ID:

dan_2285

 Coordinate:

scaffold_13335:2334409-2334679 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-47.8 -47.8 -47.7

Flybase annnotation

CDS [Dana\GF19554-cds]; CDS [Dana\GF19554-cds]; exon [dana_GLEANR_21597:3]; exon [dana_GLEANR_21597:2]; intron [Dana\GF19554-in]

Repeatable elements

NameClassFamilyStrand
AT_richLow_complexityLow_complexity+

Sense Strand Reads

##################################################-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
GACTGCGTCATCTGCCCAAGGACATAGTGGCCTTGAAGAATCTAACGGAGGTAGGGAATTATATTTTGTTTATTTAACTCTTATATTTAAAACTCTTATACTACGTATCGTAACTGTTCTGTCATTACGTATACGTAATTTGTTTCCCACATTACGTATACGTAATATGTACCATTCCGCAAAATGCACTGCCTACGTTGCGTATACGCAATATTTGAATTTTTATTGAAATAAATATAAAAAAAGAAAACAAAATATTTATTAAAAATATAAATACAATTTTATAGAATCTGTTTCATACTAACCTTTTCTTTTTTCCAGCTAAGTCTCCGCGACAATCCTTTGGTGGTCCGCTTCGTCCAGGACATGGC
**************************************************....((((..(((((((((((.(((.....(((((((((..............(((((((((((.((......((((((((((((((((.((.....)).))))))))))))))))............(((........)))..)))))))).)))))(((((..........)))))...)))))))))...))).)))))))))))..........((((((......))))))(((...(((.......)))...)))....))))..************************************************** 		Read size # Mismatch Hit Count Total Norm Total M058
embryo
 M044
female body
 V106
head
 V039
embryo
 V105
male body		 V055
head
..........................GTGGCCTTGAAGAATCTAAC..................................................................................................................................................................................................................................................................................................................................... 20 0 1 35.00 35 14 7 10 3 1 0
..........................GTGGCCTTGAAGAATCTAACGG................................................................................................................................................................................................................................................................................................................................... 22 0 1 10.00 10 2 7 1 0 0 0
..........................GTGGCCTTGAAGAATCTAACG.................................................................................................................................................................................................................................................................................................................................... 21 0 1 8.00 8 3 3 0 2 0 0
..........................GGGGCCTTGAAGAATCTAAC..................................................................................................................................................................................................................................................................................................................................... 20 1 1 8.00 8 8 0 0 0 0 0
.......................ATAGTGGCCTTGAAGAATCTAAC..................................................................................................................................................................................................................................................................................................................................... 23 0 1 7.00 7 2 4 1 0 0 0
.........................AGTGGCCTTGAAGAATCTAAC..................................................................................................................................................................................................................................................................................................................................... 21 0 1 7.00 7 5 0 0 2 0 0
......................CATAGTGGCCTTGAAGAATCTAACGG................................................................................................................................................................................................................................................................................................................................... 26 0 1 4.00 4 0 3 1 0 0 0
GACTGCGTCATCTGCCCAAGGACATA......................................................................................................................................................................................................................................................................................................................................................... 26 0 1 3.00 3 0 2 0 0 0 1
..........................GTGGCCTTGAAGAATCTAACGGA.................................................................................................................................................................................................................................................................................................................................. 23 0 1 3.00 3 0 3 0 0 0 0
...........................TGGCCTTGAAGAATCTAACGG................................................................................................................................................................................................................................................................................................................................... 21 0 1 2.00 2 0 2 0 0 0 0
............................GGCCTTGAAGAATCTAACG.................................................................................................................................................................................................................................................................................................................................... 19 0 1 2.00 2 1 0 0 0 1 0
..........................GGGTCCTTGAAGAATCTAAC..................................................................................................................................................................................................................................................................................................................................... 20 2 1 2.00 2 2 0 0 0 0 0
.......................ATAGTGGCCTTGAAGAATCTAACG.................................................................................................................................................................................................................................................................................................................................... 24 0 1 2.00 2 0 0 0 0 2 0
.....................ACATAGTGGCCTTGAAGAATCTAAC..................................................................................................................................................................................................................................................................................................................................... 25 0 1 2.00 2 1 1 0 0 0 0
GACTGCGTCATCTGCCCAAG............................................................................................................................................................................................................................................................................................................................................................... 20 0 1 2.00 2 1 1 0 0 0 0
....................GACATAGTGGCCTTGAAGAATCTAAC..................................................................................................................................................................................................................................................................................................................................... 26 0 1 2.00 2 2 0 0 0 0 0
..........................GGCGCCTTGAAGAATCTAAC..................................................................................................................................................................................................................................................................................................................................... 20 2 1 1.00 1 1 0 0 0 0 0
..........................GTGGCCCTGAAGAATCTAAC..................................................................................................................................................................................................................................................................................................................................... 20 1 1 1.00 1 0 1 0 0 0 0
.........ATCTGCCCAAGGACATAGTGGC.................................................................................................................................................................................................................................................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0 0
.....................................................................................................................................................................................................................................................................................................TGTCATACTAACCTTTTCTTTTTTCCAC.................................................. 28 2 1 1.00 1 1 0 0 0 0 0
........CATCTGCCCAAGGACATA......................................................................................................................................................................................................................................................................................................................................................... 18 0 1 1.00 1 0 1 0 0 0 0
.................................................................................................................................................................................................................................................................................................................................CTAAGTCTCCGCGACAATCCTTTGGTG....................... 27 0 1 1.00 1 0 1 0 0 0 0
...TGCGTCATCTGCCCAAGGG............................................................................................................................................................................................................................................................................................................................................................. 19 1 1 1.00 1 0 1 0 0 0 0
................................................................................................................................................................................................................................................................................................................................................AATCCTTTGGTGGTCCGCTTCGT............ 23 0 1 1.00 1 0 0 0 1 0 0
...................................................................................................................................................................................................................................................................................................................................................CCTTTGGTGGTCCGCTTCGTCC.......... 22 0 1 1.00 1 1 0 0 0 0 0
............................GGCCTTGAAGAATCTAACGGAG................................................................................................................................................................................................................................................................................................................................. 22 0 1 1.00 1 1 0 0 0 0 0
...................GGACATAGTGGCCTTGAAGAATCTAACG.................................................................................................................................................................................................................................................................................................................................... 28 0 1 1.00 1 0 1 0 0 0 0
GACTGCGTCATCTGCCCAAGGTCTG.......................................................................................................................................................................................................................................................................................................................................................... 25 3 1 1.00 1 0 0 0 0 0 1
.........................AGAGGCCTTGAAGAATCTAAC..................................................................................................................................................................................................................................................................................................................................... 21 1 1 1.00 1 0 1 0 0 0 0
.........................AGCGGCCTTGAAGAATCTAAC..................................................................................................................................................................................................................................................................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0
.........................AGTGGCCTTGAAGAATCTAACGGA.................................................................................................................................................................................................................................................................................................................................. 24 0 1 1.00 1 0 1 0 0 0 0
........CATCTGCCCAAGGACATAGTGGCC................................................................................................................................................................................................................................................................................................................................................... 24 0 1 1.00 1 1 0 0 0 0 0
..........................GTGGCCTTGAAGAATCTAA...................................................................................................................................................................................................................................................................................................................................... 19 0 1 1.00 1 0 0 0 1 0 0
....................................................................................................................................................................................................................................................................................................................................................CTTTGGTGGTCCGCTTCGTCC.......... 21 0 1 1.00 1 0 1 0 0 0 0
......................................................................................................................................................................................................................................................................................................................................TCTCCGCGACAATCCTTTGGTGGTCCGC................. 28 0 1 1.00 1 0 0 0 1 0 0
...................GGACATAGTGGCCTTGAAGAA........................................................................................................................................................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0
.......................AGAGTGGCCTTGAAGAATCTAAC..................................................................................................................................................................................................................................................................................................................................... 23 1 1 1.00 1 1 0 0 0 0 0
...............................................................................................................................................................................................................................................................................................................................................CAATCCTTTGGTGGTCCGCTTT.............. 22 1 1 1.00 1 0 1 0 0 0 0
....................GGCATAGTGGCCTTGAAGAATCTAAC..................................................................................................................................................................................................................................................................................................................................... 26 1 1 1.00 1 1 0 0 0 0 0
...TGCGTCATCTGCCCAAGGA............................................................................................................................................................................................................................................................................................................................................................. 19 0 1 1.00 1 1 0 0 0 0 0
....................................................................................................................................................................................................................................................................................................................................................CTTTGGTGGTCCGCTTCGTCCAGGA...... 25 0 1 1.00 1 1 0 0 0 0 0
..CTGCGTCATCTGCCCAAGG.............................................................................................................................................................................................................................................................................................................................................................. 19 0 1 1.00 1 0 1 0 0 0 0
....................................................................................................................................................................................................................................................................................................................................................CTTTGGTGGTCCGCTTCGTC........... 20 0 1 1.00 1 0 0 0 1 0 0
.......................ATAGTGGCCTTGAAGAATCTAACGGA.................................................................................................................................................................................................................................................................................................................................. 26 0 1 1.00 1 0 1 0 0 0 0
.................................................................................................................................................................................................................................................................................................................................................ATCCTTTGGTGGTCCGCTTC.............. 20 0 1 1.00 1 0 1 0 0 0 0
..CGGTGTCATCTGCCCAAGGAC............................................................................................................................................................................................................................................................................................................................................................ 21 2 1 1.00 1 1 0 0 0 0 0
..........................GTCGCCTTGAAGAATCTAAC..................................................................................................................................................................................................................................................................................................................................... 20 1 1 1.00 1 1 0 0 0 0 0
.....................................................................................................................................................................................................................................................................................................................................................TTTGGTGGTCCGCTTCGT............ 18 0 1 1.00 1 0 0 1 0 0 0
...........CTGCCCAAGGACATAGTGGCCT.................................................................................................................................................................................................................................................................................................................................................. 22 0 1 1.00 1 1 0 0 0 0 0
.......................................................................................................................................................................................................................................................................................................................................CTCCGCGACAATCCTTTGGTG....................... 21 0 1 1.00 1 0 0 0 0 1 0
...............................................................................................................................................................................................................................................................................................................................................CAATCCTTTGGTGGTCCGCTTC.............. 22 0 1 1.00 1 1 0 0 0 0 0
..................................................................................................................................................................................GCAAAATGCACTGCCTACGTTGCGTA....................................................................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0
..........................GTGGCCTTGAAGGATCTAAC..................................................................................................................................................................................................................................................................................................................................... 20 1 1 1.00 1 0 0 1 0 0 0
..........................GTGGCCTTGAAGAATCTAACGT................................................................................................................................................................................................................................................................................................................................... 22 1 1 1.00 1 0 1 0 0 0 0
GACTGCGTCATCTGCCCAAGGAC............................................................................................................................................................................................................................................................................................................................................................ 23 0 1 1.00 1 1 0 0 0 0 0
...............................................................................................................................................................................................................................................................................................................................................CAATCCTTTGGTGGTCCGCT................ 20 0 1 1.00 1 0 1 0 0 0 0
................................................................................................................................................................................................................................................................................................................................................AATCCTTTGGTGGTCCGCTTC.............. 21 0 1 1.00 1 0 1 0 0 0 0
.........ATCTGCCCAAGGACATAGTGGCCTT................................................................................................................................................................................................................................................................................................................................................. 25 0 1 1.00 1 1 0 0 0 0 0
...................................................................................................................................................................................................................................................................................................................................AAGTCTCCGCGACAATCCTTT........................... 21 0 1 1.00 1 1 0 0 0 0 0
..........................GTGGCCTTGAAGAATCTAGCGG................................................................................................................................................................................................................................................................................................................................... 22 1 1 1.00 1 0 1 0 0 0 0
.........................ATTGGCCTTGAAGAATCTAAC..................................................................................................................................................................................................................................................................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0
........................TAGTGGCCTTGAAGAATCTAACG.................................................................................................................................................................................................................................................................................................................................... 23 0 1 1.00 1 0 0 0 0 1 0
..........................GGGGCCTTGAAGAATCTAACG.................................................................................................................................................................................................................................................................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0
.......................ATAGTGGCCTTGAAGAATCTAACGG................................................................................................................................................................................................................................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0 0
........................TAGTGGCCTTGAAGAATCTAACGG................................................................................................................................................................................................................................................................................................................................... 24 0 1 1.00 1 0 1 0 0 0 0
.ACTGCGTCATCTGCCCAAG............................................................................................................................................................................................................................................................................................................................................................... 19 0 1 1.00 1 0 1 0 0 0 0
............................GGCCTTGAAGAATCTAAC..................................................................................................................................................................................................................................................................................................................................... 18 0 1 1.00 1 1 0 0 0 0 0
......................CATTGTGGCCTTGAAGAATCTAAC..................................................................................................................................................................................................................................................................................................................................... 24 1 1 1.00 1 1 0 0 0 0 0
.....CGTCATCTGCCCAAGGACA........................................................................................................................................................................................................................................................................................................................................................... 19 0 1 1.00 1 0 1 0 0 0 0
.......................................................................................................................................................................................................................................................................................................................................CTCCGCGACAATCCTTTGGTGGT..................... 23 0 1 1.00 1 1 0 0 0 0 0
.................................................................................................................................................................................................................................................................................................................................CGAAGTCTCCGCGACAATCCT............................. 21 1 1 1.00 1 1 0 0 0 0 0
..........................TGGGCCTTGAAGAATCTAAC..................................................................................................................................................................................................................................................................................................................................... 20 2 2 0.50 1 1 0 0 0 0 0
...............................................................................................................................................................................................................................................AAAAGTGAAAACAAACTATTTAT............................................................................................................. 23 3 13 0.08 1 0 0 0 1 0 0
..................................................................................................CACTACGTATGGTTACTGT.............................................................................................................................................................................................................................................................. 19 3 13 0.08 1 0 0 0 0 0 1
............................................................................................TTCTTATACTACATATCGTT................................................................................................................................................................................................................................................................... 20 3 17 0.06 1 0 0 0 1 0 0
.............................................................................................................GTAACTGTTCAGGTATTAC................................................................................................................................................................................................................................................... 19 3 20 0.05 1 0 1 0 0 0 0
............................................................................................TGCTTGTACTACGTATCGT.................................................................................................................................................................................................................................................................... 19 3 20 0.05 1 0 0 0 0 0 1
................................................................................................................................................................................................................................................................................................................CCTTATCTTTTTGCCAGC................................................. 18 2 20 0.05 1 0 1 0 0 0 0

Anti-sense strand reads

CTGACGCAGTAGACGGGTTCCTGTATCACCGGAACTTCTTAGATTGCCTCCATCCCTTAATATAAAACAAATAAATTGAGAATATAAATTTTGAGAATATGATGCATAGCATTGACAAGACAGTAATGCATATGCATTAAACAAAGGGTGTAATGCATATGCATTATACATGGTAAGGCGTTTTACGTGACGGATGCAACGCATATGCGTTATAAACTTAAAAATAACTTTATTTATATTTTTTTCTTTTGTTTTATAAATAATTTTTATATTTATGTTAAAATATCTTAGACAAAGTATGATTGGAAAAGAAAAAAGGTCGATTCAGAGGCGCTGTTAGGAAACCACCAGGCGAAGCAGGTCCTGTACCG
**************************************************....((((..(((((((((((.(((.....(((((((((..............(((((((((((.((......((((((((((((((((.((.....)).))))))))))))))))............(((........)))..)))))))).)))))(((((..........)))))...)))))))))...))).)))))))))))..........((((((......))))))(((...(((.......)))...)))....))))..************************************************** 		Read size # Mismatch Hit Count Total Norm Total M044
female body
 V039
embryo
 M058
embryo
 V055
head
.........TAGACGGGTTCCTGTATCACC..................................................................................................................................................................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0
...................................................................................................................................................................................................................................................................................................................................................GGAAACCACCAGGCGAAGC............. 19 0 1 1.00 1 1 0 0 0
......................................TTACATTGCCTGCATCCCAT......................................................................................................................................................................................................................................................................................................................... 20 3 6 0.17 1 0 1 0 0
.....................................................................................................................................................................................................................................................................................................................................................ACACCACCAGGCGAAGAA............ 18 2 8 0.13 1 0 0 1 0
................................................................................................................................................................................................................................................................................................................GGAGAAGAAAAAAGGTCA................................................. 18 2 20 0.05 1 0 0 0 1
..................TCCTGTATCCCCGGTACTC.............................................................................................................................................................................................................................................................................................................................................. 19 3 20 0.05 1 0 0 0 1
.................................................CCATCACTTAATACAAAA................................................................................................................................................................................................................................................................................................................ 18 2 20 0.05 1 0 0 1 0
......................................................................................................TGGATCCCATTGACAAGAC.......................................................................................................................................................................................................................................................... 19 3 20 0.05 1 0 1 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droAna3 scaffold_13335:2334359-2334729 + dan_2285 GACT----------------GCGTC--------------------------------------------------------------------------AT--------------C-------------TGCCCAAGGACATAGTGGCCTTGAAGAATCTAACGGAGGTAGGGA----ATTATAT---------------TT----------------------------------TGTTTA---TTTAACTCTTATATTTAAAACTCTTATACTACGTAT-CGTAACTGTTCT----------------------------------------------GTCATTACGTATACGTAATTTGTTTCCC-------ACATTACGTATACGTAATATGT-ACCATTCCGCAAAATGCA-------CTGCCTACGTTGCGTATAC-GCAATATTTGAATTTTTATTGAAATA--AATATAAAAAAAGAAAACAAAATATTTATTAAAAATATAA-ATACAATTTTATAGAATCT--GTTTCATACTAACCTTT-----------TCTTTTTTCCAGCTAAGTCTCCGCGACAATCCTTTGGTGGTCCGCTTCGTCCAGGACATGGC
droBip1 scf7180000395653:26527-26965 + GACT----------------GCGTC--------------------------------------------------------------------------AT--------------T-------------TGCCCAAGGACATTGTGGCCTTGAAGAATTTAACGGAGGTAAGGATAACGATATATTTGGGGTTTTAATATTTTGGGTTTTAAAAAGAAGACCTAGATTAAAACTTTTAAAAATATTTTA--ACCTA-ATTTAAAACTTTAATTTTATTTATTTTTAATTTTTTA--------AATAATCATTAAGTTTTTCATAATATTTTCTATAATTTTTCATTACGTATACGTAATATTTTTTCCTATTTTTATATTACGTATACGTAATATTCAATTATTTTTCAAA---CAAAAAATA----AATAA------ATATTCTG---TTAAAAT-------CAAAAATTTAAATTAAATTTAATATTAT---------------------------------ATAATTAAATTTTTAAACTAACCTTTGATTTCTTAATTTCCATCTCCAGCTGAGTCTTCGTGACAATCCATTGGTGGTTCGCTTCGTCCAGGACATGGC
droKik1 scf7180000302698:762879-762956 + TTCT----------------AAA----------------C--------------TCTC------------------------------------------T--------------T-------------T-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T-----------ACCATTCCACAGTTGAGTTTGCGCGACAATCCGCTGGTGGTTCGCTTCGTCCAGGACATGGC
droFic1 scf7180000454050:303029-303183 - TAAG----------------TATTCAATTAGAAATGGAAA--------------TACCTTTTACCATTAAAAAAAACTGTACAAAAGATGTACCATTTTATAAATCTTTTCATAACCAA-------TTCT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCTAATTTACAGCTGAGTCTGCGCGACAATCCGCTGGTGGTGCGGTTCGTGCAGGAAATGGC
droEle1 scf7180000491087:274686-274746 + C----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCATTCACAGCTGAGTCTGCGCGACAATCCGCTGGTGGTGCGCTTCGTGCAGGACATGGC
droRho1 scf7180000777289:37305-37368 - TTGC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCGTCCACAGCTGAGTCTGCGCGACAATCCGCTGGTGGTGCGCTTCGTCCAGGACATGGC
droBia1 scf7180000302126:3239718-3239770 - ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGCTGAGTCTGCGCGACAATCCGCTGGTGGTGCGCTTCGTGCAGGACATGGC
droTak1 scf7180000415394:162345-162594 - GCCT----------------GCGCC--------------------------------------------------------------------------AT--------------C-------------TGCCCAAGGACATTGTGGCCCTGAAGAACCTGACGGAGGTGAGATCGTTATTATAT---------------TA----------------------------------TAATAA---TATAGTACCTA-ATATTAAATTATGATAATA-ATAT-AGTACCCAATATTATATTATAATAACA-----------------------------------------------ATATAGTACCCA-------ATATTATATTAAAATAATAA---------------------------------TATA------GTAC-CCGATATTAAAAT-------TTAATAATAATATAATACCCAATATTAAAT--TATATTAATAATATAATATACAATATTATA--------------------------------------------------------------------------------------------------
droEug1 scf7180000409538:355580-355656 + TGAC----------------CTT----------------C--------------GTT------------------------------------------CT---------------------------CT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTCATTCACAGCTAAGTCTCCGCGACAATCCGCTGGTGGTACGCTTTGTGCAGGATATGGC
dm3 chrX:1862273-1862419 + TTGT----------------TCTTC--------------------------------------------------------------------------GT--------------T-------------TACA------------------------------------------------------------------------------------------------------------------TATTACGTATACGCAATTTTTGAATATTACGTATACGTAATTTTTGG----------------------------------------------CATATTACGTATACGTAATTTTTTTATC-------ATATTACGTATACGTAATT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TT---GGCATATTACGTATACGTAATTTTTGGAATATTAT
droSim2 x:9849212-9849277 - CTCT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTCATCTACAGCTGAGCCTACGTGACAATCCGCTGGTGGTGCGCTTCGTCCAGGACATGGC
droSec2 scaffold_15:1084501-1084566 - CTCT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTCATCTACAGCTGAGCCTACGTGACAATCCGCTGGTGGTGCGCTTCGTCCAGGACATGGC
droYak3 X:18950484-18950619 - ACTATATAATAATTAACGACTTT----------------CATAAATCATTTAATGGTA------------------------------CGTA--------TCATTCTT-ACTGATCCG----TTTGCTTCCTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CATCATCCACAGTTGAGTCTGCGTGACAATCCGCTGGTGGTGCGCTTCGTGCAGGACATGGC
droEre2 scaffold_4690:4751058-4751144 + CTGA----------------TCC-----------------------------------------------------------------------ACATCAT--------------CCG----TCTGCTCG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTCCTCCACAGTTGAGTCTGCGTGACAATCCGCTGGTGGTGCGCTTCGTGCAGGACATGGC
dp5 XL_group1e:5724730-5724784 - GGCT----------------GCGCC--------------------------------------------------------------------------AC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGCCCAAGGACATTGTGGCCCTGAAGAACCTAACGGAGGTAGG
droPer2 scaffold_21:653372-653426 - GGCT----------------GCGCC--------------------------------------------------------------------------AC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGCCCAAGGACATTGTGGCACTGAAGAACCTAACGGAGGTAGG
droWil2 scf2_1100000004963:2391178-2391229 + -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTGAGTCTGCGTGACAATCCGCTGGTGGTGCGTTTCGTTCAGGACATGGC
droVir3 scaffold_12932:1709178-1709242 - CCTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCAATCTTAGCTGAGCTTGCGGGATAATCCGCTGGTGGTGCGCTTTGTGCAGGACATGGC
droMoj3 scaffold_6473:5243165-5243271 - TTAT----------------ATA----------------A--------------GATC------------------------------TGTC--------TCAATCTCAACTCAATCGATCTTCTGCTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCTGCCTTTAGCTGAGCTTGCGCGACAATCCGCTGGTGGTGCGCTTTGTGCAGGACATGGC
droGri2 scaffold_15203:7323001-7323096 + TAAT----------------CATC----------------------------------------------------------------------ATTTTATTAATTTCATTCTGCTTGA--------TCTTTCCA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTAGCTGAGCCTCCGTGATAATCCGCTGGTGGTGCGGTTCGTGCAGGACATGGC

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droAna3
GACT----------------GCGTC--------------------------------------------------------------------------AT--------------C-------------TGCCCAAGGACATAGTGGCCTTGAAGAATCTAACGGAGGTAGGGA----ATTATAT---------------TT----------------------------------TGTTTA---TTTAACTCTTATATTTAAAACTCTTATACTACGTAT-CGTAACTGTTCT----------------------------------------------GTCATTACGTATACGTAATTTGTTTCCC-------ACATTACGTATACGTAATATGT-ACCATTCCGCAAAATGCA-------CTGCCTACGTTGCGTATAC-GCAATATTTGAATTTTTATTGAAATA--AATATAAAAAAAGAAAACAAAATATTTATTAAAAATATAA-ATACAATTTTATAGAATCT--GTTTCATACTAACCTTT-----------TCTTTTTTCCAGCTAAGTCTCCGCGACAATCCTTTGGTGGTCCGCTTCGTCCAGGACATGGCSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
...............................................................................................................................................GTGGCCTTGAAGAATCTAAC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................20135.003571430110
...............................................................................................................................................GTGGCCTTGAAGAATCTAACGG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................22110.0010720001
...............................................................................................................................................GTGGCCTTGAAGAATCTAACG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2118.008332000
............................................................................................................................................ATAGTGGCCTTGAAGAATCTAAC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2317.007420001
..............................................................................................................................................AGTGGCCTTGAAGAATCTAAC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2117.007052000
...........................................................................................................................................CATAGTGGCCTTGAAGAATCTAACGG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2614.004300001
GACT----------------GCGTC--------------------------------------------------------------------------AT--------------C-------------TGCCCAAGGACATA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2613.003200100
...............................................................................................................................................GTGGCCTTGAAGAATCTAACGGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2313.003300000
................................................................................................................................................TGGCCTTGAAGAATCTAACGG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.002200000
.................................................................................................................................................GGCCTTGAAGAATCTAACG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.002010010
............................................................................................................................................ATAGTGGCCTTGAAGAATCTAACG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.002000020
..........................................................................................................................................ACATAGTGGCCTTGAAGAATCTAAC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.002110000
GACT----------------GCGTC--------------------------------------------------------------------------AT--------------C-------------TGCCCAAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.002110000
.........................................................................................................................................GACATAGTGGCCTTGAAGAATCTAAC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.002020000
...................................................................................................AT--------------C-------------TGCCCAAGGACATAGTGGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001010000
........................C--------------------------------------------------------------------------AT--------------C-------------TGCCCAAGGACATA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001100000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTAAGTCTCCGCGACAATCCTTTGGTG.......................2711.001100000
...T----------------GCGTC--------------------------------------------------------------------------AT--------------C-------------TGCCCAAGGG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATCCTTTGGTGGTCCGCTTCGT............2311.001001000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTTTGGTGGTCCGCTTCGTCC..........2211.001010000
.................................................................................................................................................GGCCTTGAAGAATCTAACGGAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001010000
........................................................................................................................................GGACATAGTGGCCTTGAAGAATCTAACG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001100000
..............................................................................................................................................AGTGGCCTTGAAGAATCTAACGGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001100000
........................C--------------------------------------------------------------------------AT--------------C-------------TGCCCAAGGACATAGTGGCC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001010000
...............................................................................................................................................GTGGCCTTGAAGAATCTAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001001000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTTGGTGGTCCGCTTCGTCC..........2111.001100000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTCCGCGACAATCCTTTGGTGGTCCGC.................2811.001001000
........................................................................................................................................GGACATAGTGGCCTTGAAGAA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001010000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAATCCTTTGGTGGTCCGCTTT..............2211.001100000
...T----------------GCGTC--------------------------------------------------------------------------AT--------------C-------------TGCCCAAGGA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001010000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTTGGTGGTCCGCTTCGTCCAGGA......2511.001010000
..CT----------------GCGTC--------------------------------------------------------------------------AT--------------C-------------TGCCCAAGG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTTGGTGGTCCGCTTCGTC...........2011.001001000
............................................................................................................................................ATAGTGGCCTTGAAGAATCTAACGGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001100000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCCTTTGGTGGTCCGCTTC..............2011.001100000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGGTGGTCCGCTTCGT............1811.001000001
...................................................................................................................C-------------TGCCCAAGGACATAGTGGCCT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001010000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCCGCGACAATCCTTTGGTG.......................2111.001000010
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAATCCTTTGGTGGTCCGCTTC..............2211.001010000
......................................................................................................................................................................................................................................................................................................................................................................................................................GCAAAATGCA-------CTGCCTACGTTGCGTA........................................................................................................................................................................................2611.001010000
...............................................................................................................................................GTGGCCTTGAAGAATCTAACGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
GACT----------------GCGTC--------------------------------------------------------------------------AT--------------C-------------TGCCCAAGGAC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001010000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAATCCTTTGGTGGTCCGCT................2011.001100000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATCCTTTGGTGGTCCGCTTC..............2111.001100000
...................................................................................................AT--------------C-------------TGCCCAAGGACATAGTGGCCTT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001010000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGTCTCCGCGACAATCCTTT...........................2111.001010000
.............................................................................................................................................TAGTGGCCTTGAAGAATCTAACG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000010
............................................................................................................................................ATAGTGGCCTTGAAGAATCTAACGG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001010000
.............................................................................................................................................TAGTGGCCTTGAAGAATCTAACGG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001100000
.ACT----------------GCGTC--------------------------------------------------------------------------AT--------------C-------------TGCCCAAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
.................................................................................................................................................GGCCTTGAAGAATCTAAC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001010000
.....................CGTC--------------------------------------------------------------------------AT--------------C-------------TGCCCAAGGACA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCCGCGACAATCCTTTGGTGGT.....................2311.001010000
droBip1
GACT----------------GCGTC--------------------------------------------------------------------------AT--------------T-------------TGCCCAAGGACATTGTGGCCTTGAAGAATTTAACGGAGGTAAGGATAACGATATATTTGGGGTTTTAATATTTTGGGTTTTAAAAAGAAGACCTAGATTAAAACTTTTAAAAATATTTTA--ACCTA-ATTTAAAACTTTAATTTTATTTATTTTTAATTTTTTA--------AATAATCATTAAGTTTTTCATAATATTTTCTATAATTTTTCATTACGTATACGTAATATTTTTTCCTATTTTTATATTACGTATACGTAATATTCAATTATTTTTCAAA---CAAAAAATA----AATAA------ATATTCTG---TTAAAAT-------CAAAAATTTAAATTAAATTTAATATTAT---------------------------------ATAATTAAATTTTTAAACTAACCTTTGATTTCTTAATTTCCATCTCCAGCTGAGTCTTCGTGACAATCCATTGGTGGTTCGCTTCGTCCAGGACATGGCSizeHit CountTotal NormTotal
No Reads
droKik1
TTCT----------------AAA----------------C--------------TCTC------------------------------------------T--------------T-------------T-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T-----------ACCATTCCACAGTTGAGTTTGCGCGACAATCCGCTGGTGGTTCGCTTCGTCCAGGACATGGCSizeHit CountTotal NormTotal
No Reads
droFic1
TAAG----------------TATTCAATTAGAAATGGAAA--------------TACCTTTTACCATTAAAAAAAACTGTACAAAAGATGTACCATTTTATAAATCTTTTCATAACCAA-------TTCT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCTAATTTACAGCTGAGTCTGCGCGACAATCCGCTGGTGGTGCGGTTCGTGCAGGAAATGGCSizeHit CountTotal NormTotal
No Reads
droEle1
C----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCATTCACAGCTGAGTCTGCGCGACAATCCGCTGGTGGTGCGCTTCGTGCAGGACATGGCSizeHit CountTotal NormTotal
No Reads
droRho1
TTGC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCGTCCACAGCTGAGTCTGCGCGACAATCCGCTGGTGGTGCGCTTCGTCCAGGACATGGCSizeHit CountTotal NormTotal
No Reads
droBia1
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGCTGAGTCTGCGCGACAATCCGCTGGTGGTGCGCTTCGTGCAGGACATGGCSizeHit CountTotal NormTotal
No Reads
droTak1
GCCT----------------GCGCC--------------------------------------------------------------------------AT--------------C-------------TGCCCAAGGACATTGTGGCCCTGAAGAACCTGACGGAGGTGAGATCGTTATTATAT---------------TA----------------------------------TAATAA---TATAGTACCTA-ATATTAAATTATGATAATA-ATAT-AGTACCCAATATTATATTATAATAACA-----------------------------------------------ATATAGTACCCA-------ATATTATATTAAAATAATAA---------------------------------TATA------GTAC-CCGATATTAAAAT-------TTAATAATAATATAATACCCAATATTAAAT--TATATTAATAATATAATATACAATATTATA--------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEug1
TGAC----------------CTT----------------C--------------GTT------------------------------------------CT---------------------------CT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTCATTCACAGCTAAGTCTCCGCGACAATCCGCTGGTGGTACGCTTTGTGCAGGATATGGCSizeHit CountTotal NormTotal
No Reads
dm3
TTGT----------------TCTTC--------------------------------------------------------------------------GT--------------T-------------TACA------------------------------------------------------------------------------------------------------------------TATTACGTATACGCAATTTTTGAATATTACGTATACGTAATTTTTGG----------------------------------------------CATATTACGTATACGTAATTTTTTTATC-------ATATTACGTATACGTAATT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TT---GGCATATTACGTATACGTAATTTTTGGAATATTATSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAATTTTTGGAATATTT.1850.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000
droSim2
CTCT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTCATCTACAGCTGAGCCTACGTGACAATCCGCTGGTGGTGCGCTTCGTCCAGGACATGGCSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCTTCGTCCAGGACATG..1811.00101000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACAATCCGCTGGTGGTGCGCTTC..............2411.00100000000000100000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCGCTTCGTCCAGGACATG..2111.00100000010000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATCCGCTGGTGGTGCGCTTCGTCC..........2511.00100010000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGGTGGTGCGCTTCGTC...........1911.00100000000000100000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACGTGACAATCCGCTGGTGGTGCGCTT...............2811.00100000000000100000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGAGCCTACGTGACAATCC..............................2011.00100000100000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATCCGCTGGTGGTGCGCTT...............2011.00100010000000000000
droSec2
CTCT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTCATCTACAGCTGAGCCTACGTGACAATCCGCTGGTGGTGCGCTTCGTCCAGGACATGGCSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGACAATCCGCTGGTGGTGCGCTTCGT............2711.0010010
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGCGCTTCGTCCAGGACATGGC2411.0010010
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACGTGACAATCCGCTGGTGG......................2111.0011000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATCCGCTGGTGGTGCGCTTCGT............2311.0010100
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCGCTTCGTCCAGGACATGGC2311.0010100
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCCGCTGGTGGTGCGCTTCGTCCAGGA......2811.0010100
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTACGTGACAATCCGCTGGTGGTGCGC.................2711.0010100
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAATCCGCTGGTGGTGCGCTT...............2111.0011000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATCCGCTGGTGGTGCGCTTC..............2111.0010010
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTGAGCCTACGTGACAATCC..............................2211.0010010
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTACGTGACAATCCGCTGGT........................2011.0010010
droYak3
ACTATATAATAATTAACGACTTT----------------CATAAATCATTTAATGGTA------------------------------CGTA--------TCATTCTT-ACTGATCCG----TTTGCTTCCTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CATCATCCACAGTTGAGTCTGCGTGACAATCCGCTGGTGGTGCGCTTCGTGCAGGACATGGCSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCGCTTCGTGCAGGACATGGC2313.00300300000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGCGCTTCGTGCAGGACATGGC2412.00200100010000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGGTGGTGCGCTTCGTGCAG........2212.00200010010000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGCGCTTCGTGCAGGACATGG.2311.00100000010000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAATCCGCTGGTGGTGCGCTTCGTGCAG........2811.00100000010000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGCGTGACAATCCGCTGGTG.......................2111.00101000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTTGAGTCTGCGTGACAATCCGCTGGT........................2811.00100000010000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACAATCCGCTGGTGGTGCGCTT...............2311.00101000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGCGTGACAATCCGCTGGTGGTGCGCT................2811.00101000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCCGCTGGTGGTGCGCTTCGTG...........2311.00100000010000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGGTGGTGCGCTTCGTG...........1811.00101000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGCGTGACAATCCGCTGGTGGT.....................2311.00101000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTGCGTGACAATCCGCTGGTG.......................2211.00101000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGCTTCGTGCAGGACAT...1811.00100100000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGAGTCTGCGTGACAATCCGCTGGT........................2711.00100000010000
droEre2
CTGA----------------TCC-----------------------------------------------------------------------ACATCAT--------------CCG----TCTGCTCG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTCCTCCACAGTTGAGTCTGCGTGACAATCCGCTGGTGGTGCGCTTCGTGCAGGACATGGCSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATCCGCTGGTGGTGCGCTTCGTGCAG........2713.0030001200
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGAGTCTGCGTGACAATCCGCT...........................2411.0010000100
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAATCCGCTGGTGGTGCGCTT...............2111.0011000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACAATCCGCTGGTGGTGCGCT................2211.0011000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATCCGCTGGTGGTGCGCTTCGTGCAGGA......2911.0010000100
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGCGCTTCGTGCAGGACATGGC2411.0010000100
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCCGCTGGTGGTGCGCTTCGTGCA.........2511.0010000100
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGCTGGTGGTGCGCTTCGT............2011.0010000100
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACAATCCGCTGGTGGTGCGCTTCGT............2611.0010000010
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAATCCGCTGGTGGTGCGCTTCGT............2511.0010000010
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGGTGGTGCGCTTCGTGCAGG.......2211.0010010000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGCTGGTGGTGCGCTTCGTGCAG........2411.0010000100
...............................................................................................CATCAT--------------CCG----TCTGCTCG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTCC.........................................................2211.0010000010
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGGTGGTGCGCTTCGTGCAGGA......2411.0010000100
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGTGCGCTTCGTGCAGGA......2011.0010001000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATCCGCTGGTGGTGCGCTTCGTGC..........2511.0010000010
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCCGCTGGTGGTGCGCTTCGTGCAG........2611.0010000010
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCGCTTCGTGCAGGACATGGC2311.0010010000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGCGTGACAATCCGCTGGTGGTGC...................2511.0011000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGCGCTTCGTGCAGGACATG..2211.0010000100
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGCGTGACAATCCGCTGGT........................2011.0011000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGCTTCGTGCAGGACAT...1811.0011000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGGTGGTGCGCTTCGTGCAGG.......2311.0011000000
dp5
GGCT----------------GCGCC--------------------------------------------------------------------------AC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGCCCAAGGACATTGTGGCCCTGAAGAACCTAACGGAGGTAGGSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATTGTGGCCCTGAAGAACCTAACGGA......2713.0030001000002
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGTGGCCCTGAAGAACCTAACGGA......2613.0030000000003
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGACATTGTGGCCCTGAAG.................1912.0020110000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCTGAAGAACCTAACGGAGT....2111.0010100000000
....................................................................................................C----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGCCCAAGGACATTGTGGCCCTGAA..................2711.0010100000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACATTGTGGCCCTGAAGAACCTAACGG.......2811.0010100000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCCTGAAGAACCTAACGGA......2011.0010100000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCCCAAGGACATTGTGGCCCTGAAG.................2611.0010100000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCCCTGAAGAACCTAACGGA......2111.0010100000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGTGGCCCTGAAGAACCTAACGGAG.....2711.0010100000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAAGGACATTGTGGCCCTGAA..................2211.0010100000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAAGGACATTGTGGCCCT.....................1911.0010100000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGCCCTGAAGAACCTAACG........2111.0010100000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGTGGCCCTGAAGAAC..............1811.0010000010000
droPer2
GGCT----------------GCGCC--------------------------------------------------------------------------AC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGCCCAAGGACATTGTGGCACTGAAGAACCTAACGGAGGTAGGSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGGACATTGTGGCACTGA...................1914.004400000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACTGAAGAACCTAACGG.......1914.004400000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAGGACATTGTGGCACTGA...................2014.004400000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACTGAAGAACCTAACGG.......1813.003300000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGCACTGAAGAACCTAACGG.......2213.003300000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATTGTGGCACTGAAGAACCTAACG........2512.002200000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACTGAAGAACCTAACGGAG.....2012.002200000
...T----------------GCGCC--------------------------------------------------------------------------AC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGCCCAAGGAC................................2012.002200000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACATTGTGGCACTGAAGAACCTAACGGA......2812.002200000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGCACTGAAGAACCTAACGGA......2311.001100000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACTGAAGAACCTAACGGA......2011.001100000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGTGGCACTGAAGAACCTAACGG.......2511.001100000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAAGGACATTGTGGCAC......................1811.001100000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACTGAAGAACCTAACGGG......1911.001100000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAGGACATTGTGGCACTGAA..................2111.001100000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACTGAAGAACCTAACGGA......1911.001100000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCACTGAAGAACCTAACGGAGT....2311.001100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGACATTGTGGCACTGA...................1811.001100000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTGAAGAACCTAACGGAG.....1911.001000010
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGTGGCACTGAAGAACCTAACGGAG.....2611.001000001
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATTGTGGCACTGAAGAACCTA...........2211.001100000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAGGACATTGTGGCACTGAAG.................2211.001100000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGCACTGAAGAACCTAACG........2111.001010000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACATTGTGGCACTGAAGAACCTAACGGG......2811.001100000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATTGTGGCACTGAAGAACCTAAC.........2411.001100000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGCACTGAAGAACCTAACGGAG.....2411.001100000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGTGGCACTGAAGAACCTAACGGA......2611.001100000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATTGTGGCACTGAAGAACCTAACGGA......2711.001100000
droWil2
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTGAGTCTGCGTGACAATCCGCTGGTGGTGCGTTTCGTTCAGGACATGGCSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACAATCCGCTGGTGGTGCGT.................2114.00400310
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGAGTCTGCGTGACAATC...............................2013.00300300
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATCCGCTGGTGGTGCGTTTCGT............2312.00200011
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGCGTTTCGTTCAGGAC.....1912.00200110
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGCGTGACAATCCGCTGGTGGTGCGT.................2712.00200110
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGGTGGTGCGTTTCGTTCAGGA......2412.00200020
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCTGGTGGTGCGTTTCGTTCAGGA......2512.00201010
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTGACAATCCGCTGGTGGTG....................2112.00202000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACAATCCGCTGGTGGTGCGTTTCGT............2612.00201100
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACAATCCGCTGGTGGTGCGTTTC..............2412.00200020
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGGTGCGTTTCGTTCAGGAC.....2212.00220000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCTGGTGGTGCGTTTCGTTCAGGACC....2711.00100010
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGGTGGTGCGTTTCGTTCAG........2111.00100010
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGCTGGTGGTGCGTTTCGTTCAGGA......2611.00100001
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAATCCGCTGGTGGTGCGTTTCGTTCAG........2811.00100100
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCGCTGGTGGTGCGTTTCGTTCAGGA......2711.00100100
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCTGCGTGACAATCCGCTGGTGGTGCGT.................2911.00100100
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACAATCCGCTGGTGGTGCGTTTCGTT...........2711.00100100
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCTGGTGGTGCGTTTCGTTCA.........2211.00100010
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACAATCCGCTGGTGGTGC...................1911.00101000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCGTTTCGTTCAGGACA....1911.00100010
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGTTTCGTTCAGGACATGGC2111.00100100
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCGTGACAATCCGCTGGTGGTGCGTTTC..............2911.00100100
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCTGGTGGTGCGTTTCGT............1911.00100001
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGACAATCCGCTGGTGGTGCGT.................2311.00100100
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGGTGGTGCGTTTCGTTCAGG.......2311.00100100
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGCGTTTCGTTCAGGACAT...2111.00100010
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGGTGGTGCGTTTCGTTCAGG.......2211.00100100
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCTGGTGGTGCGTTTCGTTCAGGAC.....2611.00100010
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATCCGCTGGTGGTGCGTT................1911.00100001
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGACAATCCGCTGGTGGTGCGTTTC..............2611.00101000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGTCTGCGTGACAATCCGCTGGT........................2411.00100010
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCTGGTGGTGCGTTTCGTTCAGG.......2411.00100010
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCTGCGTGACAATCCGCTGGTGGTGC...................2711.00101000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTTTCGTTCAGGACATGG.1911.00100100
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATCCGCTGGTGGTGCGTTTCGTTCA.........2611.00100100
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAGTCTGCGTGACAATCCGCTGGT........................2511.00100100
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCGCTGGTGGTGCGTTTCGTT...........2211.00100010
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCTGGTGGTGCGTTTCG.............1811.00100010
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGCGTGACAATCCGCTGGTGGTGC...................2511.00101000
droVir3
CCTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCAATCTTAGCTGAGCTTGCGGGATAATCCGCTGGTGGTGCGCTTTGTGCAGGACATGGCSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGATAATCCGCTGGTGGTGC...................2113.003002100000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGTGCGCTTTGTGCAGGAC.....2112.002000100000000000000000000000000010000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGCGCTTTGTGCAGGACATGGC2412.002000000000000000100100000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGATAATCCGCTGGTGGTGCGCTTT..............2611.001001000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATAATCCGCTGGTGGTGCGCTTTGTG...........2711.001001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGAGCTTGCGGGATAATCCGC............................2211.001001000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGGTGGTGCGCTTTGTGCAGGA......2311.001000000000000000000000000000000000000000000000000000000000000010
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATAATCCGCTGGTGGTGCGCTTTGT............2611.001000000000000000000000010000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGATAATCCGCTGGTGGTG....................2011.001001000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGGATAATCCGCTGGTGGTGC...................2211.001001000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATAATCCGCTGGTGGTGCGCTTTGC............2611.001000100000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGATAATCCGCTGGTGGT.....................1911.001001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCCGCTGGTGGTGCGCTTTGTGCAGGA......2811.001000000000000000000000000000000000000000000000000000000000000010
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATAATCCGCTGGTGGTGCGCT................2211.001000100000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGTGGTGCGCTTTGTGCAGGA......2211.001000000000000000000000000000001000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTTGTGCAGGACATGGC1811.001001000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGCTGGTGGTGCGCTTTG.............1911.001001000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGGTGGTGCGCTTTGTGCAGGAC.....2511.001000000000000000000000000000000000000000000000000000000000000010
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGAGCTTGCGGGATAATCCGCTG..........................2511.001000000000100000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATCCGCTGGTGGTGCGCTTTGT............2311.001000000000000000000000000000001000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAATCTTAGCTGAGCTTGCGGGA....................................2411.001000000000000000000000000100000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGAGCTTGCGGGATAATCCGCT...........................2411.001000000000000000100000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATAATCCGCTGGTGGTGCGCTTTGTGC..........2811.001000100000000000000000000000000000000000000000000000000000000000
droMoj3
TTAT----------------ATA----------------A--------------GATC------------------------------TGTC--------TCAATCTCAACTCAATCGATCTTCTGCTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCTGCCTTTAGCTGAGCTTGCGCGACAATCCGCTGGTGGTGCGCTTTGTGCAGGACATGGCSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCCGCTGGTGGTGCGCTTTGTGC..........2411.001100000
..........................................................................................................................TCTGCTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCTGCCTTTAG..................................................1911.001100000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCGCTTTGTGCAGGACATGG.2211.001100000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACAATCCGCTGGTGGTG....................1811.001100000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGCTTGCGCGACAATCCGCTG..........................2211.001100000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGCTGGTGGTGCGCTTTGT............2011.001100000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATCCGCTGGTGGTGCGCTTTGTGCAG........2711.001100000
droGri2
TAAT----------------CATC----------------------------------------------------------------------ATTTTATTAATTTCATTCTGCTTGA--------TCTTTCCA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTAGCTGAGCCTCCGTGATAATCCGCTGGTGGTGCGGTTCGTGCAGGACATGGCSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCCGCTGGTGGTGCGGTTCGTGCAGGA......2812.00202
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGGTGCGGTTCGTGCAGGA......2112.00211
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGGTGGTGCGGTTCGTGCA.........2112.00211
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGGTGGTGCGGTTCGTGCAGG.......2212.00202
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGAGCCTCCGTGATAATCCGCTG..........................2411.00101
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCTGGTGGTGCGGTTCGTGCA.........2211.00110
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGGTGGTGCGGTTCGTG...........1911.00101
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCCGCTGGTGGTGCGGTTCGTGCAGG.......2711.00101
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGCGGTTCGTGCAGGACATG..2211.00101
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCGGTTCGTGCAGGACATG..2111.00101
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGGTGGTGCGGTTCGTGCAGG.......2311.00101

Generated: 05/18/2015 at 04:12 AM