ID:

dan_2129

 Coordinate:

scaffold_13266:19515353-19515503 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-12.0 -11.4 -11.4

Flybase annnotation

CDS [Dana\GF11022-cds]; exon [dana_GLEANR_11089:4]; intron [Dana\GF11022-in]

No Repeatable elements found

mature
  1. dan_2129  scaffold_13266:19515468-19515492 -
  2. scaffold_13266:19637515-19637539 -
star
  1. scaffold_7452:594-614 -
  2. scaffold_8977:755-775 -
  3. scaffold_12586:560857-560877 +
  4. dan_2129  scaffold_13266:19515436-19515456 -
  5. scaffold_13266:19634473-19634493 -
  6. scaffold_13266:19637483-19637503 -
  7. scaffold_13335:3024142-3024162 +
  8. scaffold_13499:1286563-1286583 +

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
ACTCTGGGGGACCGGCCGACCCCTCAGTTTCAATCAGGCTTATCATGATAAGCGGGCTATGTCATGATGGACGAACCCCTCCCCGGCTACTCGTGGGTCCAAACATGAATTCTAGAAACAACACAAACAAAAATAGTGGAGAACGGAACTCCCCAAGAAAGTCCGTAAATGGGATCATGGATCCGTCAATCTCCAAGGCAGATAAAGGCCAAAGAGATGCTGGGATGGCGAAGCTCCCCACTGAGGGGCAA
*************************************************************(((((.((((.........((((((....))).)))))))..)))))..........************************************************************************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total M044
female body
 M058
embryo
 V106
head
 V105
male body
............................................................................................................................................................................................................AAGGCCAAAGAGATGCTGGGATGG....................... 24 0 4 1.00 4 3 1 0 0
.............................................................TCATGATGGACGAACCCCTCCCCGG..................................................................................................................................................................... 25 0 2 1.00 2 2 0 0 0
.............................................................TCATGATGGACGAACCCCTCCCCGGC.................................................................................................................................................................... 26 0 2 0.50 1 1 0 0 0
.................................................................GATGGACGAACCCCTCCCCGG..................................................................................................................................................................... 21 0 2 0.50 1 1 0 0 0
..............................................................CATGATGGACGAACCCCTCCCCGG..................................................................................................................................................................... 24 0 2 0.50 1 1 0 0 0
..................................................................ATGGACGAACCCCTCCCCGGCTA.................................................................................................................................................................. 23 0 2 0.50 1 1 0 0 0
............................................................GTCATGATGGACGAACCCCTCCCCGG..................................................................................................................................................................... 26 0 2 0.50 1 1 0 0 0
...............................................................................................................................................................................................................GCCAAAGAGATGCTGGGATGGC...................... 22 0 20 0.30 6 0 6 0 0
............................................................................................................................................................................................................AAGGCCAAAGAGATGCTGGGATG........................ 23 0 4 0.25 1 1 0 0 0
...........................................................TTTCATGATGGACGAACCCCTCC......................................................................................................................................................................... 23 1 4 0.25 1 0 1 0 0
............................................................................................................................................................................................................AAGGCCAAAGAGATGCTGGGATGGC...................... 25 0 4 0.25 1 1 0 0 0
................................................................................................................................................................................................CCAAGGCAGATAAAGGCCAAAG..................................... 22 0 5 0.20 1 0 1 0 0
.....................................................................................................................................................................................TCCGTCAATCTCCAAGGCAGATAA.............................................. 24 0 5 0.20 1 0 1 0 0
...................................................................................................................................................................................GATCCGTCAATCTCCAAGGCAGATAAAA............................................ 28 1 7 0.14 1 1 0 0 0
.................................................................................................TCCAAACATGAATTCTAGAAA..................................................................................................................................... 21 0 8 0.13 1 1 0 0 0
..................................................................................................CCAAACATGAATTCTAGAAACAACACAAA............................................................................................................................ 29 0 8 0.13 1 1 0 0 0
............................................................................................................................................................................................................AAGGCCAAAGAGATGCTGGGATGGT...................... 25 1 8 0.13 1 1 0 0 0
..................................................................................................CCAAACATGAATTCTAGAAACAACAC............................................................................................................................... 26 0 8 0.13 1 1 0 0 0
.........................................................................................................................................................CAAGAAAGTCCGTAAATGGG.............................................................................. 20 0 20 0.10 2 0 0 2 0
......................................................................................................................................................CCCCAAGAAAGTCCGTAAATGG............................................................................... 22 0 20 0.10 2 2 0 0 0
...............................................................................................................CTAGAAACAACACAAACAGA........................................................................................................................ 20 1 10 0.10 1 0 1 0 0
.....................CCTCAGTTTCAATCAGGCTTA................................................................................................................................................................................................................. 21 0 20 0.10 2 0 0 2 0
................................................................................................................................................................................................................................ATGGCGAAGCTCCCCACTGAG...... 21 0 20 0.05 1 0 0 1 0
..................................CAGGCTTATCATGATAAGCGGGCTT................................................................................................................................................................................................ 25 1 20 0.05 1 0 1 0 0
....................................................................................................................................................CTCCCCAAGAAAGTCCGTAAATGGG.............................................................................. 25 0 20 0.05 1 1 0 0 0
......................................................................................................................................................CCCCAAGAAAGTCCGTAAATGGG.............................................................................. 23 0 20 0.05 1 1 0 0 0
..................................CAGGCTTATCATGATAAGCGGGCTATG.............................................................................................................................................................................................. 27 0 20 0.05 1 1 0 0 0
..................................................................................................................................................................................................................AAAGAGATGCTGGGATGGCGAA................... 22 0 20 0.05 1 0 1 0 0
........................................TGTCATGATAAGCGGGCTATG.............................................................................................................................................................................................. 21 1 20 0.05 1 0 0 0 1
......................................................................................................................................................CCCCAAGACAGTGCGTAAATGGGAT............................................................................ 25 2 20 0.05 1 1 0 0 0
........................................................CTATGTCATGATGGACGAACCCCT........................................................................................................................................................................... 24 0 20 0.05 1 1 0 0 0
.....................................................................................................................................................TCCCCAAGAAAGTCCGTAAATGG............................................................................... 23 0 20 0.05 1 1 0 0 0
........................................................................................................................................................CCAAGAAAGTCCGTAAATGGG.............................................................................. 21 0 20 0.05 1 0 0 0 1
.......................................................................................................................................................CCCAAGAAAGTCCGTAAATGGGATCA.......................................................................... 26 0 20 0.05 1 1 0 0 0
......................................................................................................................................................CCCCAAGAAAGTCCGTAAATGGGATCAT......................................................................... 28 0 20 0.05 1 1 0 0 0
.................GACCCCTCAGTTTCAATCAGGCTTATCAT............................................................................................................................................................................................................. 29 0 20 0.05 1 1 0 0 0
.................................................................................................................................................................................TGGATCCGTCAATCTCCAAGGCAGATA............................................... 27 0 20 0.05 1 1 0 0 0
................................................TAAGCGGGCTATGTCGTGATGGACGAA................................................................................................................................................................................ 27 1 20 0.05 1 0 1 0 0
.....................................................................................................................................................TCCCCAAGAAAGTCCGTAAATGGGATC........................................................................... 27 0 20 0.05 1 1 0 0 0
.........................................................................................................................................................CAAGAAAGTCCGTAAATGGGATCATGGA...................................................................... 28 0 20 0.05 1 1 0 0 0
ACTCTGGGGGACCGGCCGACCC..................................................................................................................................................................................................................................... 22 0 20 0.05 1 1 0 0 0
.....................................................................................................................................................TCCCCAAGAAAGTCCGTAAATGGGAT............................................................................ 26 0 20 0.05 1 1 0 0 0
.......................................................................................................................................................................................CGTCAATCTCCAAGGCAGAT................................................ 20 0 20 0.05 1 1 0 0 0
......................................................................................................................................................CCACAAGAAAGTCCGTAAATGGGATC........................................................................... 26 1 20 0.05 1 0 1 0 0
.....................................................................................................................................................TCCCCAAGAAAGTCCGTAAATGGG.............................................................................. 24 0 20 0.05 1 1 0 0 0
..................................................................................................................GAAACAACACAAGCAAACA...................................................................................................................... 19 2 20 0.05 1 0 1 0 0
.............................................................................................................................................................................ATCATGGATCCGTCAATCTCC......................................................... 21 0 20 0.05 1 0 0 0 1
...........................................................................................................................................................GGAGGGTCCGTAAATGGGATC........................................................................... 21 3 20 0.05 1 0 0 0 1
...................................................................................................................................................................................GGTCCGTCAATCTCCAAGGCAGAT................................................ 24 1 20 0.05 1 0 1 0 0
........................................TATCATGATAAGCGGGCTATGC............................................................................................................................................................................................. 22 1 20 0.05 1 0 1 0 0
............................................ATGATAAGCGGGCTATGTCA........................................................................................................................................................................................... 20 0 20 0.05 1 1 0 0 0
......................................CTTATCATGATAAGCGGGCTATGC............................................................................................................................................................................................. 24 1 20 0.05 1 0 1 0 0
..........ACCGGCCGACCCCTCAGTTT............................................................................................................................................................................................................................. 20 0 20 0.05 1 1 0 0 0
......................................................................................................................................................CCCCAAGAAAGTCCGTAAATGGGAT............................................................................ 25 0 20 0.05 1 1 0 0 0
.........................................................................................................................................................CAAGAAAGACCGTAAATGGGATCATG........................................................................ 26 1 20 0.05 1 1 0 0 0

Anti-sense strand reads

TGAGACCCCCTGGCCGGCTGGGGAGTCAAAGTTAGTCCGAATAGTACTATTCGCCCGATACAGTACTACCTGCTTGGGGAGGGGCCGATGAGCACCCAGGTTTGTACTTAAGATCTTTGTTGTGTTTGTTTTTATCACCTCTTGCCTTGAGGGGTTCTTTCAGGCATTTACCCTAGTACCTAGGCAGTTAGAGGTTCCGTCTATTTCCGGTTTCTCTACGACCCTACCGCTTCGAGGGGTGACTCCCCGTT
*************************************************************************************************************************************(((((.((((.........((((((....))).)))))))..)))))..........************************************************************* 		Read size # Mismatch Hit Count Total Norm Total M044
female body
 M058
embryo
 V039
embryo
 V055
head
 V105
male body		 V106
head
.....................GGAGTCAAAGTTAGTCCGAAT................................................................................................................................................................................................................. 21 0 20 1.45 29 4 0 24 0 1 0
.............................................................................................................................................................................................AGAGGTTCCGTCTATTTCCGGTTTC..................................... 25 0 5 1.40 7 7 0 0 0 0 0
..................................................TCGCCCGATACAGTACTACCTGCTT................................................................................................................................................................................ 25 0 20 1.20 24 21 0 3 0 0 0
..........................................................................................................................................CTCTTGCCTTGAGGGGTTCTTTCAG........................................................................................ 25 0 20 0.95 19 0 17 2 0 0 0
............................................................................................................................................................................................TAGAGGTTCCGTCTATTTCCGGTTTC..................................... 26 0 5 0.80 4 3 1 0 0 0 0
.........................TCAAAGTTAGTCCGAATAGTACTAT......................................................................................................................................................................................................... 25 0 20 0.70 14 0 14 0 0 0 0
...............................................................................................................................................................................................AGGTTCCGTCTATTTCCGGTTTCTCT.................................. 26 0 5 0.60 3 3 0 0 0 0 0
...........GGCCGGCTGGGGAGTCAAAGTTAGT....................................................................................................................................................................................................................... 25 0 20 0.55 11 11 0 0 0 0 0
......................GAGTCAAAGTTAGTCCGAATAGTACTAT......................................................................................................................................................................................................... 28 0 20 0.50 10 10 0 0 0 0 0
.....................GGAGTCAAAGTTAGTCCGAATAGTACT........................................................................................................................................................................................................... 27 0 20 0.50 10 0 4 6 0 0 0
......................................................................TGCTTGGGGAGGGGCCGATGAG............................................................................................................................................................... 22 0 2 0.50 1 1 0 0 0 0 0
.........................................................................................................................................CCTCTTGCCTTGAGGGGTTCTTT........................................................................................... 23 0 20 0.50 10 0 8 2 0 0 0
..............CGGCTGGGGAGTCAAAGTTAGT....................................................................................................................................................................................................................... 22 0 20 0.50 10 1 9 0 0 0 0
.............................................................................................................................................................................................AGAGGTTCCGTCTATTTCCGGTTT...................................... 24 0 5 0.40 2 2 0 0 0 0 0
...............................................................................................................................................................................................AGGTTCCGTCTATTTCCGGTTTC..................................... 23 0 5 0.40 2 2 0 0 0 0 0
.................CTGGGGAGTCAAAGTTAGTCCGAAT................................................................................................................................................................................................................. 25 0 20 0.35 7 0 6 1 0 0 0
..................................................................................................................................................................................CCTAGGCAGTTAGAGGTTCCGTCTAT............................................... 26 0 20 0.35 7 7 0 0 0 0 0
....................................................................................CCTATGAGCACCCAGGTTTGTACTTA............................................................................................................................................. 26 1 3 0.33 1 1 0 0 0 0 0
..................................................................................GGCCGATGAGCACCCAGGTTTGT.................................................................................................................................................. 23 0 3 0.33 1 1 0 0 0 0 0
.....................................................................................CGATGAGCACCCAGGTTTGT.................................................................................................................................................. 20 0 3 0.33 1 1 0 0 0 0 0
.....................................................................................CGATGAGCACCCAGGTTTGTACTTAA............................................................................................................................................ 26 0 3 0.33 1 0 1 0 0 0 0
..................................................................................GGCCGATGAGCACCCAGGTTTGTACT............................................................................................................................................... 26 0 3 0.33 1 1 0 0 0 0 0
...................................................................................GCCGATGAGCACCCAGGTTTGTACT............................................................................................................................................... 25 0 3 0.33 1 1 0 0 0 0 0
.........................................................................................GAGCACCCAGGTTTGTACTTAAGAT......................................................................................................................................... 25 0 7 0.29 2 1 1 0 0 0 0
........................................................................................TGAGCACCCAGGTTTGTACTTAAGAT......................................................................................................................................... 26 0 7 0.29 2 2 0 0 0 0 0
............................................................................................CACCCAGGTTTGTACTTAAGATCTTTGT................................................................................................................................... 28 0 8 0.25 2 1 1 0 0 0 0
.........................................................ATACAGTACTACCTGCTTGGGGAGG......................................................................................................................................................................... 25 0 4 0.25 1 0 1 0 0 0 0
........................................................................................................................................................................................................CTATTTCCGGTTTCTCTACGACCCTAC........................ 27 0 4 0.25 1 1 0 0 0 0 0
...............................................................................................CCAGGTTTGTACTTAAGATCTTTGTT.................................................................................................................................. 26 0 8 0.25 2 1 1 0 0 0 0
.............CCGGCTGGGGAGTCAAAGTTAGT....................................................................................................................................................................................................................... 23 0 20 0.25 5 0 5 0 0 0 0
................................................ATTCGCCCGATACAGTACTACCTGCTT................................................................................................................................................................................ 27 0 20 0.25 5 5 0 0 0 0 0
..........................................................................................................................................CTCTTGCCTTGAGGGGTTCTTT........................................................................................... 22 0 20 0.25 5 0 4 0 1 0 0
......................................................................TGCTTGGGGAGGAGGCGA................................................................................................................................................................... 18 2 4 0.25 1 0 0 0 1 0 0
............................................................................................................................................................................................TAGAGGTTCCGTCTATTTCCGGTTT...................................... 25 0 5 0.20 1 1 0 0 0 0 0
.............CCGGCTGGGGAGTCAAAGTTAGTCCG.................................................................................................................................................................................................................... 26 0 20 0.20 4 4 0 0 0 0 0
.................................................................................................................................................................................ACCTAGGCAGTTAGAGGTTCCGTCTATTT............................................. 29 0 5 0.20 1 1 0 0 0 0 0
........CCTGGCCGGCTGGGGAGTCAAAGTT.......................................................................................................................................................................................................................... 25 0 20 0.20 4 0 4 0 0 0 0
.......................................................................................................................................CACCTCTTGCCTTGAGGGGTTCTTT........................................................................................... 25 0 20 0.20 4 4 0 0 0 0 0
...................................................................................................................................................................................................CCCGTCTATTTCCGGTTTCTCT.................................. 22 1 5 0.20 1 0 1 0 0 0 0
..........TGGCCGGCTGGGGAGTCAAAGTTAGT....................................................................................................................................................................................................................... 26 0 20 0.20 4 1 3 0 0 0 0
......................................................................................................................................CCACCTCTTGCCTTGAGGGGTTCTTT........................................................................................... 26 1 20 0.20 4 0 4 0 0 0 0
..............CGGCTGGGGAGTCAAAGTTAGTCCGAAT................................................................................................................................................................................................................. 28 0 20 0.20 4 3 0 1 0 0 0
...............................................................................................................................................................................................AGGTTCCGTCTATTTCCGGTTT...................................... 22 0 5 0.20 1 1 0 0 0 0 0
............................................................................................................................................................................................TAGAGGTTCCGTCTATTGCCGGTTTC..................................... 26 1 5 0.20 1 1 0 0 0 0 0
....................GGGAGTCAAAGTTAGTCCGAATAG............................................................................................................................................................................................................... 24 0 20 0.20 4 2 0 2 0 0 0
................................................................................................................................................................................................GGTTCCGTCTATTTCCAGTTTCTCT.................................. 25 1 6 0.17 1 1 0 0 0 0 0
..................TGGGGAGTCAAAGTTAGTCCGAAT................................................................................................................................................................................................................. 24 0 20 0.15 3 0 3 0 0 0 0
......................................GAATAGTACTATTCGCCCGATACAGT........................................................................................................................................................................................... 26 0 20 0.15 3 2 0 1 0 0 0
.....................................................................................................................................................................................AGGCAGTTAGAGGTTCCGTCTAT............................................... 23 0 20 0.15 3 0 3 0 0 0 0
...........................................................................................................................................................................CCTAGTACCTAGGCAGTTAGAGGTT....................................................... 25 0 20 0.15 3 1 2 0 0 0 0
.........CTGGCCGGCTGGGGAGTCAAAGTT.......................................................................................................................................................................................................................... 24 0 20 0.15 3 0 3 0 0 0 0
......................................................CCGATACAGTACTACCTGCTTGGGGA........................................................................................................................................................................... 26 0 20 0.15 3 0 3 0 0 0 0
...................................................CGCCCGATACAGTACTACCTGCTT................................................................................................................................................................................ 24 0 20 0.15 3 0 0 3 0 0 0
...................GGGGAGTCAAAGTTAGTCCGAATAG............................................................................................................................................................................................................... 25 0 20 0.15 3 2 1 0 0 0 0
.......................................................................................ATGAGCACCCAGGTTTGTACTTAAGAT......................................................................................................................................... 27 0 7 0.14 1 0 1 0 0 0 0
.......................................................................GTTTGGGGAGGGGGCGAT.................................................................................................................................................................. 18 2 7 0.14 1 0 0 0 1 0 0
...............................................................................................CCAGGTTTGTACTTAAGATCTTTGGT.................................................................................................................................. 26 1 8 0.13 1 0 1 0 0 0 0
............................................................................................CACCCAGGTTTGTACTTAAGATCTT...................................................................................................................................... 25 0 8 0.13 1 0 1 0 0 0 0
.............................................................................................ACCCAGGTTTGTACTTAAGATCTTTTT................................................................................................................................... 27 1 8 0.13 1 0 1 0 0 0 0
............................................................................................CACCCAGGTTTGTACTTAAGATCTTT..................................................................................................................................... 26 0 8 0.13 1 0 1 0 0 0 0
......................................................................................................TGTACTTAAGATCTTTGTTGTGTTTGT.......................................................................................................................... 27 0 8 0.13 1 1 0 0 0 0 0
................................................................................................................................................................CAGGCATTTACCCTAGTACCTAGGCAGTT.............................................................. 29 0 18 0.11 2 2 0 0 0 0 0
.............................................................................................................................................................................................AGAGGTTCCGTCTATTTCCGGTTTT..................................... 25 1 9 0.11 1 0 1 0 0 0 0
.................................................................................................................................................................AGGCATTTACCCTAGTACCTAGGCAGT............................................................... 27 0 18 0.11 2 2 0 0 0 0 0
......................................................................CGCTTGGGGAGGGGCTGATAA................................................................................................................................................................ 21 3 9 0.11 1 0 0 0 1 0 0
...............................................................................................................................................................TCAGGCATTTACCCTAGTACCTAGGCAGT............................................................... 29 0 18 0.11 2 2 0 0 0 0 0
..................................................................................................................................................................GGCATTTACCCTAGTACCTAGGCAGT............................................................... 26 0 18 0.11 2 2 0 0 0 0 0
....................GGGAGTCAAAGTTAGTCCGAAT................................................................................................................................................................................................................. 22 0 20 0.10 2 0 2 0 0 0 0
..........................................................................................................................................................................................................................CGACCCTACCGCTTCGAGGGGTGACT....... 26 0 20 0.10 2 0 2 0 0 0 0
....................................CCGAATAGTACTATTCGCCCGATACA............................................................................................................................................................................................. 26 0 20 0.10 2 0 2 0 0 0 0
...........GGCCGGCTGGGGAGTCAAAGT........................................................................................................................................................................................................................... 21 0 20 0.10 2 2 0 0 0 0 0
...........................................................................................................................................TCTTGCCTTGAGGGGTTCTTTCAG........................................................................................ 24 0 20 0.10 2 1 1 0 0 0 0
....................GGGAGTCAAAGTTAGTCCGAATAGT.............................................................................................................................................................................................................. 25 0 20 0.10 2 0 1 1 0 0 0
...................................................................................................................................................TGAGGGGTTCTTTCAGGCATT................................................................................... 21 0 20 0.10 2 0 0 0 0 0 2
..............................................................................................................................................................TTCAGGCATTTACCCTAGTACCTAGG................................................................... 26 0 20 0.10 2 1 1 0 0 0 0
.............CCGGCTGGGGAGTCAAAGTTAGTCCGAAT................................................................................................................................................................................................................. 29 0 20 0.10 2 0 2 0 0 0 0
...........GGCCGGCTGGGGAGTCAAAGTT.......................................................................................................................................................................................................................... 22 0 20 0.10 2 2 0 0 0 0 0
.................................................................................................................................................................................................................................ACCGCTTCGAGGGGTGACTC...... 20 0 20 0.10 2 0 0 0 0 2 0
.......................................................................................................................................CACCTCTTGCCTTGAGGGGTTCTTTCAG........................................................................................ 28 0 20 0.10 2 0 2 0 0 0 0
..................................................TCGCCCGATACAGTACTACCTGCGT................................................................................................................................................................................ 25 1 20 0.10 2 0 2 0 0 0 0
...................GGGGAGTCAAAGTTAGTCCGAAT................................................................................................................................................................................................................. 23 0 20 0.10 2 0 0 2 0 0 0
....................GGGAGTCAAAGTTAGTCCGAATAGTA............................................................................................................................................................................................................. 26 0 20 0.10 2 0 0 2 0 0 0
..........TGGCCGGCTGGGGAGTCAAAGTT.......................................................................................................................................................................................................................... 23 0 20 0.10 2 0 2 0 0 0 0
.........................................................................................................................................CCTCTTGCCTTGAGGGGTTCTTTCGG........................................................................................ 26 1 20 0.10 2 0 2 0 0 0 0
...................................TCCGAATAGTACTATTCGCCCGATAC.............................................................................................................................................................................................. 26 0 20 0.10 2 0 2 0 0 0 0
..................................................................................................TGATTGTACTTACGATCTTTG.................................................................................................................................... 21 3 11 0.09 1 1 0 0 0 0 0
......................................................................TGCTTGGGGAGGGGGTGA................................................................................................................................................................... 18 2 12 0.08 1 0 0 0 1 0 0
...........................................................................................................TTAAGCTCTTTTATGTGTTTGTTTT....................................................................................................................... 25 3 14 0.07 1 0 0 1 0 0 0
........................................................................................TGAGCACCCAGGTTTATACTTAAGAC......................................................................................................................................... 26 2 17 0.06 1 0 1 0 0 0 0
..........................................................................................................................................CTCTTGCCTTGAGGGGTTCTTTCTAGCA..................................................................................... 28 2 17 0.06 1 0 1 0 0 0 0
.......................................................................................ATGAGCACCCAGGTTTCTACTTAAGGT......................................................................................................................................... 27 2 18 0.06 1 0 1 0 0 0 0
...............................................................................................................................................................TCAGGCATTTACCCTAGTACCTAGGCAG................................................................ 28 0 19 0.05 1 1 0 0 0 0 0
.................................................................................................................................................................AGGCATTTACCCTAGTACCTAGGCA................................................................. 25 0 19 0.05 1 1 0 0 0 0 0
.....................................................................................................................................................................ATTTACCCCAGTACCTAGGCAGTT.............................................................. 24 1 19 0.05 1 0 1 0 0 0 0
..............................................................................................................................................................TTCAGGCATTTACCCTAGTACCTAGGCA................................................................. 28 0 19 0.05 1 1 0 0 0 0 0
................................................................................................................................................................CAGGCATTTACCCTAGTAGCTAGGCAG................................................................ 27 1 19 0.05 1 1 0 0 0 0 0
............................................................................................................................................CTTGCCTTGCGGGGTTCTTT........................................................................................... 20 1 20 0.05 1 0 1 0 0 0 0
......CCCCTGGCCGGCTGGGGAGTCAAAGTT.......................................................................................................................................................................................................................... 27 0 20 0.05 1 0 1 0 0 0 0
................................................................................................................................................................................................................GGTTTCTCTACGACCCTACCGCT.................... 23 0 20 0.05 1 1 0 0 0 0 0
..................TGGGGAGTCAAAGTTAGTCCGAAA................................................................................................................................................................................................................. 24 1 20 0.05 1 0 1 0 0 0 0
.....................GGAGTCAAATTTAGTCCGAAT................................................................................................................................................................................................................. 21 1 20 0.05 1 0 0 1 0 0 0
.................................................ATCGCCCGATACAGTACTACCTGCTT................................................................................................................................................................................ 26 1 20 0.05 1 1 0 0 0 0 0
..........TGGCCGGCTGGGGAGTCAAAGTTAG........................................................................................................................................................................................................................ 25 0 20 0.05 1 0 1 0 0 0 0
.........CTGGCCGGCTGGGGAGTCAAAGT........................................................................................................................................................................................................................... 23 0 20 0.05 1 1 0 0 0 0 0
...............GGCTGGGGAGTCAAAGTTAGTCC..................................................................................................................................................................................................................... 23 0 20 0.05 1 0 1 0 0 0 0
................................................................................................................................................................CAGGCATTTACCCTAGTACC....................................................................... 20 0 20 0.05 1 0 0 0 0 0 1
...................................................CGCCCGATACAGTACGACCTGCTT................................................................................................................................................................................ 24 1 20 0.05 1 1 0 0 0 0 0
.......CCCTGGCCGGCTGGGGAGTC................................................................................................................................................................................................................................ 20 0 20 0.05 1 0 0 0 0 0 1
....ACCCCCTGGCCGGCTGGGGAGTCAAAGT........................................................................................................................................................................................................................... 28 0 20 0.05 1 1 0 0 0 0 0
................................................................................................................................................................................................................GGTTTCTCTACGACCGTACCGCTT................... 24 1 20 0.05 1 1 0 0 0 0 0
..........................CAAAGTTAGTCCGAATAGTACTAT......................................................................................................................................................................................................... 24 0 20 0.05 1 0 1 0 0 0 0
...................................TCCGAATAGTACTATTCGCCCGAT................................................................................................................................................................................................ 24 0 20 0.05 1 0 1 0 0 0 0
.....................GGACTCAAAGTTAGTCCGAAT................................................................................................................................................................................................................. 21 1 20 0.05 1 0 0 1 0 0 0
.....................GGAGTCAAAGTTAGTCCGAATAGTACTA.......................................................................................................................................................................................................... 28 0 20 0.05 1 0 0 1 0 0 0
.....................GGAGTCAAAGTTAGTCCGAATA................................................................................................................................................................................................................ 22 0 20 0.05 1 0 0 1 0 0 0
..........................................................................................................................................CTCTTGCCTTGAGGGGTTCTTCCAG........................................................................................ 25 1 20 0.05 1 0 1 0 0 0 0
....................................................................................................................................................GAGGGGTTCTTTCAGGCATTTAC................................................................................ 23 0 20 0.05 1 0 1 0 0 0 0
.....................GGAGTCAAAGTGAGTCCGAAT................................................................................................................................................................................................................. 21 1 20 0.05 1 0 0 1 0 0 0
..................................GTCCGAATAGTACTATTCGCCCGATAC.............................................................................................................................................................................................. 27 0 20 0.05 1 0 1 0 0 0 0
..........................................................................................................................................CTCTTGCCTGGAGAGGTTCTTTCAG........................................................................................ 25 2 20 0.05 1 0 0 1 0 0 0
......................GAGTCAAAGTTAGTCCGAATAGTAC............................................................................................................................................................................................................ 25 0 20 0.05 1 0 0 1 0 0 0
.....................GGAGTCAAAGTTAGTCCGAATAGTA............................................................................................................................................................................................................. 25 0 20 0.05 1 1 0 0 0 0 0
................................................................................................................................................................................................................................TACCGCTTCGAGGGGTGACTCC..... 22 0 20 0.05 1 1 0 0 0 0 0
..................................GTCCGAATAGTACTATTCGCCCGAT................................................................................................................................................................................................ 25 0 20 0.05 1 1 0 0 0 0 0
....................................................................................................................................................................................TAGGCAGTTAGAGGTTCCGTCTAT............................................... 24 0 20 0.05 1 0 0 1 0 0 0
........................GTCAAAGTTAGTCCGAAAAGTACTAT......................................................................................................................................................................................................... 26 1 20 0.05 1 1 0 0 0 0 0
......................GAGTCAAAGTTAGTCCGAAGAGTACTAT......................................................................................................................................................................................................... 28 1 20 0.05 1 1 0 0 0 0 0
....................GGGAGTCAAAGTTGGTCCGAAT................................................................................................................................................................................................................. 22 1 20 0.05 1 1 0 0 0 0 0
.......................................................................................................................................CACCTCTTGCCTTGAGGGGTTCGTTCAG........................................................................................ 28 1 20 0.05 1 0 1 0 0 0 0
....................................CCGAATAGTACTATTCGCCCGAT................................................................................................................................................................................................ 23 0 20 0.05 1 0 1 0 0 0 0
........CCTGGCCGGATGGGGAGTCAAAGT........................................................................................................................................................................................................................... 24 1 20 0.05 1 0 1 0 0 0 0
...............................................................................................................................................................................GTACCTAGGCAGTTAGAGGTTCCGTCT................................................. 27 0 20 0.05 1 1 0 0 0 0 0
.....................GGATTCAAAGTTAGTCCGAAT................................................................................................................................................................................................................. 21 1 20 0.05 1 0 0 1 0 0 0
..............................................CTATTCGCCCGATACAGTACTAC...................................................................................................................................................................................... 23 0 20 0.05 1 1 0 0 0 0 0
................................................................................................................................................CCTTGAGGGGTTCTTTCAG........................................................................................ 19 0 20 0.05 1 0 0 1 0 0 0
...........................................................................................................................................TCTTGCCTTGAGGGGTTCTTT........................................................................................... 21 0 20 0.05 1 1 0 0 0 0 0
.....................GCAGTCAAAGTTAGTCCCAAT................................................................................................................................................................................................................. 21 2 20 0.05 1 0 0 1 0 0 0
........................GTCAAAGTTAGTCCGAAGAGTACTAT......................................................................................................................................................................................................... 26 1 20 0.05 1 1 0 0 0 0 0
..........................................AGTACCATTCGCCCGATACAGTAC......................................................................................................................................................................................... 24 1 20 0.05 1 1 0 0 0 0 0
.....................GGAGACAAAGTTAGTCCGAATAGTACTA.......................................................................................................................................................................................................... 28 1 20 0.05 1 1 0 0 0 0 0
.....................GGAGTCAAATTTAGTCCGAATAG............................................................................................................................................................................................................... 23 1 20 0.05 1 0 0 1 0 0 0
..........................................................................................................................................CTCTTGCCTTTATGGGTTCTTTCAT........................................................................................ 25 3 20 0.05 1 0 0 1 0 0 0
.....................GGAGTCCAAGTTAGTCCGAAT................................................................................................................................................................................................................. 21 1 20 0.05 1 0 0 1 0 0 0
....................................CCGAATAGTACTATTCGCCCGATACAGT........................................................................................................................................................................................... 28 0 20 0.05 1 0 1 0 0 0 0
..........................................................................................................................................................................................................................CGACCCTACCGCTTCGAGGGGTGACTC...... 27 0 20 0.05 1 0 0 0 0 1 0
........................................................................................................................................................................TACCCTAGTACCTAGGCAGTTAGAG.......................................................... 25 0 20 0.05 1 0 1 0 0 0 0
......................................................CCGATACAGTACTACCTGC.................................................................................................................................................................................. 19 0 20 0.05 1 1 0 0 0 0 0
..................................................TCGCCCGATACAGTACTACCT.................................................................................................................................................................................... 21 0 20 0.05 1 1 0 0 0 0 0
.........CTGGCCGGCTGGGGAGTCAAAG............................................................................................................................................................................................................................ 22 0 20 0.05 1 0 1 0 0 0 0
...............................................................................................................................................................................................................CGGTTTCTCTACGACCCTACCGCTT................... 25 0 20 0.05 1 0 1 0 0 0 0
........................GTGAAAGTTAGTCCGAATAGTACTAT......................................................................................................................................................................................................... 26 1 20 0.05 1 1 0 0 0 0 0
......................................................................................................................................TCACCTCTTGCCTTGAGGGGTTTTTT........................................................................................... 26 1 20 0.05 1 0 1 0 0 0 0
.........................TCAAAGTTAGTCCGAATAGTACCAT......................................................................................................................................................................................................... 25 1 20 0.05 1 0 1 0 0 0 0
...........GGCCGGCTGGGGAGTCAAAGTTAGTCCG.................................................................................................................................................................................................................... 28 0 20 0.05 1 0 1 0 0 0 0
.....................................................CCCGATACAGTACTACCTGCTTG............................................................................................................................................................................... 23 0 20 0.05 1 1 0 0 0 0 0
......................................................................................................................................................GGGGTTCTTTCAGGCATTTT................................................................................. 20 1 20 0.05 1 0 0 0 0 1 0
.....................................................................................................................................AACACCTCTTGCCTTGAGGGGTTCTTT........................................................................................... 27 1 20 0.05 1 1 0 0 0 0 0
.......................................................................................................................................CACCTCTTGCCTTGAGGGGTTTTTT........................................................................................... 25 1 20 0.05 1 0 1 0 0 0 0
.....................................................................................................................................ATCGCCTCTTGCCTTGAGGGGTTCTTT........................................................................................... 27 1 20 0.05 1 1 0 0 0 0 0
......................................................................................................................................................................TTTACCCTAGTACCTAGGCAGT............................................................... 22 0 20 0.05 1 0 1 0 0 0 0
......................GAGTCAAAGTTAGTCCGAATAGTACTA.......................................................................................................................................................................................................... 27 0 20 0.05 1 1 0 0 0 0 0
.............................................................................................................................................TTGCCTTGAGGGGTTCTTTCAG........................................................................................ 22 0 20 0.05 1 1 0 0 0 0 0
................................................ATTCGCCCGATACAGTACTACCT.................................................................................................................................................................................... 23 0 20 0.05 1 0 1 0 0 0 0
.............CCGGCTGGGGAGTCAAAGTT.......................................................................................................................................................................................................................... 20 0 20 0.05 1 1 0 0 0 0 0
....................................CAGAATAGTACTATTCGCCCGATAC.............................................................................................................................................................................................. 25 1 20 0.05 1 0 0 0 0 0 1
..............CGGCTGGGGAGTCAAAGTTAGTCCGA................................................................................................................................................................................................................... 26 0 20 0.05 1 1 0 0 0 0 0
..................................................TCGCCCGATACAGTACTACCTGCTTG............................................................................................................................................................................... 26 0 20 0.05 1 1 0 0 0 0 0
.........................................................................................................................................................................................AGTTAGAGGTTCCGTCTAT............................................... 19 0 20 0.05 1 1 0 0 0 0 0
..........................CAAAGTTAGTCCGAATAGTACTA.......................................................................................................................................................................................................... 23 0 20 0.05 1 0 1 0 0 0 0
.............CCGGCTGGGGGGTCAAAGTTAGT....................................................................................................................................................................................................................... 23 1 20 0.05 1 0 0 1 0 0 0
............................................................................................................................................CTTGCCTTGAGGGGTTCTTT........................................................................................... 20 0 20 0.05 1 0 0 1 0 0 0
..........CGGCCGGCTGGGGAGTCAAAGTTAGT....................................................................................................................................................................................................................... 26 1 20 0.05 1 0 1 0 0 0 0
......................................................................................................................................................GGGGTTCTTTCAGGCATTTA................................................................................. 20 0 20 0.05 1 0 0 1 0 0 0
...........................................GTACTATTCGCCCGATACAGTACTACCT.................................................................................................................................................................................... 28 0 20 0.05 1 0 0 1 0 0 0
.................CTGGGGAGTCAAAGTTAGT....................................................................................................................................................................................................................... 19 0 20 0.05 1 1 0 0 0 0 0
..................TGGGGAGTCAAAGTTAGTCCGCAT................................................................................................................................................................................................................. 24 1 20 0.05 1 0 1 0 0 0 0
...........GGCCGGCTGGGGAGTCAAAGGT.......................................................................................................................................................................................................................... 22 1 20 0.05 1 0 1 0 0 0 0
............TTCGGCTGGGGAGTCAAAGTTAGT....................................................................................................................................................................................................................... 24 2 20 0.05 1 0 1 0 0 0 0
..............................................CTATTCGCCCGATACAGTACTACCT.................................................................................................................................................................................... 25 0 20 0.05 1 0 1 0 0 0 0
..........................................AGTACTATTCGCCCGATA............................................................................................................................................................................................... 18 0 20 0.05 1 0 1 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droAna3 scaffold_13266:19515303-19515553 - dan_2129 A-CTCTGGGGG-ACCGGCCGACCCCTCAGTTTCAATC--AGGCTTATCATGATAA-GCGGG-CTATGTCATGATGGACGAAC-CCCTCCCCGGCTACTCGTGGGT-CCAAACAT--G---AAT--TCTAGA---------AACAACACAAACAAAAAT-----AGTGGAGAACGGAACTCC----------------------------------------------------------------------------CCAAGAAAGTCCGTAA--ATGGGATCATGGATCCGTCAATCTCCAA-------------------------GG--------------CAGATAAAGGCCAAAGAGATGCTGGGATGGCG---------------------AAGCTCCCCACTGAGGG-GCAA
droBip1 scf7180000391711:4177-4427 - A-CTCTGG-GGGACCGGCCGACCTCCCAGTTTTAACC--AGGCTTATTGTGACAA-GCGGG-CTATGTCATGATGGACGAAC-CCCTTCCCGCCTACTCGTGGGA-CCAAATAT--G---AAT--TCTATA---------AATAAAACCAAAAACCAA-----AGTGGAGAACGGAACTCC----------------------------------------------------------------------------CTAAAAAAGTTCGGAA--ATGGGGTCAGTGACCCGTCAATCTCCAA-------------------------GG--------------CCATAAAAAGCCAAGGAGTTGCTGAGATGGAG---------------------AAGCCACCCACAGAGGG-GTAA
droKik1 scf7180000302476:3162003-3162032 + C-CGAAGG-G--------------------------------------------------A-TGCTGGAATGGGGAGA---CTCCC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droFic1 scf7180000454106:234914-235008 + A-CTCTGC-GC-ACCTGTCGAACC-GCAGTTTCAATT-CAGACTTCCTGCGACATCTCGGG-CTCTGTCGTGGGCGAC---CTCCTTTCCCGTGCACTCGTGGG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droEle1 scf7180000491280:2552694-2552788 - A-CTCTGC-GC-ACCTGTCGACCC-GCAGTTTCAATC-CAGACTTCCTGCGGCACCTCGGG-CTCTGGCGTGGGCGAC---CTCCTTTCCCGTGCACTCGTGGG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droRho1 scf7180000777846:3771-3974 - A-CTCTGG-ATGACCATCCGATCTACCAGATTCAACT--AAGCTTACCAGGGCAA-GCGGA-CTATCCCAAGGCGGATTTAC-GCTTTA--------------------AATAT--G---GAC--ACTAGG---------AACAAACGAACCAAAATA-----AACGCATACAGAGGCCTA----------------------------------------------------------------------------TCGAAAACTCTCGAAA--ACGAATTCAAAGTCTCGCAAAG-A------------------------------CCACTACAGAGAA---------------------------------------------------------ATGCACCAATGAGAG-CCAT
droBia1 scf7180000301661:8332-8500 + A-CTCCGG-TTGACCGGTCGACCTTCCAACTTTAAAT--GTGCTTCCCGTGGAACGCTATG-CC-----CTGGTGAGCTATA-CTCTTCCAGCATACTCGTGGGA-CCAAA-ACCTGTACAAG--AAAACAAACAACAAA-------ACAA---AAAT----------AATGCGGGACTCC----------------------------------------------------------------------------ATGAAAATACCCAGCAA-AAGG------------------------------------------------------------------------------------------------------------------------------------------GA
droTak1 scf7180000415457:2174-2394 - C--TCAGG-G--ACATGGCGACCC-CCTGTTCTAATTACCGCCTTACCCGGGCATCGCGGATCTTTGCCCGGGTGGACCTTC-CCCTTCTCCGCAACTCGTGGGA-CCTAACAT--G---GAG--ACAACTAACAAAATA---------ACACAAATTAAC---ACAGAGACGGGAACTCTT------------------AAAAAACCCACAGAAATACCGAGCACTGGCTCCAAC-------------------------------------------------------GCAAGC-A------------------------------C-------------------------------------------------------------------CAGCACGGTCCGGAAGGTACCA
droEug1 scf7180000409555:743649-743743 - A-CTCTGC-GC-ACCTGTCGACCC-GCAGTTTTAGTC-CAGACTTCCTGCGGCATCTCGGG-CTCTGCCGTGGGCGAC---CTCCTTTCCCGTGCACTCGTGGG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
dm3 chr3R:26248163-26248408 - A-CTCTGC-GC-ACCTGTCCACCC-GCAGTTTCAACT-CGGACTTCTTGCGGCACCTCGGG-CTCTGCCGTGGGCGAC---CTCCTTTCCCGTGCACTCGTGGGAACCAA--AT--G---AATAGTTTAGA---------AGTAA--------------------ATGAGTCTGATGCTGCTCCAGAAGCATCACCCAACCGAAATCCTTCAGTGGATTCGGGTCCTGGCTTTGTCAGGCTGAAAACCAGGCAAAAG------------------------------------------------------------------------AAGCTGCTGCGAA-------------------------------------------------------AGGCTCTTCATGGAGGG-CTGA
droSim2 3r:25567269-25567514 - A-CTCTGC-GC-ACCTGTCCACCC-GCAGTTTCAACT-CGGACTTCCTGTGGCACCTCGGG-CTCTGCCGTGGGTGAC---CTCCTTTCCCGTGCACTCGTGGGAACCAA--AT--G---AATAGTCTAGA---------AGCAA--------------------ATGAGTTTGATGCTGCTCCAGAAGCATCACCCAACCGAAATCCTTCAGTGGATTCGGGTCCTGGCTTTGTCAGGCTGAAAACCAGGCAAAAA------------------------------------------------------------------------AAGCTGCTGCGAA-------------------------------------------------------AGGCTCTTCATGGAGGG-CTGA
droSec2 scaffold_4:5072739-5072984 - A-CTCTGC-GC-ACCTGTCCACCC-GCAGTTTCAACT-CGGACTTCCTGTGGCACCTCGGG-CTCTGCTGTGGGTGAC---CTCCTTTCCCGTGCACTCGTGGGAACCAA--AT--G---AATAGTCTAAA---------AGTAA--------------------ATGAGTTTGATGCTGCTCCAGAAGCATCACCCAACCGAAATCCTTCAGTGGATTCGGGTCCTGGCTTTGTCAGGCTGAAAACCAGACAAAAA------------------------------------------------------------------------AAGCTGCTGCGAA-------------------------------------------------------AGGCTCTTCATGGAGGG-CTGA
droYak3 v2_chrUn_002:304467-304718 + AGCTCAGG-GT-ACCTGGCGACCC-CCTGTTTTAAGA--AGCCTTACCCGGGCGTCGCAGATCTCCGCCCGGGTGGACCCTC-CTTTTCTCCGCAACTCGTGGGAATCAC--AT--G---AAG--TCTATA---------AACAAAAATAA---A---------AAGGAGTCAGGATCTCCC--AA---------------------------------------------------------------------------AAAAACCTACCCATACGGCAGC-------------G--ACGACTGAGTCTGGCCGAACAACCCTCAAGGCA--GCGAAATTGGC----------G--------------------ATTGAGCCGACCTGCCTGGGC------TCCACCATAGG-ATCA
droEre2 scaffold_4820:1762835-1762954 + A-CTCTGC-GC-ACCTGTCCACCC-GCAGTTTCAATT-CGGACTTCCTGCGGCACCTCGGG-CTCTGTCGTGGGCGAC---CTCCGTTCCCGTGCACTCGTGGGAACCAA--AT--G---AACAGTCTAGA---------AGTAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
dp5 Unknown_group_548:9388-9636 - A-CTCTGG-AT-ACCTGCCGACCT-CCAGTTTTAATA--AGGCTTCCCGGGACAC-GCGGG-CTATGCCCCGGGCGACTAAC-CCCTTCCCGCCTACTCGTGGGA-TCAAATAT--G---CCA--AATTTTAATATCAAA---------ACAAAAAACACCGCAAAGGAGCACGGCACTCCTCCTAAAGTGCC----------------------------------------------------------------------------GGA-----GG--GAAAAGA-CCATCCCTCTACAAACGCATCTGGGAAACCAGTGCCCAAAAAG--ACGGGGAAGGA----------G--------------------A---------------------------CTAAGTCGGT-CCAC
droPer2 scaffold_636:10090-10338 - A-CTCTGG-AT-ACCTGCCGACCT-CCAGTTTTAATA--AGGCTTCCCGGGACAC-GCGGG-CTATGCCCCGGGCGACTAAC-CCCTTCCCGCCTACTCGTGGGA-TCAAATAT--G---CTA--AATTTTAATATCAAA---------ACAAAAAACACCGCAAAGGAGCACGGCACTCCTCCTAAAGTGCC----------------------------------------------------------------------------GGA-----GG--GAAAAGA-CCATCCCTCTACAAACGCATCTGGGAAACCAGTGCCCAAAAAG--ACGGGGAAGGA----------G--------------------A---------------------------CTAAGTCGGT-CCAC
droWil2 scf2_1100000004963:1289074-1289114 - T-GTGTGC-AA-AAACGAAAACT---------------------------------------------------------------------------------------------------------AGC---------AACAACAACAACAAAAAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droVir3 scaffold_12855:4508308-4508367 + A-AAGCCC-GT-AAATG-----------------------------------------------------------------------------------------------------------------------------------------------------GGAGTACGGG----------------------------------------------------------------------------------------------------------------TCTGCGAATCTACG------------------------------------GGAATGCGACTAAGGCTCAG-----------------------------------------------------------AG
droMoj3 scaffold_6540:25424960-25425011 + C-CAA-----------------------------------------------------------------------------------------------------------------------------A---------AACAACAGCAGCAAAAAT---------------------------------------------------------------------------------------ATCAGAAAATAA------------------------------------------------------------------------AAGACACCAGGGC-------------------------------------------------------AGTC------------------
droGri2 scaffold_14853:8684054-8684082 - A-CTCTGG-AT-ATCTGCTGACCT-TCAGTTTC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droAna3
A-CTCTGGGGG-ACCGGCCGACCCCTCAGTTTCAATC--AGGCTTATCATGATAA-GCGGG-CTATGTCATGATGGACGAAC-CCCTCCCCGGCTACTCGTGGGT-CCAAACAT--G---AAT--TCTAGA---------AACAACACAAACAAAAAT-----AGTGGAGAACGGAACTCC----------------------------------------------------------------------------CCAAGAAAGTCCGTAA--ATGGGATCATGGATCCGTCAATCTCCAA-------------------------GG--------------CAGATAAAGGCCAAAGAGATGCTGGGATGGCG---------------------AAGCTCCCCACTGAGGG-GCAASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
..............................................................................................................................................................................................................................................................................................................................................................AAGGCCAAAGAGATGCTGGGATGG.............................................2441.004310000
...................................................................TCATGATGGACGAAC-CCCTCCCCGG......................................................................................................................................................................................................................................................................................................................................2521.002200000
...................................................................TCATGATGGACGAAC-CCCTCCCCGGC.....................................................................................................................................................................................................................................................................................................................................2620.501100000
.......................................................................GATGGACGAAC-CCCTCCCCGG......................................................................................................................................................................................................................................................................................................................................2120.501100000
....................................................................CATGATGGACGAAC-CCCTCCCCGG......................................................................................................................................................................................................................................................................................................................................2420.501100000
........................................................................ATGGACGAAC-CCCTCCCCGGCTA...................................................................................................................................................................................................................................................................................................................................2320.501100000
..................................................................GTCATGATGGACGAAC-CCCTCCCCGG......................................................................................................................................................................................................................................................................................................................................2620.501100000
.................................................................................................................................................................................................................................................................................................................................................................GCCAAAGAGATGCTGGGATGGC............................................22200.306060000
..............................................................................................................................................................................................................................................................................................................................................................AAGGCCAAAGAGATGCTGGGATG..............................................2340.251100000
..............................................................................................................................................................................................................................................................................................................................................................AAGGCCAAAGAGATGCTGGGATGGC............................................2540.251100000
...........................................................................................................................................................................................................................................................................................................CCAA-------------------------GG--------------CAGATAAAGGCCAAAG...........................................................2250.201010000
................................................................................................................................................................................................................................................................................................TCCGTCAATCTCCAA-------------------------GG--------------CAGATAA....................................................................2450.201010000
..............................................................................................................................................................................................................................................................................................GATCCGTCAATCTCCAA-------------------------GG--------------CAGATAAAA..................................................................2870.141100000
........................................................................................................T-CCAAACAT--G---AAT--TCTAGA---------AA.....................................................................................................................................................................................................................................................................................2180.131100000
..........................................................................................................CCAAACAT--G---AAT--TCTAGA---------AACAACACAAA............................................................................................................................................................................................................................................................................2980.131100000
..............................................................................................................................................................................................................................................................................................................................................................AAGGCCAAAGAGATGCTGGGATGGT............................................2580.131100000
..........................................................................................................CCAAACAT--G---AAT--TCTAGA---------AACAACAC...............................................................................................................................................................................................................................................................................2680.131100000
..................................................................................................................................................................................................................................................................CAAGAAAGTCCGTAA--ATGGG...........................................................................................................................................20200.102000002
...................................................................................................................................................................................CC----------------------------------------------------------------------------CCAAGAAAGTCCGTAA--ATGG............................................................................................................................................22200.102200000
.......................CCTCAGTTTCAATC--AGGCTTA.....................................................................................................................................................................................................................................................................................................................................................................................21200.102000002
..................................................................................................................................................................................................................................................................................................................................................................................ATGGCG---------------------AAGCTCCCCACTGAG.......21200.051000001
....................................C--AGGCTTATCATGATAA-GCGGG-CTT..................................................................................................................................................................................................................................................................................................................................................................25200.051010000
.................................................................................................................................................................................CTCC----------------------------------------------------------------------------CCAAGAAAGTCCGTAA--ATGGG...........................................................................................................................................25200.051100000
...................................................................................................................................................................................CC----------------------------------------------------------------------------CCAAGAAAGTCCGTAA--ATGGG...........................................................................................................................................23200.051100000
....................................C--AGGCTTATCATGATAA-GCGGG-CTATG................................................................................................................................................................................................................................................................................................................................................................27200.051100000
....................................................................................................................................................................................................................................................................................................................................................................AAAGAGATGCTGGGATGGCG---------------------AA....................22200.051010000
..............................................................CTATGTCATGATGGACGAAC-CCCT............................................................................................................................................................................................................................................................................................................................................24200.051100000
..................................................................................................................................................................................TCC----------------------------------------------------------------------------CCAAGAAAGTCCGTAA--ATGG............................................................................................................................................23200.051100000
.................................................................................................................................................................................................................................................................CCAAGAAAGTCCGTAA--ATGGG...........................................................................................................................................21200.051000010
....................................................................................................................................................................................C----------------------------------------------------------------------------CCAAGAAAGTCCGTAA--ATGGGATCA.......................................................................................................................................26200.051100000
...................................................................................................................................................................................CC----------------------------------------------------------------------------CCAAGAAAGTCCGTAA--ATGGGATCAT......................................................................................................................................28200.051100000
...................GACCCCTCAGTTTCAATC--AGGCTTATCAT.................................................................................................................................................................................................................................................................................................................................................................................29200.051100000
............................................................................................................................................................................................................................................................................................TGGATCCGTCAATCTCCAA-------------------------GG--------------CAGATA.....................................................................27200.051100000
..................................................................................................................................................................................TCC----------------------------------------------------------------------------CCAAGAAAGTCCGTAA--ATGGGATC........................................................................................................................................27200.051100000
..................................................................................................................................................................................................................................................................CAAGAAAGTCCGTAA--ATGGGATCATGGA...................................................................................................................................28200.051100000
A-CTCTGGGGG-ACCGGCCGACCC...........................................................................................................................................................................................................................................................................................................................................................................................................22200.051100000
..................................................................................................................................................................................TCC----------------------------------------------------------------------------CCAAGAAAGTCCGTAA--ATGGGAT.........................................................................................................................................26200.051100000
..................................................................................................................................................................................................................................................................................................CGTCAATCTCCAA-------------------------GG--------------CAGAT......................................................................20200.051100000
..................................................................................................................................................................................TCC----------------------------------------------------------------------------CCAAGAAAGTCCGTAA--ATGGG...........................................................................................................................................24200.051100000
........................................................................................................................................................................................................................................................................................ATCATGGATCCGTCAATCTCC......................................................................................................................21200.051000010
............................................TATCATGATAA-GCGGG-CTATGC...............................................................................................................................................................................................................................................................................................................................................................22200.051010000
................................................ATGATAA-GCGGG-CTATGTCA.............................................................................................................................................................................................................................................................................................................................................................20200.051100000
..........................................CTTATCATGATAA-GCGGG-CTATGC...............................................................................................................................................................................................................................................................................................................................................................24200.051010000
............ACCGGCCGACCCCTCAGTTT...................................................................................................................................................................................................................................................................................................................................................................................................20200.051100000
...................................................................................................................................................................................CC----------------------------------------------------------------------------CCAAGAAAGTCCGTAA--ATGGGAT.........................................................................................................................................25200.051100000
droBip1
A-CTCTGG-GGGACCGGCCGACCTCCCAGTTTTAACC--AGGCTTATTGTGACAA-GCGGG-CTATGTCATGATGGACGAAC-CCCTTCCCGCCTACTCGTGGGA-CCAAATAT--G---AAT--TCTATA---------AATAAAACCAAAAACCAA-----AGTGGAGAACGGAACTCC----------------------------------------------------------------------------CTAAAAAAGTTCGGAA--ATGGGGTCAGTGACCCGTCAATCTCCAA-------------------------GG--------------CCATAAAAAGCCAAGGAGTTGCTGAGATGGAG---------------------AAGCCACCCACAGAGGG-GTAASizeHit CountTotal NormTotal
No Reads
droKik1
C-CGAAGG-G--------------------------------------------------A-TGCTGGAATGGGGAGA---CTCCC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droFic1
A-CTCTGC-GC-ACCTGTCGAACC-GCAGTTTCAATT-CAGACTTCCTGCGACATCTCGGG-CTCTGTCGTGGGCGAC---CTCCTTTCCCGTGCACTCGTGGG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
A-CTCTGC-GC-ACCTGTCGACCC-GCAGTTTCAATC-CAGACTTCCTGCGGCACCTCGGG-CTCTGGCGTGGGCGAC---CTCCTTTCCCGTGCACTCGTGGG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
A-CTCTGG-ATGACCATCCGATCTACCAGATTCAACT--AAGCTTACCAGGGCAA-GCGGA-CTATCCCAAGGCGGATTTAC-GCTTTA--------------------AATAT--G---GAC--ACTAGG---------AACAAACGAACCAAAATA-----AACGCATACAGAGGCCTA----------------------------------------------------------------------------TCGAAAACTCTCGAAA--ACGAATTCAAAGTCTCGCAAAG-A------------------------------CCACTACAGAGAA---------------------------------------------------------ATGCACCAATGAGAG-CCATSizeHit CountTotal NormTotal
No Reads
droBia1
A-CTCCGG-TTGACCGGTCGACCTTCCAACTTTAAAT--GTGCTTCCCGTGGAACGCTATG-CC-----CTGGTGAGCTATA-CTCTTCCAGCATACTCGTGGGA-CCAAA-ACCTGTACAAG--AAAACAAACAACAAA-------ACAA---AAAT----------AATGCGGGACTCC----------------------------------------------------------------------------ATGAAAATACCCAGCAA-AAGG------------------------------------------------------------------------------------------------------------------------------------------GASizeHit CountTotal NormTotal
No Reads
droTak1
C--TCAGG-G--ACATGGCGACCC-CCTGTTCTAATTACCGCCTTACCCGGGCATCGCGGATCTTTGCCCGGGTGGACCTTC-CCCTTCTCCGCAACTCGTGGGA-CCTAACAT--G---GAG--ACAACTAACAAAATA---------ACACAAATTAAC---ACAGAGACGGGAACTCTT------------------AAAAAACCCACAGAAATACCGAGCACTGGCTCCAAC-------------------------------------------------------GCAAGC-A------------------------------C-------------------------------------------------------------------CAGCACGGTCCGGAAGGTACCASizeHit CountTotal NormTotal
No Reads
droEug1
A-CTCTGC-GC-ACCTGTCGACCC-GCAGTTTTAGTC-CAGACTTCCTGCGGCATCTCGGG-CTCTGCCGTGGGCGAC---CTCCTTTCCCGTGCACTCGTGGG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
dm3
A-CTCTGC-GC-ACCTGTCCACCC-GCAGTTTCAACT-CGGACTTCTTGCGGCACCTCGGG-CTCTGCCGTGGGCGAC---CTCCTTTCCCGTGCACTCGTGGGAACCAA--AT--G---AATAGTTTAGA---------AGTAA--------------------ATGAGTCTGATGCTGCTCCAGAAGCATCACCCAACCGAAATCCTTCAGTGGATTCGGGTCCTGGCTTTGTCAGGCTGAAAACCAGGCAAAAG------------------------------------------------------------------------AAGCTGCTGCGAA-------------------------------------------------------AGGCTCTTCATGGAGGG-CTGASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.....................................................................................................................................................................................................................................................ACCAGGCAAAAG------------------------------------------------------------------------AAGCTG....................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000
.......................................................................GGGCGAC---CTCCTTTCCCG.......................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................AAAG------------------------------------------------------------------------AAGCTGCTGCGAA-------------------------------------------------------AGGCT.................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
droSim2
A-CTCTGC-GC-ACCTGTCCACCC-GCAGTTTCAACT-CGGACTTCCTGTGGCACCTCGGG-CTCTGCCGTGGGTGAC---CTCCTTTCCCGTGCACTCGTGGGAACCAA--AT--G---AATAGTCTAGA---------AGCAA--------------------ATGAGTTTGATGCTGCTCCAGAAGCATCACCCAACCGAAATCCTTCAGTGGATTCGGGTCCTGGCTTTGTCAGGCTGAAAACCAGGCAAAAA------------------------------------------------------------------------AAGCTGCTGCGAA-------------------------------------------------------AGGCTCTTCATGGAGGG-CTGASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
............................................................................................TGCACTCGTGGGAACCAA--AT--G---AATAGTCTA..................................................................................................................................................................................................................................................................................................3011.00100000000100000000
droSec2
A-CTCTGC-GC-ACCTGTCCACCC-GCAGTTTCAACT-CGGACTTCCTGTGGCACCTCGGG-CTCTGCTGTGGGTGAC---CTCCTTTCCCGTGCACTCGTGGGAACCAA--AT--G---AATAGTCTAAA---------AGTAA--------------------ATGAGTTTGATGCTGCTCCAGAAGCATCACCCAACCGAAATCCTTCAGTGGATTCGGGTCCTGGCTTTGTCAGGCTGAAAACCAGACAAAAA------------------------------------------------------------------------AAGCTGCTGCGAA-------------------------------------------------------AGGCTCTTCATGGAGGG-CTGASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
No Reads
droYak3
AGCTCAGG-GT-ACCTGGCGACCC-CCTGTTTTAAGA--AGCCTTACCCGGGCGTCGCAGATCTCCGCCCGGGTGGACCCTC-CTTTTCTCCGCAACTCGTGGGAATCAC--AT--G---AAG--TCTATA---------AACAAAAATAA---A---------AAGGAGTCAGGATCTCCC--AA---------------------------------------------------------------------------AAAAACCTACCCATACGGCAGC-------------G--ACGACTGAGTCTGGCCGAACAACCCTCAAGGCA--GCGAAATTGGC----------G--------------------ATTGAGCCGACCTGCCTGGGC------TCCACCATAGG-ATCASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
........................................................................................................................................................................................................................................................................................................................GCCGAACAACCCTCAAGGCA--GCGA.................................................................................2440.75303000000000
......................................................................................................................................................................................................................................................................................................................TGGCCGAACAACCCTCAAGGCA--GCGAAA...............................................................................2820.50101000000000
...........................TGTTTTAAGA--AGCCTTACCCGGGCGT............................................................................................................................................................................................................................................................................................................................................................................2630.33101000000000
.................................................................................................................................TA---------AACAAAAATAA---A---------AAGGAGTCAGG....................................................................................................................................................................................................................................................2530.33101000000000
.................................................................................................................................................................................................................................................................................................................GAGTCTGGCCGAACAACCCTCAAGGCA--.....................................................................................2740.25101000000000
........................................................................................................................................................................................................................................................................................................................GCCGAACAACCCTCAAGGCA--GCGAA................................................................................2540.25101000000000
......................................................................................................................................................................................................................................................................................................................TGGCCGAACAACCCTCAAGGCA--GCGA.................................................................................2640.25101000000000
.............................................................................................................................................................................................................................................................................................................GACTGAGTCTGGCCGAACAACCCTCA............................................................................................2640.25101000000000
................................................................................................................................................................................................................................................................................................................TGAGTCTGGCCGAACAACCCTCAAGGCA--.....................................................................................2840.25101000000000
........................................................................................................................................................................................................................................................................................................................GCCGAACAACCCTCAAGGCA--GCG..................................................................................2340.25101000000000
........................................................................................................................................................................................................................................................................................................................GCCGAACAACCCTCAAGGCA--GC...................................................................................2240.25101000000000
..............................................................................................................................................................................................................................................................................................................ACTGAGTCTGGCCGAACAACCCTCAAGG.........................................................................................2840.25101000000000
............................................................................................................................................AACAAAAATAA---A---------AAGGAGTCAGGATA.................................................................................................................................................................................................................................................2650.20101000000000
..............................................................................CCTC-CTTTTCTCCGCAACTCGTGGGATA........................................................................................................................................................................................................................................................................................................................28180.06101000000000
..............................................................................CCTC-CTTTTCTCCGCAACTCGTGGG...........................................................................................................................................................................................................................................................................................................................25180.06101000000000
...........................................................GATCTCCGCCCGGGTGGACCCTC-CTT.............................................................................................................................................................................................................................................................................................................................................26190.05101000000000
...............................................................TCCGCCCGGGTGGACCCTC-CTTTTCT.........................................................................................................................................................................................................................................................................................................................................26190.05101000000000
................................................................................TC-CTTTTCTCCGCAACTCGTGGGA..........................................................................................................................................................................................................................................................................................................................24200.05101000000000
................................................................................TC-CTTTTCTCCGCAACTCGT..............................................................................................................................................................................................................................................................................................................................20200.05101000000000
...............................................................TCCGCCCGGGTGGACCCTC-CTT.............................................................................................................................................................................................................................................................................................................................................22200.05101000000000
................................................................................TC-CTTTTCTCCGCAACTCGTGGG...........................................................................................................................................................................................................................................................................................................................23200.05101000000000
...............................................................TCCGCCCGGGTGGACCCTC-CTTTTC..........................................................................................................................................................................................................................................................................................................................................25200.05100100000000
.................................................................................C-CTTTTCTCCGCAACTCGTGGGA..........................................................................................................................................................................................................................................................................................................................23200.05101000000000
droEre2
A-CTCTGC-GC-ACCTGTCCACCC-GCAGTTTCAATT-CGGACTTCCTGCGGCACCTCGGG-CTCTGTCGTGGGCGAC---CTCCGTTCCCGTGCACTCGTGGGAACCAA--AT--G---AACAGTCTAGA---------AGTAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
No Reads
dp5
A-CTCTGG-AT-ACCTGCCGACCT-CCAGTTTTAATA--AGGCTTCCCGGGACAC-GCGGG-CTATGCCCCGGGCGACTAAC-CCCTTCCCGCCTACTCGTGGGA-TCAAATAT--G---CCA--AATTTTAATATCAAA---------ACAAAAAACACCGCAAAGGAGCACGGCACTCCTCCTAAAGTGCC----------------------------------------------------------------------------GGA-----GG--GAAAAGA-CCATCCCTCTACAAACGCATCTGGGAAACCAGTGCCCAAAAAG--ACGGGGAAGGA----------G--------------------A---------------------------CTAAGTCGGT-CCACSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
......................................................................................................................................................................................................................................................................................................CCTCTACAAACGCATCTGGGAAAC.....................................................................................................24209.751950179101100400
......................................................................................................................................................................................................................................................................................................CCTCTACAAACGCATCTGGGAAA......................................................................................................23204.859709030002200
.....TGG-AT-ACCTGCCGACCT-CCA.......................................................................................................................................................................................................................................................................................................................................................................................................20204.408808800000000
......................................................................................................................................................................................................................................................................................................CCTCTACAAACGCATCTGGGAAACC....................................................................................................25204.008007160001200
......................................................................................................................................................................................................................................................................................................CCTCTACAAACGCATCTGGGAA.......................................................................................................22203.807607220200000
......................................................................................................................................................................................................................................................................................................CCTCTACAAACGCATCTGGGAAACCA...................................................................................................26202.454904700000020
......................................................................................................................................................................................................................................................................................................CCTCTACAAACGCATCTGGGA........................................................................................................21202.204404300100000
......................................................................................................................................................................................................................................................................................................CCTCTACAAACGCATCTGGG.........................................................................................................20201.503002901000000
......................................................................................................................................................................................................................................................................................................CCTCTACAAACGCATCTGG..........................................................................................................19200.951901800100000
.................................................................................................................................................................................................................................................................................................................................TGCCCAAAAAG--ACGGGGAAGGA----------G--------------------...........................................23200.651301300000000
................................................................................................................................................................................ACTCCTCCTAAAGTGCC----------------------------------------------------------------------------GGA-----GG--..........................................................................................................................................22200.551101100000000
...................................TA--AGGCTTCCCGGGACAC-GCGGG-C....................................................................................................................................................................................................................................................................................................................................................................2420.5010100000000
......GG-AT-ACCTGCCGACCT-CCAGT.....................................................................................................................................................................................................................................................................................................................................................................................................21200.4590900000000
.................................................................................................................................................................................................................................................................................................................................TGCCCAAAAAG--ACGGGGAAGGA----------................................................................22200.4080800000000
.......................................................................................................................................................................................................................................................................................................CTCTACAAACGCATCTGGGAAACCA...................................................................................................25200.4080800000000
......................................................................................................................................................................................................................................................................................................CCTCTACAAACGCATCTGGGAAACCAG..................................................................................................27200.3570600100000
......GG-AT-ACCTGCCGACCT-CCAGTT....................................................................................................................................................................................................................................................................................................................................................................................................22200.3570700000000
.......................................................................................................................................................................................................................................................................................................CTCTACAAACGCATCTGGGAAA......................................................................................................22200.3570700000000
.......................................................................................................................................................................................................................................................................................................CTCTACAAACGCATCTGGGA........................................................................................................20200.3060600000000
.......................................................................................................................................................................................................................................................................................................................................AAAAG--ACGGGGAAGGA----------G--------------------A---------------------------CTAAG..........23170.2950000000410
.................................................................................................................................................................................................................................................................................................................................TGCCCAAAAAG--ACGGGGAAGGA----------G--------------------A---------------------------C..............25200.2550030100010
.............................................................................................CTACTCGTGGGA-TCAAATAT--G---C..........................................................................................................................................................................................................................................................................................................22130.2330000000300
................................................................................................................................................................................................................................................................................................................................GTGCCCAAAAAG--ACGGGGA..............................................................................19200.2040400000000
......................................................................................................................................................................................................................................................................................................CCTCTACAAACGCATCTGGGAAACCAGTG................................................................................................29200.2040400000000
.......................................................................................................................................................................................................................................................................................................CTCTACAAACGCATCTGGGAA.......................................................................................................21200.2040400000000
........................................................................................................................................................AAAAACACCGCAAAGGAGCACGGCA..................................................................................................................................................................................................................................................25200.2040000000400
......................................................................................................................................................CAAAAAACACCGCAAAGGAGC........................................................................................................................................................................................................................................................21200.1530300000000
.....................................................................................................................................................................................................................................................................................................................................................AGGA----------G--------------------A---------------------------CTAAGTCGGT-CCA.19200.1530300000000
.........................................................................................................................................................................................................................................................................................................CTACAAACGCATCTGGGAAAC.....................................................................................................21200.1530100011000
.......G-AT-ACCTGCCGACCT-CCAGTT....................................................................................................................................................................................................................................................................................................................................................................................................21200.1530300000000
.............................................................................................................................................................CACCGCAAAGGAGCACGGCAC.................................................................................................................................................................................................................................................21200.1530300000000
.....................................................................................................................................................................................TCCTAAAGTGCC----------------------------------------------------------------------------GGA-----GG--GAAAAG....................................................................................................................................23200.1530200100000
....................................................................................................................................................................................................................................................................................................................................................AAGGA----------G--------------------A---------------------------CTAAGTCGGT-C...18200.1530300000000
.....TGG-AT-ACCTGCCGACCT-CC........................................................................................................................................................................................................................................................................................................................................................................................................19200.1530030000000
.............................................................................................CTACTCGTGGGA-TCAAATAT--G---CCA--AATC..................................................................................................................................................................................................................................................................................................28150.1320000000020
......................................................................................................................................................................................................................................................................................................................................AAAAAG--ACGGGGAAGGA----------G--------------------A---------------------------CTAAG..........24170.1220000000200
....................................................................................................TGGGA-TCAAATAT--G---CCA--AATTT.................................................................................................................................................................................................................................................................................................2290.1110100000000
.....................................................................................................GGGA-TCAAATAT--G---CCA--AATTT.................................................................................................................................................................................................................................................................................................2190.1110100000000
..............................................................................................................................................................ACCGCAAAGGAGCACGGCACTCCTCC...........................................................................................................................................................................................................................................26200.1020200000000
......................................................................................................................................................................................................................................................................................................CCTCTACAAACGCATCTGGGAAACA....................................................................................................25200.1020000000200
.................................................................................................................................................................................................................................................................................................................................TGCCCAAAAAG--ACGGGGAAGGA----------G--------------------A---------------------------CT.............26200.1020200000000
........................................................................................................................................................................................TAAAGTGCC----------------------------------------------------------------------------GGA-----GG--GAAAAGA-..................................................................................................................................21200.1020200000000
................................................................................................................................................................................ACTCCTCCTAAAGTGCC----------------------------------------------------------------------------GGA-----GA--..........................................................................................................................................22200.1020200000000
............................................................................................................................................................................................................................................................................................AAGA-CCATCCCTCTACAAACG.................................................................................................................21200.1020200000000
...............................................................................AAC-CCCTTCCCGCCTACTCG...............................................................................................................................................................................................................................................................................................................................20200.1020200000000
.........AT-ACCTGCCGACCT-CCAGTTT...................................................................................................................................................................................................................................................................................................................................................................................................21200.1020200000000
..........................................................................................................................................................................................................................................................................................................TACAAACGCATCTGGGAAACCA...................................................................................................22200.1020200000000
...............................................................................................................................................................................................................................................................................................................................................CGGGGAAGGA----------G--------------------A---------------------------CTAAGTCGG......21200.1020000100010
..............................................................................TAAC-CCCTTCCCGCCTACTCG...............................................................................................................................................................................................................................................................................................................................21200.1020200000000
.....TGG-AT-ACCTGCCGACCT-CCAGTTTT..................................................................................................................................................................................................................................................................................................................................................................................................25200.1020200000000
..........................................................................................................................................................................................................................................................................................................TACAAACGCATCTGGGAAACC....................................................................................................21200.1020200000000
...............................................................................................................................................................CCGCAAAGGAGCACGGCACT................................................................................................................................................................................................................................................20200.1020200000000
.......................................................................................................................................................................................................................................................................................................CTCTACAAACGCATCTGGGAAACCAG..................................................................................................26200.1020200000000
.........................................................................................................................................................AAAACACCGCAAAGGAGCACGGCAC.................................................................................................................................................................................................................................................25200.1020200000000
..........................................................................................................................................................AAACACCGCAAAGGAGCACGG....................................................................................................................................................................................................................................................21200.1020200000000
.................................................................................................................................................................GCAAAGGAGCACGGCACTCCTCC...........................................................................................................................................................................................................................................23200.1020200000000
.....TGG-AT-ACCTGCCGACCT-CCAGT.....................................................................................................................................................................................................................................................................................................................................................................................................22200.1020020000000
.................................................................................................................................................................................................................................................................................................................................................GGGAAGGA----------G--------------------A---------------------------CTAAGTCGGT-C...21200.1020200000000
.............................................................................................................................................................CACCGCAAAGGAGCACGGCA..................................................................................................................................................................................................................................................20200.1020100010000
......................................................................................................................................................................................................................................................................................................................................AAAAAG--ACGGGGAAGGA----------G--------------------A---------------------------CT.............21200.1020200000000
.................................................................................................................................................................................CTCCTCCTAAAGTGCC----------------------------------------------------------------------------GG....................................................................................................................................................18200.1020200000000
........................................................................................................................................................................................................................................................................................................TCTACAAACGCATCTGGGAAA......................................................................................................21200.1020200000000
.........................................................................................................................................................................................................................................................................................GAAAAGA-CCATCCCTCTACAAACGC................................................................................................................25200.1020200000000
.............................................................................................CTACTCGTGGGA-TCAAATAT--G---CCA--A.....................................................................................................................................................................................................................................................................................................25130.0810000000100
.............................................................................................CTACTCGTGGGA-TCAAATAT--G---CC.........................................................................................................................................................................................................................................................................................................23130.0810000000100
...............................................................TATGCCCCGGGCGACTAAC-CCCTTCC.........................................................................................................................................................................................................................................................................................................................................26170.0610100000000
.....................................................................................................................................................................................................................................................................................................................................CAAAAAG--ACGGGGAAGGA----------G--------------------A---------------------------CTAAG..........25170.0610000000010
........................................................................................................................................................................................................................................................................................................................................AAAG--ACGGGGAAGGA----------G--------------------A---------------------------CTAAG..........22170.0610100000000
.........................................................................................................................................................................................................................................................................................................................................AAG--ACGGGGAAGGA----------G--------------------A---------------------------CTAAGT.........22180.0610100000000
.........................................................................................................................................................................................................................................................................................................................................AAG--ACGGGGAAGGA----------G--------------------A---------------------------CTAAG..........21180.0610000000010
.........................................................................................................................................................................................................................................................................................................................................AAG--ACGGGGAAGGA----------G--------------------A---------------------------CTAAGTCGG......25180.0610000001000
..........................................................................................................................................................................................................................................................................................................................................AG--ACGGGGAAGGA----------G--------------------A---------------------------CTAAGTCGG......24180.0610100000000
.......................................................................................................................................................................GAGCACGGCACTCCTCCTAAAGTGCC----------------------------------------------------------------------------......................................................................................................................................................26180.0610000000010
......................................................................................................................................................CAAAAAACACCGCAAAGGAGCACGGC...................................................................................................................................................................................................................................................26190.0510000000010
..................................................................................................................................................................................TCCTCCTAAAGTGCC----------------------------------------------------------------------------GGA-----GG--..........................................................................................................................................20200.0510100000000
...............................................................................................................................................................................................................................................................................................................................AGTGCCCAAAAAG--ACGGGGAGT............................................................................22200.0510100000000
.....................................................................................................................................................................................TCCTAAAGTGCC----------------------------------------------------------------------------GGA-----GG--GTT.......................................................................................................................................20200.0510100000000
.............................................................................................................................................................................................................................................................................................................................CCAGTGCCCAAAAAG--ACGGGG...............................................................................21200.0510100000000
...........................................................................................................................................................................................................................................................................................................................AACCAGTGCCCAAAAAG--ACGG.................................................................................21200.0510010000000
..................................................................................................................................................................................................................................................................................................CATCCCTCTACAAACGCATCTGG..........................................................................................................23200.0510100000000
.........................................................................................................................................................................................................................................................................................................CTACAAACGCATCTGGGAA.......................................................................................................19200.0510100000000
...............................................................................................................................................................................................................................................................................................................................AGTGCCCAAAAAG--ACGGGGA..............................................................................20200.0510100000000
................................................................................................................................................................CGCAAAGGAGCACGGCACTCCTC............................................................................................................................................................................................................................................23200.0510010000000
.................................................................................................................................................................................................................................................................................................................................TGCCCAAAAAG--ACGGGGAAGGA----------G--------------------A---------------------------AA.............26200.0510100000000
....CTGG-AT-ACCTGCCGACCT-CCAG......................................................................................................................................................................................................................................................................................................................................................................................................22200.0510100000000
.....TGG-AT-ACCTGCCGACCT-T.........................................................................................................................................................................................................................................................................................................................................................................................................18200.0510100000000
....................................................................................................................................................................................................................................................................................................TCCCTCTACAAACGCATCTGGGAAA......................................................................................................25200.0510100000000
................................................................................................................................................................................ACTCCTCCTAAAGTGCC----------------------------------------------------------------------------GGA-----GG--T.........................................................................................................................................23200.0510100000000
......................................................................................................................................................................................................................................................................................................CCTCTACAAACGCATCTGGGAAACCAA..................................................................................................27200.0510000100000
..................................................................................................................................................................................................................................................................................................................................GCCCAAAAAG--ACGGGGAAGGA----------G--------------------A---------------------------A..............24200.0510100000000
.........................................................................................................................................................AAAACACCGCAAAGGAGCACG.....................................................................................................................................................................................................................................................21200.0510100000000
........................................................................................................................................................AAAAACACCGCAAAGGAGCA.......................................................................................................................................................................................................................................................20200.0510000010000
.......................................................................................................................................................................................CTAAAGTGCC----------------------------------------------------------------------------GGA-----GG--GAAAAG....................................................................................................................................21200.0510000010000
..................................................................................................................................................................................................................................................................................................................................................GGAAGGA----------G--------------------A---------------------------CTAAGTCGGT-CC..21200.0510100000000
...............................................................................................................................................................................................................................................................................................................................................CGGGGAAGGA----------G--------------------A---------------------------CTAAGTCGGT-TT..24200.0510100000000
.............................................................................................................................................................CACCGCAAAGGAGCACGGCACTC...............................................................................................................................................................................................................................................23200.0510010000000
.....................................................................................................................................................................................................................................................................................................CCCTCTACAAACGCATCTGGGAAACCA...................................................................................................27200.0510100000000
............................................................................................................................................................ACACCGCAAAGGAGCACGGC...................................................................................................................................................................................................................................................20200.0510100000000
.....................................................................................................................................................................................................................................................................................................................................CAAAAAG--ACGGGGAAGGA----------G--------------------A---------------------------CTA............23200.0510100000000
.................................................................................................................................................................................................................................................................................................................................TGCCCAAAAAG--ACGGGGAAGGA----------A--------------------...........................................23200.0510100000000
.................................................................................................................................................................................................................................................................................................CCATCCCTCTACAAACGCATC.............................................................................................................21200.0510100000000
.....................................................................................................................................................................................................................................................................................................CCCTCTACAAACGCATCTGGGAA.......................................................................................................23200.0510100000000
.......G-AT-ACCTGCCGACCT-CCAGT.....................................................................................................................................................................................................................................................................................................................................................................................................20200.0510100000000
.............................................................................CTAAC-CCCTTCCCGCCTACTC................................................................................................................................................................................................................................................................................................................................21200.0510100000000
......................................................................................................................................................................................................................................................................................................CCTCTACAAACGCATCTG...........................................................................................................18200.0510001000000
.....TGG-AT-ACCTGCCGACCT-CCAGTTTTAA................................................................................................................................................................................................................................................................................................................................................................................................27200.0510100000000
.......................................................................................................................................................................................................................................................................................................CTCTACAAACGCATCTGGGAAACC....................................................................................................24200.0510100000000
...........................................................................................................................................................AACACCGCAAAGGAGCACGG....................................................................................................................................................................................................................................................20200.0510100000000
..............................................................................................................................................................................................................................................................................................................................CAGTGCCCAAAAAG--ACGGGGA..............................................................................21200.0510100000000
.............................................................................................................................................................................................TGCC----------------------------------------------------------------------------GGA-----GG--GAAAAGA-CCA...............................................................................................................................19200.0510100000000
....................................................................................................................................................................................................................................................................................................................................................AAGGA----------G--------------------A---------------------------CTAAGTCGGT-CC..19200.0510000100000
.............................................................................................................................................................CACCGCAAAGGAGCACGGCACTCC..............................................................................................................................................................................................................................................24200.0510100000000
......................CT-CCAGTTTTAATA--AGGCTTC.....................................................................................................................................................................................................................................................................................................................................................................................21200.0510001000000
......................................................................................................................................................................................................................................................................................................CCTCTACAAACGCATCTGGGAAACCAGT.................................................................................................28200.0510100000000
.....TGG-AT-ACCTGCCGACCT-CCAGTTTTAAA...............................................................................................................................................................................................................................................................................................................................................................................................28200.0510100000000
..................................................................................................................................................................................................................................................................................................................................GCCCAAAAAG--ACGGGGAAGGA----------G--------------------A---------------------------CT.............25200.0510100000000
.............................................................................................................................................................CACCGCAAAGGAGCACGGCACTCCTCC...........................................................................................................................................................................................................................................27200.0510100000000
...................................................................................................................................................................................................................................................................................................ATCCCTCTACAAACGCATCT............................................................................................................20200.0510100000000
..........................................................................................................................................................................................AAGTGCC----------------------------------------------------------------------------GGA-----GG--GAAAAGA-TAT...............................................................................................................................22200.0510100000000
...TCTGG-AT-ACCTGCCGACCT-..........................................................................................................................................................................................................................................................................................................................................................................................................19200.0510100000000
....................................................................................................................................................................................................................................................................................................................................................AAGGA----------G--------------------A---------------------------CTAAGTCGGT-CA..19200.0510100000000
....................................................................................................................................................................................................................................................................................................TCCCTCTACAAACGCATCTGG..........................................................................................................21200.0510100000000
.....................................................................................................................................................................................TCCTAAAGTGCC----------------------------------------------------------------------------GGA-----GG--GAAAAGA-CCA...............................................................................................................................27200.0510100000000
......................................................................................................................................................................................................................................................................................................................................AAAAAG--ACGGGGAAGGA----------G--------------------A---------------------------C..............20200.0510100000000
................................................................................................................................................................................ACTCCTCCTAAAGTGCC----------------------------------------------------------------------------GGA-----GG--GA........................................................................................................................................24200.0510100000000
.......................................................................................................................................................................................................................................................................................................CTCTACAAACGCATCTGGG.........................................................................................................19200.0510100000000
......................................................................................................................................................................................................................................................................................................................TGGGAAACCAGTGCCCAAAAAG--AC...................................................................................24200.0510010000000
........................................................................................................................................................................................................................................................................................................................................AAAG--ACGGGGAAGGA----------G--------------------A---------------------------CT.............19200.0510100000000
....................ACCT-CCAGTTTTAATA--AGGCT.......................................................................................................................................................................................................................................................................................................................................................................................21200.0510100000000
.....................................................................................................................................................................................................................................................................................................................................................AGGA----------G--------------------A---------------------------CTAAGTCGGT-CCAA20200.0510100000000
.......................................................................................................................................................AAAAAACACCGCAAAGGAGCACG.....................................................................................................................................................................................................................................................23200.0510100000000
..............................TTTAATA--AGGCTTCCCGG.................................................................................................................................................................................................................................................................................................................................................................................18200.0510100000000
.........................................................................................................................................................AAAACACCGCAAAGGAGCACGGC...................................................................................................................................................................................................................................................23200.0510100000000
.......................................................................................................................................................................................................................................................................................................................................AAAAG--ACGGGGAAGGA----------G--------------------A---------------------------CT.............20200.0510100000000
.....................................................................................................................................................................................................................................................................................................................................CAAAAAG--ACGGGGAAGGA----------G--------------------A---------------------------...............20200.0510100000000
......................................................................................................................................................................................................................................................................................................................................................GGA----------G--------------------A---------------------------CTAAGTCGGT-CCC.18200.0510100000000
.....TGG-AT-ACCTGCCGACCT-CCAGTTTTA.................................................................................................................................................................................................................................................................................................................................................................................................26200.0510100000000
........................................................................................................................................................................................................................................................................................................TCTACAAACGCATCTGGGAAACCA...................................................................................................24200.0510100000000
..........................................................................................................................................................AAACACCGCAAAGGAGCACG.....................................................................................................................................................................................................................................................20200.0510100000000
........................................................................................................................................................................................TAAAGTGCC----------------------------------------------------------------------------GGA-----GG--GAAAAGA-CCATC.............................................................................................................................26200.0510100000000
........................................................................................................................................................AAAAACACCGCAAAGGAGCAC......................................................................................................................................................................................................................................................21200.0510001000000
............................................................................................................................................................ACACCGCAAAGGAGCACGGCACTC...............................................................................................................................................................................................................................................24200.0510100000000
................................................................................................................................................................................................................................................................................................................................GTGCCCAAAAAG--ACGGGG...............................................................................18200.0510100000000
..................................................................................................................................................................CAAAGGAGCACGGCACTCC..............................................................................................................................................................................................................................................19200.0510100000000
.................................................................................................................................................................................................................................................................................................................................TGCCCAAAAAG--ACGGGGAAGGA----------G--------------------A---------------------------CA.............26200.0510100000000
...........................................................................................................................................................................................................................................................................................................................................G--ACGGGGAAGGA----------G--------------------A---------------------------CTAAG..........19200.0510100000000
........................................................................................................................................................................................................................................................................................................TCTACAAACGCATCTGGGAAAC.....................................................................................................22200.0510100000000
.............................................................................CTAAC-CCCTTCCCGCCTACTCGTGG............................................................................................................................................................................................................................................................................................................................25200.0510100000000
...............................................................................................................................................................................................................................................................................................................................................CGGGGAAGGA----------G--------------------A---------------------------CTAAGTCGGT-CC..24200.0510000001000
..............................................................................................................................................................................................................................................................................................GA-CCATCCCTCTACAAACGCA...............................................................................................................21200.0510100000000
.......................................................................................................................................................................................................................................................................................................................................AAAAG--ACGGGGAAGGA----------G--------------------A---------------------------C..............19200.0510000010000
.....TGG-AT-ACCTGCCGACCT-CCAGTA....................................................................................................................................................................................................................................................................................................................................................................................................23200.0510100000000
.....................................................................................................................................................................................TCCTAAAGTGCC----------------------------------------------------------------------------GGA-----GG--GAAAAGA-..................................................................................................................................24200.0510100000000
.............................................................................................................................................................CACCGCAAAGGAGCACGGCACT................................................................................................................................................................................................................................................22200.0510100000000
....................................................................................CCTTCCCGCCTACTCGTGGGA-.........................................................................................................................................................................................................................................................................................................................21200.0510100000000
........................................................................................................................................................................................................................................................................................................TCTACAAACGCATCTGGGAAACC....................................................................................................23200.0510100000000
..............................................................................................................................................................................................................................................................................................................................CAGTGCCCAAAAAG--ACGGGGAAGG...........................................................................24200.0510100000000
...........................................................................................................................................................AACACCGCAAAGGAGCACGGCAC.................................................................................................................................................................................................................................................23200.0510100000000
droPer2
A-CTCTGG-AT-ACCTGCCGACCT-CCAGTTTTAATA--AGGCTTCCCGGGACAC-GCGGG-CTATGCCCCGGGCGACTAAC-CCCTTCCCGCCTACTCGTGGGA-TCAAATAT--G---CTA--AATTTTAATATCAAA---------ACAAAAAACACCGCAAAGGAGCACGGCACTCCTCCTAAAGTGCC----------------------------------------------------------------------------GGA-----GG--GAAAAGA-CCATCCCTCTACAAACGCATCTGGGAAACCAGTGCCCAAAAAG--ACGGGGAAGGA----------G--------------------A---------------------------CTAAGTCGGT-CCACSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.....................................................................................................................................................................................................................................................................................................................................................AGGA----------G--------------------A---------------------------CTAAGTCGGT-CC..18202.05413470000
..................................................................................................................................................................................................................................................................................................CATCCCTCTACAAACGCATCTGGG.........................................................................................................24201.70340331000
..................................................................................................................................................................................................................................................................................................CATCCCTCTACAAACGCATCTGGGA........................................................................................................25201.15234190000
..................................................................................................................................................................................................................................................................................................CATCCCTCTACAAACGCATCTG...........................................................................................................22200.95190190000
...................................................................................................................................................................................................................................................................................................ATCCCTCTACAAACGCATCTGG..........................................................................................................22200.408080000
..................................................................................................................................................................................................................................................................................................CATCCCTCTACAAACGCATCTGGGAA.......................................................................................................26200.408080000
..................................................................................................................................................................................................................................................................................................CATCCCTCTACAAACGCATCTGGGAAA......................................................................................................27200.357070000
......................CT-CCAGTTTTAATA--AGGCTTCCCGGG................................................................................................................................................................................................................................................................................................................................................................................26200.357070000
.....................................................................................................................................................................................................................................................................................................................................................AGGA----------G--------------------A---------------------------CTAAGTCGGT-CCAC20200.306060000
.................................................................................................................................................................................................................................................................................................................................TGCCCAAAAAG--ACGGGGAAGGA----------G--------------------A---------------------------C..............25200.204040000
......................CT-CCAGTTTTAATA--AGGCTTCCC...................................................................................................................................................................................................................................................................................................................................................................................23200.204040000
..............................................................................................................................................................ACCGCAAAGGAGCACGGC...................................................................................................................................................................................................................................................18200.153030000
.............................................................................................CTACTCGTGGGA-TCAAATAT--G---C..........................................................................................................................................................................................................................................................................................................22200.153300000
......................CT-CCAGTTTTAATA--AGGCTTCCCG..................................................................................................................................................................................................................................................................................................................................................................................24200.153030000
......................CT-CCAGTTTTAATA--AGGCTTCC....................................................................................................................................................................................................................................................................................................................................................................................22200.153030000
.................................................................................................................................................................................................................................................................................................................................TGCCCAAAAAG--ACGGGGAAGGA----------G--------------------A---------------------------...............24200.102020000
..................................................................................................................................................................................................................................................................................................CATCCCTCTACAAACGCATCTGGGAAAC.....................................................................................................28200.102020000
...................................................................................................................................................................................................................................................................................................ATCCCTCTACAAACGCATCTGGGA........................................................................................................24200.102020000
..................................................................................................................................................................................................................................................................................................CATCCCTCTACAAACGCATC.............................................................................................................20200.102020000
....................................................CAC-GCGGG-CTATGCCCCGGGCGT......................................................................................................................................................................................................................................................................................................................................................23200.102020000
..........T-ACCTGCCGACCT-CCAGTTTTAATA--AGGC........................................................................................................................................................................................................................................................................................................................................................................................29200.102200000
...............................................................................................................................................................................................................................................................................................................................AGTGCCCAAAAAG--ACGGGGAAGGA----------G--------------------T---------------------------...............26200.051010000
........................................................................................................................................................................................................................................................................................................TCTACAAACGCATCTGGGA........................................................................................................19200.051010000
..CTCTGG-AT-ACCTGCCGAC.............................................................................................................................................................................................................................................................................................................................................................................................................18200.051010000
..................................................................................................................................................................................................................................................................................................CATCCCTCTACAAACGCATCTGGGT........................................................................................................25200.051010000
....................................................................................................................................................................................................................................................................................................TCCCTCTACAAACGCATCTGGGAA.......................................................................................................24200.051010000
..............................................................................................TACTCGTGGGA-TCAAATAT--G---...........................................................................................................................................................................................................................................................................................................20200.051100000
..................................................................................................................................................................................................................................................................................................CATCCCTCTACAAACGCATCTGGGAAAAA....................................................................................................29200.051010000
.................................................................................................................................................................................CTCCTCCTAAAGTGCC----------------------------------------------------------------------------GGA-----GG--GAAA......................................................................................................................................25200.051010000
...............................................................................................................................................................CCGCAAAGGAGCACGGCACTC...............................................................................................................................................................................................................................................21200.051001000
....................................................CAC-GCGGG-CTATGCCCCGGGCGACTA...................................................................................................................................................................................................................................................................................................................................................26200.051010000
....................................................CAC-GCGGG-CTATGCCCCGGGCGAC.....................................................................................................................................................................................................................................................................................................................................................24200.051010000
..........................................................................................CGCCTACTCGTGGGA-TCAAATAT--G---C..........................................................................................................................................................................................................................................................................................................25200.051010000
...................................................................................................................................................................................................................................................................................................................................................GAAGGA----------G--------------------A---------------------------CTAAGTCGGT-CC..20200.051010000
..................................................................................................................................................................................TCCTCCTAAAGTGCC----------------------------------------------------------------------------GGA-----GG--GAAAAGA-C.................................................................................................................................28200.051010000
.................................................................................................................................................................................................................................................................................................................................TGCCCAAAAAG--ACGGGGAAGGA----------................................................................22200.051010000
.................................................................................................................................................................................................................................................................................................................................TGCCCAAAAAG--ACGGGGAAGGA----------G--------------------A---------------------------CA.............26200.051010000
...........................................................................................................................................A---------ACAAAAAACACCGCAAAGGAGCACGG....................................................................................................................................................................................................................................................27200.051010000
......................................................................................................................................................................................................................................................................................................................................................GGA----------G--------------------A---------------------------CTAAGTCGGT-CCAC19200.051010000
......................CT-CCAGTTTTAATA--AGGCTTC.....................................................................................................................................................................................................................................................................................................................................................................................21200.051010000
........................................................................................................................................................................................TAAAGTGCC----------------------------------------------------------------------------GGA-----GG--GAAAAGA-CCATC.............................................................................................................................26200.051010000
.....................................................................................................................................................................................................................................................................................................................................................AGGA----------G--------------------A---------------------------CTAAGTCGGT-CA..18200.051100000
................................................................................................................................................................................ACTCCTCCTAAAGTGCC----------------------------------------------------------------------------GGA-----C.............................................................................................................................................21200.051010000
.........................................................................................CCGCCTACTCGTGGGA-TCAAAT...................................................................................................................................................................................................................................................................................................................22200.051100000
.....................................................................................................................................................ACAAAAAACACCGCAAAGGAGCACG.....................................................................................................................................................................................................................................................25200.051010000
......................CT-CCAGTTTTAATA--AGGCTTCCCGGC................................................................................................................................................................................................................................................................................................................................................................................26200.051010000
...................................................................................................................................................................................................................................................................................................ATCCCTCTACAAACGCATCTGGGAA.......................................................................................................25200.051010000
...........................................................................................................................................................................................................................................................................................AAAGA-CCATCCCTCTACAAACGCA...............................................................................................................24200.051010000
......................................................................................................................................................................................CCTAAAGTGCC----------------------------------------------------------------------------GGA-----GG--GAAAAGA-CC................................................................................................................................25200.051010000
droWil2
T-GTGTGC-AA-AAACGAAAACT---------------------------------------------------------------------------------------------------------AGC---------AACAACAACAACAAAAAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
No Reads
droVir3
A-AAGCCC-GT-AAATG-----------------------------------------------------------------------------------------------------------------------------------------------------GGAGTACGGG----------------------------------------------------------------------------------------------------------------TCTGCGAATCTACG------------------------------------GGAATGCGACTAAGGCTCAG-----------------------------------------------------------AGSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
No Reads
droMoj3
C-CAA-----------------------------------------------------------------------------------------------------------------------------A---------AACAACAGCAGCAAAAAT---------------------------------------------------------------------------------------ATCAGAAAATAA------------------------------------------------------------------------AAGACACCAGGGC-------------------------------------------------------AGTC------------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads
droGri2
A-CTCTGG-AT-ATCTGCTGACCT-TCAGTTTC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/18/2015 at 03:52 AM