ID:

dan_2260

 Coordinate:

scaffold_13335:1622409-1622559 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-13.2 -13.2 -13.1

Flybase annnotation

exon [dana_GLEANR_21563:5]; CDS [Dana\GF19521-cds]; intron [Dana\GF19521-in]

Repeatable elements

NameClassFamilyStrand
AT_richLow_complexityLow_complexity+
mature
  1. scaffold_6355:40-58 +
  2. scaffold_6658:3603-3621 +
  3. scaffold_10207:11226-11244 +
  4. scaffold_12217:5590-5608 +
  5. scaffold_12613:178269-178287 +
  6. scaffold_12916:7240858-7240876 +
  7. scaffold_12916:15332809-15332827 +
  8. scaffold_12929:1725984-1726002 +
  9. scaffold_13045:998882-998900 +
  10. scaffold_13082:156807-156825 +
  11. scaffold_13082:2990778-2990796 +
  12. scaffold_13089:486079-486097 +
  13. scaffold_13117:4535337-4535355 +
  14. scaffold_13248:1403902-1403920 +
  15. scaffold_13248:3423263-3423281 +
  16. scaffold_13266:40019-40037 +
  17. scaffold_13266:7671901-7671919 +
  18. scaffold_13266:9180554-9180572 +
  19. scaffold_13334:1082433-1082451 +
  20. dan_2260  scaffold_13335:1622520-1622538 +
star

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
AGGACCAGAAATATGATCTTGAGTATGTTGTTAAACGCAAGGATGTTGAGGTACACGAACACTCTACTATAATACCAAATATAATGCCTATATCTAAATCAATCCTCGATCAAAATCAAAAGTTAACGCTTAACAAGGGGGGGGTTTTGGCGCGGGGGGGAAGAAAAAAAAAAAAAAAAATATATATTCAACAACTCACCTAAGATAGAATGCAACATGCAACTAAATTTAATTCAATTCAATCAAAAACA
**************************************************..........................................(((...((..((((((.((((((((....(((((...)))))........))))))))..)))))).))))).....................................************************************************** 		Read size # Mismatch Hit Count Total Norm Total M058
embryo
 V039
embryo
 V105
male body		 V055
head
 M044
female body
 V106
head
.............................GTTAAACGCAAGGATGTTGA.......................................................................................................................................................................................................... 20 0 1 10.00 10 4 4 1 0 1 0
..........................GTTGTTAAACGCAAGGATGTTGA.......................................................................................................................................................................................................... 23 0 1 4.00 4 0 2 2 0 0 0
......................GTATGTTGTTAAACGCAAGGATGTTGA.......................................................................................................................................................................................................... 27 0 1 2.00 2 1 0 1 0 0 0
.........................GGCTGGTAAACGCAAGGATGTT............................................................................................................................................................................................................ 22 3 1 2.00 2 0 0 0 2 0 0
........................ATGTTGTTAAGCGCAAGGATGTTGA.......................................................................................................................................................................................................... 25 1 1 1.00 1 1 0 0 0 0 0
...............................TAAACGCAAGGATGTTGAG......................................................................................................................................................................................................... 19 0 1 1.00 1 0 1 0 0 0 0
............................TGTTAAACGCAAGGATGTTGA.......................................................................................................................................................................................................... 21 0 1 1.00 1 0 1 0 0 0 0
.....CAGAAATATGATCTTGAGTATGTT.............................................................................................................................................................................................................................. 24 0 1 1.00 1 0 0 0 1 0 0
.....CAGAAATATGATCTTGAGTATGT............................................................................................................................................................................................................................... 23 0 1 1.00 1 1 0 0 0 0 0
.....CACAAATATGATCTTGAGTATGT............................................................................................................................................................................................................................... 23 1 1 1.00 1 1 0 0 0 0 0
......................GTATGTTGTTAAACGCAAGGATGC............................................................................................................................................................................................................. 24 1 1 1.00 1 1 0 0 0 0 0
........................ATGTTGTTAAACGCAAGGATGTTGA.......................................................................................................................................................................................................... 25 0 1 1.00 1 0 0 1 0 0 0
..GACCAGAAATATGATCTTGAGTATGT............................................................................................................................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0
..........................GTTGTTAAACGCAAGGATGTT............................................................................................................................................................................................................ 21 0 1 1.00 1 1 0 0 0 0 0
.....................AGTATGTTGTTAAACGCAAGGATGTT............................................................................................................................................................................................................ 26 0 1 1.00 1 1 0 0 0 0 0
..............GATCTTGAGTATGTTGTT........................................................................................................................................................................................................................... 18 0 1 1.00 1 1 0 0 0 0 0
.............................GTTAAACGCAAGGATGTTGAGA........................................................................................................................................................................................................ 22 1 1 1.00 1 0 0 0 0 1 0
.........AATATGATCTTGAGTATGTTGT............................................................................................................................................................................................................................ 22 0 1 1.00 1 1 0 0 0 0 0
.............................GTTAAGCGCAAGGATGTTGAG......................................................................................................................................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0
......................GGATGTTGTTAAACGCAAGGATGTT............................................................................................................................................................................................................ 25 1 1 1.00 1 1 0 0 0 0 0
.GGACCAGAAATATGATCTTGAGC................................................................................................................................................................................................................................... 23 1 1 1.00 1 1 0 0 0 0 0
.....................AGTATGTTGTTAAACGCAAGGATGTTGA.......................................................................................................................................................................................................... 28 0 1 1.00 1 1 0 0 0 0 0
.....CAGAAATATGATCTTGAGT................................................................................................................................................................................................................................... 19 0 1 1.00 1 1 0 0 0 0 0
............................TGCTAAACGCAAGGATGTTGA.......................................................................................................................................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0
.............................GGTAAACGCAACGATGTTGA.......................................................................................................................................................................................................... 20 2 1 1.00 1 0 1 0 0 0 0
............................TGCTAAACGCAAGGATGTTGAGAT....................................................................................................................................................................................................... 24 2 1 1.00 1 1 0 0 0 0 0
..........................GGTGTTAAACGCAAGGATGTTGACC........................................................................................................................................................................................................ 25 3 1 1.00 1 1 0 0 0 0 0
................................AAACGCAAGGATGTTGAG......................................................................................................................................................................................................... 18 0 1 1.00 1 1 0 0 0 0 0
.............................GTTAAGCGCAAGGATGTTGAGA........................................................................................................................................................................................................ 22 2 1 1.00 1 1 0 0 0 0 0
............................TGTCAAACGCAAGGATGTTGA.......................................................................................................................................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0
..............................TTAAACGCAAGGATGTTGAGAT....................................................................................................................................................................................................... 22 1 1 1.00 1 0 0 1 0 0 0
.......GAAATATGATCTTGAGTATGTT.............................................................................................................................................................................................................................. 22 0 1 1.00 1 0 0 1 0 0 0
..........ATATGATCTTGAGTATGTTGC............................................................................................................................................................................................................................ 21 1 1 1.00 1 1 0 0 0 0 0
....................................................................................................................................................................................................................CAACTTGCCACTAAATATAATTC................ 23 3 2 0.50 1 0 0 0 0 1 0
......................GGACGTTGTTAAACGCAAGGATGC............................................................................................................................................................................................................. 24 3 2 0.50 1 1 0 0 0 0 0
.............................GTTAAACGCAAGGATTTTTA.......................................................................................................................................................................................................... 20 2 3 0.33 1 0 1 0 0 0 0
.................................................................................................................................................TTGGGCGCGGGGGGGAGG........................................................................................ 18 2 8 0.25 2 0 0 0 2 0 0
.........................GGCTGTTAAACGCAAGGATGGT............................................................................................................................................................................................................ 22 3 9 0.22 2 0 0 0 2 0 0
.................................................................................................................................................TTGGGCGCGGGGGGGAGGA....................................................................................... 19 2 5 0.20 1 0 0 0 1 0 0
...................................................................................................................................AACAACGGGGGGGTTGTG...................................................................................................... 18 2 5 0.20 1 0 0 0 1 0 0
.................................................................................................................................................................................AAATATAAAGTCAACAACCCAC.................................................... 22 3 7 0.14 1 1 0 0 0 0 0
........................................................................................................................................CGGGGGGGTTTTGGCGAG................................................................................................. 18 2 7 0.14 1 0 0 0 1 0 0
.................................................................................................................................................................AGAAAAAAAAAAAAAAAAA....................................................................... 19 0 20 0.10 2 2 0 0 0 0 0
...............................................................................................................................................................GAAGAAAAAAAAAAAAAA.......................................................................... 18 0 20 0.10 2 1 1 0 0 0 0
.............................................................................................................................................GCGTTTTGGCGCCGGGTGGA.......................................................................................... 20 3 10 0.10 1 0 0 0 1 0 0
............................TGTTAACCGCAAGGTTGTT............................................................................................................................................................................................................ 19 2 11 0.09 1 0 0 0 1 0 0
..............................................................................................................................................................GGAAGAAAAAAAAAAAAAAAA........................................................................ 21 0 14 0.07 1 1 0 0 0 0 0
.............................................................................................................................................................GGGAAGACAAAAAAAAAAAAA......................................................................... 21 1 14 0.07 1 1 0 0 0 0 0
..........................................................................................................................................GGGGGGTTTTGGCTGGGGCG............................................................................................. 20 3 15 0.07 1 0 0 0 0 0 1
.............................................................................................................................................................GGGAAGAAAAAAAAAGAAA........................................................................... 19 1 16 0.06 1 0 0 0 0 0 1
......................................................................................................................................................................................................................................AATACAAGTCAATCAAAAACG 21 3 17 0.06 1 0 0 0 0 1 0
......................................................................................................................................................................................TCTATTCAACAACCCACCA.................................................. 19 3 20 0.05 1 1 0 0 0 0 0
.........................................................................................................................................................GGGGGGGAAGAAAAACTAAC.............................................................................. 20 3 20 0.05 1 0 0 0 1 0 0
.................................................................................................................................................TTGGGCGCGGGGGGGAGGAT...................................................................................... 20 3 20 0.05 1 0 0 0 1 0 0
...............................................................................................................................................................GAAGAAAAAAAAGAAAAAAACT...................................................................... 22 2 20 0.05 1 1 0 0 0 0 0
...........................................................................................................................TAACGCGTAACACGGCGG.............................................................................................................. 18 3 20 0.05 1 0 0 0 1 0 0
.............................................................................................................................................................GGGAAGAAAAAATGAAAAAAGA........................................................................ 22 3 20 0.05 1 0 0 1 0 0 0
..........................................................................................................................................................GGAGGGAAGCAAAAAAAAGAAAAA......................................................................... 24 3 20 0.05 1 0 0 0 0 1 0
..........................GATGTTAAACGGAAGGCTG.............................................................................................................................................................................................................. 19 3 20 0.05 1 0 0 0 1 0 0

Anti-sense strand reads

TCCTGGTCTTTATACTAGAACTCATACAACAATTTGCGTTCCTACAACTCCATGTGCTTGTGAGATGATATTATGGTTTATATTACGGATATAGATTTAGTTAGGAGCTAGTTTTAGTTTTCAATTGCGAATTGTTCCCCCCCCAAAACCGCGCCCCCCCTTCTTTTTTTTTTTTTTTTTATATATAAGTTGTTGAGTGGATTCTATCTTACGTTGTACGTTGATTTAAATTAAGTTAAGTTAGTTTTTGT
**************************************************..........................................(((...((..((((((.((((((((....(((((...)))))........))))))))..)))))).))))).....................................************************************************** 		Read size # Mismatch Hit Count Total Norm Total M058
embryo
 V106
head
 V105
male body
...............................................................GATGATCTTATGGTTTCT.......................................................................................................................................................................... 18 2 4 0.75 3 0 2 1
...............................................CACCATGTCCTTGTGAGA.......................................................................................................................................................................................... 18 2 2 0.50 1 1 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droAna3 scaffold_13335:1622359-1622609 + dan_2260 AGGACCAGAAATATGATCTTGAGTATGTTGTTAAACGCAAGGATGTTGAGGTACACGAACACTC--TACTATAATACCAAATATA----------------------------------------------ATGCCTATA----TCTAAA------TC------A-AT-----------CCTCGA--------TCAAAATCAAAAGT-----------TAACGCTTAACAAGGGGGGGGTTTTGGCGCGGGGGGGAAGAAAA------------AAAAA--------AAA-----------AAAA----ATATAT-ATT-CAACAACTCACCTA-AGATAGAATGCAACATGCAACTAAATTTAATT------------------CAATTCAATCAAAAACA
droBip1 scf7180000395454:42356-42590 - AAGGCCAGAAATGGGATCTGGAATACGAAGTCAGGAAAAAAGACTGGGAGGTACTGCAA------------CAATTTCAATTTAA----------------------------------------------A-TTTCAAATCGTTCTCAATATATATC------AAAT-----------TATCAA--------TCAATGTCAAAA--------------AACTCTGAATACA----------------------AAAGAACAAAGCAATCAAAAAAAA-------TCAA--------------------ATATCAAATT-CAACAACTCACCTA-AGATAGAATGCAACATGCAACTAAATTTAATT------------------CAATTCTAAAAAAATTA
droKik1 scf7180000302696:1704657-1704852 - AAGGCCAGAAATGGGATCTGGAATACGAAGTCAGGAAAAAAGACTGGGAGGTACTGCAA------------CAATTTCAATTTCA-----ATTTAAAAC--------------------------GT-TCAA--TTC---TCGTTCTCAA------TC---------------------AATC------------AATTTCAAA---------------AACTCTGAATACA----------------------AAAGAACA-ACCAACCAACCAACAA---------------------------------------------AACTCACCCAAAGACAGAATGCAACATGCAACAAAATTGTATC-----------------------------------
droFic1 scf7180000453872:354226-354417 + AAGGCCAGAAATGGGATCTGGAATACGAAGTCAGGAAAAAAGACTGGGAGGTACTGCAA------------ATATTTCAATTAAA-----------------------------------------------ATTTCAAATCGTTCTCAA------TC---------------------AATCAA--------TCAATGTCAA----------------AACTCTGAATACA----------------------AAAGAACA-ACCAACCAAACAAAAA---------------------------------ATA-ATAAAACCAACTCACCCA-AGACAGAATGCAACA-------AAATTGTATC-----------------------------------
droEle1 scf7180000491193:208741-208934 - AAGGCCAGAAATGGGATCTGGAATACGAAGTCAGGAAAAAAGACTGGGAGGTACTGCAA------------CAATTTCAATTAAA----------------------------------------------ATTTTCAAATCGTTCTCAA------TC---------------------AATCAA--------TCAATGTCAA----------------AACTCTGAATACA----------------------AAAGAACA-ACCAACCAAACAAAAA--------------------------------AATA-ATAAAACCAACTCACCCA-AGACAGAATGCAACA-------AAATTGTATC-----------------------------------
droRho1 scf7180000779986:514551-514747 + AAGGCCAGAAATGGGATCTGGAATACGAAGTCAGGAAAAAAGACTGGGAGGTACTGCAA------------CAATTTCAATTTAA----------------------------------------------ATTTTCAAATCGTTCTCAA------TC---------------------AATCAA--------TCAATGTCAA----------------AACTCTGAATACA----------------------AAAGAACA-ACCAACCAAACAAAAA----------------------A-------ATAATA-ATAAAACCAACTCACCTA-AGACAGAATGCAACA-------AAATTGTATC-----------------------------------
droBia1 scf7180000301760:601879-602079 + AAGGCCAGAAATGGGATCTGGAATACGAAGTCAGGAAAAAAGACTGGGAGGTACTGCAA------------CAATTTCAATTTAA----------------------------------------------AATTTCAAATCGTTCTCAA------TC---------------------AATCAA--------TAAATGTCAA----------------AACTCTGAATACA----------------------AAAGAACA-ACCAACCAAACAAAAA-----ATA--T-----------A-------GTAATA-ATAAAACCAACTCACCCC-AGACAGAATGCAACA-------AAATTGTATC-----------------------------------
droTak1 scf7180000415843:475002-475213 + AAGGCCAGAAATGGGATCTGGAATACGAAGTCAGGAAAAAAGACTGGGAGGTACTGCAA------------CAATTTCAATTTCA-----ATTTA-----------------------------------AAATTTCAAATCGTTCTCAA------TC---------------------AATCAA--------TAAATGTCAA----------------AACTCTGAATACA----------------------AAAGAACA-ACCAACCAAACAAAAC--------AAA-----------AAATATATATATTA-ATAAAACCAACTCACCC--AGACAGAATGCAACA-------AAATTGTATC-----------------------------------
droEug1 scf7180000408176:680251-680471 + AAGGCCAGAAATGGGATCTGGAATACGAAGTCAGGAAAAAAGACTGGGAGGTACTGCAA------------AAATTTCAATTTCA----------------------------------------------AGTTTCAAATCGTTCTCAA------TC---------------------AATCAA--------TAAATGTCAA----------------AACTCTGAATACA----------------------AAAGAACA-ACCAACCAAACAAAAA-----ACCAAAAAAAAAAATAATAATAATTATAATT-ATAAAACCAACTCACCCA-AGACAGAATGCAACA-------AAATTGTATC-----------------------------------
dm3 chrX:18003345-18003552 - AAGGCCAGAAATGGGATCTGGAATACGAAGTCAGGAAAAAAGACTGGGAGGTACTGCAA------------CAATTTCAATTTAA----------------------------------------------ATTTTCCAATCGTTCTCAA------TC---------------------AATCAA--------TAAATGTCAA----------------AACTCTGAATACA----------------------AAAGAACA-ACCAATCAAAAAAAAAAAAAAACCAAA-----------A-------ATATTA-ATAAGACCAACTCACCCA-AGACAGAATGCAACA-------AAATTGTATC-----------------------------------
droSim2 x:17103310-17103509 - AAGGCCAGAAATGGGATCTGGAATACGAAGTCAGGAAAAAAGACTGGGAGGTACTGCAA------------CAATTTCAATTTAA----------------------------------------------ATTTTCCAATCGTTCTAAA------TC---------------------AATCAA--------TAAATGTCAA----------------AACTCTGAATACA----------------------AAAGAACA-ACCAATCAAAAAAA--------CCAAA-----------A-------ATATTA-ATAAGACCAACTCACCCA-AGACAGAATGCAACA-------AAATTGTATC-----------------------------------
droSec2 scaffold_8:309534-309735 - AAGGCCAGAAATGGGATCTGGAATACGAAGTCAGGAAAAAAGACTGGGAGGTACTGCAA------------CAATTTCAATTTAA----------------------------------------------ATTTTCCAATCGTTCTCAA------TC---------------------AATCAA--------TAAATGTCAA----------------AACTCTGAATACA----------------------AAAGAACA-ACCAATCAAAAAAAAA------CCAAA-----------A-------ATATTA-ATAAGACCAACTCACCCA-AGACAGAATGCAACA-------AAATTGTATC-----------------------------------
droYak3 X:16627643-16627840 - AAGGCCAGAAATGGGATCTGGAATACGAAGTCAGGAAAAAAGACTGGGAGGTACTGCAA------------CAATTTCAATTTAA----------------------------------------------ATTTTCCAATCGTTCTCAA------TC---------------------AATCAA--------TAAATGTCAA----------------AACTCTGAATACA----------------------AAAGAACA-ACCAATCAAAAAAATA----------A-----------A-------ATATTA-ATAAGACCAACTCACCCA-AGACAGAATGCAACA-------AAATTGTATC-----------------------------------
droEre2 scaffold_4690:8331520-8331726 - AAGGCCAGAAATGGGATCTGGAATACGAAGTCAGGAAAAAAGACTGGGAGGTACTGCAA------------CAATTCCAATTTAA----------------------------------------------ATTTTCCAATCGTTCTCAA------TC---------------------AATCAA--------TAAATGTCAA----------------AACTCTGAATACA----------------------AAAGAACA-ACCAATCAAAACAAAA--------AAA-----------ATATATATATATTA-ATAAGACCAACTCACCCA-AGACAGAATGCAACA-------AAATTGTATC-----------------------------------
dp5 XL_group3a:1998373-1998597 + AAGGCCAGAAATGGGATCTGGAATACGAAGTCAGGAAAAAAGACTGGGAGGTACTGCAC------------CAATTTCAATTTCA-----ATT----ACA-------------------------GTTTCAATTTTCAATTTGTTCTCAA------TC---------------------AATCAA--------TCAATGTCAA----------------AACTCTGAATACA----------------------AAAGAACCAACCAACCAAC----AA-----A-CAA-----------------------A-CAATT-C----AATCACTCC-AGACAGAATGCAACATGCAACAAAAATCAATT------------------AAATCAAATCAAAATCA
droPer2 scaffold_11:2683694-2683808 - AGGACCAGAAATATGATCTTGAGTATGTTGTTAAGCGCAAGGATGTTGAGGTACACACACGCCACCAGC--TATAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCTATA-------TACATATATTATATATAACTCTTCTATA------------TATAT
droWil2 scf2_1100000004909:12014020-12014081 - AGGACCAGAAATATGATCTTGAGTATGTTGTTAAGCGCAAGGATGTTGAGGTACACACA------------CAC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droVir3 scaffold_12928:1284762-1284844 + AGGACCAGAAATATGATCTTGAGTATGTTGTTAAACGCAAGGATGTTGAGGTACACGCA------------CATATCTACTACATAACTATCT----AT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droMoj3 scaffold_6473:13708308-13708440 - AGGACCAGAAATATGATCTTGAGTATGTTGTTAAACGCAAGGATGTTGAGGTACACGCA------------CATATCTACTACATAACTATCT----AT----------------------------------CTAC------CTATCTA------TC---------------------TATCTA--------TCTATTT---------------------------------------------------------------------------------------------------------------------------------------ATCCTGCGATCCACA-------TCATAAT-TT-----------------------------------
droGri2 scaffold_15203:8431420-8431614 - AGGACCAGAAATATGATCTTGAGTATGTTGTTAAACGCAAGGATGTTGAGGTACACGCA------------CATATCTACTAAATAACTATCT----ATCTATCTATCTATTATAAAATATCCAA------ATGCCTAT--------CTA--TCTATTAGCTATT-ATCTGCCAAAAAG---CGTTCCAATTATCAAAATCAAAAGTCTAAAACAACTTAATGCTT------------------------------------------------------------------------------------------------------------------------AACA-------A--------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droAna3
AGGACCAGAAATATGATCTTGAGTATGTTGTTAAACGCAAGGATGTTGAGGTACACGAACACTC--TACTATAATACCAAATATA----------------------------------------------ATGCCTATA----TCTAAA------TC------A-AT-----------CCTCGA--------TCAAAATCAAAAGT-----------TAACGCTTAACAAGGGGGGGGTTTTGGCGCGGGGGGGAAGAAAA------------AAAAA--------AAA-----------AAAA----ATATAT-ATT-CAACAACTCACCTA-AGATAGAATGCAACATGCAACTAAATTTAATT------------------CAATTCAATCAAAAACASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.............................GTTAAACGCAAGGATGTTGA.................................................................................................................................................................................................................................................................................................................................................................20110.0010144010
..........................GTTGTTAAACGCAAGGATGTTGA.................................................................................................................................................................................................................................................................................................................................................................2314.004002020
......................GTATGTTGTTAAACGCAAGGATGTTGA.................................................................................................................................................................................................................................................................................................................................................................2712.002010010
...............................TAAACGCAAGGATGTTGAG................................................................................................................................................................................................................................................................................................................................................................1911.001001000
............................TGTTAAACGCAAGGATGTTGA.................................................................................................................................................................................................................................................................................................................................................................2111.001001000
.....CAGAAATATGATCTTGAGTATGTT.....................................................................................................................................................................................................................................................................................................................................................................................2411.001000100
.....CAGAAATATGATCTTGAGTATGT......................................................................................................................................................................................................................................................................................................................................................................................2311.001010000
......................GTATGTTGTTAAACGCAAGGATGC....................................................................................................................................................................................................................................................................................................................................................................2411.001010000
........................ATGTTGTTAAACGCAAGGATGTTGA.................................................................................................................................................................................................................................................................................................................................................................2511.001000010
..GACCAGAAATATGATCTTGAGTATGT......................................................................................................................................................................................................................................................................................................................................................................................2611.001010000
..........................GTTGTTAAACGCAAGGATGTT...................................................................................................................................................................................................................................................................................................................................................................2111.001010000
.....................AGTATGTTGTTAAACGCAAGGATGTT...................................................................................................................................................................................................................................................................................................................................................................2611.001010000
..............GATCTTGAGTATGTTGTT..................................................................................................................................................................................................................................................................................................................................................................................1811.001010000
.............................GTTAAACGCAAGGATGTTGAGA...............................................................................................................................................................................................................................................................................................................................................................2211.001100000
.........AATATGATCTTGAGTATGTTGT...................................................................................................................................................................................................................................................................................................................................................................................2211.001010000
.GGACCAGAAATATGATCTTGAGC..........................................................................................................................................................................................................................................................................................................................................................................................2311.001010000
.....................AGTATGTTGTTAAACGCAAGGATGTTGA.................................................................................................................................................................................................................................................................................................................................................................2811.001010000
.....CAGAAATATGATCTTGAGT..........................................................................................................................................................................................................................................................................................................................................................................................1911.001010000
................................AAACGCAAGGATGTTGAG................................................................................................................................................................................................................................................................................................................................................................1811.001010000
.......GAAATATGATCTTGAGTATGTT.....................................................................................................................................................................................................................................................................................................................................................................................2211.001000010
..........ATATGATCTTGAGTATGTTGC...................................................................................................................................................................................................................................................................................................................................................................................2111.001010000
................................................................................................................................................................................................................................................................AGAAAA------------AAAAA--------AAA-----------AAAA----A............................................................................................19200.102020000
..............................................................................................................................................................................................................................................................GAAGAAAA------------AAAAA--------AAA-----------AA...................................................................................................18200.102011000
.............................................................................................................................................................................................................................................................GGAAGAAAA------------AAAAA--------AAA-----------AAAA----.............................................................................................21140.071010000
droBip1
AAGGCCAGAAATGGGATCTGGAATACGAAGTCAGGAAAAAAGACTGGGAGGTACTGCAA------------CAATTTCAATTTAA----------------------------------------------A-TTTCAAATCGTTCTCAATATATATC------AAAT-----------TATCAA--------TCAATGTCAAAA--------------AACTCTGAATACA----------------------AAAGAACAAAGCAATCAAAAAAAA-------TCAA--------------------ATATCAAATT-CAACAACTCACCTA-AGATAGAATGCAACATGCAACTAAATTTAATT------------------CAATTCTAAAAAAATTASizeHit CountTotal NormTotal
No Reads
droKik1
AAGGCCAGAAATGGGATCTGGAATACGAAGTCAGGAAAAAAGACTGGGAGGTACTGCAA------------CAATTTCAATTTCA-----ATTTAAAAC--------------------------GT-TCAA--TTC---TCGTTCTCAA------TC---------------------AATC------------AATTTCAAA---------------AACTCTGAATACA----------------------AAAGAACA-ACCAACCAACCAACAA---------------------------------------------AACTCACCCAAAGACAGAATGCAACATGCAACAAAATTGTATC-----------------------------------SizeHit CountTotal NormTotal
No Reads
droFic1
AAGGCCAGAAATGGGATCTGGAATACGAAGTCAGGAAAAAAGACTGGGAGGTACTGCAA------------ATATTTCAATTAAA-----------------------------------------------ATTTCAAATCGTTCTCAA------TC---------------------AATCAA--------TCAATGTCAA----------------AACTCTGAATACA----------------------AAAGAACA-ACCAACCAAACAAAAA---------------------------------ATA-ATAAAACCAACTCACCCA-AGACAGAATGCAACA-------AAATTGTATC-----------------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
AAGGCCAGAAATGGGATCTGGAATACGAAGTCAGGAAAAAAGACTGGGAGGTACTGCAA------------CAATTTCAATTAAA----------------------------------------------ATTTTCAAATCGTTCTCAA------TC---------------------AATCAA--------TCAATGTCAA----------------AACTCTGAATACA----------------------AAAGAACA-ACCAACCAAACAAAAA--------------------------------AATA-ATAAAACCAACTCACCCA-AGACAGAATGCAACA-------AAATTGTATC-----------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
AAGGCCAGAAATGGGATCTGGAATACGAAGTCAGGAAAAAAGACTGGGAGGTACTGCAA------------CAATTTCAATTTAA----------------------------------------------ATTTTCAAATCGTTCTCAA------TC---------------------AATCAA--------TCAATGTCAA----------------AACTCTGAATACA----------------------AAAGAACA-ACCAACCAAACAAAAA----------------------A-------ATAATA-ATAAAACCAACTCACCTA-AGACAGAATGCAACA-------AAATTGTATC-----------------------------------SizeHit CountTotal NormTotal
No Reads
droBia1
AAGGCCAGAAATGGGATCTGGAATACGAAGTCAGGAAAAAAGACTGGGAGGTACTGCAA------------CAATTTCAATTTAA----------------------------------------------AATTTCAAATCGTTCTCAA------TC---------------------AATCAA--------TAAATGTCAA----------------AACTCTGAATACA----------------------AAAGAACA-ACCAACCAAACAAAAA-----ATA--T-----------A-------GTAATA-ATAAAACCAACTCACCCC-AGACAGAATGCAACA-------AAATTGTATC-----------------------------------SizeHit CountTotal NormTotal
No Reads
droTak1
AAGGCCAGAAATGGGATCTGGAATACGAAGTCAGGAAAAAAGACTGGGAGGTACTGCAA------------CAATTTCAATTTCA-----ATTTA-----------------------------------AAATTTCAAATCGTTCTCAA------TC---------------------AATCAA--------TAAATGTCAA----------------AACTCTGAATACA----------------------AAAGAACA-ACCAACCAAACAAAAC--------AAA-----------AAATATATATATTA-ATAAAACCAACTCACCC--AGACAGAATGCAACA-------AAATTGTATC-----------------------------------SizeHit CountTotal NormTotal
No Reads
droEug1
AAGGCCAGAAATGGGATCTGGAATACGAAGTCAGGAAAAAAGACTGGGAGGTACTGCAA------------AAATTTCAATTTCA----------------------------------------------AGTTTCAAATCGTTCTCAA------TC---------------------AATCAA--------TAAATGTCAA----------------AACTCTGAATACA----------------------AAAGAACA-ACCAACCAAACAAAAA-----ACCAAAAAAAAAAATAATAATAATTATAATT-ATAAAACCAACTCACCCA-AGACAGAATGCAACA-------AAATTGTATC-----------------------------------SizeHit CountTotal NormTotal
No Reads
dm3
AAGGCCAGAAATGGGATCTGGAATACGAAGTCAGGAAAAAAGACTGGGAGGTACTGCAA------------CAATTTCAATTTAA----------------------------------------------ATTTTCCAATCGTTCTCAA------TC---------------------AATCAA--------TAAATGTCAA----------------AACTCTGAATACA----------------------AAAGAACA-ACCAATCAAAAAAAAAAAAAAACCAAA-----------A-------ATATTA-ATAAGACCAACTCACCCA-AGACAGAATGCAACA-------AAATTGTATC-----------------------------------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
..GGCCAGAAATGGGATCTGGAA...........................................................................................................................................................................................................................................................................................................................................................................................2117.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......GAAATGGGATCTGGAATA.........................................................................................................................................................................................................................................................................................................................................................................................1814.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000100000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........TGGGATCTGGAATACGAAGTCA.................................................................................................................................................................................................................................................................................................................................................................................2213.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000100000000000000000000000000000
.........AATGGGATCTGGAATACGAA.....................................................................................................................................................................................................................................................................................................................................................................................2013.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000021000000000000000000000000000000000000000
..GGCCAGAAATGGGATCTGGAATA.........................................................................................................................................................................................................................................................................................................................................................................................2313.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........TGGGATCTGGAATACGAAGTCAGGA..............................................................................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
.........AATGGGATCTGGAATACG.......................................................................................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............GATCTGGAATACGAAGTCAGGAAAAA..........................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........ATGGGATCTGGAATACGAAGTCAGGAAAAA..........................................................................................................................................................................................................................................................................................................................................................................3012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............GGGATCTGGAATACGAAGTCAGGA..............................................................................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........TGGGATCTGGAATACGAAGTCAG................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................TGGAATACGAAGTCAGGAAAA...........................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
.............GGATCTGGAATACGAAGTCAGGAAAA...........................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......AGAAATGGGATCTGGAATACG.......................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
AAGGCCAGAAATGGGATCT...............................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................GAAAAAAGACTGGGAGGTACTG..........................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
.......................TACGAAGTCAGGAAAAAAGACTGGGA.................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................ATACGAAGTCAGGAAAAAAGAC......................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................GGAATACGAAGTCAGGAAA............................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................ACGAAGTCAGGAAAAAAGAC......................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........TGGGATCTGGAATACGAAGTCAGGAAAAAA.........................................................................................................................................................................................................................................................................................................................................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................CGAAGTCAGGAAAAAAGACTGGGA.................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......GAAATGGGATCTGGAATACGAAGTCAGGAA.............................................................................................................................................................................................................................................................................................................................................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........AATGGGATCTGGAATACGAAGTCAGGAA.............................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............GGGATCTGGAATACGAAGT...................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............GGGATCTGGAATACGAAGTCAGG...............................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................CTGGAATACGAAGTCAGGAA.............................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..GGCCAGAAATGGGATCTGGAAT..........................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........ATGGGATCTGGAATACGAAGT...................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
...........TGGGATCTGGAATACGAAGTCAGGAAA............................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............GATCTGGAATACGAAGTCAGGAA.............................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........TGGGATCTGGAATACGAAGT...................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........ATGGGATCTGGAATACGAAGTCA.................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
...........TGGGATCTGGAATACGAAGTCAATC..............................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........ATGGGATCTGGAATACGAAGTCAATC..............................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................TCGTTCTCAA------TC---------------------AATCAA--------TAAATGT..........................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.AGGCCAGAAATGGGATCTGGAATACGAAGTCA.................................................................................................................................................................................................................................................................................................................................................................................3211.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......GAAATGGGATCTGGAAT..........................................................................................................................................................................................................................................................................................................................................................................................1711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................AAGTCAGGAAAAAAGACTGGGA.................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
.................CTGGAATACGAAGTCAGGAAAAA..........................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........AAATGGGATCTGGAATACGAAGTCA.................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
.......GAAATGGGATCTGGAATATC.......................................................................................................................................................................................................................................................................................................................................................................................2020.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................GGAAAAAAGACTGGGATC...............................................................................................................................................................................................................................................................................................................................................................1840.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................AAAAAAAAAAAAAACCAAA-----------A-------A............................................................................................21200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................GGAAAAAAGACTGGGAATC..............................................................................................................................................................................................................................................................................................................................................................19200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................AAAAAAAAAAAACCAAA-----------A-------.............................................................................................18200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................CAATCAAAAAAAAAAAAAA......................................................................................................................19200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
AAGGCCAGAAATGGGATCTGGAATACGAAGTCAGGAAAAAAGACTGGGAGGTACTGCAA------------CAATTTCAATTTAA----------------------------------------------ATTTTCCAATCGTTCTAAA------TC---------------------AATCAA--------TAAATGTCAA----------------AACTCTGAATACA----------------------AAAGAACA-ACCAATCAAAAAAA--------CCAAA-----------A-------ATATTA-ATAAGACCAACTCACCCA-AGACAGAATGCAACA-------AAATTGTATC-----------------------------------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
..............GATCTGGAATACGAAGTCAGGA..............................................................................................................................................................................................................................................................................................................................................................................2212.00200200000000000000
............................AGTCAGGAAAAAAGA.......................................................................................................................................................................................................................................................................................................................................................................1511.00100000000001000000
...................................................................................................................................................................................................................................ATACA----------------------AAAGAACA-ACCAATC....................................................................................................................................2011.00100100000000000000
...............................................GAGGTACTGCAA------------CAATTTCAATT................................................................................................................................................................................................................................................................................................................................2311.00100100000000000000
...............................................................................................................................................................................................................................CTGAATACA----------------------AAAGAA..............................................................................................................................................1590.11100000000001000000
droSec2
AAGGCCAGAAATGGGATCTGGAATACGAAGTCAGGAAAAAAGACTGGGAGGTACTGCAA------------CAATTTCAATTTAA----------------------------------------------ATTTTCCAATCGTTCTCAA------TC---------------------AATCAA--------TAAATGTCAA----------------AACTCTGAATACA----------------------AAAGAACA-ACCAATCAAAAAAAAA------CCAAA-----------A-------ATATTA-ATAAGACCAACTCACCCA-AGACAGAATGCAACA-------AAATTGTATC-----------------------------------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
..........ATGGGATCTGGAATACGAAGT...................................................................................................................................................................................................................................................................................................................................................................................2111.0010100
droYak3
AAGGCCAGAAATGGGATCTGGAATACGAAGTCAGGAAAAAAGACTGGGAGGTACTGCAA------------CAATTTCAATTTAA----------------------------------------------ATTTTCCAATCGTTCTCAA------TC---------------------AATCAA--------TAAATGTCAA----------------AACTCTGAATACA----------------------AAAGAACA-ACCAATCAAAAAAATA----------A-----------A-------ATATTA-ATAAGACCAACTCACCCA-AGACAGAATGCAACA-------AAATTGTATC-----------------------------------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.......GAAATGGGATCTGGAATACG.......................................................................................................................................................................................................................................................................................................................................................................................2012.00200000020000
.............................GTCAGGAAAAAAGACTGGGA.................................................................................................................................................................................................................................................................................................................................................................2012.00200000020000
.......GAAATGGGATCTGGAATACGAAGT...................................................................................................................................................................................................................................................................................................................................................................................2411.00100000010000
..........ATGGGATCTGGAATACGAAGTCAGG...............................................................................................................................................................................................................................................................................................................................................................................2511.00100000010000
.........AATGGGATCTGGAATACGAA.....................................................................................................................................................................................................................................................................................................................................................................................2011.00100000010000
...........TGGGATCTGGAATACGAAGT...................................................................................................................................................................................................................................................................................................................................................................................2011.00100000010000
.......GAAATGGGATCTGGAATACGAAGTCAG................................................................................................................................................................................................................................................................................................................................................................................2711.00100000010000
..........ATGGGATCTGGAATACGAAGTCA.................................................................................................................................................................................................................................................................................................................................................................................2311.00100000010000
..GGCCAGAAATGGGATCTGGA............................................................................................................................................................................................................................................................................................................................................................................................2011.00101000000000
..........ATGGGATCTGGAATACGAAGT...................................................................................................................................................................................................................................................................................................................................................................................2111.00100000010000
...........TGGGATCTGGAATACGAAGTCAGGAA.............................................................................................................................................................................................................................................................................................................................................................................2611.00100000010000
.......................TACGAAGTCAGGAAAAAAGACT.....................................................................................................................................................................................................................................................................................................................................................................2211.00100000010000
.......................TACGAAGTCAGGAAAAAAG........................................................................................................................................................................................................................................................................................................................................................................1911.00100000010000
...................GGAATACGAAGTCAGGAAAAAAGACT.....................................................................................................................................................................................................................................................................................................................................................................2611.00101000000000
droEre2
AAGGCCAGAAATGGGATCTGGAATACGAAGTCAGGAAAAAAGACTGGGAGGTACTGCAA------------CAATTCCAATTTAA----------------------------------------------ATTTTCCAATCGTTCTCAA------TC---------------------AATCAA--------TAAATGTCAA----------------AACTCTGAATACA----------------------AAAGAACA-ACCAATCAAAACAAAA--------AAA-----------ATATATATATATTA-ATAAGACCAACTCACCCA-AGACAGAATGCAACA-------AAATTGTATC-----------------------------------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
...........TGGGATCTGGAATACGAAGTCA.................................................................................................................................................................................................................................................................................................................................................................................2212.0021000010
.......................TACGAAGTCAGGAAAAAAGA.......................................................................................................................................................................................................................................................................................................................................................................2011.0011000000
..........ATGGGATCTGGAATACGAAGTCAGGA..............................................................................................................................................................................................................................................................................................................................................................................2611.0010000100
.....................................................................................................................................................................................................................................................................................................................ATATTA-ATAAGACCAACTCACCC.....................................................................2311.0010100000
.........................................................................................................................................................................................................................................................................................................................................ACCCA-AGACAGAATGCAAC.....................................................1911.0010000010
.......GAAATGGGATCTGGAATACGAA.....................................................................................................................................................................................................................................................................................................................................................................................2211.0010000010
.................CTGGAATACGAAGTCAGGA..............................................................................................................................................................................................................................................................................................................................................................................1911.0011000000
................TCTGGAATACGAAGTCAGGAAAA...........................................................................................................................................................................................................................................................................................................................................................................2311.0010000100
...........TGGGATCTGGAATACGAAGTCAGGAAA............................................................................................................................................................................................................................................................................................................................................................................2711.0011000000
...........TGGGATCTGGAATACGAAGTCAGGA..............................................................................................................................................................................................................................................................................................................................................................................2511.0010000100
..................TGGAATACGAAGTCAGGA..............................................................................................................................................................................................................................................................................................................................................................................1811.0011000000
......AGAAATGGGATCTGGAATACGAA.....................................................................................................................................................................................................................................................................................................................................................................................2311.0010000100
dp5
AAGGCCAGAAATGGGATCTGGAATACGAAGTCAGGAAAAAAGACTGGGAGGTACTGCAC------------CAATTTCAATTTCA-----ATT----ACA-------------------------GTTTCAATTTTCAATTTGTTCTCAA------TC---------------------AATCAA--------TCAATGTCAA----------------AACTCTGAATACA----------------------AAAGAACCAACCAACCAAC----AA-----A-CAA-----------------------A-CAATT-C----AATCACTCC-AGACAGAATGCAACATGCAACAAAAATCAATT------------------AAATCAAATCAAAATCASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
............GGGATCTGGAATACGAAGTC..................................................................................................................................................................................................................................................................................................................................................................................2012.0020200000000
........AAATGGGATCTGGAATACGAAGTCAG................................................................................................................................................................................................................................................................................................................................................................................2611.0010000001000
.............GGATCTGGAATACGAAGTCAG................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
..........ATGGGATCTGGAATACGAAGTCA.................................................................................................................................................................................................................................................................................................................................................................................2311.0010100000000
.....CAGAAATGGGATCTGGAAT..........................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
...........TGGGATCTGGAATACGAAGTCA.................................................................................................................................................................................................................................................................................................................................................................................2211.0010000010000
.........AATGGGATCTGGAATACGAA.....................................................................................................................................................................................................................................................................................................................................................................................2011.0010000001000
.............GGATCTGGAATACGAAGTCAGG...............................................................................................................................................................................................................................................................................................................................................................................2211.0010100000000
.........AATGGGATCTGGAATACG.......................................................................................................................................................................................................................................................................................................................................................................................1811.0010100000000
...........TGGGATCTGGAATACGAA.....................................................................................................................................................................................................................................................................................................................................................................................1811.0010000010000
.......................TACGAAGTCAGGAAAAAAGAC......................................................................................................................................................................................................................................................................................................................................................................2111.0010001000000
......................................AAAGACTGGGAGGTACTGCAC------------C..........................................................................................................................................................................................................................................................................................................................................2211.0010000001000
......AGAAATGGGATCTGGAATAC........................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
........................................AGACTGGGAGGTACTGCAC------------...........................................................................................................................................................................................................................................................................................................................................1911.0010100000000
......AGAAATGGGATCTGGAATA.........................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
AAGGCCAGAAATGGGATC................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000010000
...........TGGGATCTGGAATACGAAGTCAGG...............................................................................................................................................................................................................................................................................................................................................................................2411.0010000010000
.................CTGGAATACGAAGTCAGGAAA............................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
............GGGATCTGGAATACGAAGTCAGGA..............................................................................................................................................................................................................................................................................................................................................................................2411.0010100000000
..........ATGGGATCTGGAATACGAA.....................................................................................................................................................................................................................................................................................................................................................................................1911.0010000001000
...........TGGGATCTGGAATACGAAGTC..................................................................................................................................................................................................................................................................................................................................................................................2111.0010001000000
..........ATGGGATCTGGAATACGAAGTC..................................................................................................................................................................................................................................................................................................................................................................................2211.0010000001000
droPer2
AGGACCAGAAATATGATCTTGAGTATGTTGTTAAGCGCAAGGATGTTGAGGTACACACACGCCACCAGC--TATAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGCTATA-------TACATATATTATATATAACTCTTCTATA------------TATATSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.............................GTTAAGCGCAAGGATGTTGA.................................................................................................................................................................................................................................................................................................................................................................2015.005001004
............................TGTTAAGCGCAAGGATGTTGA.................................................................................................................................................................................................................................................................................................................................................................2112.002002000
........................ATGTTGTTAAGCGCAAGGATGTTGA.................................................................................................................................................................................................................................................................................................................................................................2511.001001000
..........................GTTGTTAAGCGCAAGGATGTTGAG................................................................................................................................................................................................................................................................................................................................................................2411.001000001
..........................GTTGTTAAGCGCAAGGATGTTG..................................................................................................................................................................................................................................................................................................................................................................2211.001000001
..........................GTTGTTAAGCGCAAGGATGTTGA.................................................................................................................................................................................................................................................................................................................................................................2311.001001000
............................TGTTAAGCGCAAGGATGTTGAG................................................................................................................................................................................................................................................................................................................................................................2211.001001000
droWil2
AGGACCAGAAATATGATCTTGAGTATGTTGTTAAGCGCAAGGATGTTGAGGTACACACA------------CAC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.............................GTTAAGCGCAAGGATGTTGA.................................................................................................................................................................................................................................................................................................................................................................20175.00750253200
............................TGTTAAGCGCAAGGATGTTGA.................................................................................................................................................................................................................................................................................................................................................................21152.00520238120
.GGACCAGAAATATGATCTTGAGTATGT......................................................................................................................................................................................................................................................................................................................................................................................2717.00700520
..........................GTTGTTAAGCGCAAGGATGTTGA.................................................................................................................................................................................................................................................................................................................................................................2315.00500500
......................GTATGTTGTTAAGCGCAAGGATGTTGA.................................................................................................................................................................................................................................................................................................................................................................2715.00500050
........................ATGTTGTTAAGCGCAAGGATGTTGA.................................................................................................................................................................................................................................................................................................................................................................2515.00501130
............................TGTTAAGCGCAAGGATGTTGAG................................................................................................................................................................................................................................................................................................................................................................2214.00400310
.............................GTTAAGCGCAAGGATGTTGAG................................................................................................................................................................................................................................................................................................................................................................2114.00401120
............................TGTTAAGCGCAAGGATGTTGAGA...............................................................................................................................................................................................................................................................................................................................................................2313.00301200
..GACCAGAAATATGATCTTGAGTATGTT.....................................................................................................................................................................................................................................................................................................................................................................................2713.00300300
............................TGTTAAGCGCAAGGATGTTG..................................................................................................................................................................................................................................................................................................................................................................2012.00200200
.............................GTTAAGCGCAAGGATGTTG..................................................................................................................................................................................................................................................................................................................................................................1912.00200110
...........................TTGTTAAGCGCAAGGATGTTGA.................................................................................................................................................................................................................................................................................................................................................................2212.00201010
............................TGTTAAGCGCAAGGATGTT...................................................................................................................................................................................................................................................................................................................................................................1911.00100100
.............................GTTAAGCGCAAGGATGTTGAGA...............................................................................................................................................................................................................................................................................................................................................................2211.00100010
.GGACCAGAAATATGATCTTGAGTATGTT.....................................................................................................................................................................................................................................................................................................................................................................................2811.00100100
................TCTTGAGTATGTTGTTAA................................................................................................................................................................................................................................................................................................................................................................................1811.00100010
......AGAAATATGATCTTGAGTATGT......................................................................................................................................................................................................................................................................................................................................................................................2211.00100100
..............................TTAAGCGCAAGGATGTTGAGA...............................................................................................................................................................................................................................................................................................................................................................2111.00100010
................................AAGCGCAAGGATGTTGAG................................................................................................................................................................................................................................................................................................................................................................1811.00100010
......AGAAATATGATCTTGAGTATGTT.....................................................................................................................................................................................................................................................................................................................................................................................2311.00100100
......................GTATGTTGTTAAGCGCAAGGATGTT...................................................................................................................................................................................................................................................................................................................................................................2511.00100010
.......GAAATATGATCTTGAGTATGTTGTT..................................................................................................................................................................................................................................................................................................................................................................................2511.00101000
...........TATGATCTTGAGTATGTTGTTAAGCGC............................................................................................................................................................................................................................................................................................................................................................................2711.00100010
....CCAGAAATATGATCTTGAGTATGTT.....................................................................................................................................................................................................................................................................................................................................................................................2511.00100010
........................ATGTTGTTAAGCGCAAGGATGTTGAG................................................................................................................................................................................................................................................................................................................................................................2611.00100010
.........AATATGATCTTGAGTATGTT.....................................................................................................................................................................................................................................................................................................................................................................................2011.00100100
..........ATATGATCTTGAGTATGTTG....................................................................................................................................................................................................................................................................................................................................................................................2011.00100010
...............................TAAGCGCAAGGATGTTGAG................................................................................................................................................................................................................................................................................................................................................................1911.00100100
.........................TGTTGTTAAGCGCAAGGATGTTGA.................................................................................................................................................................................................................................................................................................................................................................2411.00100010
...............................TAAGCGCAAGGATGTTGA.................................................................................................................................................................................................................................................................................................................................................................1811.00100100
.............................GTTAAGCGCAAGGATGTT...................................................................................................................................................................................................................................................................................................................................................................1811.00100010
droVir3
AGGACCAGAAATATGATCTTGAGTATGTTGTTAAACGCAAGGATGTTGAGGTACACGCA------------CATATCTACTACATAACTATCT----AT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
......................GTATGTTGTTAAACGCAAGGATGTTGA.................................................................................................................................................................................................................................................................................................................................................................2719.009000300000000000000000000010000000000000000000000000000000005000
............................TGTTAAACGCAAGGATGTTGA.................................................................................................................................................................................................................................................................................................................................................................2115.005000000000000000001000000000001000000010000000000000000000002000
.............................GTTAAACGCAAGGATGTTGA.................................................................................................................................................................................................................................................................................................................................................................2015.005000000000000000000000000000002000000000000000000000000000002010
..GACCAGAAATATGATCTTG.............................................................................................................................................................................................................................................................................................................................................................................................1912.002000000000000000000000000000000020000000000000000000000000000000
.......GAAATATGATCTTGAGTATGTT.....................................................................................................................................................................................................................................................................................................................................................................................2211.001000000001000000000000000000000000000000000000000000000000000000
.....CAGAAATATGATCTTGAGTATGTT.....................................................................................................................................................................................................................................................................................................................................................................................2411.001000000000000000000000000000000000000000000000000000000000001000
..........................GTTGTTAAACGCAAGGATGTTGA.................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000000000000000000000000000000000000000000000001000
..............................TTAAACGCAAGGATGTTGA.................................................................................................................................................................................................................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
.GGACCAGAAATATGATCTTGAGTATGTT.....................................................................................................................................................................................................................................................................................................................................................................................2811.001000100000000000000000000000000000000000000000000000000000000000
...........................TTGTTAAACGCAAGGATGTTGA.................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000000000000000000000000000000000000000000000001000
............ATGATCTTGAGTATGTTGTTAAA...............................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000000000010000000000000000000000000000000000000000
..GACCAGAAATATGATCTTGAGT..........................................................................................................................................................................................................................................................................................................................................................................................2211.001000100000000000000000000000000000000000000000000000000000000000
.......GAAATATGATCTTGAGTATGT......................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000001000000000000000000000000000000000
...............................TAAACGCAAGGATGTTGAG................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000100000000000000000000000000000000000000000000000
......................GTATGTTGTTAAACGCAAGGATGTTGAG................................................................................................................................................................................................................................................................................................................................................................2811.001000100000000000000000000000000000000000000000000000000000000000
...........TATGATCTTGAGTATGTTG....................................................................................................................................................................................................................................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
............................TGTTAAACGCAAGGATGTT...................................................................................................................................................................................................................................................................................................................................................................1911.001000100000000000000000000000000000000000000000000000000000000000
............................TGTTAAACGCAAGGATGTTG..................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000000000000000000000000000000001000
..GACCAGAAATATGATCTTGAGTATGTT.....................................................................................................................................................................................................................................................................................................................................................................................2711.001000000000000000001000000000000000000000000000000000000000000000
............................TGTTAAACGCAAGGATGT....................................................................................................................................................................................................................................................................................................................................................................1811.001000000000000000000000100000000000000000000000000000000000000000
.GGACCAGAAATATGATCTTGAGTATGT......................................................................................................................................................................................................................................................................................................................................................................................2711.001000000000000000100000000000000000000000000000000000000000000000
......................GTATGTTGTTAAACGCAAGG........................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000001000000000000000000000000000000000000000000000000
...ACCAGAAATATGATCTTGAGTATG.......................................................................................................................................................................................................................................................................................................................................................................................2411.001000000000000000000000000000010000000000000000000000000000000000
droMoj3
AGGACCAGAAATATGATCTTGAGTATGTTGTTAAACGCAAGGATGTTGAGGTACACGCA------------CATATCTACTACATAACTATCT----AT----------------------------------CTAC------CTATCTA------TC---------------------TATCTA--------TCTATTT---------------------------------------------------------------------------------------------------------------------------------------ATCCTGCGATCCACA-------TCATAAT-TT-----------------------------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
............................TGTTAAACGCAAGGATGTTGA.................................................................................................................................................................................................................................................................................................................................................................2118.008420002
.............................GTTAAACGCAAGGATGTTGA.................................................................................................................................................................................................................................................................................................................................................................2016.006000114
..........................GTTGTTAAACGCAAGGATGTTGA.................................................................................................................................................................................................................................................................................................................................................................2314.004100003
.......GAAATATGATCTTGAGTATGTT.....................................................................................................................................................................................................................................................................................................................................................................................2214.004000004
.......GAAATATGATCTTGAGTATGT......................................................................................................................................................................................................................................................................................................................................................................................2114.004300001
.............................GTTAAACGCAAGGATGTTGAG................................................................................................................................................................................................................................................................................................................................................................2112.002100001
............................TGTTAAACGCAAGGATGTT...................................................................................................................................................................................................................................................................................................................................................................1911.001100000
...ACCAGAAATATGATCTTGAGTATGT......................................................................................................................................................................................................................................................................................................................................................................................2511.001100000
.........AATATGATCTTGAGTATGT......................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
.....................AGTATGTTGTTAAACGCAAGGATGT....................................................................................................................................................................................................................................................................................................................................................................2511.001000010
........AAATATGATCTTGAGTAT........................................................................................................................................................................................................................................................................................................................................................................................1811.001100000
..................TTGAGTATGTTGTTAAACGCAAGGATGT....................................................................................................................................................................................................................................................................................................................................................................2811.001100000
........................ATGTTGTTAAACGCAAGGATGTTGAG................................................................................................................................................................................................................................................................................................................................................................2611.001100000
......................GTATGTTGTTAAACGCAAGGATGTTGA.................................................................................................................................................................................................................................................................................................................................................................2711.001000001
.......GAAATATGATCTTGAGTATGTTGTT..................................................................................................................................................................................................................................................................................................................................................................................2511.001100000
droGri2
AGGACCAGAAATATGATCTTGAGTATGTTGTTAAACGCAAGGATGTTGAGGTACACGCA------------CATATCTACTAAATAACTATCT----ATCTATCTATCTATTATAAAATATCCAA------ATGCCTAT--------CTA--TCTATTAGCTATT-ATCTGCCAAAAAG---CGTTCCAATTATCAAAATCAAAAGTCTAAAACAACTTAATGCTT------------------------------------------------------------------------------------------------------------------------AACA-------A--------------------------------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
................................AAACGCAAGGATGTTGAG................................................................................................................................................................................................................................................................................................................................................................1811.00110

Generated: 05/18/2015 at 04:10 AM