCTTCGGCTCGTCG..........................................................20200.051100000
......................................................................................................................................................................................................................................GCACGCTGGA-----ATATCCGGCTTCGGC................................................................25200.051100000
................................................................................................................................................................................................................................ACCAGCGCACGCTGGA-----ATATCCGGCTTCG..................................................................29200.051010000
.....................................................................................................................................................................................................................................................ATATCCGGCTTCGGCTCGTC...........................................................20200.051010000
.........................................................................................................................................................................................................................................CGCTGGA-----ATATCCGGCTTCGGCTCGTCG..........................................................28200.051100000
......................................................................................................................................................................................................................................................TATCCGGCTTCGGCTCGTCGGCAAGA....................................................26200.051100000
..............................................................................................................................................................................................................................................GA-----ATATCCGGCTTCGGCTCGTCG..........................................................23200.051100000
...............................................................................................................................................................................................................................................................TCGGCTCGTCGGCAAGGGGGGT...............................................22200.051010000
.........................................................................................................................................................................................................................................CGCTGGA-----ATATCCGGCTTCGGCTCC.............................................................25200.051010000
...............................................................................................................................................................................................................................AACCAGCGCACGCTGGA-----ATATCCGGC......................................................................26200.051010000
...........................................................................................................................................................................................................................................CTGGA-----ATATCCGGCTTCGGC................................................................20200.051010000
.............................................................................................................................................................................................................................................................CTTCGGCTCGTCGGCAAGGGG..................................................21200.051100000
.......................................................................................................................................................................................................................................................ATCCGGCTTCGGCTCGTCGGCAAG.....................................................24200.051100000
.............................................................................................................................................................................................................................................GGA-----ATATCCGGCTTCGGCTCGTCGA.........................................................25200.051100000
.................................................................................................................................................................................................................................CCAGCGCACGCTGGA-----ATATCCGGCT.....................................................................25200.051010000
................................................................................................................................................................................................................................ACCAGCGCACGCTGGA-----ATATCCGG.......................................................................24200.051100000
...............................................................................................................................................................................................................................AACCAGCGCACGCTGGA-----ATATCCGGCT.....................................................................27200.051100000
.............................................................................................................................................................................................................................................GGA-----ATATCCGGCTTCGGCTCG.............................................................21200.051010000
.................................................................................................................................................................................................................................CCAGCGCACGCTGGA-----ATATCCGGCTTC...................................................................27200.051010000
.....................................................................................................................................................................................................................................CGCACGCTGGA-----ATATCCGGCTTCGGC................................................................26200.051100000
...............................................................................................................................................................................................................................................................TCGGCTCGTCGGCAAGGGGG.................................................20200.051100000
...............................................................................................................................................................................................................................................A-----ATATCCGGCTTCGGCTCGTC...........................................................21200.051100000
................................................................................................................................................................................................................................ACCAGCGCACGCTGGA-----ATATCCGGCTTC...................................................................28200.051010000
......................................................................................................................................................................................................................................................TATCCGGCTTCGGCTCGTCGGCAAGGC...................................................27200.051010000
..........................................................................................................................................................................................................................................GCTGGA-----ATATCCGGCTTCGGCTCG.............................................................24200.051100000
.........................................................................................................................................................................................................................................CGCTGGA-----ATATCCGGCTTCGGCC...............................................................23200.051010000
...........................................................................................................................................................................................................................................................GGCTTCGGCTCGTCGGCAAGGG...................................................22200.051010000
..........................................................................................................................................................................................................................................GCTGGA-----ATATCCGGCTTCGGCTC..............................................................23200.051010000
...............................................................................................................................................................................................................................................................TCGGCTCGTCGGCAAGGGGGG................................................21200.051010000
..............................................................................................................................................................................................................................................................TTCGGCTCGTCGGCAAGGG...................................................19200.051001000
..............................................................................................................................................................................................................................................................TTCGGCTCGTCGGCAAGGGGGG................................................22200.051010000
.......................................................................................................................................................................................................................................CACGCTGGA-----ATATCCGGCTTCGG.................................................................23200.051100000
......................................................................................................................................................................................................................................................TATCCGGCTTCGGCTCGTCGGCATT.....................................................25200.051010000
........................................................................................................................................................................................................................................................TCCGGCTTCGGCTCGTCGGCAAGGGGGG................................................28200.051010000
....................................................................................................................................................................................................................................GCGCACGCTGGA-----ATATCCGGCTTCG..................................................................25200.051000001
..............................................................................................................................................................................................................................................................TTCGGCTCGTCGGCAAGGGGG.................................................21200.051000100
........................................................................................................................................................................................................................................................TCCGGCTTCGGCTCGTCGGCAAGGGA..................................................26200.051100000
.......................................................................................................................................................................................................................................CACGCTGGA-----ATATCCGGCTTCGGCTCG.............................................................27200.051100000
......................................................................................................................................................................................................................................................TATCCGGCTTCGGCTCGTCGGCAAT.....................................................25200.051010000
.......................................................................................................................................................................................................................................CACGCTGGA-----ATATCCGGCTTCGGCTCGTC...........................................................29200.051100000
...............................................................................................................................................................................................................................AACCAGCGCACGCTGGA-----ATATCCGG.......................................................................25200.051100000
...........................................................................................................................................................................................................................................CTGGA-----ATATCCGGCTTCGGCTCG.............................................................23200.051100000
..............................................................................................................................................................................................................................................GA-----ATATCCGGCTTCGGCTCGTCGGCA.......................................................26200.051100000
...........................................................................................................................................................................................................................................CTGGA-----ATATCCGGCTTCGGCTCGTCG..........................................................26200.051100000
.........................................................................................................................................................................................................................................................CCGGCTTCGGCTCGTCGGCAAGGG...................................................24200.051100000
droBip1
TAAATCA--------------------------------------TATTTACTAAATGATTAT-----------------AATTGT--A--------------------------------------------------------------------ACGATTGCT-------ACGGTAGTAATCATTTATG--GGGAAGGGCT-GGTGTTAC-GAC-TGGG-AGCCAGCGCACGCTATG-----ACATCCGGCTTCGGCTCGTCGGCAAGGGGGGTGGTAT--TTGCCAGTTCCCAGCAGTGGCCTCCACATTTAAGGATCTTSizeHit CountTotal NormTotal
No Reads
droKik1
ATT-----------------------------------------------------------------------------------GTAACGAACATTTTAAATCATATACT--------------------------------------------------------------------------------------CAGGCTAGCTGTTGG-GAC-TGAG-AG-AAGCGCACACGCAAAATTGTTCTCCGGCTGCGGCTCGTCGGCAAGGGGGGTGGTGGTCTTGCTGCTTCCC----------------------------SizeHit CountTotal NormTotal
No Reads
droFic1
GAAAATATC-------------------------------------------------------------------------------------------AGAGTATGCGTAAAGCTTTAATAATAAGATTTTTGTTCACACATACAAAAAACTATTATAAAT-----------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
TAC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGCAAGCACTCTGGACCGCCTTT-TAAAATTTGGATGTASizeHit CountTotal NormTotal
No Reads
droRho1
ATTATTGTTTAAATAGGATATCGTTATAATATATCGAAAGAATT------------------------------------------GTA--------------------------------------------------------------------ACGAA------CCGCTA------CACTTATTAATACAAAT-CAGGCTGGATGTTGT-CTC--GAGATACCAGCGCACGCGAAAAAAT-ATATCCGGCTCTGGCTCTTCGGCTATGGGTGTGATGGTCTTGCTGTTACCTCGGAATGCCTTC-CCTAATAA-----TASizeHit CountTotal NormTotal
No Reads
droSim2
AAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
No Reads
droSec2
AAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
No Reads
dp5
AA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
No Reads
droPer2
AA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
No Reads
droWil2
TAC-----------------------------------------------------------------------------------------------------------------------------------------------AAAAAAATGTAACAAATATAAATTCTTA------CATTAATTT---------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
No Reads

Generated: 05/18/2015 at 04:21 AM