ID:

dan_2046

 Coordinate:

scaffold_13266:16290046-16290268 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-26.4 -26.1 -26.1

Flybase annnotation

CDS [Dana\GF13658-cds]; CDS [Dana\GF13658-cds]; exon [dana_GLEANR_13665:6]; exon [dana_GLEANR_13665:7]; intron [Dana\GF13658-in]

No Repeatable elements found

Sense Strand Reads

##################################################-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
TTTCTTCTACCAGTTCGGTCTGGGCCCCATCCCCTACTTTATTGGAGCAGGTAATTGAAAGTCGCGTGACTATTATTTATACGCATTCTTTGGACTCTAGTGCTCGTGACTGGGCCAGCTGCTCAAGTTTCGGCGAACTGGACCCGATATAGAATGGGGTTCATTGGCACGCCGTCTCCAGACAGACTGTCGTATTGCTGACGCAATATAATTGGACGATTGTTTTTATTTATATCCCATGAACTGACTTTGATTATGCTTTTCAATTTGCAGAACTGTTCGAAGTGGCGCCCCGCTCCGTGGCCATGTCGATGGGCAGTCTG
*****************************************************************************......((((((((((..((((((((.((.((((((((.....))))).))).))))..)))))).))))...)))))).................****************************************************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M044
female body
 M058
embryo
 V039
embryo
 V106
head
 V105
male body		 V055
head
.....................................................................................................................................................TAGAATGGGGTTCATTGGCACGCC...................................................................................................................................................... 24 0 1 9.00 9 0 8 1 0 0 0
.............................................................................TATACGCATTCTTTGGACTCTAGTGC............................................................................................................................................................................................................................ 26 0 1 6.00 6 3 3 0 0 0 0
..........................................................................................................................TCAAGTTTCGGCGAACTGGACCCGA................................................................................................................................................................................ 25 0 1 6.00 6 0 6 0 0 0 0
..........................................................................................................................TCAAGTTTCGGCGAACTGGACCC.................................................................................................................................................................................. 23 0 1 5.00 5 2 3 0 0 0 0
.......................................................................................CTTTGGACTCTAGTGCTCGTGACTG................................................................................................................................................................................................................... 25 0 1 4.00 4 3 0 1 0 0 0
.....................................................................................................................................................TAGAATGGGGTTCATTGGCACGC....................................................................................................................................................... 23 0 1 3.00 3 0 3 0 0 0 0
...................................................................................................................................................TATAGAATGGGGTTCATTGGCACGC....................................................................................................................................................... 25 0 1 3.00 3 1 2 0 0 0 0
........................................................................................TTTGGACTCTAGTGCTCGTGACTG................................................................................................................................................................................................................... 24 0 1 2.00 2 2 0 0 0 0 0
.....................................................................................................................................................TAGAATGGGGTTCATTGGCACG........................................................................................................................................................ 22 0 1 2.00 2 1 1 0 0 0 0
.....................................................................................TTCTTTGGACTCTAGTGCTCGTGACTG................................................................................................................................................................................................................... 27 0 1 2.00 2 2 0 0 0 0 0
.......................................................................................CTTTGGACTCTAGTGCTCGTGACTGG.................................................................................................................................................................................................................. 26 0 1 2.00 2 2 0 0 0 0 0
.......................................................................................................................................................................................................................................................................................TCGAAGTGGCGCCCCGCTCCGTGGCCA................. 27 0 1 2.00 2 1 1 0 0 0 0
............................................................................................GACTCTAGTGCTCGTGACTGGGCC............................................................................................................................................................................................................... 24 0 1 2.00 2 0 2 0 0 0 0
TTTCTTCTACCAGTTCGGTCTGGGC.......................................................................................................................................................................................................................................................................................................... 25 0 1 2.00 2 0 2 0 0 0 0
................................................................................................................................................................................TCCAGACAGACTGTCGTATTGCTGACG........................................................................................................................ 27 0 1 2.00 2 2 0 0 0 0 0
.....................................................................................TTCTTTGGACTCTAGTGCTCGTGACC.................................................................................................................................................................................................................... 26 1 1 2.00 2 0 2 0 0 0 0
.TTCTTCTACCAGTTCGGTCTGGGC.......................................................................................................................................................................................................................................................................................................... 24 0 1 2.00 2 2 0 0 0 0 0
............................................................................................................................................................................................................................................................................TGCAGAACTGTTCGAAGTGGCGCC............................... 24 0 1 2.00 2 0 2 0 0 0 0
....................................................................................................................................................ATAGAATGGGGTTCATTGGCACGCCGT.................................................................................................................................................... 27 0 1 2.00 2 0 0 0 2 0 0
.............................................................................................................................................................................................................................................................................................TGGCGCCCCGCTCCGTGGCCATGTCGA........... 27 0 1 2.00 2 2 0 0 0 0 0
.....................................................................................................................GCTGCTCAAGTTTCGGCGAACTGGACC................................................................................................................................................................................... 27 0 1 2.00 2 0 2 0 0 0 0
............................................................................................GACTCTAGTGCTCGTGACTGGGCCAGC............................................................................................................................................................................................................ 27 0 1 2.00 2 2 0 0 0 0 0
.....................................................................................TTCTTTGGACTCTAGTGCTCGTGACTGG.................................................................................................................................................................................................................. 28 0 1 1.00 1 1 0 0 0 0 0
..........................................................................................................................TCAAGTTTCGGCGAACTGGACCCG................................................................................................................................................................................. 24 0 1 1.00 1 0 1 0 0 0 0
..............................................................................................................................GTTTCGGCGAACTGGACCCGA................................................................................................................................................................................ 21 0 1 1.00 1 0 1 0 0 0 0
...................................................................................................................................................................................................................................................................TTTTCAATTTGCAGAACTGTTCGAAGTGG................................... 29 0 1 1.00 1 1 0 0 0 0 0
.....................................................................................TTCTTTGGACTCTAGTGCTCGTGAC..................................................................................................................................................................................................................... 25 0 1 1.00 1 0 1 0 0 0 0
................................................................................................................................................................................TCCAGACAGACTGTCGTATTGCTGACGC....................................................................................................................... 28 0 1 1.00 1 1 0 0 0 0 0
...................................................................................................................................................................................................................................................................................................CCCGCTCCGTGGCCATGTCGATGGGCA..... 27 0 1 1.00 1 1 0 0 0 0 0
.....................................................................................................................................................................................................................................................................................................CGCTCCGTGGCCATGTCGATGGGC...... 24 0 1 1.00 1 1 0 0 0 0 0
TTTCTTCTACCAGTTCGGTCTG............................................................................................................................................................................................................................................................................................................. 22 0 1 1.00 1 1 0 0 0 0 0
..................................TACTTTATGGGAGCAGGTAATTGA......................................................................................................................................................................................................................................................................... 24 1 1 1.00 1 1 0 0 0 0 0
........ACCAGTTCGGTCTGGGCCCCATCC................................................................................................................................................................................................................................................................................................... 24 0 1 1.00 1 1 0 0 0 0 0
....................................................................................................TGCTCGTGACTGGGCCAGCTGCTCAA..................................................................................................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0
.............................................................................................................................................................................................................................................................................................TTGCGCCCCGCTCCGTGGCCATGT.............. 24 1 1 1.00 1 0 1 0 0 0 0
.........................................................................................TTGGACTCCAGTGCTCGTGACTGGG................................................................................................................................................................................................................. 25 1 1 1.00 1 1 0 0 0 0 0
...CTTCTACCAGTTCGGTCTGGGC.......................................................................................................................................................................................................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0 0
........................................................................................................................GCTCAAGTTTCGGCGAACTGGACCC.................................................................................................................................................................................. 25 0 1 1.00 1 0 1 0 0 0 0
.................................................................................................................................................................................................................................TTATTTATATCCCATGAACTGACTT......................................................................... 25 0 1 1.00 1 1 0 0 0 0 0
.........................................................................................TTGGACTCTAGTGCTCGTGACTGG.................................................................................................................................................................................................................. 24 0 1 1.00 1 0 1 0 0 0 0
.......TACCAGTTCGGTCTGGGCCCCATCC................................................................................................................................................................................................................................................................................................... 25 0 1 1.00 1 0 1 0 0 0 0
.....................................................................................................................................................TAGAATGGGGATCATTGGCACGCCGC.................................................................................................................................................... 26 2 1 1.00 1 0 1 0 0 0 0
................................................................................................................................................................................TCCAGACAGACTGTCGTATTGCTTACGCA...................................................................................................................... 29 1 1 1.00 1 1 0 0 0 0 0
......................................................................................................................................................................................CAGACTGTCGTATTGCTGAC......................................................................................................................... 20 0 1 1.00 1 0 1 0 0 0 0
...................................................................................................................................................................................................................................................................................................CCCGCTCCGTGGCCATGTCGATGGG....... 25 0 1 1.00 1 1 0 0 0 0 0
.........................................................................................TTGGACTCTAGTGCTCGTGACTGGG................................................................................................................................................................................................................. 25 0 1 1.00 1 1 0 0 0 0 0
.TTCTTCTACCAGTTCGGTCTGGGCCCC....................................................................................................................................................................................................................................................................................................... 27 0 1 1.00 1 1 0 0 0 0 0
.....................................................................................................................................................TAGAATGGCGTTCATTGGCACGCCGTC................................................................................................................................................... 27 1 1 1.00 1 1 0 0 0 0 0
..........................................................................................................................TCAAGTTTCGGCGAACTGGACC................................................................................................................................................................................... 22 0 1 1.00 1 0 1 0 0 0 0
....................................................................................................................................................ATAGAATGGGGTTCATTGGCACGC....................................................................................................................................................... 24 0 1 1.00 1 1 0 0 0 0 0
.......................................................................................................................................................................................................................................................................................................CTCCGTGGCCATGTCGATGGG....... 21 0 1 1.00 1 0 1 0 0 0 0
...............................................................................................................................................................................................................................................................................................GCGCCCCGCTCCGTGGCCATGTCGA........... 25 0 1 1.00 1 1 0 0 0 0 0
......................................................................................................................................................................................................................................................................................................GCTCCGTGGCCATGTCGATGTGCA..... 24 1 1 1.00 1 0 0 1 0 0 0
..........................................................................................................................................................................................................................................................................TTTGCAGAACTGTTCGAAGTGGCGC................................ 25 0 1 1.00 1 0 1 0 0 0 0
.............................................................................TAGACGCATTCTTTGGACGCTAGTGC............................................................................................................................................................................................................................ 26 2 1 1.00 1 0 0 1 0 0 0
.......................................................................................CTTTGGACTCTAGTGCTCGTGACTGGT................................................................................................................................................................................................................. 27 1 1 1.00 1 1 0 0 0 0 0
.........................................................................................TTGGACTCTAGTGCTCGTGACTGGGC................................................................................................................................................................................................................ 26 0 1 1.00 1 1 0 0 0 0 0
...................................................................................................................................................TATAGAATCGGGGTCATTGGCAC......................................................................................................................................................... 23 2 1 1.00 1 1 0 0 0 0 0
.TTCTTCTACCAGTTCGGTCTGGGCCCCA...................................................................................................................................................................................................................................................................................................... 28 0 1 1.00 1 1 0 0 0 0 0
.............................................................................................................................................................................................................................................................TTATGCTTTTCAATTTGCAGAACTGT............................................ 26 0 1 1.00 1 1 0 0 0 0 0
........................................................................................................................................................................................................................................................................................................TCCGTGGCCATGTCGATGGGCAG.... 23 0 1 1.00 1 0 1 0 0 0 0
................................................................................................................................................................................................................................................................TGCTTTTCAATTTGCAGAACTGTTCGAA....................................... 28 0 1 1.00 1 0 1 0 0 0 0
............................................................................................GACTCTAGTGCTCGTGACTGGGCCAG............................................................................................................................................................................................................. 26 0 1 1.00 1 1 0 0 0 0 0
..............TCGGTCTGGGCCCCATCCCCTACC............................................................................................................................................................................................................................................................................................. 24 1 1 1.00 1 0 1 0 0 0 0
........................................................................................................................................................................................................................................................................................................TCCGTGGCGATGTCGATGGGCAGTCTG 27 1 1 1.00 1 1 0 0 0 0 0
................................................................................................................................................................................................................................................................TGCTTTTCAATTTGCAGAACTGTTCGA........................................ 27 0 1 1.00 1 0 1 0 0 0 0
.........................................................................................................................................................................................................................................................................................TAAGTGGCGCCCCGCTCCGTGGCCATT............... 27 2 1 1.00 1 0 1 0 0 0 0
......................................................................................................................................................................................................................................................................................TTCGAAGTGGCGCCCCGCTCCGTGG.................... 25 0 1 1.00 1 1 0 0 0 0 0
.TTCTTCTACCAGTTCGGTCTGGGCC......................................................................................................................................................................................................................................................................................................... 25 0 1 1.00 1 0 1 0 0 0 0
.....................................................................................................................................................TAGAATGGGGTTCATTGGTACGCC...................................................................................................................................................... 24 1 1 1.00 1 0 1 0 0 0 0
.....................................................................................................................GCTGCTCAAGTTTCGGCGAACTGGA..................................................................................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0 0
..........................................................................................TGGACTCTAGTGCTCGTGACTG................................................................................................................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0 0
.....................................................................................................................................................TAGAATGGGGTTCATTGGCACGCCG..................................................................................................................................................... 25 0 1 1.00 1 0 1 0 0 0 0
................................................................................................................................................................................TCCAGACAGACTGTCGTATTGCTGAC......................................................................................................................... 26 0 1 1.00 1 0 1 0 0 0 0
..........CAGTTCGGTCTGGGCCCCATCCCCTACTT............................................................................................................................................................................................................................................................................................ 29 0 1 1.00 1 1 0 0 0 0 0
.......................................................................................................................TGCTCAAGTTTCGGCGAACTGGACCCGA................................................................................................................................................................................ 28 0 1 1.00 1 1 0 0 0 0 0
.....................................................................................................................................................TAGAATGGGGTTCATTGGCACGCCGC.................................................................................................................................................... 26 1 1 1.00 1 0 1 0 0 0 0
.......................................................................................................................................................................................................................................................................................TCGAAGTGGCGCCCCGCTCCGTGGCCATG............... 29 0 1 1.00 1 1 0 0 0 0 0
.............................................................................................................................................................................................................................................................................GCAGAACTGTTCGAAGTGGCGCCCCGC........................... 27 0 1 1.00 1 1 0 0 0 0 0
.....................................................................................................................................................TAGAATGGGGTTCATTGGCACGCCGTT................................................................................................................................................... 27 1 1 1.00 1 1 0 0 0 0 0
.....................................................................................................................................................TAGAATGGGGTTCATTGGCACGCCGT.................................................................................................................................................... 26 0 1 1.00 1 0 1 0 0 0 0
...........AGTTCGGTCTGGGCCCCATCCCC................................................................................................................................................................................................................................................................................................. 23 0 1 1.00 1 1 0 0 0 0 0
....................................................................................................................................................................................GACAGACTGTCGTATTGCTGACGCAA..................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0
.................................................................................................................................................................................................................................TTATTTATATCCCATGAACTGACTTTG....................................................................... 27 0 1 1.00 1 1 0 0 0 0 0
...........................................................................................GGACTCTAGTGCTCGTGACTGGGC................................................................................................................................................................................................................ 24 0 1 1.00 1 0 1 0 0 0 0
..........................................................................................................................................................................................................................................................................TTTGCAGCACTGTTCGAAGTGGCGCCC.............................. 27 1 1 1.00 1 0 1 0 0 0 0
.........................................................................................................................................................................................ACTGTCGTATTGCTGACGCAATATA................................................................................................................. 25 0 1 1.00 1 1 0 0 0 0 0
.......................................................................................................................TTCTCAAGTTTCGGCGAACTGGACCC.................................................................................................................................................................................. 26 1 1 1.00 1 0 1 0 0 0 0
.................................................................................................................................................................................................................................................................................AACTGTTCAAAGTGGCGCCCCGCTC......................... 25 1 1 1.00 1 0 1 0 0 0 0
.....................................................................................TTCTTTGGGCTCTAGTGCTCGTGACTGG.................................................................................................................................................................................................................. 28 1 1 1.00 1 1 0 0 0 0 0
..........................................................................................................................TCAAGTTTCGGCGAACTGGACCCGATA.............................................................................................................................................................................. 27 0 1 1.00 1 1 0 0 0 0 0
............................................................................................................................AAGTTTCGGCGAACTGGACCCGATA.............................................................................................................................................................................. 25 0 1 1.00 1 1 0 0 0 0 0
..........................................................................................................................TCAAGTTTCGGCGAACTGG...................................................................................................................................................................................... 19 0 1 1.00 1 1 0 0 0 0 0
...................................................................................................................................................................................................TGCTGACGCAATATAATTGGACGAT....................................................................................................... 25 0 1 1.00 1 1 0 0 0 0 0
.......................................................................................................................TGCTCAAGTTTCGGCGAACTGGACCCGAT............................................................................................................................................................................... 29 0 1 1.00 1 0 1 0 0 0 0
......................................................................................................CTCGTGACTGGGCCAGCTGCTT....................................................................................................................................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0
.................................................................................................................................................................................................................................TTATTTATATCCCATGAACTGACTTT........................................................................ 26 0 1 1.00 1 1 0 0 0 0 0
..TCTTCTACCAGTTCGGTCTGGGCCC........................................................................................................................................................................................................................................................................................................ 25 0 1 1.00 1 1 0 0 0 0 0
..................................................................................................................................................................................CAGACAGACTGTCGTATTGCTCACGC....................................................................................................................... 26 1 1 1.00 1 0 0 1 0 0 0
.................................................................................CGCATTCTTTGGACTCTAGTGCTCGTG....................................................................................................................................................................................................................... 27 0 1 1.00 1 1 0 0 0 0 0
................................................................................................................................................................TCATTGGCACGCCGTCTCCAGACAGA......................................................................................................................................... 26 0 1 1.00 1 0 1 0 0 0 0
......................................................................................................................................................................................................................................TATATCCCATGAACTGACTTTGATTA................................................................... 26 0 1 1.00 1 1 0 0 0 0 0
..........................................................................................................TGACTGGGCCAGCTGCTCAAGTTTCGGC............................................................................................................................................................................................. 28 0 1 1.00 1 1 0 0 0 0 0
...CTTTTACCAGTTCGGTCTGGGCC......................................................................................................................................................................................................................................................................................................... 23 1 1 1.00 1 0 1 0 0 0 0
....................................................................................................................AGCTGCTCAAGTTTCGGCGAACTGGACCC.................................................................................................................................................................................. 29 0 1 1.00 1 1 0 0 0 0 0
................................................................................................................................................................................................................................................................................GAACTGTTGGAAGTGGCGCCCCGCTC......................... 26 1 1 1.00 1 1 0 0 0 0 0
.........................................TTGGAGCAGGTAATTGAAAGTCGCGT................................................................................................................................................................................................................................................................ 26 0 1 1.00 1 0 1 0 0 0 0
........................................................................................................................................................................................................................................................................................................TCCGTGGCCATGTCGATGGGCAGTC.. 25 0 1 1.00 1 0 1 0 0 0 0
..............................................................................................................................................................................................................................................................................CAGAACTGTTCGAAGTGGCGCC............................... 22 0 1 1.00 1 0 1 0 0 0 0
................................................................................................................................................................................................................................................................................GGACTGTTCGAAGTGGCGCCC.............................. 21 1 1 1.00 1 0 1 0 0 0 0
....................................................................................................................................................................................................................................TTTATATCCCATGAACTGA............................................................................ 19 0 1 1.00 1 1 0 0 0 0 0
..................................................................................................................................................................................................................................TATTTATATCCCATGAACTGACTTTG....................................................................... 26 0 1 1.00 1 1 0 0 0 0 0
.......................................................................................CTTTGGACTCTAGTGCTCGTGACT.................................................................................................................................................................................................................... 24 0 1 1.00 1 0 1 0 0 0 0
.....................................TTTATTGGAGCAGGTAATTGAAAGTC.................................................................................................................................................................................................................................................................... 26 0 1 1.00 1 0 0 0 1 0 0
.TTCTTCTACCAGTTCGGTCTGG............................................................................................................................................................................................................................................................................................................ 22 0 1 1.00 1 1 0 0 0 0 0
................................................................................................................................................................................TCCAGACAGACTGTCGTATTGCTG........................................................................................................................... 24 0 1 1.00 1 1 0 0 0 0 0
............................................................................................GACTCTAGTGCTCGTGACTGG.................................................................................................................................................................................................................. 21 0 1 1.00 1 1 0 0 0 0 0
...............................................................................................................................................................TTCATTGGCACGCCGTCTCCAG.............................................................................................................................................. 22 0 1 1.00 1 0 0 0 0 1 0
..............................................................................................................................................................................................................................................ATGAACTGACTTTGATTATGC................................................................ 21 0 1 1.00 1 0 1 0 0 0 0
...................................................................................................................CAGCTGCTCAAGTTTCGGCGAACTGGAC.................................................................................................................................................................................... 28 0 1 1.00 1 1 0 0 0 0 0
...........................................................................................................................CAAGTTTCGGCGAACTGGACCCGA................................................................................................................................................................................ 24 0 1 1.00 1 0 1 0 0 0 0
........................................................................................................................................................................................................................................................................................................TCCGTGGCCATGTCGATGGGCAGTCT. 26 0 1 1.00 1 1 0 0 0 0 0
..........................................................................................TGGACTCTAGTGCTCGTGACTGGGG................................................................................................................................................................................................................ 25 1 1 1.00 1 0 1 0 0 0 0
.....................................................................................................................................................TACAATGGGGTTCATTGGCACGCCGT.................................................................................................................................................... 26 1 1 1.00 1 0 1 0 0 0 0
.....................................................................................TTCTTTGGACTCTAGTGCTCGTGTCT.................................................................................................................................................................................................................... 26 1 1 1.00 1 1 0 0 0 0 0
.......................................................................................................................TGCTCAAGTTTCGGCGAACTGGACC................................................................................................................................................................................... 25 0 1 1.00 1 0 1 0 0 0 0
......................................................................................GCTTTGGACCTTAGTGCTC.......................................................................................................................................................................................................................... 19 3 20 0.70 14 0 0 0 14 0 0
......................................................................................GCTTTGGACCCTAGTGCTC.......................................................................................................................................................................................................................... 19 2 3 0.33 1 0 0 0 1 0 0
......................................................................................TCTTTGGACCTTAGTGCTCA......................................................................................................................................................................................................................... 20 3 10 0.20 2 0 0 0 2 0 0
......................................................................................................CTTGTGAGTGGGACAGCTGCT........................................................................................................................................................................................................ 21 3 6 0.17 1 0 0 0 0 0 1
......................................................................................................CTCGTGAGTGTGCCAGCGGCT........................................................................................................................................................................................................ 21 3 6 0.17 1 0 0 0 0 0 1
.................................................................................................................................................................................................................................................................................AACTGTTCGAGGTGGCCCCT.............................. 20 3 6 0.17 1 0 1 0 0 0 0
....................................................................................................................AGCTGCTGAAGTTTAGGC............................................................................................................................................................................................. 18 2 14 0.14 2 0 2 0 0 0 0
..............................................................................................................................GTTTCGGCGAAGTTGACC................................................................................................................................................................................... 18 2 10 0.10 1 0 1 0 0 0 0
............................................................................................................................................................................................................AATAGAATAGGACGTTTGTT................................................................................................... 20 3 12 0.08 1 0 0 0 1 0 0
.............................................................................................................................................................................................................................GTCTTTATTTATAACCCA.................................................................................... 18 2 20 0.05 1 0 0 1 0 0 0
.............................................................................................................................................................................................................TTATAATTGGACGATTTTTTA................................................................................................. 21 3 20 0.05 1 0 0 1 0 0 0
.......................................................................................CTTTGGACCTTAGTGCTCC......................................................................................................................................................................................................................... 19 3 20 0.05 1 1 0 0 0 0 0
.......................................................................................CTTTGGGATCTGGTGCTCGT........................................................................................................................................................................................................................ 20 3 20 0.05 1 0 0 0 0 0 1

Anti-sense strand reads

AAAGAAGATGGTCAAGCCAGACCCGGGGTAGGGGATGAAATAACCTCGTCCATTAACTTTCAGCGCACTGATAATAAATATGCGTAAGAAACCTGAGATCACGAGCACTGACCCGGTCGACGAGTTCAAAGCCGCTTGACCTGGGCTATATCTTACCCCAAGTAACCGTGCGGCAGAGGTCTGTCTGACAGCATAACGACTGCGTTATATTAACCTGCTAACAAAAATAAATATAGGGTACTTGACTGAAACTAATACGAAAAGTTAAACGTCTTGACAAGCTTCACCGCGGGGCGAGGCACCGGTACAGCTACCCGTCAGAC
******************************************************************************************************************************************************......((((((((((..((((((((.((.((((((((.....))))).))).))))..)))))).))))...)))))).................***************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M044
female body
 M058
embryo
 V039
embryo
 V106
head
 V105
male body		 V055
head
.....................................................................................ACGAAACCTGGAATCACGAG.......................................................................................................................................................................................................................... 20 3 9 6.44 58 10 4 0 42 2 0
......................................................................................CGAAACCTGGAATCACGAG.......................................................................................................................................................................................................................... 19 3 20 3.20 64 22 37 0 5 0 0
..........................................................................................................................................................................CGGCAGAGGTCTGTCTGACAGCAT................................................................................................................................. 24 0 1 3.00 3 0 2 1 0 0 0
.....................................................................................................................................................................CCGTGCGGCAGAGGTCTGTCT......................................................................................................................................... 21 0 1 3.00 3 2 1 0 0 0 0
..................................................................................................................................................................................................................................................................................................GGGGCGAGGCACCGGTACAGCTACCCGT..... 28 0 1 2.00 2 2 0 0 0 0 0
......................................................................................................................................................................................................................................................................................................CGAGGCACCGGTACAGCTACCC....... 22 0 1 2.00 2 0 1 1 0 0 0
.......................................................................................GAAACCTGGAATCACGAG.......................................................................................................................................................................................................................... 18 2 2 2.00 4 1 1 2 0 0 0
..............................................CGTCCATTAACTTTCAGCGCACTGAT........................................................................................................................................................................................................................................................... 26 0 1 2.00 2 1 1 0 0 0 0
..............................................................................................................................................GGGCTATATCTTACCCCAAGTAACCGT.......................................................................................................................................................... 27 0 1 2.00 2 1 1 0 0 0 0
.........................................................................................................CACTGACCCGGTCGACGAGTTCAAAG................................................................................................................................................................................................ 26 0 1 2.00 2 1 1 0 0 0 0
.........................................................................................................................................................TACCCCAAGTAACCGTGCGGCAGAGGT............................................................................................................................................... 27 0 1 2.00 2 1 1 0 0 0 0
..................................................................................................................................................................................................................TAACCTGCTAACAAAAATAAATATA........................................................................................ 25 0 1 1.00 1 0 1 0 0 0 0
..........................GGTAGGGGATGAAATAACCTCGT.................................................................................................................................................................................................................................................................................. 23 0 1 1.00 1 1 0 0 0 0 0
....................................................................................................................................................................................................................................................................................................GGCGAGGCACCGGTACAGCTACCCGT..... 26 0 1 1.00 1 0 1 0 0 0 0
.........................................................................................................................................GACCTGGGCTATATCTTACCCC.................................................................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0 0
..........................................................................................................................................................................CGCCAGAGGTCTGTCTAACAGCCT................................................................................................................................. 24 3 1 1.00 1 0 0 1 0 0 0
..........................................................................................................................................................................CGGCAGAGGTCTGTCTGACAGCATAACG............................................................................................................................. 28 0 1 1.00 1 0 1 0 0 0 0
..................................................................................................................................................................................................................CAACCTGCTAACAAAAATAAATATA........................................................................................ 25 1 1 1.00 1 0 1 0 0 0 0
...................GACCCGGGGTAGGGGATGAAATAAC....................................................................................................................................................................................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0 0
...........................................................................................................................................................................GGCAGAGGTCTGTCTGACAGCA.................................................................................................................................. 22 0 1 1.00 1 1 0 0 0 0 0
....................................................................................................................................................................................................................................................................................................GGCGAGGCACCGGTACACCTACCCGT..... 26 1 1 1.00 1 1 0 0 0 0 0
..............................................................................................................ACCCGGTCGACGAGTTCAAAGCCGCT........................................................................................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0
.............................................................................................................................................................................CAGAGGTCTGTCTGACAGCATAATGAC........................................................................................................................... 27 1 1 1.00 1 0 1 0 0 0 0
......................................................................................................................................................................................................................................................................................................CGAGGCACCGGTACAGCTACCCG...... 23 0 1 1.00 1 0 1 0 0 0 0
.....................................................................................................................................................................CCGTGCGGCAGAGGTCTGTGT......................................................................................................................................... 21 1 1 1.00 1 0 1 0 0 0 0
..........................................................................................................................................................................................................................................AGGGTACTTGACTTAAACTAATACGA............................................................... 26 1 1 1.00 1 0 0 1 0 0 0
........................................................................................................TCACTGACCCGGTCGACGAGTTCAAAG................................................................................................................................................................................................ 27 1 1 1.00 1 0 1 0 0 0 0
.....................................................................................................................................................................................................................................................................AAGTTAAACGTCTTGACAAGCTTCAC.................................... 26 0 1 1.00 1 1 0 0 0 0 0
.............................................................................................................................................................................................................................................GTACTTGACTGAAACTAATACGA............................................................... 23 0 1 1.00 1 0 1 0 0 0 0
.............................................................................................................................................................................................................................................................................................CCCGCGGGGCGAGGCACCGGTACGG............. 25 2 1 1.00 1 0 1 0 0 0 0
.................................................................................................................................................................GTAACCGTGCGGCAGAGGTCTGTCT......................................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0 0
.......................................................................................................AGCACTGACCCGGTCGACGAGTTC.................................................................................................................................................................................................... 24 0 1 1.00 1 0 1 0 0 0 0
...............................................................................................................CCCGGTCGACGAGTTCAAAGCCTC............................................................................................................................................................................................ 24 1 1 1.00 1 0 1 0 0 0 0
....................................................................................................................................CGCTTGACCTGGGCTATATCTT......................................................................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0 0
....................................................................................................................................CGCTTGACCTGGGCTATATCTTACC...................................................................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0 0
..............................................................................................................ACCCGGTCGACGAGTTCAAAG................................................................................................................................................................................................ 21 0 1 1.00 1 1 0 0 0 0 0
............................................................................................................................................................................................................................................................................................CACCGCGGGGCGAGGCACCGG.................. 21 0 1 1.00 1 1 0 0 0 0 0
....................................................................................................................................................................................................................................................................................................GGCGAGGCGCCGGTACAGCTA.......... 21 1 1 1.00 1 0 0 0 1 0 0
....................................................................................................................................................................................CTGTCTGACAGCATAACGACTGCGTT..................................................................................................................... 26 0 1 1.00 1 0 1 0 0 0 0
.....................................................................................................................................GCTTCACCTGGGCTATAGCTTACCCC.................................................................................................................................................................... 26 2 1 1.00 1 1 0 0 0 0 0
..........GTCAAGCCAGACCCGGGGTAGGGGAT............................................................................................................................................................................................................................................................................................... 26 0 1 1.00 1 0 0 1 0 0 0
.............AAGCCAGACCCGGGGTAGGGGAT............................................................................................................................................................................................................................................................................................... 23 0 1 1.00 1 0 0 0 0 1 0
..........................................................................................................................................................................CGTCAGCGGTCTGTCTGACAGCCT................................................................................................................................. 24 3 1 1.00 1 0 0 1 0 0 0
...................................................................................................................................................................................................................................................................................................GGGCGAGGCACCGGTACAGCTACCCG...... 26 0 1 1.00 1 1 0 0 0 0 0
............................................................................................................................................................CCCAAGTAACCGTGCGGCAGAGGT............................................................................................................................................... 24 0 1 1.00 1 1 0 0 0 0 0
.................................................................................................................................................................................................................TTAACCTGCTAACAAAAATAA............................................................................................. 21 0 1 1.00 1 1 0 0 0 0 0
.....................................................................................................................................GCTTGACCTGGGCTATATCTTACCCC.................................................................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0
...............................................................................................................CCCGGTCGACGAGTTCAAAGCCGCT........................................................................................................................................................................................... 25 0 1 1.00 1 0 1 0 0 0 0
.........................................................................................................................................................TACCCCAAGTAACCGTGCGGC..................................................................................................................................................... 21 0 1 1.00 1 0 1 0 0 0 0
.....................................................................................................................................................................CCGTGCGGCAGAGGTCTGTCG......................................................................................................................................... 21 1 1 1.00 1 0 1 0 0 0 0
.........................................................................................................................................................................................................................................................................................CTTCACCGCGGGGCGAGGCACCGGT................. 25 0 1 1.00 1 0 0 1 0 0 0
...................................................................................................................................CCGCTTGACCTGGGCTATATCTTACCCC.................................................................................................................................................................... 28 0 1 1.00 1 1 0 0 0 0 0
.........GGTCAAGCCAGACCCGGGGTAGGGGAT............................................................................................................................................................................................................................................................................................... 27 0 1 1.00 1 1 0 0 0 0 0
...............................................................................................AGATCACGAGCACTGACCCGGTCGAC.......................................................................................................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0
...................................................................................................................................................................................................................................................................................................GGGCGAGGCACCGGTACACCTACCCGT..... 27 1 1 1.00 1 1 0 0 0 0 0
...........................................CCTCGTCCATTAACTTTCAGCGCACT.............................................................................................................................................................................................................................................................. 26 0 1 1.00 1 0 1 0 0 0 0
........................................................................................................................................................................................................................................................................................................AGGCACCGGTACAGCTACCCGTCAG.. 25 0 1 1.00 1 0 0 1 0 0 0
.....................................................................................................................................................................................................................................................................................................GCGAGGCACCGGTACAGCTACCC....... 23 0 1 1.00 1 1 0 0 0 0 0
.......................CGGGGTAGGGGATGAAATAAC....................................................................................................................................................................................................................................................................................... 21 0 1 1.00 1 0 1 0 0 0 0
...................................................................................................................................................................................................................................................................................................GGGCGAGGCACCGGTACAGCTAC......... 23 0 1 1.00 1 1 0 0 0 0 0
................................................................................................................CCGGTCGACGAGTTCAAAGC............................................................................................................................................................................................... 20 0 1 1.00 1 0 1 0 0 0 0
....................................................................................AAAGAAACCTGGAATCACGAG.......................................................................................................................................................................................................................... 21 3 2 0.50 1 0 0 0 1 0 0
.....................................................................................................................................................................................................................................................................................................GCGAGGCACCGGTACAGCGA.......... 20 1 2 0.50 1 0 1 0 0 0 0
.....................................................................................ACGAAACCTGGGATCACGAG.......................................................................................................................................................................................................................... 20 2 2 0.50 1 1 0 0 0 0 0
........................................................................................................................................................................................................................................ATAGGGTACGTGACTGATA........................................................................ 19 2 2 0.50 1 0 0 0 0 0 1
.....................................................................................AAGAAACCTGGAATCACGAGT......................................................................................................................................................................................................................... 21 3 3 0.33 1 0 0 0 0 1 0
......................................................................................CGAAACCTGGGATCACGAG.......................................................................................................................................................................................................................... 19 2 3 0.33 1 0 0 0 1 0 0
.....................................................................................CAGAAACCTGGAATCACGAG.......................................................................................................................................................................................................................... 20 3 8 0.13 1 1 0 0 0 0 0
....................................................................TGTTAATGAAGATGCGTAAG........................................................................................................................................................................................................................................... 20 3 10 0.10 1 0 0 0 0 0 1
...............................................................................ATGCGGACGAAACCTGTGA................................................................................................................................................................................................................................. 19 3 16 0.06 1 1 0 0 0 0 0
........................GAGGAAGGGGATGACATAAC....................................................................................................................................................................................................................................................................................... 20 3 20 0.05 1 0 0 0 0 0 1
...........................................................................................................................................................TCCCAAGTCACCGAGCGGC..................................................................................................................................................... 19 3 20 0.05 1 0 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droAna3 scaffold_13266:16289996-16290318 + dan_2046 TTTCTTCTACCAGTTCGGTCTGGGCCCCATCCCCTACTTTATTGGAGCAGGTA--ATTGAA-------A------------GTCGCGTGACT--ATTATTTATACGCATTCTTTGGACTCT-------------AGTGCTCGTGACTGGGCCAGCTGC-TCAAGTTTCGGCGAACTG-----------------GACCCGATATAGAATG-GGGTTCATTGGCAC-GC------------------------------------------------CGT-CTCCAGACAGACTGTCGT--ATTGCTGACGCAATATAATTGGACGATTGT--TTTTA----------------TTTATATCCCATGAACTGACTTTG-----ATTATGC-TTTTCAATTTGCAGAACTGTTCGAAGTGGCGCCCCGCTCCGTGGCCATGTCGATGGGCAGTCTG
droBip1 scf7180000395838:171571-171905 - ATTCTTCTACCAGTTCGGGCTGGGCCCCATCCCCTACTTTATTGGAGCAGGTA--ATTGGA-------A------------GTCGCGTGACT--ATTATTTATACGCATTCTTTGGGCTCC-------------AGTGCTCGTGACTGGCCCAGCTGC-TCAAGTTTCGGCGAAGTGGGTCTGCAACT-----GGACCCGATATAGAATG-GGGTTCATTGGCAC-GC------------------------------------------------CGT-CTCCAGACAGACTGTCGT--ATTGCTGACGCAATATAATTGGACGATTGG--CTCTA----------------TTTATATCACACAAACTGACTTTG-----ATTATGC-TTTTCAATTTGCAGAACTTTTCGAAGTGGCCCCCCGCTCCGTGGCCATGTCGATGGGCAGTCTG
droKik1 scf7180000302471:599506-599809 + ATTCTTCTATCAATTCGGGCTGGGTCCCATTCCCTACTTCATTGGCTCAGGTA--ATTTGA-------GG-----------ATCCGGTAA---------TTATTGGCATTCC--------------------------------------CTAGCTGC-TCGAATTTCGAAGAACTGGGTCTGCAATT-----------GGAGTCTATTTAAAGTTCATTGGCTC-CC-CA-----------------------------CATCA-------GATACGT-TTCCAGACACAGCGTCGTGGATTGCTGACGCAATTTA-----------G---GTTTA----------------TTTTTAGCCACCAAACTGATTCAA-TTCGATTGTAT-TTTATAATTTGTAGAACTTTTCGAGGTGGCCCCCCGCTCCGTGGCCATGTCGATGGGCAGTCTG
droFic1 scf7180000453215:228874-229208 - ATTCTTTTACCAATTTGGACTGGGTCCCATTCCCTACTTCATCGGATCAGGTA--ATTT----------------------GTCGCGTGACTTCGTTGTTTACACGCTTTCGTACAACTTT-------------ATTATGCGCGACTGGGACAGCTGC-TCGTGCTTCGGAGAAGCGGGTTTGGTTTTGATTCGAAATTTGAATCGAAT--GGGTTCATTGGCAC-GCCACACATATATATGCTTATAGC----------CCATA-------G------------------------------------ACTCTATAATTGAATGGCTG---GGGTA----------------TTTTGGGACCATTAACTGATTCGA-----ATTGTGC-TCTTCAATTTGCAGAACTGTTCGAGGTGGCTCCCCGCTCCGTGGCCATGTCGATGGGCAGCCTG
droEle1 scf7180000491240:776485-776841 + CTTCTTTTTCCAATTTGGATTGGGTCCCATTCCCTACTTCATTGGCTCAGGTA--TTTA----------------------GTCGCGTGACTTTATTGTTTGTACGATTTCCTAAAGCTCC-------------AATAGTCGTGGCTGAGACAGCTGC-TCGTGTTTCGGAGAAATGGGTCTGCAATTGAGGCGGAATTGGAATCGAACG-AGGTTCATTGGCTC-TG----GACACATTTGTTTACGAC----------TTTTT-----TGAAGACCT-TCCCAGACACATCG---------------ACTTTATAATTGGATGACTGGTTGTTTA----------------TTTTTAGACCCCTAACTGATTTGA-----ATTGTGC-TCTCCAATTTGCAGAACTATTCGAGGTGGCTCCCCGCTCCGTGGCCATGTCGATGGGCAGCCTG
droRho1 scf7180000770177:63043-63395 + CTTCTTTTATCAATTTGGACTGGGTCCCATTCCCTACTTCATCGGCTCAGGTA--ATTT----------------------GTCGCGTGACTTTATTGTTTGTCTACATTCCCATAGCTCC-------------ATTAATCACGACTGAGACAGCTGC-GCGTGAATCCGAGAAATTGGTTTGCAATTGAGCCGGAATTGGAATCGAATG-GGGTTCATTGGCTT-AC----TATACATTTGTTTACGGC----------TTTTA-------AAGACCTTCATCAGACAAACCG---------------TCTGTATAATTGGATGACTG---GTTTA----------------TTTTTAGACCCATTACTAATTCGA-----ATTGTGC-TCTCCAATTTGCAGAATTATTTGAGGTGGCTCCGCGCTCAGTGGCCATGTCCATGGGCAGTCTT
droBia1 scf7180000302291:1830619-1830968 + ATTCTTCTACCAATTCGGACTGGGTCCCATTCCCTACTTCATTGGCTCAGGTA--ACTT----------------------GTCGCGTGACTCCATGGTTT-TGCGCATTCCAGTAGCTCC-------------GTTAATCGTGACGGGGACAGCTGCCTCATGTTTCGAAGAAGTGGCTTTGTCATTGAGGCGGAATCGGAATCGAATG-GGGTTCAACGCCTC-TC----AACACATTTGCTTACGGC----------CATCA-------GGGACGT-TCCCAGACGCACTG---------------GC--TATAATTGGATGGATG---AGTTA----------------TTTTTATACCGCTAACTGATTCGA-----TTTGTGC-TCTCCAATTTGCAGAACTGTTCGAGGTGGCTCCCCGCTCCGTGGCCATGTCAATGGGCAGTCTG
droTak1 scf7180000415088:133703-134042 - ATTCTTCTACCAATTCGGACTGGGTCCCATTCCCTACTTCATTGGCGCAGGTA--ATTT----------------------GTCGCGTGACTCCAATGTTTGTGTGCATTCCAATAGCTCC-------------ATTAATCGTGACTGGGACAGAAGCCTCGAGTTTC-------------AGCAATTGAGGCGGAATTGGAATCGAATT-GGGTTCAATGGCTC-TC----ACCACATTTGCTTACGTT----------CATCA-------GAGACGT-TCCCAGACACGCTG---------------ACTCTATAATTGAATGGATT---GTTTA----------------TTTTTGGACCTCTAACTGATTCGA-----TTTGTGC-TCTCCAATTTGCAGAACTGTTCGAGGTGGCTCCCCGCTCCGTGGCCATGTCGATGGGCAGCCTC
droEug1 scf7180000409474:2806320-2806671 + ATTCTTCTATCAATTTGGATTGGGTCCCATTCCCTACTTCATAGGCTCAGGTA--ATGT----------------------GTCGCGTGACTCCATTATTTATAAGCGTTTCAGTAGCTAT-------------TCTAATCGTGACTGGGACAGCTGC-TCGTGTTTCGAAGAAGTGATATAGCAATTGAGACGGAATTGGAATCGAATC-GGGTTCAATGGCTC-AG----CACACATTTGTTTACGGC----------TATCA-------GAAACGT-TCCCAGACACAGTG---------------ACTCTCTAATTGAATGGCTG---TTTTA----------------TTTTTAGACTTTAAACTAATTTGA-----TTTGTGT-TCTTTAATTTGCAGAACTTTTCGAGGTGGCTCCCCGCTCCGTAGCCATGTCGATGGGAAGTCTT
dm3 chr2R:3973540-3973881 + ATTCTTCTACCAATTCGGGCTGGGCCCCATTCCCTACTTTATTGGCGCAGGTA--AGTT----------------------GTCGCGTGACTCCATTGTTTTTGCGCATTCCAATAGCTCC-------------ATTAATCGTTACTGGGCCAGCTGC-TCGTGTTTCGAAGAAGTGATTCTGCAATTAAGGCGGAATTGGAATTGAATT-GGGTTCAATGGCT-GCC-CAGCACACATTTGATTACGGC----------CACTA-------GATATGT-TCCCAGACGCACTC---------------GC-------------GTCTC---GTTTA----------------TTTTAAGAGCTCTAACTGATTCGA-----TTTGTAC-TCTCCACTTTGCAGAACTGTTCGAGGTGGCTCCCCGCTCCGTGGCCATGTCGATGGGCAGCTTG
droSim2 2r:4796372-4796726 + dsi_21505 ATTCTTCTACCAATTCGGGCTGGGTCCCATTCCCTACTTTATTGGCGCAGGTA--AGTT----------------------GTTGCGTGACTCCATTGTGTGTGCGCCTTCCAATAGCTCC-------------ATTAATCGTTATTGGGCCAGCTGC-TCGTGCTTCGAAGAAGTGATTCTGCAATTAAGGCGGAATTGGAATCGAATT-GGGTTCAATGGCT-GCC-CAGCACACATTTGTTTACGAC----------CACTA-------GATACGT-TCCCAGACGCACTC---------------TCCATATAATTGAATGGCTG---ATTTA----------------TTTTTAGAGCTCTTACTGATTCGA-----TTTGTAC-TCTCCACTTTGCAGAACTGTTCGAGGTGGCTCCCCGCTCCGTGGCCATGTCGATGGGCAGCTTG
droSec2 scaffold_1:1617756-1618110 + ATTCTTCTACCAATTCGGGCTGGGTCCCATTCCCTACTTTATTGGCGCAGGTA--AGTT----------------------GTCGCGTGACTCCATTGTGTGTGCGCATTCCAATAGCTCC-------------ATTAATCGTTATTGGGCCAGCTGC-TCGTGTTTCGAAGAAGTGATTCTGCAATTAAGGCGGAATTGGAATCGAATT-GGGTTCAATGGCT-GCC-CAGCACACATTTGTTTACGAC----------CACTA-------GATACGT-TCCCAGAGGCACTC---------------TCCATATAATTGGATGGCTG---GTTTA----------------TTTTTAGAGCTCTTACTGATTCGA-----TTTGTAC-TCTCCACTTTGCAGAACTGTTCGAGGTGGCTCCCCGCTCCGTGGCCATGTCGATGGGCAGCTTG
droYak3 2L:16630707-16631061 + ATTCTTCTACCAATTCGGACTGGGTCCCATTCCTTACTTTATTGGCGCGGGTA--AGTT----------------------GTCGCGTGACTCCATTGCTTGTGCGCATTTCAAAAGCTCC-------------ATTAATCGTTACTGGGGCAGCTGT-TCGTGTTTCGAAGAAGTGATTCTGCAATTAAGGCGGAATCGGGATCGAATT-GGGTTCAATGGCT-GCC-CAGCACACATTTGCTTACGGC----------AACCA-------GATACGT-TCCCAGACACACTT---------------GCCATATAATTGGATGGCTT---GGTTA----------------TTTTTAGACCTATAACTGATTCGA-----TTTGTAC-TCTCCAATTTGCAGAACTGTTTGAGGTGGCTCCCCGCTCCGTGGCCATGTCGATGGGCAGTTTG
droEre2 scaffold_4929:18654053-18654414 - ATTCTTCTACCAATTCGGGCTGGGTCCGATTCCCTACTTTATTGGCGCAGGTA--AGTT----------------------GTCCCGTGACTCCATTGTTTGTGTGCATTCCAATATATCC-------------ATCAATCGTTACTGGGGCAGCTGC-TCGTGTTTCGAAGAACTGATTCTGCAATTAAGGGGGAATTGGAATCGAATT-GGGTTCAATGGCT-GCC-CAGCACACATTTGTTTACGGC----------CACAAGATACTAAATACGT-TCCCAGACACACTC---------------GCCATATAATTGAAAGCCTC---GGTTA----------------TTTTTAGACCTATAACTGATTCGA-----TTTGTAC-TCTTCAATTTGCAGAACTGTTTGAGGTGGCGCCCCGCTCCGTGGCCATGTCGATGGGCAGCTTG
dp5 3:7828580-7828939 - TTTCTTCTACCAGTTCGGCCTGGGCCCCATTCCGTACTTCATTGGATCAGGTA--ATTTGA-------GGCCGGGCCGCCAGTCGCGTGACAACGCCAGC--------TGCCACAAGCGTCGAAGTAAAAGTCGAGT-CTCGTGATGCCGCCAGTTGC-TCCAATTTCAAAGCATTCAGTCTATAATT------------GAATTGAACG-AGGTTCATTGGAC------------CAGTTGTTTATGAC----------AATAG----------GCAA-CTCCAGACACTCTG---------------TCGTTGTCGTTGATCGCC-G--------ATCGTCGCTGGCTCAATTACTGGACTGCTAACTGATACGA-----ATTATGCCTTTTCAATTCGCAGAACTGTTCGAGGTGGCCCCTCGCTCCGTGGCCATGTCGATGGGCAGCCTG
droPer2 scaffold_4:1739255-1739614 - TTTCTTCTACCAGTTCGGCCTGGGCCCCATTCCGTACTTCATTGGATCAGGTA--ATTTGA-------GGCCGGGCCGCCAGTCGCGTGACAACGCCAGC--------TGCCACAAGCGTCGAAGTAAAAGTCGAGT-CTCGTGATGCCGCCAGTTGC-TCCAATTTCAGAGCATTCAGTCTATAATT------------GAATTGAACG-AGGTTCATTGGAC------------CAGTTGTTTATGAC----------AATAG----------GCAA-CTCCAGACACTCTG---------------TCGTTGTCGTTGATCGCC-G--------ATCGTCGCTGGCTCAATTACTGGACTGCTAACTGATACGA-----ATTATGCCTTTTCAATTTGCAGAACTGTTCGAGGTGGCCCCTCGCTCCGTGGCCATGTCGATGGGCAGCCTG
droWil2 scf2_1100000004954:2300263-2300538 - dwi_3713 ATTCTTTTATCAATTTGGCCTGGGTCCGATTCCTTACTTTATTGGTGCAGGTA--ATTGAACAGACAAA------------ATCGCGA--CG---------------------------------------------------------------TTT-TTTAATTT------------TCTTTAATT------------GAGTAAGCTG-AAGCTTATTTATT------------TGTTTATTTATAGTAACGCAAGGTCGTCA-------AAGACAA-TATTGATGACAA-------------------------------TGTTTT---TCTTA----------------TTTTTCTCTAACCAACTTATTGGCATCAAAT--TAT-TTTTCAATTTGCAGAACTCTTTGAAGTGGCTCCCCGTCCTGTAGCAATGTCTATGGGAAGTCTG
droVir3 scaffold_12875:14870317-14870407 + ATTCTTCTATCAGTTCGGTCTCGGACCAATTCCTTATTTTATTGGCTCAGGTATAATTTGA-------A------------------------------------------------------------------------------------------------------GAAGCC--------------------------------G-CAGT------------------------------------------------------------ACTT-GCATACACGTATT----------------------------------------------------------------------------------------------------------------------------------------------------------------C
droMoj3 scaffold_6496:7023355-7023446 - ATATATATTCCATATTG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTAAACAATTGA----------------------------------------------------------------------TATATCTTTTAGAACTGTTTGAGGTCGCGCCACGCCCCGTCGCCATGTCCATGGGCAGTCTC
droGri2 scaffold_15245:11301022-11301134 - TATCGCCTTTCAGCTGGCCCTGGCTGCCATGCCCTCCTTTATAGGCACAGGTA--TTGT----------------------ATTGTAC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TA---AATTA----------------TTTTAATGTCTCTA-TTCAC---------AT--TGTCTTTG--CATTTCAGAGCTC---------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droAna3
TTTCTTCTACCAGTTCGGTCTGGGCCCCATCCCCTACTTTATTGGAGCAGGTA--ATTGAA-------A------------GTCGCGTGACT--ATTATTTATACGCATTCTTTGGACTCT-------------AGTGCTCGTGACTGGGCCAGCTGC-TCAAGTTTCGGCGAACTG-----------------GACCCGATATAGAATG-GGGTTCATTGGCAC-GC------------------------------------------------CGT-CTCCAGACAGACTGTCGT--ATTGCTGACGCAATATAATTGGACGATTGT--TTTTA----------------TTTATATCCCATGAACTGACTTTG-----ATTATGC-TTTTCAATTTGCAGAACTGTTCGAAGTGGCGCCCCGCTCCGTGGCCATGTCGATGGGCAGTCTGSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
...........................................................................................................................................................................................................TAGAATG-GGGTTCATTGGCAC-GC------------------------------------------------C.................................................................................................................................................................................2419.009081000
....................................................................................................TATACGCATTCTTTGGACTCT-------------AGTGC...........................................................................................................................................................................................................................................................................................................................2616.006330000
...............................................................................................................................................................TCAAGTTTCGGCGAACTG-----------------GACCCGA.............................................................................................................................................................................................................................................................2516.006060000
...............................................................................................................................................................TCAAGTTTCGGCGAACTG-----------------GACCC...............................................................................................................................................................................................................................................................2315.005230000
..............................................................................................................CTTTGGACTCT-------------AGTGCTCGTGACTG..................................................................................................................................................................................................................................................................................................................2514.004301000
...........................................................................................................................................................................................................TAGAATG-GGGTTCATTGGCAC-GC------------------------------------------------..................................................................................................................................................................................2313.003030000
.........................................................................................................................................................................................................TATAGAATG-GGGTTCATTGGCAC-GC------------------------------------------------..................................................................................................................................................................................2513.003120000
...............................................................................................................TTTGGACTCT-------------AGTGCTCGTGACTG..................................................................................................................................................................................................................................................................................................................2412.002200000
...........................................................................................................................................................................................................TAGAATG-GGGTTCATTGGCAC-G...................................................................................................................................................................................................................................2212.002110000
............................................................................................................TTCTTTGGACTCT-------------AGTGCTCGTGACTG..................................................................................................................................................................................................................................................................................................................2712.002200000
..............................................................................................................CTTTGGACTCT-------------AGTGCTCGTGACTGG.................................................................................................................................................................................................................................................................................................................2612.002200000
..........................................................................................................................................................................................................................................................................................................................................................................................................................TCGAAGTGGCGCCCCGCTCCGTGGCCA.................2712.002110000
...................................................................................................................GACTCT-------------AGTGCTCGTGACTGGGCC..............................................................................................................................................................................................................................................................................................................2412.002020000
TTTCTTCTACCAGTTCGGTCTGGGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................2512.002020000
.........................................................................................................................................................................................................................................................................................TCCAGACAGACTGTCGT--ATTGCTGACG................................................................................................................................................2712.002200000
............................................................................................................TTCTTTGGACTCT-------------AGTGCTCGTGACC...................................................................................................................................................................................................................................................................................................................2612.002020000
.TTCTTCTACCAGTTCGGTCTGGGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................2412.002200000
...............................................................................................................................................................................................................................................................................................................................................................................................................TGCAGAACTGTTCGAAGTGGCGCC...............................2412.002020000
..........................................................................................................................................................................................................ATAGAATG-GGGTTCATTGGCAC-GC------------------------------------------------CGT-..............................................................................................................................................................................2712.002000002
................................................................................................................................................................................................................................................................................................................................................................................................................................TGGCGCCCCGCTCCGTGGCCATGTCGA...........2712.002200000
.........................................................................................................................................................GCTGC-TCAAGTTTCGGCGAACTG-----------------GACC................................................................................................................................................................................................................................................................2712.002020000
...................................................................................................................GACTCT-------------AGTGCTCGTGACTGGGCCAGC...........................................................................................................................................................................................................................................................................................................2712.002200000
............................................................................................................TTCTTTGGACTCT-------------AGTGCTCGTGACTGG.................................................................................................................................................................................................................................................................................................................2811.001100000
...............................................................................................................................................................TCAAGTTTCGGCGAACTG-----------------GACCCG..............................................................................................................................................................................................................................................................2411.001010000
...................................................................................................................................................................GTTTCGGCGAACTG-----------------GACCCGA.............................................................................................................................................................................................................................................................2111.001010000
......................................................................................................................................................................................................................................................................................................................................................................................................TTTTCAATTTGCAGAACTGTTCGAAGTGG...................................2911.001100000
............................................................................................................TTCTTTGGACTCT-------------AGTGCTCGTGAC....................................................................................................................................................................................................................................................................................................................2511.001010000
.........................................................................................................................................................................................................................................................................................TCCAGACAGACTGTCGT--ATTGCTGACGC...............................................................................................................................................2811.001100000
......................................................................................................................................................................................................................................................................................................................................................................................................................................CCCGCTCCGTGGCCATGTCGATGGGCA.....2711.001100000
........................................................................................................................................................................................................................................................................................................................................................................................................................................CGCTCCGTGGCCATGTCGATGGGC......2411.001100000
TTTCTTCTACCAGTTCGGTCTG................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
........ACCAGTTCGGTCTGGGCCCCATCC......................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001100000
........................................................................................................................................TGCTCGTGACTGGGCCAGCTGC-TCAA...................................................................................................................................................................................................................................................................................................2611.001100000
...CTTCTACCAGTTCGGTCTGGGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
............................................................................................................................................................GC-TCAAGTTTCGGCGAACTG-----------------GACCC...............................................................................................................................................................................................................................................................2511.001010000
..............................................................................................................................................................................................................................................................................................................................................TTA----------------TTTATATCCCATGAACTGACTT...............................................................................2511.001100000
................................................................................................................TTGGACTCT-------------AGTGCTCGTGACTGG.................................................................................................................................................................................................................................................................................................................2411.001010000
.......TACCAGTTCGGTCTGGGCCCCATCC......................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001010000
...............................................................................................................................................................................................................................................................................................CAGACTGTCGT--ATTGCTGAC.................................................................................................................................................2011.001010000
......................................................................................................................................................................................................................................................................................................................................................................................................................................CCCGCTCCGTGGCCATGTCGATGGG.......2511.001100000
................................................................................................................TTGGACTCT-------------AGTGCTCGTGACTGGG................................................................................................................................................................................................................................................................................................................2511.001100000
.TTCTTCTACCAGTTCGGTCTGGGCCCC..........................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001100000
...............................................................................................................................................................TCAAGTTTCGGCGAACTG-----------------GACC................................................................................................................................................................................................................................................................2211.001010000
..........................................................................................................................................................................................................ATAGAATG-GGGTTCATTGGCAC-GC------------------------------------------------..................................................................................................................................................................................2411.001100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................CTCCGTGGCCATGTCGATGGG.......2111.001010000
..................................................................................................................................................................................................................................................................................................................................................................................................................................GCGCCCCGCTCCGTGGCCATGTCGA...........2511.001100000
.............................................................................................................................................................................................................................................................................................................................................................................................................TTTGCAGAACTGTTCGAAGTGGCGC................................2511.001010000
..............................................................................................................CTTTGGACTCT-------------AGTGCTCGTGACTGGT................................................................................................................................................................................................................................................................................................................2711.001100000
................................................................................................................TTGGACTCT-------------AGTGCTCGTGACTGGGC...............................................................................................................................................................................................................................................................................................................2611.001100000
.TTCTTCTACCAGTTCGGTCTGGGCCCCA.........................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001100000
...............................................................................................................................................................................................................................................................................................................................................................................................TTATGC-TTTTCAATTTGCAGAACTGT............................................2611.001100000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................TCCGTGGCCATGTCGATGGGCAG....2311.001010000
..................................................................................................................................................................................................................................................................................................................................................................................................TGC-TTTTCAATTTGCAGAACTGTTCGAA.......................................2811.001010000
...................................................................................................................GACTCT-------------AGTGCTCGTGACTGGGCCAG............................................................................................................................................................................................................................................................................................................2611.001100000
..............TCGGTCTGGGCCCCATCCCCTACC................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001010000
..................................................................................................................................................................................................................................................................................................................................................................................................TGC-TTTTCAATTTGCAGAACTGTTCGA........................................2711.001010000
.........................................................................................................................................................................................................................................................................................................................................................................................................................TTCGAAGTGGCGCCCCGCTCCGTGG....................2511.001100000
.TTCTTCTACCAGTTCGGTCTGGGCC............................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001010000
.........................................................................................................................................................GCTGC-TCAAGTTTCGGCGAACTG-----------------GA..................................................................................................................................................................................................................................................................2511.001100000
.................................................................................................................TGGACTCT-------------AGTGCTCGTGACTG..................................................................................................................................................................................................................................................................................................................2211.001100000
...........................................................................................................................................................................................................TAGAATG-GGGTTCATTGGCAC-GC------------------------------------------------CG................................................................................................................................................................................2511.001010000
.........................................................................................................................................................................................................................................................................................TCCAGACAGACTGTCGT--ATTGCTGAC.................................................................................................................................................2611.001010000
..........CAGTTCGGTCTGGGCCCCATCCCCTACTT...............................................................................................................................................................................................................................................................................................................................................................................................................................2911.001100000
...........................................................................................................................................................TGC-TCAAGTTTCGGCGAACTG-----------------GACCCGA.............................................................................................................................................................................................................................................................2811.001100000
...........................................................................................................................................................................................................TAGAATG-GGGTTCATTGGCAC-GC------------------------------------------------CGC-..............................................................................................................................................................................2611.001010000
..........................................................................................................................................................................................................................................................................................................................................................................................................................TCGAAGTGGCGCCCCGCTCCGTGGCCATG...............2911.001100000
................................................................................................................................................................................................................................................................................................................................................................................................................GCAGAACTGTTCGAAGTGGCGCCCCGC...........................2711.001100000
...........................................................................................................................................................................................................TAGAATG-GGGTTCATTGGCAC-GC------------------------------------------------CGT-T.............................................................................................................................................................................2711.001100000
...........................................................................................................................................................................................................TAGAATG-GGGTTCATTGGCAC-GC------------------------------------------------CGT-..............................................................................................................................................................................2611.001010000
...........AGTTCGGTCTGGGCCCCATCCCC....................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
.............................................................................................................................................................................................................................................................................................GACAGACTGTCGT--ATTGCTGACGCAA.............................................................................................................................................2611.001100000
..............................................................................................................................................................................................................................................................................................................................................TTA----------------TTTATATCCCATGAACTGACTTTG-----........................................................................2711.001100000
..................................................................................................................GGACTCT-------------AGTGCTCGTGACTGGGC...............................................................................................................................................................................................................................................................................................................2411.001010000
..................................................................................................................................................................................................................................................................................................ACTGTCGT--ATTGCTGACGCAATATA.........................................................................................................................................2511.001100000
...............................................................................................................................................................TCAAGTTTCGGCGAACTG-----------------GACCCGATA...........................................................................................................................................................................................................................................................2711.001100000
.................................................................................................................................................................AAGTTTCGGCGAACTG-----------------GACCCGATA...........................................................................................................................................................................................................................................................2511.001100000
...............................................................................................................................................................TCAAGTTTCGGCGAACTG-----------------G...................................................................................................................................................................................................................................................................1911.001100000
..............................................................................................................................................................................................................................................................................................................TGCTGACGCAATATAATTGGACGAT...............................................................................................................................2511.001100000
...........................................................................................................................................................TGC-TCAAGTTTCGGCGAACTG-----------------GACCCGAT............................................................................................................................................................................................................................................................2911.001010000
..........................................................................................................................................CTCGTGACTGGGCCAGCTGC-TT.....................................................................................................................................................................................................................................................................................................2211.001100000
..............................................................................................................................................................................................................................................................................................................................................TTA----------------TTTATATCCCATGAACTGACTTT..............................................................................2611.001100000
..TCTTCTACCAGTTCGGTCTGGGCCC...........................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001100000
........................................................................................................CGCATTCTTTGGACTCT-------------AGTGCTCGTG......................................................................................................................................................................................................................................................................................................................2711.001100000
.......................................................................................................................................................................................................................TCATTGGCAC-GC------------------------------------------------CGT-CTCCAGACAGA...................................................................................................................................................................2611.001010000
...................................................................................................................................................................................................................................................................................................................................................................TATATCCCATGAACTGACTTTG-----ATTA....................................................................2611.001100000
..............................................................................................................................................TGACTGGGCCAGCTGC-TCAAGTTTCGGC...........................................................................................................................................................................................................................................................................................2811.001100000
........................................................................................................................................................AGCTGC-TCAAGTTTCGGCGAACTG-----------------GACCC...............................................................................................................................................................................................................................................................2911.001100000
.........................................TTGGAGCAGGTA--ATTGAA-------A------------GTCGCGT..............................................................................................................................................................................................................................................................................................................................................................................2611.001010000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................TCCGTGGCCATGTCGATGGGCAGTC..2511.001010000
.................................................................................................................................................................................................................................................................................................................................................................................................................CAGAACTGTTCGAAGTGGCGCC...............................2211.001010000
.................................................................................................................................................................................................................................................................................................................................................................TTTATATCCCATGAACTGA..................................................................................1911.001100000
...............................................................................................................................................................................................................................................................................................................................................TA----------------TTTATATCCCATGAACTGACTTTG-----........................................................................2611.001100000
..............................................................................................................CTTTGGACTCT-------------AGTGCTCGTGACT...................................................................................................................................................................................................................................................................................................................2411.001010000
.....................................TTTATTGGAGCAGGTA--ATTGAA-------A------------GTC..................................................................................................................................................................................................................................................................................................................................................................................2611.001000001
.TTCTTCTACCAGTTCGGTCTGG...............................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
.........................................................................................................................................................................................................................................................................................TCCAGACAGACTGTCGT--ATTGCTG...................................................................................................................................................2411.001100000
...................................................................................................................GACTCT-------------AGTGCTCGTGACTGG.................................................................................................................................................................................................................................................................................................................2111.001100000
......................................................................................................................................................................................................................TTCATTGGCAC-GC------------------------------------------------CGT-CTCCAG........................................................................................................................................................................2211.001000010
...........................................................................................................................................................................................................................................................................................................................................................................ATGAACTGACTTTG-----ATTATGC-................................................................2111.001010000
.......................................................................................................................................................CAGCTGC-TCAAGTTTCGGCGAACTG-----------------GAC.................................................................................................................................................................................................................................................................2811.001100000
................................................................................................................................................................CAAGTTTCGGCGAACTG-----------------GACCCGA.............................................................................................................................................................................................................................................................2411.001010000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................TCCGTGGCCATGTCGATGGGCAGTCT.2611.001100000
.................................................................................................................TGGACTCT-------------AGTGCTCGTGACTGGGG...............................................................................................................................................................................................................................................................................................................2511.001010000
...........................................................................................................................................................TGC-TCAAGTTTCGGCGAACTG-----------------GACC................................................................................................................................................................................................................................................................2511.001010000
droBip1
ATTCTTCTACCAGTTCGGGCTGGGCCCCATCCCCTACTTTATTGGAGCAGGTA--ATTGGA-------A------------GTCGCGTGACT--ATTATTTATACGCATTCTTTGGGCTCC-------------AGTGCTCGTGACTGGCCCAGCTGC-TCAAGTTTCGGCGAAGTGGGTCTGCAACT-----GGACCCGATATAGAATG-GGGTTCATTGGCAC-GC------------------------------------------------CGT-CTCCAGACAGACTGTCGT--ATTGCTGACGCAATATAATTGGACGATTGG--CTCTA----------------TTTATATCACACAAACTGACTTTG-----ATTATGC-TTTTCAATTTGCAGAACTTTTCGAAGTGGCCCCCCGCTCCGTGGCCATGTCGATGGGCAGTCTGSizeHit CountTotal NormTotal
No Reads
droKik1
ATTCTTCTATCAATTCGGGCTGGGTCCCATTCCCTACTTCATTGGCTCAGGTA--ATTTGA-------GG-----------ATCCGGTAA---------TTATTGGCATTCC--------------------------------------CTAGCTGC-TCGAATTTCGAAGAACTGGGTCTGCAATT-----------GGAGTCTATTTAAAGTTCATTGGCTC-CC-CA-----------------------------CATCA-------GATACGT-TTCCAGACACAGCGTCGTGGATTGCTGACGCAATTTA-----------G---GTTTA----------------TTTTTAGCCACCAAACTGATTCAA-TTCGATTGTAT-TTTATAATTTGTAGAACTTTTCGAGGTGGCCCCCCGCTCCGTGGCCATGTCGATGGGCAGTCTGSizeHit CountTotal NormTotal
No Reads
droFic1
ATTCTTTTACCAATTTGGACTGGGTCCCATTCCCTACTTCATCGGATCAGGTA--ATTT----------------------GTCGCGTGACTTCGTTGTTTACACGCTTTCGTACAACTTT-------------ATTATGCGCGACTGGGACAGCTGC-TCGTGCTTCGGAGAAGCGGGTTTGGTTTTGATTCGAAATTTGAATCGAAT--GGGTTCATTGGCAC-GCCACACATATATATGCTTATAGC----------CCATA-------G------------------------------------ACTCTATAATTGAATGGCTG---GGGTA----------------TTTTGGGACCATTAACTGATTCGA-----ATTGTGC-TCTTCAATTTGCAGAACTGTTCGAGGTGGCTCCCCGCTCCGTGGCCATGTCGATGGGCAGCCTGSizeHit CountTotal NormTotal
No Reads
droEle1
CTTCTTTTTCCAATTTGGATTGGGTCCCATTCCCTACTTCATTGGCTCAGGTA--TTTA----------------------GTCGCGTGACTTTATTGTTTGTACGATTTCCTAAAGCTCC-------------AATAGTCGTGGCTGAGACAGCTGC-TCGTGTTTCGGAGAAATGGGTCTGCAATTGAGGCGGAATTGGAATCGAACG-AGGTTCATTGGCTC-TG----GACACATTTGTTTACGAC----------TTTTT-----TGAAGACCT-TCCCAGACACATCG---------------ACTTTATAATTGGATGACTGGTTGTTTA----------------TTTTTAGACCCCTAACTGATTTGA-----ATTGTGC-TCTCCAATTTGCAGAACTATTCGAGGTGGCTCCCCGCTCCGTGGCCATGTCGATGGGCAGCCTGSizeHit CountTotal NormTotal
No Reads
droRho1
CTTCTTTTATCAATTTGGACTGGGTCCCATTCCCTACTTCATCGGCTCAGGTA--ATTT----------------------GTCGCGTGACTTTATTGTTTGTCTACATTCCCATAGCTCC-------------ATTAATCACGACTGAGACAGCTGC-GCGTGAATCCGAGAAATTGGTTTGCAATTGAGCCGGAATTGGAATCGAATG-GGGTTCATTGGCTT-AC----TATACATTTGTTTACGGC----------TTTTA-------AAGACCTTCATCAGACAAACCG---------------TCTGTATAATTGGATGACTG---GTTTA----------------TTTTTAGACCCATTACTAATTCGA-----ATTGTGC-TCTCCAATTTGCAGAATTATTTGAGGTGGCTCCGCGCTCAGTGGCCATGTCCATGGGCAGTCTTSizeHit CountTotal NormTotal
No Reads
droBia1
ATTCTTCTACCAATTCGGACTGGGTCCCATTCCCTACTTCATTGGCTCAGGTA--ACTT----------------------GTCGCGTGACTCCATGGTTT-TGCGCATTCCAGTAGCTCC-------------GTTAATCGTGACGGGGACAGCTGCCTCATGTTTCGAAGAAGTGGCTTTGTCATTGAGGCGGAATCGGAATCGAATG-GGGTTCAACGCCTC-TC----AACACATTTGCTTACGGC----------CATCA-------GGGACGT-TCCCAGACGCACTG---------------GC--TATAATTGGATGGATG---AGTTA----------------TTTTTATACCGCTAACTGATTCGA-----TTTGTGC-TCTCCAATTTGCAGAACTGTTCGAGGTGGCTCCCCGCTCCGTGGCCATGTCAATGGGCAGTCTGSizeHit CountTotal NormTotal
No Reads
droTak1
ATTCTTCTACCAATTCGGACTGGGTCCCATTCCCTACTTCATTGGCGCAGGTA--ATTT----------------------GTCGCGTGACTCCAATGTTTGTGTGCATTCCAATAGCTCC-------------ATTAATCGTGACTGGGACAGAAGCCTCGAGTTTC-------------AGCAATTGAGGCGGAATTGGAATCGAATT-GGGTTCAATGGCTC-TC----ACCACATTTGCTTACGTT----------CATCA-------GAGACGT-TCCCAGACACGCTG---------------ACTCTATAATTGAATGGATT---GTTTA----------------TTTTTGGACCTCTAACTGATTCGA-----TTTGTGC-TCTCCAATTTGCAGAACTGTTCGAGGTGGCTCCCCGCTCCGTGGCCATGTCGATGGGCAGCCTCSizeHit CountTotal NormTotal
No Reads
droEug1
ATTCTTCTATCAATTTGGATTGGGTCCCATTCCCTACTTCATAGGCTCAGGTA--ATGT----------------------GTCGCGTGACTCCATTATTTATAAGCGTTTCAGTAGCTAT-------------TCTAATCGTGACTGGGACAGCTGC-TCGTGTTTCGAAGAAGTGATATAGCAATTGAGACGGAATTGGAATCGAATC-GGGTTCAATGGCTC-AG----CACACATTTGTTTACGGC----------TATCA-------GAAACGT-TCCCAGACACAGTG---------------ACTCTCTAATTGAATGGCTG---TTTTA----------------TTTTTAGACTTTAAACTAATTTGA-----TTTGTGT-TCTTTAATTTGCAGAACTTTTCGAGGTGGCTCCCCGCTCCGTAGCCATGTCGATGGGAAGTCTTSizeHit CountTotal NormTotal
No Reads
dm3
ATTCTTCTACCAATTCGGGCTGGGCCCCATTCCCTACTTTATTGGCGCAGGTA--AGTT----------------------GTCGCGTGACTCCATTGTTTTTGCGCATTCCAATAGCTCC-------------ATTAATCGTTACTGGGCCAGCTGC-TCGTGTTTCGAAGAAGTGATTCTGCAATTAAGGCGGAATTGGAATTGAATT-GGGTTCAATGGCT-GCC-CAGCACACATTTGATTACGGC----------CACTA-------GATATGT-TCCCAGACGCACTC---------------GC-------------GTCTC---GTTTA----------------TTTTAAGAGCTCTAACTGATTCGA-----TTTGTAC-TCTCCACTTTGCAGAACTGTTCGAGGTGGCTCCCCGCTCCGTGGCCATGTCGATGGGCAGCTTGSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
..................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCCCCGCTCCGTGGCCATGT..............2216.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006
.TTCTTCTACCAATTCGGGCTGG...............................................................................................................................................................................................................................................................................................................................................................................................................................................2214.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......TACCAATTCGGGCTGGGCCCCATT.......................................................................................................................................................................................................................................................................................................................................................................................................................................2413.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
.................................................................................................................................................................................................................................................................................................................................................................................................................CAGAACTGTTCGAGGTGGCTCC...............................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................A-----TTTGTAC-TCTCCACTTTGCAG..................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................TCCGTGGCCATGTCGATGGGCAGCTT.2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
............................ATTCCCTACTTTATTGGCGCAGAAC--...............................................................................................................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................TTCGA-----TTTGTAC-TCTCCACTTTGCAGA.................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCCATGTCGATGGGCAGCT..2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................TCCGTGGCCATGTCGATGGGC......2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101000000000000000000000000
.................................................................................................................................................................GTGTTTCGAAGAAGTGATT..................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................GTA--AGTT----------------------GTCGCGTGACTCCATTGT...................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................CCGCTCCGTGGCCATGTCGATGGGC......2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................TATTGGCGCAGGTA--AGTT----------------------GTC..................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................TGTTCGAGGTGGCTCCCCGCTCCGT......................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000
...........................CATTCCCTACTTTATTGGCGCAGAA..................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................TCCGTGGCCATGTCGATGGGCAGT...2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................CAGCTGC-TCGTGTTTCGAA...........................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
................................................................................................................................................................................................CGGAATTGGAATTGAATT-GGGT...............................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
...........................................................................................................................................................................................TAAGGCGGAATTGGAATTGAATT-G..................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.TTCTTCTACCAATTCGGGCTGGGCCCCA.........................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................ATTCGA-----TTTGTAC-TCTCCACTT.......................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................TTTGTAC-TCTCCACTTTGCAG..................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....TTCTACCAATTCGGGCTGGGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
ATTCTTCTACCAATTCGGGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...........................................................................................................................................................TGC-TCGTGTTTCGAAGAAGTGATTCT................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................CTCCGTGGCCATGTCGATGGG.......2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................CTCCGTGGCCATGTCGATG.........1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................ACTTTGCAGAACTGTTCGAGG......................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................TAC-TCTCCACTTTGCAGAACTGTTCGA........................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................GCTGGGCCCCATTCCCTACTTTATTGG.........................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
ATTCTTCTACCAATTCGGGCTGGGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................GAACTGTTCGAGGTGGCTCCCC.............................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................TCTAACTGATTCGA-----TTTGTAC-TCTCCACT........................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................TAACTGATTCGA-----TTTGTAC-TC..............................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................TAAGGCGGAATTGGAATTGAATT-GGG................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................CCGTGGCCATGTCGATGGGCA.....2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................CCACTTTGCAGAACTGTTCGAGGT.....................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................CTCCGTGGCCATGTCGATGGGC......2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................GCAGAACTGTTCGAGGTGG...................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................AGCACACATTTGATTACGGC----------CACTA-------GA....................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....TTCTACCAATTCGGGCTGGGCCCCA.........................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTCGATGGGCAGCTTG1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................TCGAGGTGGCTCCCCGCTC.........................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................TTCGAGGTGGCTCCCCGCTCCGTGGCCA.................2811.0010000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................GA-----TTTGTAC-TCTCCACTTTGCAG..................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................C---------------GC-------------GTCTC---GTTTA----------------TTTTAAGAGCTC.........................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....TCTACCAATTCGGGCTGGGCCCCATTCCC....................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......CTACCAATTCGGGCTGGGCC............................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................TCCGTGGCCATGTCGATGGGG......2111.0010000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................TTTGTAC-TCTCCACTTTGCAGAACTGT............................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.TTCTTCTACCAATTCGGGCTGGGCCC...........................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCCCCGCTCCGTGGCCATGTC.............2311.0010000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................GGGCTGGGCCCCATTCCCTACTTTATT...........................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............CGGGCTGGGCCCCATTCCCTAC.................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................AGGCGGAATTGGAATTGAATT-GGG................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
...........AATTCGGGCTGGGCCCCATTC......................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000
.TTCTTCTACCAATTCGGGCTGGGCCCCAT........................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................CCTACTTTATTGGCGCAG....................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................AATTAAGGCGGAATTGGA............................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....TCTACCAATTCGGGCTGGGCCCCAT........................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................GGTGGCTCCCCGCTCCGT......................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................TCGAGGTGGCTCCCCGCT..........................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
ATTCTTCTACCAATTCGGGCTGGGCC............................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................AACTGTTCGAGGTGGCTCCCCG............................2211.0010000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...CTTCTACCAATTCGGGCTGGG..............................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................CCGTGGCCATGTCGATGGGC......2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......TACCAATTCGGGCTGGGCCCCATTCCC....................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........AATTCGGGCTGGGCCCCATTCCCT...................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................TTTTTGCGCATTCCA.....................................................................................................................................................................................................................................................................................................................................................1520.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
ATTCTTCTACCAATTCGGGCTGGGTCCCATTCCCTACTTTATTGGCGCAGGTA--AGTT----------------------GTTGCGTGACTCCATTGTGTGTGCGCCTTCCAATAGCTCC-------------ATTAATCGTTATTGGGCCAGCTGC-TCGTGCTTCGAAGAAGTGATTCTGCAATTAAGGCGGAATTGGAATCGAATT-GGGTTCAATGGCT-GCC-CAGCACACATTTGTTTACGAC----------CACTA-------GATACGT-TCCCAGACGCACTC---------------TCCATATAATTGAATGGCTG---ATTTA----------------TTTTTAGAGCTCTTACTGATTCGA-----TTTGTAC-TCTCCACTTTGCAGAACTGTTCGAGGTGGCTCCCCGCTCCGTGGCCATGTCGATGGGCAGCTTGSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
..............................................................................................................................................................................................................................................................................................................................................................................................................TTGCAGAACTGTTCGAGG......................................1814.00400004000000000000
......CTACCAATTCGGGCTGGGTCCC..........................................................................................................................................................................................................................................................................................................................................................................................................................................2212.00202000000000000000
...................................................................................................................................................................................TCTGCAATTAAGGCGGAA.................................................................................................................................................................................................................................................................1812.00200002000000000000
...CTTCTACCAATTCGGGCTGGGTCCC..........................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100100000000000000
..TCTTCTACCAATTCGGGCTGG...............................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000000100000000
............ATTCGGGCTGGGTCCCATTCCCTA..................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100100000000000000
............ATTCGGGCTGGGTCCCATTCCCT...................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00101000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................CTGTTCGAGGTGGCTCCCC.............................1911.00100010000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................CAGAACTGTTCGAGGTGGCTCCCC.............................2411.00100100000000000000
...................................................................................................................................................................................................................GGGTTCAATGGCT-GGA-.................................................................................................................................................................................................................................16200.05100000000100000000
droSec2
ATTCTTCTACCAATTCGGGCTGGGTCCCATTCCCTACTTTATTGGCGCAGGTA--AGTT----------------------GTCGCGTGACTCCATTGTGTGTGCGCATTCCAATAGCTCC-------------ATTAATCGTTATTGGGCCAGCTGC-TCGTGTTTCGAAGAAGTGATTCTGCAATTAAGGCGGAATTGGAATCGAATT-GGGTTCAATGGCT-GCC-CAGCACACATTTGTTTACGAC----------CACTA-------GATACGT-TCCCAGAGGCACTC---------------TCCATATAATTGGATGGCTG---GTTTA----------------TTTTTAGAGCTCTTACTGATTCGA-----TTTGTAC-TCTCCACTTTGCAGAACTGTTCGAGGTGGCTCCCCGCTCCGTGGCCATGTCGATGGGCAGCTTGSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.........................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCCGTGGCCATGTCGATGGG.......2211.0010100
droYak3
ATTCTTCTACCAATTCGGACTGGGTCCCATTCCTTACTTTATTGGCGCGGGTA--AGTT----------------------GTCGCGTGACTCCATTGCTTGTGCGCATTTCAAAAGCTCC-------------ATTAATCGTTACTGGGGCAGCTGT-TCGTGTTTCGAAGAAGTGATTCTGCAATTAAGGCGGAATCGGGATCGAATT-GGGTTCAATGGCT-GCC-CAGCACACATTTGCTTACGGC----------AACCA-------GATACGT-TCCCAGACACACTT---------------GCCATATAATTGGATGGCTT---GGTTA----------------TTTTTAGACCTATAACTGATTCGA-----TTTGTAC-TCTCCAATTTGCAGAACTGTTTGAGGTGGCTCCCCGCTCCGTGGCCATGTCGATGGGCAGTTTGSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
................................................................................................................................................................................................................................................................................................................................................................................................................................TGGCTCCCCGCTCCGTGGCCATGTCGA...........27120.0020010000000019
.........................................................................................................................................................................................................................................................................................................................................................................................................................TTTGAGGTGGCTCCCCGCTCCGTGGCCA.................2813.00300000000003
...........................................................................................................................................................................................................................................................................................................................................................................................................................TGAGGTGGCTCCCCGCTCCGTGGCCA.................2613.00303000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................TCCGTGGCCATGTCGATGGGCAGT...2411.00101000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................TGTTTGAGGTGGCTCCCCGCTCC........................2311.00101000000000
........................TCCCATTCCTTACTTTATTGGCGCG.....................................................................................................................................................................................................................................................................................................................................................................................................................2511.00101000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................TCCCCGCTCCGTGGCCATGTCGATGGG.......2711.00100000000001
.TTCTTCTACCAATTCGGACTGGGTCCCA.........................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00101000000000
..TCTTCTACCAATTCGGACTG................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100010000000
.TTCTTCTACCAATTCGGACTGGG..............................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00101000000000
..............TCGGACTGGGTCCCATTCCTTACTT...............................................................................................................................................................................................................................................................................................................................................................................................................................2511.00101000000000
..TCTTCTACCAATTCGGACTGGGTCCCA.........................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00101000000000
.........................CCCATTCCTTACTTTATTGGCGCGGA...................................................................................................................................................................................................................................................................................................................................................................................................................2611.00101000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................TTGAGGTGGCTCCCCGCTCCGTG.....................2311.00101000000000
.......TACCAATTCGGACTGGGTCCCATTCCT....................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00101000000000
........................TCCCATTCCTTACTTTATTGGCGCGG....................................................................................................................................................................................................................................................................................................................................................................................................................2611.00101000000000
..........................CCATTCCTTACTTTATTGGCGCG.....................................................................................................................................................................................................................................................................................................................................................................................................................2311.00101000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................TGAGGTGGCTCCCCGCTCCGTGGCC..................2511.00101000000000
....................TGGGTCCCATTCCTTACTTTATTGGCG.......................................................................................................................................................................................................................................................................................................................................................................................................................2711.00101000000000
.....TCTACCAATTCGGACTGGGTCCCAT........................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00101000000000
.......TACCAATTCGGACTGGGTCCCATTCC.....................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00101000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................AACTGTTTGAGGTGGCTCCCCGCTCCGT......................2811.00101000000000
droEre2
ATTCTTCTACCAATTCGGGCTGGGTCCGATTCCCTACTTTATTGGCGCAGGTA--AGTT----------------------GTCCCGTGACTCCATTGTTTGTGTGCATTCCAATATATCC-------------ATCAATCGTTACTGGGGCAGCTGC-TCGTGTTTCGAAGAACTGATTCTGCAATTAAGGGGGAATTGGAATCGAATT-GGGTTCAATGGCT-GCC-CAGCACACATTTGTTTACGGC----------CACAAGATACTAAATACGT-TCCCAGACACACTC---------------GCCATATAATTGAAAGCCTC---GGTTA----------------TTTTTAGACCTATAACTGATTCGA-----TTTGTAC-TCTTCAATTTGCAGAACTGTTTGAGGTGGCGCCCCGCTCCGTGGCCATGTCGATGGGCAGCTTGSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.TTCTTCTACCAATTCGGGCTGG...............................................................................................................................................................................................................................................................................................................................................................................................................................................22112.001200000012
...........................................................................................................................................................................................................................................................................................................................................................................................................................TGAGGTGGCGCCCCGCTCCGTGG....................2311.0011000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCCGTGGCCATGTCGATGGGC......2311.0010000010
........................TCCGATTCCCTACTTTATTGGCGCAGA...................................................................................................................................................................................................................................................................................................................................................................................................................2711.0011000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................TCCGTGGCCATGTCGATGGG.......2011.0011000000
dp5
TTTCTTCTACCAGTTCGGCCTGGGCCCCATTCCGTACTTCATTGGATCAGGTA--ATTTGA-------GGCCGGGCCGCCAGTCGCGTGACAACGCCAGC--------TGCCACAAGCGTCGAAGTAAAAGTCGAGT-CTCGTGATGCCGCCAGTTGC-TCCAATTTCAAAGCATTCAGTCTATAATT------------GAATTGAACG-AGGTTCATTGGAC------------CAGTTGTTTATGAC----------AATAG----------GCAA-CTCCAGACACTCTG---------------TCGTTGTCGTTGATCGCC-G--------ATCGTCGCTGGCTCAATTACTGGACTGCTAACTGATACGA-----ATTATGCCTTTTCAATTCGCAGAACTGTTCGAGGTGGCCCCTCGCTCCGTGGCCATGTCGATGGGCAGCCTGSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
..................................................................................................................................................................................................................................................................................................................................................................TACTGGACTGCTAACTGATACGA-----AT......................................................................2513.0030000000030
...........................................................................................................................................................................................................TTGAACG-AGGTTCATTGGAC------------C.........................................................................................................................................................................................................................2111.0010100000000
...........AGTTCGGCCTGGGCCCCATTCCGTA..................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000100000
.................................................................................................................................................................................................................................................................................................................................................................................................................CAGAACTGTTCGAGGTGGCCCCTCGCTC.........................2811.0011000000000
droPer2
TTTCTTCTACCAGTTCGGCCTGGGCCCCATTCCGTACTTCATTGGATCAGGTA--ATTTGA-------GGCCGGGCCGCCAGTCGCGTGACAACGCCAGC--------TGCCACAAGCGTCGAAGTAAAAGTCGAGT-CTCGTGATGCCGCCAGTTGC-TCCAATTTCAGAGCATTCAGTCTATAATT------------GAATTGAACG-AGGTTCATTGGAC------------CAGTTGTTTATGAC----------AATAG----------GCAA-CTCCAGACACTCTG---------------TCGTTGTCGTTGATCGCC-G--------ATCGTCGCTGGCTCAATTACTGGACTGCTAACTGATACGA-----ATTATGCCTTTTCAATTTGCAGAACTGTTCGAGGTGGCCCCTCGCTCCGTGGCCATGTCGATGGGCAGCCTGSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
...CTTCTACCAGTTCGGCCTG................................................................................................................................................................................................................................................................................................................................................................................................................................................1913.003300000
...CTTCTACCAGTTCGGCCT.................................................................................................................................................................................................................................................................................................................................................................................................................................................1813.003300000
........................................................................................................................................................................................................................................................................................................................................................................................................................................CGCTCCGTGGCCATGTCGATGGG.......2311.001001000
...CTTCTACCAGTTCGGCCG.................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001100000
.....................................................................................................................................................................................................................................................................................................................................................................................................................ACTGTTCGAGGTGGCCCCT..............................1911.001001000
...CTTCTACCAGTTCGGCCC.................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001100000
.....................................................................................................................................................................................................................................................................................................................................................................TGGACTGCTAACTGATAATG-----........................................................................2090.111000010
droWil2
ATTCTTTTATCAATTTGGCCTGGGTCCGATTCCTTACTTTATTGGTGCAGGTA--ATTGAACAGACAAA------------ATCGCGA--CG---------------------------------------------------------------TTT-TTTAATTT------------TCTTTAATT------------GAGTAAGCTG-AAGCTTATTTATT------------TGTTTATTTATAGTAACGCAAGGTCGTCA-------AAGACAA-TATTGATGACAA-------------------------------TGTTTT---TCTTA----------------TTTTTCTCTAACCAACTTATTGGCATCAAAT--TAT-TTTTCAATTTGCAGAACTCTTTGAAGTGGCTCCCCGTCCTGTAGCAATGTCTATGGGAAGTCTGSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.......TATCAATTTGGCCTGGGTCCGAT........................................................................................................................................................................................................................................................................................................................................................................................................................................2312.00202000
..TCTTTTATCAATTTGGCCTGGGTCCGAT........................................................................................................................................................................................................................................................................................................................................................................................................................................2812.00202000
.TTCTTTTATCAATTTGGCCTGGGTCCGAT........................................................................................................................................................................................................................................................................................................................................................................................................................................2911.00101000
.......TATCAATTTGGCCTGGGTCCGATTCCT....................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00101000
................................................................................................................................................................................................................................................................................................................................................................................................................................TGGCTCCCCGTCCTGTAGCAATGTC.............2511.00110000
...................................................................................................................................................................................................................................................................................................................................TGTTTT---TCTTA----------------TTTTTCTCTAACCAACT....................................................................................2811.00101000
...............................................................GACAAA------------ATCGCGA--CG---------------------------------------------------------------TTT-TT.....................................................................................................................................................................................................................................................................................................2011.00100100
...CTTTTATCAATTTGGCCTGGGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100010
...............................................................................................................................................................................................................................................................................................................................................................................................................................GTGGCTCCCCGTCCTGTAGCAATGTCTAT..........2911.00101000
..............................TCCTTACTTTATTGGTGCAGG...................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000
........................TCCGATTCCTTACTTTATTGGTGCAGAAC--...............................................................................................................................................................................................................................................................................................................................................................................................................2911.00101000
.....TTTATCAATTTGGCCTGGGTC............................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100010
........................................................................................................................................................................................AATT------------GAGTAAGCTG-AAGCT..............................................................................................................................................................................................................................................1911.00100010
....................................................................................................................................................................................................................................................................................................................................................................................................................................TCCCCGTCCTGTAGCAATGTCTAT..........2411.00101000
droVir3
ATTCTTCTATCAGTTCGGTCTCGGACCAATTCCTTATTTTATTGGCTCAGGTATAATTTGA-------A------------------------------------------------------------------------------------------------------GAAGCC--------------------------------G-CAGT------------------------------------------------------------ACTT-GCATACACGTATT----------------------------------------------------------------------------------------------------------------------------------------------------------------CSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
..............TCGGTCTCGGACCAATTCCTTAT.................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000000000000000000000000000000000000000000000000001
...CTTCTATCAGTTCGGTCTCGGACCAATTC......................................................................................................................................................................................................................................................................................................................................................................................................................................2911.001000000000000000000000010000000000000000000000000000000000000000
............................ATTCCTTATTTTATTGGCTCAGA...................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000010000000000000000000000000000000000000000000000000
....TTCTATCAGTTCGGTCTCGGACCAAT........................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000000000000000000000000010000000000000000000000000000000000000
.....TCTATCAGTTCGGTCTCG...............................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000000000000000000000000000000000100000000000000000000000000000
droMoj3
ATATATATTCCATATTG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTAAACAATTGA----------------------------------------------------------------------TATATCTTTTAGAACTGTTTGAGGTCGCGCCACGCCCCGTCGCCATGTCCATGGGCAGTCTCSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
........................................................................................................................................................................................................................................................................................................................................................................................................................................CGCCCCGTCGCCATGTCCAT..........2011.001100000
droGri2
TATCGCCTTTCAGCTGGCCCTGGCTGCCATGCCCTCCTTTATAGGCACAGGTA--TTGT----------------------ATTGTAC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TA---AATTA----------------TTTTAATGTCTCTA-TTCAC---------AT--TGTCTTTG--CATTTCAGAGCTC---------------------------------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/18/2015 at 03:33 AM