ID:

dan_2039

 Coordinate:

scaffold_13266:16052354-16052504 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-4.8 -4.1 -4.0

Flybase annnotation

CDS [Dana\GF13637-cds]; exon [dana_GLEANR_13645:2]; intron [Dana\GF13637-in]

No Repeatable elements found

mature
  1. scaffold_9989:256-276 +
  2. scaffold_12613:28694-28714 +
  3. scaffold_12902:69333-69353 +
  4. scaffold_12916:13721841-13721861 +
  5. scaffold_12928:501471-501491 +
  6. scaffold_12935:41734-41754 +
  7. scaffold_12947:1272549-1272569 +
  8. scaffold_12984:433146-433166 +
  9. scaffold_13060:49238-49258 +
  10. scaffold_13079:128292-128312 +
  11. scaffold_13137:690034-690054 +
  12. scaffold_13248:1465577-1465597 +
  13. scaffold_13266:14699794-14699814 +
  14. dan_2039  scaffold_13266:16052417-16052437 +
  15. scaffold_13280:1416172-1416192 +
  16. scaffold_13337:16142095-16142115 +
  17. scaffold_13340:14431451-14431471 +
  18. scaffold_13417:2679896-2679916 +
  19. scaffold_13417:4959939-4959959 +
  20. scaffold_13417:5487073-5487093 +
  21. scaffold_8290:2947-2967 +
  22. scaffold_13034:471643-471663 +
  23. scaffold_13034:831185-831205 +
  24. scaffold_13045:1214139-1214159 +
  25. scaffold_13071:6232-6252 +
  26. scaffold_13230:632103-632123 +
  27. scaffold_13266:19333781-19333801 +
  28. scaffold_13339:3503230-3503250 +
  29. scaffold_13339:3531064-3531084 +
  30. scaffold_13499:335094-335114 +
  31. scaffold_13767:805275-805295 +
  32. scaffold_13770:161649-161669 +
  33. scaffold_12943:79944-79964 +
  34. scaffold_12948:392859-392879 +
  35. scaffold_12984:750235-750255 +
  36. scaffold_13034:382736-382756 +
  37. scaffold_13034:1500497-1500517 +
  38. scaffold_13034:1928025-1928045 +
  39. scaffold_13045:968003-968023 +
  40. scaffold_13082:2450088-2450108 +
  41. scaffold_13137:1017779-1017799 +
  42. scaffold_13230:981573-981593 +
  43. scaffold_13230:2237215-2237235 +
  44. scaffold_13230:2581387-2581407 +
  45. scaffold_13248:2526551-2526571 +
  46. scaffold_13260:1745529-1745549 +
  47. scaffold_13260:1792566-1792586 +
  48. scaffold_13266:4169064-4169084 +
  49. scaffold_13266:19762040-19762060 +
  50. scaffold_13272:465042-465062 +
  51. scaffold_13339:3020773-3020793 +
  52. scaffold_13461:435-455 +
star
  1. scaffold_9989:231-251 +
  2. scaffold_12613:28669-28689 +
  3. scaffold_12902:69308-69328 +
  4. scaffold_12903:128301-128321 +
  5. scaffold_12916:13721816-13721836 +
  6. scaffold_12928:501446-501466 +
  7. scaffold_12935:41709-41729 +
  8. scaffold_12947:1272524-1272544 +
  9. scaffold_12984:433121-433141 +
  10. scaffold_13060:49213-49233 +
  11. scaffold_13111:423367-423387 +
  12. scaffold_13230:1958477-1958497 +
  13. scaffold_13266:14699769-14699789 +
  14. dan_2039  scaffold_13266:16052392-16052412 +
  15. scaffold_13280:1416147-1416167 +
  16. scaffold_13337:23275676-23275696 +
  17. scaffold_13417:2679871-2679891 +
  18. scaffold_13417:4947961-4947981 +
  19. scaffold_13417:4959914-4959934 +
  20. scaffold_13417:5487048-5487068 +
  21. scaffold_631:341-361 -
  22. scaffold_665:1056-1076 -
  23. scaffold_9084:8226-8246 -
  24. scaffold_10513:102546-102566 -
  25. scaffold_12935:42852-42872 -
  26. scaffold_12947:74528-74548 -
  27. scaffold_12947:363480-363500 -
  28. scaffold_13034:1501609-1501629 -
  29. scaffold_13034:2042542-2042562 -
  30. scaffold_13082:2107865-2107885 -
  31. scaffold_13111:356410-356430 -
  32. scaffold_13111:426947-426967 -
  33. scaffold_13228:668391-668411 -
  34. scaffold_13250:875638-875658 -
  35. scaffold_13258:279386-279406 -
  36. scaffold_13339:556927-556947 -
  37. scaffold_13339:2466325-2466345 -
  38. scaffold_13417:2681025-2681045 -
  39. scaffold_13461:3076-3096 -
  40. scaffold_13499:336217-336237 -
  41. scaffold_12905:482907-482927 +
  42. scaffold_12943:79919-79939 +
  43. scaffold_12948:392834-392854 +
  44. scaffold_12984:750210-750230 +
  45. scaffold_13034:382711-382731 +
  46. scaffold_13034:1500472-1500492 +
  47. scaffold_13034:1928000-1928020 +
  48. scaffold_13082:2100410-2100430 +
  49. scaffold_13082:2450063-2450083 +
  50. scaffold_13137:1017754-1017774 +
  51. scaffold_13258:699376-699396 +
  52. scaffold_13266:4169039-4169059 +
  53. scaffold_13266:19762015-19762035 +
  54. scaffold_13272:465017-465037 +
  55. scaffold_13339:544256-544276 +
  56. scaffold_13339:3020748-3020768 +
  57. scaffold_13417:3724108-3724128 +
  58. scaffold_13461:410-430 +
  59. scaffold_13767:108314-108334 +
  60. scaffold_13767:122361-122381 +
  61. scaffold_12276:44631-44651 -
  62. scaffold_12586:549263-549283 -
  63. scaffold_12903:133097-133117 -
  64. scaffold_12911:2308562-2308582 -
  65. scaffold_12916:13722882-13722902 -
  66. scaffold_12948:393897-393917 -
  67. scaffold_13017:116503-116523 -
  68. scaffold_13030:13183-13203 -
  69. scaffold_13082:2467034-2467054 -
  70. scaffold_13230:27756-27776 -
  71. scaffold_13230:2582512-2582532 -
  72. scaffold_13230:2595048-2595068 -
  73. scaffold_13248:2527669-2527689 -
  74. scaffold_13250:2542595-2542615 -
  75. scaffold_13337:16143207-16143227 -
  76. scaffold_13339:836296-836316 -
  77. scaffold_13339:3471828-3471848 -
  78. scaffold_13417:4960826-4960846 -
  79. scaffold_13767:610088-610108 -
  80. scaffold_13767:988132-988152 -
  81. scaffold_13035:10160-10180 +
  82. scaffold_13082:1114844-1114864 +

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
GCTACATGAATTATCAAGGCTGTCGGCGTAAATTCGATGTAAACGCCTTCGTAATACCACTAACCATACAACATATAGACTTCTCATTTCATACAACGAAAATGGACGCAAAAATTTCTTGCGACAGGCCCCCGGAGGCCCCAGAGAGAATCTTACTCTCATTCTTACGCTCATTTTTACGCTCATAATCTCATTTAACTTTTTTGGTTGTTCAGTCGCAGAGAGGCGCATCATCAAGAAGGTTCTTCTGC
****************************************************************************************..............((..(((((.......))))).))........********************************************************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total M044
female body
 V106
head
 V105
male body		 M058
embryo
 V055
head
 V039
embryo
...............................................................................................................................................................................................................TTGTTCAGTCGCAGAGAGG......................... 19 0 20 12.60 252 0 69 183 0 0 0
.................................................................................................................ATTTCTTGCGACAGGCCCCCG..................................................................................................................... 21 0 20 8.10 162 162 0 0 0 0 0
...............................................................................................................................................................................................................TTGTTCAGTCGCAGAGAGGCG....................... 21 0 20 8.05 161 147 0 0 0 14 0
...........................................................................................................................................................................................................TTGGTTGTTCAGTCGCAGAG............................ 20 0 20 7.95 159 153 0 0 0 6 0
.................................................................................................................................................................................................................GTTCAGTCGCAGAGAGGCGCA..................... 21 0 20 7.65 153 59 0 87 0 7 0
.......................................................................................................................TGCGACAGGCCCCCGGAGGCC............................................................................................................... 21 0 20 6.10 122 122 0 0 0 0 0
.........................................................................................................................CGACAGGCCCCCGGAGGCCCC............................................................................................................. 21 0 20 5.55 111 111 0 0 0 0 0
....................................................................................................................TCTTGCGACAGGCCCCCGGA................................................................................................................... 20 0 20 4.60 92 91 0 0 1 0 0
........................................................................................TCATACAACGAAAATGGACGC.............................................................................................................................................. 21 0 20 4.50 90 90 0 0 0 0 0
..............................................................................................................................................................................................................GTTGTTCAGTCGCAGAGAGGC........................ 21 0 20 4.30 86 0 86 0 0 0 0
.........................................................................................................................................................................................................TTTTGGTTGTTCAGTCGCAGA............................. 21 0 20 4.30 86 86 0 0 0 0 0
...............................................................................................................................................................................TTTACGCTCATAATCTCATTT....................................................... 21 0 20 4.05 81 78 2 1 0 0 0
....................................................................................................................TCTTGCGACAGGCCCCCGGAG.................................................................................................................. 21 0 20 3.45 69 64 5 0 0 0 0
...............................................................................................................................................................................................................................AGGCGCATCATCAAGAAGGTT....... 21 0 20 3.05 61 36 0 25 0 0 0
.............................................................................................................................................................................................................................AGAGGCGCATCATCAAGAAGG......... 21 0 20 3.00 60 60 0 0 0 0 0
..........................................................................................................................................................................................................TTTGGTTGTTCAGTCGCAGAG............................ 21 0 20 2.95 59 0 59 0 0 0 0
.........................................................................................CATACAACGAAAATGGACGCA............................................................................................................................................. 21 0 20 2.85 57 57 0 0 0 0 0
...........................................................................................................................................................................................................TTGGTTGTTCAGTCGCAGA............................. 19 0 20 2.65 53 14 35 0 0 4 0
..........................................................................................................................................................................................................TTTGGTTGTTCAGTCGCAGAGA........................... 22 0 20 2.40 48 9 39 0 0 0 0
........................................................................................................................................................................................................................CGCAGAGAGGCGCATCATCA............... 20 0 20 2.15 43 30 10 0 0 3 0
..........................................................................................ATACAACGAAAATGGACGCA............................................................................................................................................. 20 0 20 2.10 42 15 0 23 0 4 0
..............................................................................................................................................................................................................GTTGTTCAGTCGCAGAGAGG......................... 20 0 20 2.10 42 42 0 0 0 0 0
..................................................................................................................................................................................................................................CGCATCATCAAGAAGGTTCTT.... 21 0 20 2.00 40 0 37 0 0 3 0
..............................................................................................................................................................................................................GTTGTTCAGTCGCAGAGAG.......................... 19 0 20 1.95 39 9 0 30 0 0 0
....................................................................................................................TCTTGCGACAGGCCCCCGGAGT................................................................................................................. 22 1 20 1.60 32 32 0 0 0 0 0
....................................................................................................................TCTTGCGACAGGCCCCCGGAGGCC............................................................................................................... 24 0 20 1.50 30 0 0 0 30 0 0
....................................................................................................................TCTTGCGACAGGCCCCCGG.................................................................................................................... 19 0 20 1.50 30 30 0 0 0 0 0
......................................................................................................................................................TCTTACTCTCATTCTTACGCT................................................................................ 21 0 20 1.50 30 26 0 4 0 0 0
..........................................................................................................................GACAGGCCCCCGGAGGCCCCA............................................................................................................ 21 0 20 1.45 29 29 0 0 0 0 0
...............................................................................................................................................................................................................TTGTTCAGTCGCAGAGAGGC........................ 20 0 20 1.45 29 28 0 0 1 0 0
.......................................................................................TTCATACAACGAAAATGGACG............................................................................................................................................... 21 0 20 1.40 28 28 0 0 0 0 0
........................................................................................................................GCGACAGGCCCCCGGAGGCCC.............................................................................................................. 21 0 20 1.35 27 27 0 0 0 0 0
....................................................................................................................TCTTGCGACAGGCCCCCGGAGGCCCC............................................................................................................. 26 0 20 1.30 26 0 0 0 26 0 0
...........................................................................................................................ACAGGCCCCCGGAGGCCCCAG........................................................................................................... 21 0 20 1.30 26 26 0 0 0 0 0
.......................................................................CATATAGACTTCTCATTTCAT............................................................................................................................................................... 21 0 20 1.25 25 19 5 1 0 0 0
............................................................................................................................................................................ATTTTTACGCTCATAATCTCA.......................................................... 21 0 20 1.20 24 24 0 0 0 0 0
.................................................................................................................................................................................TACGCTCATAATCTCATTTA...................................................... 20 0 20 1.15 23 23 0 0 0 0 0
................................................................................................................AATTTCTTGCGACAGGCCCC....................................................................................................................... 20 0 20 1.15 23 23 0 0 0 0 0
.....................................................................................................................CTTGCGACAGGCCCCCGGA................................................................................................................... 19 0 20 1.10 22 22 0 0 0 0 0
.................................................................................................................ATTTCTTGCGACAGGCCCCCGT.................................................................................................................... 22 1 20 1.05 21 17 4 0 0 0 0
..........................................................................ATAGACTTCTCATTTCATACA............................................................................................................................................................ 21 0 20 1.05 21 21 0 0 0 0 0
.............................................................................................................................................................................................................GGTTGTTCAGTCGCAGAGAGG......................... 21 0 20 1.00 20 0 20 0 0 0 0
...................................................................................................................TTCTTGCGACAGGCCCCCGGAGGC................................................................................................................ 24 0 20 1.00 20 0 0 0 20 0 0
.....................................................................................................................................................................................................................................ATCATCAAGAAGGTTCTTCTG. 21 0 20 0.95 19 0 0 12 0 7 0
............................................................................................................................................................................................................TGGTTGTTCAGTCGCAGAGA........................... 20 0 20 0.90 18 0 18 0 0 0 0
................................................................................................................................................................................................................TGTTCAGTCGCAGAGAGGCG....................... 20 0 20 0.90 18 18 0 0 0 0 0
...................................................................................................................................................................................................TAACTTTTTTGGTTGTTCAGT................................... 21 0 20 0.80 16 0 0 16 0 0 0
........................................................................................................................................................TTACTCTCATTCTTACGCTCA.............................................................................. 21 0 20 0.80 16 0 16 0 0 0 0
........................................................................................................................................................................................................TTTTTGGTTGTTCAGTCGCA............................... 20 0 20 0.75 15 15 0 0 0 0 0
....................................................................................................AATGGACGCAAAAATTTCTTG.................................................................................................................................. 21 0 20 0.75 15 0 15 0 0 0 0
........................................................................................................................................................................................................TTTTTGGTTGTTCAGTCGCAGA............................. 22 0 20 0.70 14 0 12 0 0 2 0
..................................................................................................................TTTCTTGCGACAGGCCCCCGT.................................................................................................................... 21 1 20 0.70 14 14 0 0 0 0 0
.................................................................................................................................................................................................................GTTCAGTCGCAGAGAGGCGC...................... 20 0 20 0.70 14 4 10 0 0 0 0
..............................................................................................................................................................................................................................GAGGCGCATCATCAAGAAGGT........ 21 0 20 0.65 13 13 0 0 0 0 0
.........................................................................................CATACAACGAAAATGGACGC.............................................................................................................................................. 20 0 20 0.65 13 12 0 1 0 0 0
................................................................................................................AATTTCTTGCGACAGGCCCCC...................................................................................................................... 21 0 20 0.60 12 0 12 0 0 0 0
...........................................................................................................................................................................................................TTGGTTGTGCAGTCGCAGAGA........................... 21 1 20 0.60 12 12 0 0 0 0 0
....................................................................................................................................................................................................................................CATCATCAAGAAGGTTCTTCT.. 21 0 20 0.60 12 0 6 5 1 0 0
..................................................................................................................TTTCTTGCGACAGGCCCCCGG.................................................................................................................... 21 0 20 0.50 10 0 10 0 0 0 0
...............................................................................................................................................................................................................TTGTTCAGTCGCAGAGAGGCGT...................... 22 1 20 0.50 10 10 0 0 0 0 0
..............................................................................................................AAAATTTCTTGCGACAGGCCC........................................................................................................................ 21 0 20 0.50 10 0 0 0 10 0 0
..........................................................................................................................................................................................................................CAGAGAGGCGCATCATCAAG............. 20 0 20 0.50 10 0 0 10 0 0 0
..........................................................................................................................................................................................................TTTGGTTGTTCAGTCGCAGA............................. 20 0 20 0.50 10 10 0 0 0 0 0
.........................................................................................................................CGACAGGCCCCCGGAGGCCCCA............................................................................................................ 22 0 20 0.45 9 9 0 0 0 0 0
.........................................................................................................................................................................................................TTTTGGTTGTTCAGTCGCAG.............................. 20 0 20 0.45 9 7 0 2 0 0 0
.......................................................................................................................................................CTTACTCTCATTCTTACGCT................................................................................ 20 0 20 0.45 9 9 0 0 0 0 0
...................................................................................................................................................................................................................TCAGTCGCAGAGAGGCGCATC................... 21 0 20 0.45 9 9 0 0 0 0 0
.....................................................................................................................CTTGCGACAGGCCCCCGG.................................................................................................................... 18 0 20 0.45 9 9 0 0 0 0 0
..............................................................................................AACGAAAATGGACGCAAAA.......................................................................................................................................... 19 0 20 0.45 9 0 0 6 0 3 0
..........................................................................................................................................................................................................................CAGAGAGGCGCATCATCAAGA............ 21 0 20 0.45 9 0 6 0 0 3 0
.......................................................................................................................................................................................................TTTTTTGGTTGTTCAGTCGC................................ 20 0 20 0.40 8 8 0 0 0 0 0
....................................................................CAACATATAGACTTCTCATTTC................................................................................................................................................................. 22 0 20 0.40 8 8 0 0 0 0 0
......................................................................................................................TTGCGACAGGCCCCCGGA................................................................................................................... 18 0 20 0.40 8 8 0 0 0 0 0
.............................................................................................................................................................................................................GGTTGTTCAGTCGCAGAGAG.......................... 20 0 20 0.40 8 8 0 0 0 0 0
.....................................................................................................................................................................................................ACTTTTTTGGTTGTTCAGTCG................................. 21 0 20 0.35 7 0 0 7 0 0 0
................................................................................................................................................................................................................TGTTCAGTCGCAGAGAGGC........................ 19 0 20 0.35 7 0 7 0 0 0 0
............................................................................................................................................................................................................TGGTTGTTCAGTCGCAGAGAGG......................... 22 0 20 0.35 7 7 0 0 0 0 0
...........................................................................................................................................................................CATTTTTACGCTCATAATCTC........................................................... 21 0 20 0.35 7 7 0 0 0 0 0
..........................................................................................................................................................................................AATCTCATTTAACTTTTTTGG............................................ 21 0 20 0.30 6 6 0 0 0 0 0
...............................................................................................................................................................................................................TTGTTCAGTCGCAGAGAGGCT....................... 21 1 20 0.30 6 0 1 5 0 0 0
........................................................................................................................GCGACAGGCCCCCGGAGG................................................................................................................. 18 0 20 0.30 6 6 0 0 0 0 0
........................................................................ATATAGACTTCTCATTTCAT............................................................................................................................................................... 20 0 20 0.30 6 6 0 0 0 0 0
.............................................................................................................................................................................TTTTTACGCTCATAATCTCATT........................................................ 22 0 20 0.30 6 6 0 0 0 0 0
..........................................................................................................................................................................................................TTTGGTTGTTCAGTCGCAGAGAGGCGC...................... 27 0 20 0.30 6 1 0 0 4 0 1
...................................................................................................................................CCGGAGGCCCCAGAGAGAATC................................................................................................... 21 0 20 0.30 6 0 5 0 0 1 0
...................................................................................................................................................................CTTACGCTGATTTTTACGCTC................................................................... 21 1 20 0.30 6 6 0 0 0 0 0
.........................................................................................................................CGACAGGCCCCCGGAGGCCC.............................................................................................................. 20 0 20 0.30 6 6 0 0 0 0 0
....................................................................................................................TCTTGCGACAGGCCCCCGGAGG................................................................................................................. 22 0 20 0.25 5 0 0 0 5 0 0
............................................................................................................................................................................................................TGGTTGTTCAGTCGCAGAGAGGCGC...................... 25 0 20 0.25 5 0 0 0 5 0 0
.............................................................................................................AAAAATTTCTTGCGACAGGCC......................................................................................................................... 21 0 20 0.25 5 0 0 0 5 0 0
..........................................................................................................................................................................................................TTTGGTTGTTCAGTCGCAGAGAGGCG....................... 26 0 20 0.25 5 4 0 0 1 0 0
...................................................................................................................................................................CTTACGCTCATTTTTACGCTC................................................................... 21 0 20 0.25 5 0 0 5 0 0 0
............................................................................................................................................................................................................................GAGAGGCGCATCATCAAGA............ 19 0 20 0.25 5 3 2 0 0 0 0
...............................................................................................................................................................CATTCTTACGCTCATTTTTAC....................................................................... 21 0 20 0.25 5 3 2 0 0 0 0
...............................................................................................................................................................................................................TTGTTCAGGCGCAGAGAGGC........................ 20 1 20 0.25 5 5 0 0 0 0 0
.........................................................................................CATACAACGAAAATGGACGCAAA........................................................................................................................................... 23 0 20 0.25 5 5 0 0 0 0 0
..........................................................................................................................................................................................................TTTGGTTGTTCAGTCGCAGAGAGG......................... 24 0 20 0.25 5 0 0 2 0 0 3
...........................................................................................................................................................................................................TTGGTTGTTCAGTCGCAGAGAG.......................... 22 0 20 0.20 4 0 4 0 0 0 0
...............................................................................................................................................................................TTTACGCTCATAATCTCATTTAACT................................................... 25 0 20 0.20 4 2 0 0 2 0 0
.............................................................................................................................................................CTCATTCTTACGCTCATTTTT......................................................................... 21 0 20 0.20 4 0 0 4 0 0 0
...............................................................................................................................................................................................................TTTTTCAGTCGCAGAGAGG......................... 19 1 20 0.20 4 0 4 0 0 0 0
.........................................................................................................................CGACAGGCCCCCGGAGGCCCCAG........................................................................................................... 23 0 20 0.20 4 3 1 0 0 0 0
....................................................................................................................................................................................GCTCATAATCTCATTTAACT................................................... 20 0 20 0.20 4 4 0 0 0 0 0
...................................................................................................................TTCTTGCGACAGGCCCCCGGAGGCC............................................................................................................... 25 0 20 0.20 4 4 0 0 0 0 0
..................................................................................................................................................................................................................TTCAGTCGCAGAGAGGCGCATT................... 22 1 20 0.20 4 0 0 4 0 0 0
...........................................................................................................................................................................................................................AGAGAGGCGCATCATCAAG............. 19 0 20 0.20 4 0 1 3 0 0 0
...................................................................................................................TGCTTGCGACAGGCCCCCGGAGGCCC.............................................................................................................. 26 1 20 0.20 4 0 0 0 4 0 0
........................................................................................................................................................................................................TTTTTGGTTGTTCAGTCGCAGAGAGG......................... 26 0 20 0.20 4 2 0 1 1 0 0
...........................................................................................................................................................................................................TTGGTTGTTCAGTCGCAGAGAGGC........................ 24 0 20 0.20 4 0 0 0 4 0 0
......................................................................................................................TTGCGACAGGCCCCCGGAG.................................................................................................................. 19 0 20 0.20 4 4 0 0 0 0 0
..............................................................................................................................................................................................................GTTGTTCAGTCGCAGAGAGGT........................ 21 1 20 0.20 4 0 0 4 0 0 0
..............................................................................................................................................................................................................GTTGTTCAGTCGCAGAGAGGCGT...................... 23 1 20 0.20 4 0 4 0 0 0 0
.........................................................................................................................................................................................................TTTTGGTTGTTCAGTCGCA............................... 19 0 20 0.20 4 4 0 0 0 0 0
..........................................................................................................................................................................................................................CGGAGAGGCGCATCATCAAGA............ 21 1 20 0.20 4 3 0 1 0 0 0
.........................................................................TATAGACTTCTCATTTCATA.............................................................................................................................................................. 20 0 20 0.20 4 4 0 0 0 0 0
...........................................................................................................................................................CTCTCATTCTTACGCTCATT............................................................................ 20 0 20 0.20 4 4 0 0 0 0 0
.............................................................................................................................................................................................................GGTTGTTCAGTCGCAGAGAGGC........................ 22 0 20 0.15 3 3 0 0 0 0 0
..........................................................................................................................................................................................................TTTGGTTGTTCAGTCGCAGAGAGGCGCA..................... 28 0 20 0.15 3 2 0 0 1 0 0
.........................................................................................CATACAACGAAAATGGACG............................................................................................................................................... 19 0 20 0.15 3 0 2 0 0 1 0
.................................................................................................................................................................................................................GTTCAGTCGCGGAGAGGCGCA..................... 21 1 20 0.15 3 0 0 3 0 0 0
..................................................................................................................TGTCTTGCGACAGGCCCCCGGAGGC................................................................................................................ 25 1 20 0.15 3 0 0 0 3 0 0
..........................................................................................................................................................................TCATTTTTACGCTCATAATCT............................................................ 21 0 20 0.15 3 2 0 1 0 0 0
..................................................................................................................................................................................................................................CGCATCATCAAGAAGGTTCTTCTGC 25 0 20 0.15 3 0 0 0 3 0 0
........................................................................................................................................................................................................................CGCAGAGAGGCGCATCATC................ 19 0 20 0.15 3 3 0 0 0 0 0
............................................................................................................................................................................................................TGGTTGTTCAGTCGCAGAGAGT......................... 22 1 20 0.15 3 0 3 0 0 0 0
...............................................................................................................................................................................TTTACGCTAATAATCTCATTT....................................................... 21 1 20 0.15 3 3 0 0 0 0 0
.............................................................................................................................................................................................................................AGAGGCGCATCATCAAGAA........... 19 0 20 0.15 3 3 0 0 0 0 0
................................................................................................................AATTTCTTGCGACAGGCCCCCG..................................................................................................................... 22 0 20 0.15 3 3 0 0 0 0 0
.......................................................................CATATAGACTTCTCATTTCA................................................................................................................................................................ 20 0 20 0.15 3 3 0 0 0 0 0
.......................................................................................................................................................................................................TTTTTTGGGTGTTCAGTCGCA............................... 21 1 20 0.15 3 3 0 0 0 0 0
.........................................................................................CATACAACGAAAATGGACGCAAAA.......................................................................................................................................... 24 0 20 0.15 3 0 0 0 3 0 0
..................................................................................................................TTTCTTGCGACAGGCCCCCGGAG.................................................................................................................. 23 0 20 0.15 3 3 0 0 0 0 0
..............................................................................................................................................................................TTTTACGCGCATAATCTCATT........................................................ 21 1 20 0.15 3 3 0 0 0 0 0
.......................................................................................................................................................CTTACTCTGATTCTTACGCTC............................................................................... 21 1 20 0.15 3 3 0 0 0 0 0
.....................................................................................................................................................................TACGCTCATTTTTACGCTCA.................................................................. 20 0 20 0.15 3 3 0 0 0 0 0
...............................................................................................................................................................................................................TTGTTCAGTCGCAGAGAGGCGA...................... 22 1 20 0.15 3 0 3 0 0 0 0
................................................................................................................................................................................................................TGTTCAGTCGCAGAGAGGCGCTT.................... 23 1 20 0.15 3 3 0 0 0 0 0
...............................................................................................................................................................................................................TTGTTCAGTCGCAGAGAGGAG....................... 21 1 20 0.15 3 0 2 1 0 0 0
...........................................................................................................................................................................................................TTGGTTGTTCAGTCGCATAGA........................... 21 1 20 0.15 3 0 3 0 0 0 0
.....................................................................................................................CTTGCGACAGGCCCCCGGAGGC................................................................................................................ 22 0 20 0.15 3 3 0 0 0 0 0
....................................................................................................................................................................................................................................CATCATCAAGAAGGTTCTTCTG. 22 0 20 0.15 3 0 0 3 0 0 0
.........................................................................................................................................................................................................TTTTGGTTGTTCGGTCGCAGA............................. 21 1 20 0.15 3 0 0 3 0 0 0
.....................................................................................................................................................ATCTTACTCTCATTCTTACGCT................................................................................ 22 0 20 0.15 3 3 0 0 0 0 0
.........................................................................................................................................................................................................................GCAGAGAGGCGCATCATCA............... 19 0 20 0.15 3 3 0 0 0 0 0
...........................................................................................................................................................................................................TTGGTTGTTCAGTCGCAGAGAGG......................... 23 0 20 0.15 3 0 0 1 2 0 0
...........................................................................................TACAACGAAAATGGACGCA............................................................................................................................................. 19 0 20 0.15 3 3 0 0 0 0 0
.........................................................................................CATACAACGAAAATGGACGCAAAAATTT...................................................................................................................................... 28 0 20 0.15 3 0 0 0 3 0 0
.....................................................................................................................................................................................................................AGTCGCAGAGAGGCGCATCAT................. 21 0 20 0.10 2 0 0 2 0 0 0
......................................................................................................................TTGCGACAGGCCCCCGGAGGCCCC............................................................................................................. 24 0 20 0.10 2 2 0 0 0 0 0
..................................................................................................................................................................................................................TTCAGTCGCAGAGAGGCGC...................... 19 0 20 0.10 2 0 0 0 0 2 0
..................................................................................................................................................................................................................................CGCATCATCAAGAAGGTTCTTCT.. 23 0 20 0.10 2 0 0 0 2 0 0
......................................................................................................................TTGCGACAGGCCCCCGGT................................................................................................................... 18 1 20 0.10 2 2 0 0 0 0 0
..............................................................................................................................................................................................................................GAGGCGCAGCATCAAGAAGGT........ 21 1 20 0.10 2 2 0 0 0 0 0
..........................................................................................ATACAACGAAAATGGACGC.............................................................................................................................................. 19 0 20 0.10 2 0 2 0 0 0 0
......................................................................................................................TTGCGACAGGCCCCCGGAGGCCCCAGA.......................................................................................................... 27 0 20 0.10 2 0 0 0 2 0 0
.......................................................................................................................TGCGACAGGCCCCCGGAGGCCC.............................................................................................................. 22 0 20 0.10 2 2 0 0 0 0 0
.....................................................................................................................CTTGCGACAGGCCCCCGGAGGCC............................................................................................................... 23 0 20 0.10 2 0 0 0 2 0 0
..............................................................................................................................................................................................................................GAGGCGCATCATCAAGAAGGTT....... 22 0 20 0.10 2 2 0 0 0 0 0
................................................................................................................................................................................................................TGTTCAGTCGCGGAGAGGC........................ 19 1 20 0.10 2 0 2 0 0 0 0
...............................................................................................................................................................................................................TTGTTCAGTCGCAGAGAGGCGC...................... 22 0 20 0.10 2 0 0 0 0 1 1
.................................................................................................................................................................................TACGCTCATAATCTCATTTAAC.................................................... 22 0 20 0.10 2 0 0 0 2 0 0
.................................................................ATACAACATATAGACTTCTCA..................................................................................................................................................................... 21 0 20 0.10 2 2 0 0 0 0 0
.......................................................................................................................................................................................................TTTTTTGGTTGTTCGGTCGCA............................... 21 1 20 0.10 2 0 0 2 0 0 0
...............................................................................................................................................................................................................TTGTTCAGTCGCGGAGAGGCG....................... 21 1 20 0.10 2 0 0 2 0 0 0
...........................................................................................................................................CCCAGAGAGAGTCTTACTC............................................................................................. 19 1 20 0.10 2 0 2 0 0 0 0
..........................................................................................................................................................................................................................CAGAGAGGCGCATCATCAAGAAGG......... 24 0 20 0.10 2 0 2 0 0 0 0
............................................................................................................................................................................................................TGGTTGTTCAGTCGCAGAGAG.......................... 21 0 20 0.10 2 0 0 0 0 1 1
...........................................................................................................................................................................................................................GGAGAGGCGCATCATCAAGA............ 20 1 20 0.10 2 2 0 0 0 0 0
...............................................................................................................................................................................................................TTGTTCAGCCGCAGAGAGGCG....................... 21 1 20 0.10 2 2 0 0 0 0 0
...............................................................................................................................................................................................................TTGTTCAGTCGAAGAGAGGCG....................... 21 1 20 0.10 2 0 2 0 0 0 0
........................................................................................................................................................................................................................CGCAGAGAGGCGCATCATCAAG............. 22 0 20 0.10 2 2 0 0 0 0 0
.................................................................................................................................CCCCGGAGGCCCCAGAGAGAA..................................................................................................... 21 0 20 0.10 2 2 0 0 0 0 0
..........................................................................................................................................................................................................TTTGGTTGATCAGTCGCAGAG............................ 21 1 20 0.10 2 2 0 0 0 0 0
...................................................................................................................................................................................................TAACTTTTTTGGTTGTTCAG.................................... 20 0 20 0.10 2 2 0 0 0 0 0
............................................................................................................................................................TCTCATTCTTACGCTCATTT........................................................................... 20 0 20 0.10 2 2 0 0 0 0 0
...............................................................................................................................................................................................................TTGTTCAGTCGCAGACAGG......................... 19 1 20 0.10 2 0 1 0 0 1 0
.........................................................................................CATACAACGAAAATGGACGCAA............................................................................................................................................ 22 0 20 0.10 2 0 0 1 1 0 0
......................................................................................................................................................................................................CTTTTTTGGTTGTTCAGTCG................................. 20 0 20 0.10 2 0 1 0 0 1 0
.............................................................................................................................................................................TTTTTACGCTCATAATCTCA.......................................................... 20 0 20 0.10 2 2 0 0 0 0 0
...........................................................................................................................................................................................................TTGGTTGTTCAGTCGAAGAG............................ 20 1 20 0.10 2 0 0 2 0 0 0
...................................................................................................................TTCTTGCGACAGGCCCCCGGAGGCCCT............................................................................................................. 27 1 20 0.10 2 0 0 0 2 0 0
......................................................................................................................................................................................................................................TCATCAAGAAGGTTCTTCTGC 21 0 20 0.10 2 0 1 0 0 1 0
...........................................................................................................................ACAGGCCCCCGGAGGCCCCA............................................................................................................ 20 0 20 0.10 2 2 0 0 0 0 0
........................................................................................................................................................................................................TTTTTGGTTGTTCAGTCGCAGAGAG.......................... 25 0 20 0.10 2 1 0 1 0 0 0
................................................................................................................................................................................................ATTTAACTTTTTTGGTTGTTCAGTCGCA............................... 28 0 20 0.10 2 2 0 0 0 0 0
................................................................................................................................................................................................................TGTTCAGTCGCAGAGAGG......................... 18 0 20 0.10 2 0 0 2 0 0 0
............................................................................................................................................................................................................TGGGTGTTCAGTCGCAGAG............................ 19 1 20 0.10 2 1 0 0 0 1 0
............................................................................................................................................................TCTCATTCTTACGCTCATTTT.......................................................................... 21 0 20 0.10 2 2 0 0 0 0 0
.................................................................................................................................................................................................................................GCGCATCATCAAGAAGGTTCTTCTG. 25 0 20 0.10 2 1 1 0 0 0 0
.........................................................................................................................................................................................................TTTTGGTTGTTCGGTCGCGGA............................. 21 2 20 0.10 2 0 0 2 0 0 0
...........................................................................................................................................................................................................TTGGTTGTCCAGTCGCAGAG............................ 20 1 20 0.10 2 2 0 0 0 0 0
.......................................................................................................................TGCGACAGGCCCCCGGAGGCCCCAGA.......................................................................................................... 26 0 20 0.10 2 2 0 0 0 0 0
.................................................................................................................................................................................................................GTTCAGTCGCAGAGGGGCGCA..................... 21 1 20 0.10 2 0 0 2 0 0 0
...................................................................................................................TGCTTGCGACAGGCCCCCGGAGGCCCC............................................................................................................. 27 1 20 0.10 2 0 0 0 2 0 0
.............................................................................................................................................................................................CTCATTTAACTTTTTTGGTTG......................................... 21 0 20 0.10 2 2 0 0 0 0 0
.........................................................................................................................................................................................................TTTTGGTTGTTCAGTCGAAGA............................. 21 1 20 0.10 2 0 0 2 0 0 0
..............................................................................................AACGAAAATGGACGCAAAAA......................................................................................................................................... 20 0 20 0.10 2 0 2 0 0 0 0
.........................................................................................................................................................................................TAATCTCATTTAACTTTTTTGGTTGT........................................ 26 0 20 0.10 2 0 0 0 2 0 0
.....................................................................................................................................................................................................................................ATCATCAAGAGGGTTCTTCTGC 22 1 20 0.10 2 0 2 0 0 0 0
...............................................................................................................................................................................................................TTGTTCAGTCGCAGATAGGCGT...................... 22 2 20 0.10 2 0 0 2 0 0 0
..........................................................................................................................................................................................................TTTGGTTGTTCGGTCGCAGAG............................ 21 1 20 0.10 2 0 2 0 0 0 0
....................................................................................................................................................................TTACGCTCATTTTTACGCTCA.................................................................. 21 0 20 0.10 2 0 2 0 0 0 0
...................................................................................................................................................................................................................................GCATCATCAAGAAGGTTCTTC... 21 0 20 0.10 2 0 2 0 0 0 0
.......................................................................................................................................................CTTACTCTCATTCTTACGCTCA.............................................................................. 22 0 20 0.10 2 2 0 0 0 0 0
..............................................................................................................................................................TCATTCTTACGCTCATTTTT......................................................................... 20 0 20 0.10 2 2 0 0 0 0 0
......................................................................................................................TTGCGACAGGCCCCCGGAGGCCCCAGAA......................................................................................................... 28 1 20 0.10 2 0 0 0 2 0 0
..............................................................................................................................................................................................................GTTGTTCAGTCACAGAGAGGC........................ 21 1 20 0.05 1 0 1 0 0 0 0
......................................................................................................................................................................................................................................TCATCAAGAGGGTTCTTCTGT 21 2 20 0.05 1 1 0 0 0 0 0
....................................................................................................................................................................................................AACTTTTTTGGTTGTTCAGTCGCAGA............................. 26 0 20 0.05 1 1 0 0 0 0 0
.........................................................................................................................................................................................................TTTTGGTTGTTCAGTCGCAGAG............................ 22 0 20 0.05 1 0 0 1 0 0 0
..............................................................................................................................................................................................................GTTGTTCATTCGCAGAGAGG......................... 20 1 20 0.05 1 1 0 0 0 0 0
........................................................................................................................................................................................................................CGCAGAGAGGCTCATCATCA............... 20 1 20 0.05 1 0 0 1 0 0 0
...............................................................................................................................................................................................................................GGGCGCATAATCAAGAAGGTT....... 21 2 20 0.05 1 0 1 0 0 0 0
......................................................................................................................TTGTGACAGGCCCCCGGAGGCCC.............................................................................................................. 23 1 20 0.05 1 0 0 0 1 0 0
.....................................................................................................................................................................TACGCTCATTTTTACGCTCAT................................................................. 21 0 20 0.05 1 0 0 0 0 1 0
..........................................................................................................................................................................................................TTTGGTTGTTCAGTCGCGGAG............................ 21 1 20 0.05 1 0 1 0 0 0 0
...............................................................................................................................................................................................................................AGGCGCATCATCAAGAAGG......... 19 0 20 0.05 1 0 1 0 0 0 0
.................................................................................................................................CCCCGGAGGCCCCAGAGAGA...................................................................................................... 20 0 20 0.05 1 1 0 0 0 0 0
...........................................................................................................................................................................................................TTGGTTGTTCAGTCCCAGAGA........................... 21 1 20 0.05 1 0 0 1 0 0 0
...........................................................................................................................................................................................................TTGGTTGTTCAGTCGCAGTGA........................... 21 1 20 0.05 1 0 1 0 0 0 0
...................................................................................................................TTCTTGCGACAGCCCCCCGGA................................................................................................................... 21 1 20 0.05 1 1 0 0 0 0 0
......................................................................................................................................................................................................CTTTTTTGGTTGTTCAGTCGCA............................... 22 0 20 0.05 1 0 0 0 0 1 0
...............................................................................................................................................................................TTTACGCTCATAATCTCATTTAAC.................................................... 24 0 20 0.05 1 1 0 0 0 0 0
............................................................................................................................................................................................................TGGTTGTTCAGTCGCAGAGAGGCGCAT.................... 27 0 20 0.05 1 1 0 0 0 0 0
..........................................................................................................................................................................................................TTTGGTTGTTCAGTCGCAG.............................. 19 0 20 0.05 1 0 1 0 0 0 0
................................................................................................................................................................................................................TGTTCAGTCGCAGAGAGGCGCATCATC................ 27 0 20 0.05 1 0 0 0 1 0 0
................................................................................................................................................................................................................AGTTCAGTCGCAGAGAGGC........................ 19 1 20 0.05 1 1 0 0 0 0 0
......................................................................................................................................................................................................CTTTTTTGGTTGTTCAGTCTC................................ 21 1 20 0.05 1 0 1 0 0 0 0
..................................................................................................................CTTCTTGCCACAGGCCCCCGGAGGCCCC............................................................................................................. 28 2 20 0.05 1 1 0 0 0 0 0
.....................................................................................................................CTTGCGACAGGCCCCCTGAGG................................................................................................................. 21 1 20 0.05 1 0 1 0 0 0 0
......................................................................................................................TTCCGACAGGCCCCCGGAGGCC............................................................................................................... 22 1 20 0.05 1 0 0 0 1 0 0
...................................................................................................................TTCTTGCGCCAGGCCCCCGG.................................................................................................................... 20 1 20 0.05 1 1 0 0 0 0 0
.................................................................................................................GTTTCTTGCGACAGGCCCCCGGT................................................................................................................... 23 2 20 0.05 1 1 0 0 0 0 0
............................................................................................................................................................................................................TGGTTGTTCAGTCGCAGAGGGG......................... 22 1 20 0.05 1 0 0 1 0 0 0
.................................................................................................................................................................................................TTTAACTTTTTTCGTTGTTCA..................................... 21 1 20 0.05 1 0 0 0 0 1 0
...............................................................................................................................................................................................................TTTTTCAGTCGCAGAGAGGCG....................... 21 1 20 0.05 1 0 0 0 0 1 0
.....................................................................................................ATGGACGCAGGGATTTCTTGC................................................................................................................................. 21 3 20 0.05 1 0 0 1 0 0 0
.....................................................................................................................CTTGCGACAGGCCCCCGGAGGCCCCAG........................................................................................................... 27 0 20 0.05 1 1 0 0 0 0 0
.................................................................................................................CTTTCTTGCGACAGGCCCCCGGAGGCC............................................................................................................... 27 1 20 0.05 1 0 0 0 1 0 0
..............................................................................................................................................................................................TCATTTAACTTTTTTGGTTGT........................................ 21 0 20 0.05 1 0 0 1 0 0 0
.........................................................................................................................................................................................................TTTTGGCTGTTCAGTCGCAGA............................. 21 1 20 0.05 1 0 0 1 0 0 0
.........................................................................................................................................................................................................TTTTGGTTGTTCCGTCGCAGA............................. 21 1 20 0.05 1 0 1 0 0 0 0
...................................................................................................................................................................................CGCTCATAGTCTCATTTAACT................................................... 21 1 20 0.05 1 1 0 0 0 0 0
.........................................................................................................................................................................................................TTTTGGTTGTTCAGTCGCAGAGAGGCG....................... 27 0 20 0.05 1 1 0 0 0 0 0
...............................................................................................................................................................................................................TTGTTCAGTCGCAGAGAGGCGCT..................... 23 1 20 0.05 1 0 0 1 0 0 0
.................................................................................................................................................................................................TTTAACTTTTTTGGTTGTTCAGT................................... 23 0 20 0.05 1 0 1 0 0 0 0
...................................................................................................................................................................................................TGGCTTTTTTGGTTGTTCAGTC.................................. 22 2 20 0.05 1 0 0 1 0 0 0
..................................................................................................................................................................................................................TTCAGTCGCAGAGAGGCGCATCATCAAG............. 28 0 20 0.05 1 1 0 0 0 0 0
...............................................................................................ACGAAAATGGACGCAAAAATT....................................................................................................................................... 21 0 20 0.05 1 0 0 0 1 0 0
................................................................................................................................................................................................................TGTTCAGTCGCATAGAGGCG....................... 20 1 20 0.05 1 0 1 0 0 0 0
......................................................................................TTTCATACAACGAAAATGGACGCAA............................................................................................................................................ 25 0 20 0.05 1 1 0 0 0 0 0
.....................................................................................................................CTTGCGACAGGCCCCCGGGGG................................................................................................................. 21 1 20 0.05 1 1 0 0 0 0 0
.................................................................................................................TTTTCTTGCGACAGGCCCCCGGA................................................................................................................... 23 1 20 0.05 1 0 0 0 1 0 0
............................................................................................................................................................................................................TGCTTGTTCACTCGCAGAGAGG......................... 22 2 20 0.05 1 0 0 0 0 0 1
................................................................................................................................................................................TTACGCTCATAATCTCATTTA...................................................... 21 0 20 0.05 1 0 0 1 0 0 0
.........................................................................................................................................................................................................TTTTGGTTGTTCAGTCCCAGA............................. 21 1 20 0.05 1 0 1 0 0 0 0
...............................................................................................................................................................................................................TTGTTCAGTCGCAGATAGG......................... 19 1 20 0.05 1 0 0 1 0 0 0
..........................................................................................................................................................................................................TTTGGTTGTTCAGTCGCAGAGAGGA........................ 25 1 20 0.05 1 0 1 0 0 0 0
..............................................................................................................................................................................................................GTTGCTCAGTCGCAGAGAGCC........................ 21 2 20 0.05 1 0 0 0 0 1 0
................................................................................................................................................................................................................................GGCGCATCATCAAGAAGGT........ 19 0 20 0.05 1 0 0 1 0 0 0
....................................................................................................................................................................TTACGCTCATTTTTACGCTCAT................................................................. 22 0 20 0.05 1 0 0 1 0 0 0
..............................................................................................................AAAATTTCTTGCGACAGGCC......................................................................................................................... 20 0 20 0.05 1 0 0 1 0 0 0
...............................................................................................................................................................................................................TTGTTCAGTCGTAGAGAGGCG....................... 21 1 20 0.05 1 0 0 1 0 0 0
..............................................................................................................................................................................................................GTTGTTCAGTCGCGGAGAGGCG....................... 22 1 20 0.05 1 1 0 0 0 0 0
.......................................................................................................................TGCGACAGGCCCCCGGAGT................................................................................................................. 19 1 20 0.05 1 1 0 0 0 0 0
......................................................................................................................................................................................................................................TCATCAAGAAGGTTCTTCTG. 20 0 20 0.05 1 1 0 0 0 0 0
..............................................................................................................................................................................................................GTTGTTCAGTCGCACAGAGGCGT...................... 23 2 20 0.05 1 0 0 1 0 0 0
................................................................................................................................................................................................................TGTTCAGTCGCAGAGAGGTGC...................... 21 1 20 0.05 1 0 0 1 0 0 0
...............................................................................................................................................................................................................................AGGCGCATCATCAAGAGGGTTC...... 22 1 20 0.05 1 0 0 1 0 0 0
.........................................................................................................................................................................................................TTTTGGTTGTTCAGTAGCAGA............................. 21 1 20 0.05 1 0 0 1 0 0 0
................................................................................................................................................................................TTACGCTCGTAATCTCATTT....................................................... 20 1 20 0.05 1 1 0 0 0 0 0
.................................................................................................................................................................................................................GTTCAGTCGCAGAGAGGCG....................... 19 0 20 0.05 1 1 0 0 0 0 0
...........................................................................................................................................................................................ATCTCATTTAACTTTTTTGGT........................................... 21 0 20 0.05 1 1 0 0 0 0 0
........................................................................................TCATACAACGCAAATGGACGCAAAAATT....................................................................................................................................... 28 1 20 0.05 1 0 0 0 1 0 0
.................................................................................................................................................................TTCTTACGGTCATTTTTACGC..................................................................... 21 1 20 0.05 1 1 0 0 0 0 0
......................................................................................................................TGGCGACAGGCCCCCGGAGGCCCCAGAG......................................................................................................... 28 1 20 0.05 1 0 0 0 1 0 0
..............................................................................................................................................................................................................GTTGTTCAATCGCAGAGAGGC........................ 21 1 20 0.05 1 1 0 0 0 0 0
..........................................................................................................................................................................................................................CAGAGAGGAGCATCATCAAGAA........... 22 1 20 0.05 1 1 0 0 0 0 0
............................................................................................................................................................................................................................GAGAGGCGCAACATCAAGAAG.......... 21 1 20 0.05 1 0 0 1 0 0 0
....................................................................................................................TCCTGCGACAGGCCCCCGGAGGC................................................................................................................ 23 1 20 0.05 1 0 0 0 1 0 0
.................................................................................................................................................................................................................GTTCAGTCGCAGAGAGTCGCA..................... 21 1 20 0.05 1 0 1 0 0 0 0
..............................................................................................................................................................................................................GTTGTTCAGTCGCAGAGAGGAGT...................... 23 2 20 0.05 1 0 0 1 0 0 0
......................................................................................................................................................................................................................GTCGCAGAGAGGCGCATCATCAAGAAGGT........ 29 0 20 0.05 1 0 0 0 1 0 0
..............................................................................................................................................................................................................GTTGCTCAGTCGCAGAGAGG......................... 20 1 20 0.05 1 0 0 1 0 0 0
........................................................................................................................................................................................ATAATCTCGTTTAACTTTTTTG............................................. 22 1 20 0.05 1 1 0 0 0 0 0
.....................................................................................................................................................................TACGCTCATTTTTACGCTCATAATCTC........................................................... 27 0 20 0.05 1 1 0 0 0 0 0
...............................................................................................................AAATTTCTTGCGACAGGCCCC....................................................................................................................... 21 0 20 0.05 1 0 0 0 0 1 0
...............................................................................................................................................................................................................TTGTTCAGTCACAGAGAGG......................... 19 1 20 0.05 1 0 0 1 0 0 0
...............................................................................................................................................................................................................TTGTTCAGTCGCAGAGAGTT........................ 20 2 20 0.05 1 0 0 1 0 0 0
......................................................................................................................................................................................................CTTTTTTGGTTGTTCGGTCGCA............................... 22 1 20 0.05 1 0 0 1 0 0 0
....................................................................................................................................................................................................................................CATCATCAAGAGGGTTCTTCT.. 21 1 20 0.05 1 1 0 0 0 0 0
...................................................................................................................TGCTTGCGACAGGCCCCCGGA................................................................................................................... 21 1 20 0.05 1 0 0 0 1 0 0
.................................................................................................................................................................................TACGCTCATAATCTCATTT....................................................... 19 0 20 0.05 1 1 0 0 0 0 0
..................................................................................................................................CCCGGAGGCCCCAGAGAGAATCTTAC............................................................................................... 26 0 20 0.05 1 0 0 0 1 0 0
.............................................................................................................................................................CTCATTCTTACGCTCATTTT.......................................................................... 20 0 20 0.05 1 1 0 0 0 0 0
.................................................................................................................................CCCCGGAGGCCCCAGAGAGAAT.................................................................................................... 22 0 20 0.05 1 0 1 0 0 0 0
...........................................................................................TACAACGAAAATGGACGCAA............................................................................................................................................ 20 0 20 0.05 1 0 0 0 0 1 0
..............................................................................................................................................................................................................GTTGTTCGGTCGCAGAGAGGC........................ 21 1 20 0.05 1 0 0 1 0 0 0
.................................................................................................................................................................................................................GTTCAGCCGCAGAGAGGCGCA..................... 21 1 20 0.05 1 0 0 1 0 0 0
................................................................................................................................................................................................................TGCTCAGTCGCAGAGAGGCGC...................... 21 1 20 0.05 1 0 1 0 0 0 0
.........................................................................TATAGACTTCTCATTTCATACA............................................................................................................................................................ 22 0 20 0.05 1 1 0 0 0 0 0

Anti-sense strand reads

CGATGTACTTAATAGTTCCGACAGCCGCATTTAAGCTACATTTGCGGAAGCATTATGGTGATTGGTATGTTGTATATCTGAAGAGTAAAGTATGTTGCTTTTACCTGCGTTTTTAAAGAACGCTGTCCGGGGGCCTCCGGGGTCTCTCTTAGAATGAGAGTAAGAATGCGAGTAAAAATGCGAGTATTAGAGTAAATTGAAAAAACCAACAAGTCAGCGTCTCTCCGCGTAGTAGTTCTTCCAAGAAGACG
*********************************************************************************************************************..............((..(((((.......))))).))........**************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M044
female body
 V106
head
 V105
male body		 V055
head
 M058
embryo
 V039
embryo
........................................................................................................................................CCGGGGTCTCTCTTAGAATGA.............................................................................................. 21 0 20 17.45 349 349 0 0 0 0 0
...........................................................................................................................................................GAGAGTAAGAATGCGAGTAAA........................................................................... 21 0 20 3.10 62 0 62 0 0 0 0
...................................................................................................................................GGCCTCCGGGGTCTCTCTT..................................................................................................... 19 0 20 3.05 61 61 0 0 0 0 0
....................................................................................................................AGAACGCTGTCCGGGGGCCTC.................................................................................................................. 21 0 20 2.70 54 0 54 0 0 0 0
.....................................................................................................................................................................................................TGAAAAAACCAACAAGTCAGC................................. 21 0 20 2.65 53 0 53 0 0 0 0
....................................................................................................................................GCCTCCGGGGTCTCTCTTAG................................................................................................... 20 0 20 2.55 51 51 0 0 0 0 0
....................................................................................................................................................................................CGAGTATTAGAGTAAATTGAA.................................................. 21 0 20 2.45 49 28 0 0 21 0 0
.......................................................................................................................................................................................................................TGCGTCTCTCCGCGTAGTAGTT.............. 22 1 20 1.85 37 0 37 0 0 0 0
.........................................................................................................................................................................................................................CGTCTCTCCGCGTAGTAGTTC............. 21 0 20 1.60 32 0 0 32 0 0 0
..................................................................ATGTTGTATATCTGAAGAGTAA................................................................................................................................................................... 22 0 20 1.40 28 0 2 26 0 0 0
.........................................................................................................................................................................................................................CGTCTCTCCGCGTAGTAGTT.............. 20 0 20 1.15 23 0 23 0 0 0 0
..................................................................................................................................................................................................................AAGTCAGCGTCTCTCCGCGTA.................... 21 0 20 1.15 23 23 0 0 0 0 0
.........................................................................................................................................................................................................................CGTCTCTCCGCGGAGTAGTTC............. 21 1 20 1.10 22 22 0 0 0 0 0
...........................................GCGGAAGCATTATGGTGATTGGTAT....................................................................................................................................................................................... 25 0 1 1.00 1 0 0 0 0 1 0
............................................................................................................................................................AGAGTAAGAATGCGAGTAAAA.......................................................................... 21 0 20 0.90 18 6 11 0 1 0 0
............................................................................................................................................................................................................................CTCTCCGCGTAGTAGTTCTT........... 20 0 20 0.80 16 16 0 0 0 0 0
........................................................................................AGTATGTTGCTTTTACCTGC............................................................................................................................................... 20 0 20 0.70 14 14 0 0 0 0 0
...............................................................................................................................................................................................................................TCCGCGTAGTAGTTCTTCCAA....... 21 0 20 0.70 14 0 14 0 0 0 0
.....................................................................................................................................................................................................................TCAGCGTCTCTCCGCGTAGTA................. 21 0 20 0.60 12 0 12 0 0 0 0
................................................................................................................................TTGGGCCTCCGGGGTCTCTCTTA.................................................................................................... 23 2 20 0.60 12 10 2 0 0 0 0
........................................................................................................................................................................................................................GCGTCTCTCCGCGTAGTAGTT.............. 21 0 20 0.55 11 0 0 0 11 0 0
..............................................................................................................................................................................AAAATGCGAGTATTAGAGTA......................................................... 20 0 20 0.50 10 0 0 10 0 0 0
.................................................................TATGTTGTATATCTGAAGAGT..................................................................................................................................................................... 21 0 20 0.45 9 9 0 0 0 0 0
..................................................................................................................................................................................TGCGAGTATTAGAGTAAATT..................................................... 20 0 20 0.45 9 9 0 0 0 0 0
.....................................................................................................................................................TAGAATGAGAGTAAGAATGCGAGTAA............................................................................ 26 0 20 0.45 9 0 0 0 0 8 1
.........................................................................................................................................................................................................................CGTCTCTCCGCGAAGTAGTTC............. 21 1 20 0.40 8 8 0 0 0 0 0
...................................................................................................TTTACCTGCGTTTTTAAAGA.................................................................................................................................... 20 0 20 0.40 8 3 5 0 0 0 0
....................................................................................................................................................................................................................GTCAGCGTCTCTCCGCGTA.................... 19 0 20 0.40 8 8 0 0 0 0 0
.......................................................................................................................................................GAATGAGAGTAAGAATGCGAG............................................................................... 21 0 20 0.35 7 7 0 0 0 0 0
..............................................................................................................................................................................AAAATGCGAGTATTAGAGT.......................................................... 19 0 20 0.35 7 7 0 0 0 0 0
........................................................................................................................................................................................................................GCGTCTCTCCGCGTAGTATTT.............. 21 1 20 0.35 7 0 7 0 0 0 0
.......................................................................................................................................................................................................................TTCGTCTCTCCGCGTAGTAGT............... 21 2 20 0.35 7 7 0 0 0 0 0
.........................................................................................................................................CGGGGTCTCTCTTAGAATG............................................................................................... 19 0 20 0.35 7 7 0 0 0 0 0
......................................................................................................................................................................TGCGAGTAAAAATGCGAGTAT................................................................ 21 0 20 0.35 7 0 4 3 0 0 0
...............................................................................................................................................................GTAAGAATGCGAGTAAAAATG....................................................................... 21 0 20 0.30 6 6 0 0 0 0 0
..............................................................................................................................................................AGTAAGAATGCGAGTAAAAAT........................................................................ 21 0 20 0.30 6 6 0 0 0 0 0
......................................................................................................................................................................................................................CAGCGTCTCTCCGCGTAGTAGT............... 22 0 20 0.30 6 6 0 0 0 0 0
............................................................................................................................GTCCGGGGGCCTCCGGGGTCTCTCT...................................................................................................... 25 0 20 0.25 5 5 0 0 0 0 0
..................................................................................................................................GGGCCTCCGGGGACTCTCTTA.................................................................................................... 21 1 20 0.25 5 5 0 0 0 0 0
..........................................................................................................................................................TGAGAGTAAGAATGCGAGTAG............................................................................ 21 1 20 0.25 5 0 0 5 0 0 0
.........................CGCATCTAAGCTTAATTTG............................................................................................................................................................................................................... 19 3 20 0.20 4 0 0 4 0 0 0
..........................................................................................................................................................TGAGAGTAAGAATGCGAGTA............................................................................. 20 0 20 0.20 4 0 0 0 4 0 0
.................................................................................................................................................................................ATGCGAGTATTAGAGTAAATT..................................................... 21 0 20 0.20 4 0 0 0 4 0 0
.........................................................................ATATCTGAAGAGTAAAGTATGTTGCTT....................................................................................................................................................... 27 0 20 0.20 4 0 0 0 0 4 0
...........................................................................................ATGTTGCTTTTACCTGCGTT............................................................................................................................................ 20 0 20 0.20 4 0 0 4 0 0 0
........................................................................................................................................................................................................................GCGTCTCTCCGCTTAGTAGTT.............. 21 1 20 0.20 4 0 4 0 0 0 0
.........................................................................ATATCTGAAGAGTAAAGTATGTTGC......................................................................................................................................................... 25 0 20 0.20 4 0 0 0 0 4 0
.............................................................................................................................................................................AAAAATGCGAGTATTAGAGT.......................................................... 20 0 20 0.20 4 3 0 0 1 0 0
.............................................................................................................................................................GAGTAAGAATGCGAGTAAAAA......................................................................... 21 0 20 0.15 3 0 0 0 3 0 0
......................................................................................................................................................................................AGTATTAGAGTAAATTGAA.................................................. 19 0 20 0.15 3 0 0 0 3 0 0
....................................................................................................................................................................................................................GTCAGCGTCTCTCCGCGTAGT.................. 21 0 20 0.15 3 0 3 0 0 0 0
..............................................................................................................................................................................AAAATGCGAGTATTAGAGTAA........................................................ 21 0 20 0.15 3 0 0 3 0 0 0
...................................................................................................................AAGAACGCTGTCCGGGGG...................................................................................................................... 18 0 20 0.15 3 3 0 0 0 0 0
....................................................................................................................................................................................................................GTCAGCGTCTCTCCGCGTAGTAG................ 23 0 20 0.15 3 1 2 0 0 0 0
....................................................................................................................................................................................................................................GTAGTAGTTCTTCCAAGAAGA.. 21 0 20 0.15 3 0 0 0 0 1 2
..........................................................................................................................................................................................................................GTCTCTCCGCGTAGTAGTTCG............ 21 1 20 0.15 3 3 0 0 0 0 0
.................................................................................................................................................................................................................................CGCGTAGTAGTTGTTCCAAGA..... 21 1 20 0.15 3 3 0 0 0 0 0
...........................................................................................................................................................................GTAAAAATGCGAGTATTAGA............................................................ 20 0 20 0.15 3 0 1 2 0 0 0
.........................................................................................................................................................................................................................CGTCTCTCCGCGTAGTAGTTCT............ 22 0 20 0.15 3 0 0 0 0 3 0
..........................................................................................................................................................TGAGAGTAAGAATGCGAGGAA............................................................................ 21 1 20 0.15 3 0 3 0 0 0 0
......................................................................................................................................................................................................................CAGCGTCTCTCCGCGTAGTAGTTC............. 24 0 20 0.15 3 0 3 0 0 0 0
....................................................................................................................................GCCTCCGGGGTCCCTCTTAGA.................................................................................................. 21 1 20 0.15 3 3 0 0 0 0 0
....................................................................................................................................................................................GGAGTATTAGAGTAAATTGAA.................................................. 21 1 20 0.15 3 0 0 3 0 0 0
.........................................................................................................................................................................GAGTAAAAATGCGAGTATTA.............................................................. 20 0 20 0.15 3 0 0 3 0 0 0
................................................AGCATTATGGTGACGGGT......................................................................................................................................................................................... 18 2 8 0.13 1 0 0 0 0 0 1
........................................................................................................................................................................................................................GCGTCTCTCCGCGTATTAGT............... 20 1 20 0.10 2 0 2 0 0 0 0
.........................................................................................................................................CGGGGTCTCTCTTAGAATGAGAGTAAG....................................................................................... 27 0 20 0.10 2 0 0 0 0 2 0
................................................................................................................................GGGGGCCTCCGGGGTCTCTC....................................................................................................... 20 0 20 0.10 2 0 2 0 0 0 0
....................................................................................................................................................................................CTAGTATTAGAGTAAATTGAA.................................................. 21 1 20 0.10 2 0 0 2 0 0 0
.............................................................................................................................................................................GAAAATGCGAGTATTAGAGT.......................................................... 20 1 20 0.10 2 2 0 0 0 0 0
........................................................................................................................................................................................................................GCGTCTCTCCGCGCAGTAGTT.............. 21 1 20 0.10 2 0 2 0 0 0 0
........................................................................................................................................CCGGGGTCTCTCTTAGGATGA.............................................................................................. 21 1 20 0.10 2 2 0 0 0 0 0
....................................................................................................................................................................................CGAGTATTCGAGTAAATTGAA.................................................. 21 1 20 0.10 2 0 0 2 0 0 0
....................................................................................................................................................................................CGATTATTAGAGTAAATTGAA.................................................. 21 1 20 0.10 2 0 2 0 0 0 0
....................................................................................................................................................................................................................GTCAGCGTCTCTCCGCGTAGTAGTTCTT........... 28 0 20 0.10 2 0 0 0 0 0 2
.........................................................................................................................................................................................................................CGTCTCTCGGCGGAGTAGTTC............. 21 2 20 0.10 2 2 0 0 0 0 0
.........................................................................................................TGCGTTTTTAAAGAACGCTGT............................................................................................................................. 21 0 20 0.10 2 0 2 0 0 0 0
..........................................................................................................................................................................................................................GTCTCTCCGCGTAGTAGTTCC............ 21 1 20 0.10 2 0 0 2 0 0 0
......................................................................................................................................CTCCGGGGTCTCTCTTAGAAT................................................................................................ 21 0 20 0.10 2 0 0 2 0 0 0
.............................................................................CTGAAGAGTAAAGTATGTTG.......................................................................................................................................................... 20 0 20 0.10 2 0 2 0 0 0 0
............................................................................................................................................................................TAAAAATGCGAGTATTAGAGT.......................................................... 21 0 20 0.10 2 0 0 0 2 0 0
........................................................................................................................................................................................................................GCGTCTCTCCACGTAGTAGTT.............. 21 1 20 0.10 2 0 2 0 0 0 0
......................................................................................................................................................................................................................CAGCGTCTCTCCGCGTAGTAG................ 21 0 20 0.10 2 0 0 0 0 2 0
....................................................................................................................................................................................CGAGTATCAGAGTAAATTGAA.................................................. 21 1 20 0.10 2 0 2 0 0 0 0
................................................................................................................................................TCTCTTAGAATGAGAGTAAGA...................................................................................... 21 0 20 0.10 2 0 2 0 0 0 0
..........................................................TGATTGGTATGTTGTATATCTG........................................................................................................................................................................... 22 0 20 0.10 2 2 0 0 0 0 0
.....................................................................................................................................................TAGAATGAGAGTAAGAATGCGAGCAA............................................................................ 26 1 20 0.10 2 0 0 0 0 2 0
............................................................................................TGTTGCTTTTACCTGCGTTTT.......................................................................................................................................... 21 0 20 0.10 2 0 2 0 0 0 0
..................................................................................................................................GGGCCTCCGGGGTCTCTCTTAGAATG............................................................................................... 26 0 20 0.10 2 2 0 0 0 0 0
....................................................................................................................................................................................CGAGTGTTAGGGTAAATTGAA.................................................. 21 2 20 0.10 2 0 0 2 0 0 0
......................................................................................................................................................................................AGTATTAGAGTAAATTGAAAA................................................ 21 0 20 0.10 2 0 0 0 2 0 0
........................................................................................................................................................GGTGAGAGTAAGAATGCGAGT.............................................................................. 21 2 20 0.10 2 1 1 0 0 0 0
.................................................................................................................................................................................ATGCGAGTATTAGAGTAAA....................................................... 19 0 20 0.10 2 0 2 0 0 0 0
.......................................................................................................................................................................................GTATTAGAGTAAATTGAAAA................................................ 20 0 20 0.10 2 0 2 0 0 0 0
......................................................................TGTATATCTGAAGAGTAAAGTA............................................................................................................................................................... 22 0 20 0.10 2 2 0 0 0 0 0
.........................................................................................................................................CGGGGTCTCTCTTAGAATGA.............................................................................................. 20 0 20 0.10 2 0 2 0 0 0 0
........................................................................................................................................................................................................................GCGTCTCTCCGCATAGTAGTT.............. 21 1 20 0.10 2 2 0 0 0 0 0
..................................................................................................................AAAGAACGCTGTCCGGGGGC..................................................................................................................... 20 0 20 0.10 2 0 2 0 0 0 0
.....................................................................................................................................................................................................TCAAAAAACCAACAAGTCAGC................................. 21 1 20 0.05 1 0 1 0 0 0 0
......................................................................................................................................................................................................................CAGCGTCTCTCCGCGTAGGAG................ 21 1 20 0.05 1 0 1 0 0 0 0
........................................................................................................................................................................................................................TCGTCTCTCCGCGTGGTAGT............... 20 2 20 0.05 1 0 1 0 0 0 0
................................................................................................................TTAAAGAACGCTGTCCGGGGGC..................................................................................................................... 22 0 20 0.05 1 0 1 0 0 0 0
...........................................................................ATCTGAAGAGTAAAGTATGTTG.......................................................................................................................................................... 22 0 20 0.05 1 0 0 0 1 0 0
.........................................................................................................................................................................................................................CGTCTCTCCCCGTAGTAGTTC............. 21 1 20 0.05 1 0 1 0 0 0 0
..........................................................................................................................................................TGAGGGTAAGAATGCGAGTAA............................................................................ 21 1 20 0.05 1 1 0 0 0 0 0
............................................................................................................................................................................................................ACCAACAAGTCAGCGTCTCCC.......................... 21 1 20 0.05 1 1 0 0 0 0 0
................................................................................................................................................................................................................................CCGCGTAGTAGTTCTTCCAAGAAGACG 27 0 20 0.05 1 0 0 0 0 1 0
.......................................................................................................................................................................................................................CGCGTCTCTCCACGTAGTAGTT.............. 22 2 20 0.05 1 0 0 0 1 0 0
......................................................................................................................AACGCTGTCCGGGGGCCTCCG................................................................................................................ 21 0 20 0.05 1 0 0 0 1 0 0
........................................................................................................................................................................................TATTAGAGTAAATTGAAAAAACCAAC......................................... 26 0 20 0.05 1 1 0 0 0 0 0
......................................................ATGGTGATTGGTATGTTGTAT................................................................................................................................................................................ 21 0 20 0.05 1 0 1 0 0 0 0
....................................................................................................................................................................................................................GTCAGCTTCTCTCCGCGTAGTAGTTCTT........... 28 1 20 0.05 1 0 0 0 0 0 1
...............................................................................................................................................................................AAATGAGAGTATTAGAGTAAA....................................................... 21 1 20 0.05 1 0 0 1 0 0 0
.........................................................................................GTATGTTGCTTTCACCTGCGT............................................................................................................................................. 21 1 20 0.05 1 1 0 0 0 0 0
..............................................................................TGAAGAGTAAAGTATGTTGC......................................................................................................................................................... 20 0 20 0.05 1 0 0 1 0 0 0
.............................................................................................................................................................GAGTAAGAGTGCGAGTAAAAA......................................................................... 21 1 20 0.05 1 0 0 1 0 0 0
.........................................................................................GTATGTTGCTTTTACCTGCGTT............................................................................................................................................ 22 0 20 0.05 1 1 0 0 0 0 0
.........................................................................................................................................................................................................................CGTCTATCCGAGTAGTAGTT.............. 20 2 20 0.05 1 0 1 0 0 0 0
...............................................................................................................................CGGGGGCCTCCGGGGTCTCT........................................................................................................ 20 0 20 0.05 1 0 0 0 0 1 0
..........................................................................................TATGTTGCTTTGACCTGCGT............................................................................................................................................. 20 1 20 0.05 1 1 0 0 0 0 0
.....................................................................................................................................................................ATGCGAGTAAAAATGCGAGTA................................................................. 21 0 20 0.05 1 0 0 0 1 0 0
.........................................................................................................................................................ATGAGAGTAAGATTGCGAGTA............................................................................. 21 1 20 0.05 1 0 0 0 1 0 0
...................................................................................................................................GGCCTCCGGGGTCGCTCTTAGA.................................................................................................. 22 1 20 0.05 1 1 0 0 0 0 0
....................................................................................................................................................................................CGAGTATCAGAGTAAATTGCA.................................................. 21 2 20 0.05 1 0 0 1 0 0 0
..........................................................................................................................................................................................................................GTCTATCAGCGTAGTAGTTCT............ 21 2 20 0.05 1 0 0 1 0 0 0
........................................................................................................................................................................................................................TCGTCTCTCCTCGTAGTAGTT.............. 21 2 20 0.05 1 0 1 0 0 0 0
..........................................................................................................................................................TGACAGTAAGAATGCGAGTAA............................................................................ 21 1 20 0.05 1 0 0 1 0 0 0
....................................................................................................................................................................................CGAGTGTTAGAGTAAATTGAA.................................................. 21 1 20 0.05 1 0 1 0 0 0 0
............................................................................................................................................................................................................................CTCTCCGCGTAATAGTTCTT........... 20 1 20 0.05 1 1 0 0 0 0 0
........................................................................................................................................................................CGAGTAAAAATGCGAGTATT............................................................... 20 0 20 0.05 1 1 0 0 0 0 0
..........................................................................................................................................................TGAGAGTAAGGATGCGAGTAA............................................................................ 21 1 20 0.05 1 0 0 0 1 0 0
........................................................................................................................................................................................................................GCTTCTCTCCGCGGAGTAGGT.............. 21 3 20 0.05 1 0 0 0 1 0 0
..............................................................................................................................................................................AAAATGCAAGTATTAGAGT.......................................................... 19 1 20 0.05 1 0 0 1 0 0 0
.......................................................................................AAGTATGTTGCTTTTACCTG................................................................................................................................................ 20 0 20 0.05 1 1 0 0 0 0 0
................................................................................................................................................................................................................ACAAGTCAGCGTCTCTCCGGGTAGTAGT............... 28 1 20 0.05 1 1 0 0 0 0 0
................................................................................................................................................................................AATGCGAGCATTAGAGTAAAT...................................................... 21 1 20 0.05 1 0 0 1 0 0 0
...........................................................................ATCTGAAGAGAAAAGTATGTT........................................................................................................................................................... 21 1 20 0.05 1 0 0 1 0 0 0
..........................................................................................................................................................TGAGAACAAGAATGCGAGTAA............................................................................ 21 2 20 0.05 1 0 0 0 1 0 0
.................................................................................................................................................................................................................CAAGTCAGCGTCTCTCCGCGA..................... 21 1 20 0.05 1 1 0 0 0 0 0
......................................................................................................................................................................................................................CGGCGTCTCTCCGCGTAGTAG................ 21 1 20 0.05 1 0 1 0 0 0 0
........................................................................................................................................................................................................................GCGTCTCTCCTCGTAGTAG................ 19 1 20 0.05 1 0 1 0 0 0 0
.......................................................................................................................................................................................................................TGCGTCTCTCCGCGTAGTAGTTC............. 23 1 20 0.05 1 0 0 0 1 0 0
........................................................................................................................................................................................................................GTGTCTCTCCGCGTAGTAGTT.............. 21 1 20 0.05 1 0 1 0 0 0 0
........................................................................................................................................................................................................................GCGTCTCTCCGCGGAGTAGT............... 20 1 20 0.05 1 0 1 0 0 0 0
....................................................................................................................................................................................................................GTCAGCGTCTCTCCGCGTAGTA................. 22 0 20 0.05 1 0 1 0 0 0 0
.........................................................................................................................................................................................................................CGTCTCTCCGCGTAGTAATTCT............ 22 1 20 0.05 1 0 1 0 0 0 0
....................................................................................................................................................................................................................GTCAGCGTCTCTCCGAGTAGTAGT............... 24 1 20 0.05 1 1 0 0 0 0 0
.................................................................................................................................................CTCTTAGGGTGAGAGTAAG....................................................................................... 19 2 20 0.05 1 0 0 0 1 0 0
..........................................................................................................................................................................................................................GTCCCTCCGCGTAGTAGTTCT............ 21 1 20 0.05 1 0 0 0 1 0 0
..................................................................................GAGTAAAGTATGTTGCTTTT..................................................................................................................................................... 20 0 20 0.05 1 0 0 1 0 0 0
..............................................................................................................................................................................................................CAACAAGTCAGCGTCTCTCC......................... 20 0 20 0.05 1 1 0 0 0 0 0
................................................................................................................................................................................................................ACAAGTCAGCGTCTCTCCGCGTA.................... 23 0 20 0.05 1 1 0 0 0 0 0
....................................................................................................TTACCTGCGTTTTTAAAGAA................................................................................................................................... 20 0 20 0.05 1 1 0 0 0 0 0
...........................................................................................................................................................................................................................TCTCTCCGCGTAGTAGTTCTT........... 21 0 20 0.05 1 0 0 1 0 0 0
.......................................................................................................................................................................GCGAGTAAAAATGCGAGTAAT............................................................... 21 1 20 0.05 1 0 0 1 0 0 0
.......................................................................................................................................................................................................................TGCGTCTCTCCCCGGAGTAGT............... 21 3 20 0.05 1 0 0 0 1 0 0
.......................................................................................................................................TCCGGGGTCTCTCTTAGAATGAG............................................................................................. 23 0 20 0.05 1 0 0 0 0 1 0
.........................................................................................................................................................................................................................CGTCTCTCCGCGTAGTAGG............... 19 1 20 0.05 1 1 0 0 0 0 0
...........................................................................................................................................................................GTAAAAATGCGAGTATTAGAGT.......................................................... 22 0 20 0.05 1 0 0 0 1 0 0
...............................................................................................................................................................................................................................TCCGCGTAGTAGTTCTTCCAAG...... 22 0 20 0.05 1 0 0 0 0 1 0
.........................................................................................................................................................................................................................CGTCTCTCCGCGTAGTAGTTCTTC.......... 24 0 20 0.05 1 0 0 0 0 1 0
............................................................................................................................TTCCGGGGGCCTCCGGGGTCTC......................................................................................................... 22 1 20 0.05 1 1 0 0 0 0 0
.......................................................................................................................................................................GCGAGTAAAAATGCGAGTGTT............................................................... 21 1 20 0.05 1 0 1 0 0 0 0
....................................................................................................................................................TTAGAATGAGACTAAGAATGC.................................................................................. 21 1 20 0.05 1 0 0 1 0 0 0
.........................................................................................................................................................................................................................CGTCTCTCCGCGTAGTAGTCC............. 21 1 20 0.05 1 0 0 0 1 0 0
........................................................................................................................................................................................................................GCGTCTCTCCGTGTAGTAGTT.............. 21 1 20 0.05 1 0 1 0 0 0 0
....................................................................................................................................................................................CGAGTATTATAGTAAATTGAA.................................................. 21 1 20 0.05 1 0 1 0 0 0 0
............................................................................................................................................................................................................ACCAACAAGTCCGCGTCTCT........................... 20 1 20 0.05 1 1 0 0 0 0 0
..........................................................TGATTGGTATGTTGTATATC............................................................................................................................................................................. 20 0 20 0.05 1 0 0 0 1 0 0
....................................................................................................................................................................................................................GTCAGCGTCTCTCCGCGGAG................... 20 1 20 0.05 1 0 1 0 0 0 0
.....................................................................................................................................................................................................................TTTGCGTCTCTCCGCGTAGTAGTT.............. 24 2 20 0.05 1 0 0 1 0 0 0
....................................................................................................................................................TTAGAATGAGAGTAAGAATGCGAGT.............................................................................. 25 0 20 0.05 1 0 0 0 0 0 1
.....................................................................................................................................................................................................................................TAGTAGTTCTTCCAAGAAGAC. 21 0 20 0.05 1 1 0 0 0 0 0
...........................................................................................ATGTTGCTTTTACCTGCGTTC........................................................................................................................................... 21 1 20 0.05 1 0 0 0 1 0 0
..................................................................................................................................................................................TGCGAATATTAGAGTAAATTG.................................................... 21 1 20 0.05 1 0 0 1 0 0 0
............................................................................................................................................................................................................................CTCTCCGCGTAGAACTTCTT........... 20 2 20 0.05 1 0 0 0 1 0 0
........................................................................................................................................................................................................................GCGTCTCCCCGCGTAGTAGTT.............. 21 1 20 0.05 1 0 1 0 0 0 0
....................................................................................................................................................TTAGAATGAGAGTAAGAATGCGAGTAA............................................................................ 27 0 20 0.05 1 0 0 0 0 0 1
.........................................................................................................................GCTGTCCGGGGGCCTCCGGGGTCTCT........................................................................................................ 26 0 20 0.05 1 1 0 0 0 0 0
..................................................................................................................................................................................................................................GCGTAGTAGTTCTTCCAAG...... 19 0 20 0.05 1 1 0 0 0 0 0
............................................................................................TTTTGCTTTTACCTGCGTTTT.......................................................................................................................................... 21 1 20 0.05 1 0 0 0 1 0 0
.......................................................................................................................................................................................................................AGCGTCTCTCCGCGTAGTAGTC.............. 22 1 20 0.05 1 1 0 0 0 0 0
........................................................................................................................................................................................................................ATGTCTCTCCGCGTAGTAGTTCT............ 23 2 20 0.05 1 1 0 0 0 0 0
.........................................................................................GTATGTTGCGTTTACCTGCGT............................................................................................................................................. 21 1 20 0.05 1 0 0 1 0 0 0
................................................................................................................................................................................................................................CCGCGTAGTAGTTCTTCCAAGAAGAAG 27 1 20 0.05 1 0 1 0 0 0 0
...........................................................................................................................................................................................................................TCTCTCCGCGTATTAGTTCTT........... 21 1 20 0.05 1 1 0 0 0 0 0
..................................................................................................................................................................................TGCGAGTATTAGGGTAAATTGAGGA................................................ 25 3 20 0.05 1 0 0 1 0 0 0
...........................................................................ATCTGAAGAGTATAGTATGTT........................................................................................................................................................... 21 1 20 0.05 1 1 0 0 0 0 0
..........................................................................................................................................................................................................................GTCTCTCCGCGTAGTAGTTCA............ 21 1 20 0.05 1 0 0 0 1 0 0
..........................................................................................................................................................CGAGAGTAAGAATGCGAGTAA............................................................................ 21 1 20 0.05 1 0 1 0 0 0 0
.............................................................................................................................................................GAGTAAGAATGAGAGTAAAA.......................................................................... 20 1 20 0.05 1 1 0 0 0 0 0
........................................................................................................................................................................CGAGTAGAAATGCGAGTATTA.............................................................. 21 1 20 0.05 1 0 0 1 0 0 0
....................................................................................................................................................................................CGAGTATTACAGTAAATTGCA.................................................. 21 2 20 0.05 1 0 0 0 1 0 0
..................................................................................................................................................................................TGCGAGTATAAGAGTAAATTG.................................................... 21 1 20 0.05 1 0 0 1 0 0 0
................................................................................................................................................................................AATGCGAGTATTAGAGTAAATT..................................................... 22 0 20 0.05 1 0 0 1 0 0 0
..............................................................................................................................................................AGTAAGAATGCGAGTAAAAATGCGAGT.................................................................. 27 0 20 0.05 1 0 0 1 0 0 0
..........................................................................................................................................................TGAGAGTAAGAATGCGGGTAA............................................................................ 21 1 20 0.05 1 0 1 0 0 0 0
.....................................................................................................................................................................................GACTATTAGAGTAAATTGAA.................................................. 20 1 20 0.05 1 0 0 1 0 0 0
..........................................................................................................................................................................................................................GTCTCTCCGCTTAGTAGTTCG............ 21 2 20 0.05 1 0 0 1 0 0 0
.....................................................................................................................................................................................................................ACAGCGTCTCTCCGCGTAGTAGTTCTT........... 27 1 20 0.05 1 1 0 0 0 0 0
.......................................................................................................................................................................................................................AGCGTCTCTCCACGTAGTAG................ 20 1 20 0.05 1 1 0 0 0 0 0
....................................................................................................................................................................................CGAGTATTAGAGTAAATTGAAAA................................................ 23 0 20 0.05 1 0 0 0 0 1 0
..........................................................................................................GCGTTTTTAAAGAACGCTGTC............................................................................................................................ 21 0 20 0.05 1 0 1 0 0 0 0
.....................................................................................................................................................................ATGCGAGTAAAAATGCGAGTATT............................................................... 23 0 20 0.05 1 1 0 0 0 0 0
...........................................................................................................................................................................................................AACCGACAAGTCAGCGTCTCTCC......................... 23 1 20 0.05 1 0 1 0 0 0 0
...............................................................................................TGCTTTTACCTGCTTTTTTAA....................................................................................................................................... 21 1 20 0.05 1 0 1 0 0 0 0
..........................................................................TATCTGAAGAGTAAAGTATGTTGC......................................................................................................................................................... 24 0 20 0.05 1 0 0 0 0 1 0
..........................................................................................................................................................................................................................GTCTCTCCACGTAGTAGTTCT............ 21 1 20 0.05 1 0 0 1 0 0 0
............................................................................................................................................................................AAAAAATGCGAGTATTAGAGT.......................................................... 21 1 20 0.05 1 0 0 1 0 0 0
.................................................................................................................................................................................................................CAAGTCAGCTTCTCTCCGCGTAGTAG................ 26 1 20 0.05 1 0 1 0 0 0 0
..................................................................................................................................................................................................................AAGTCAGCGTCTCTCCGCGTAGTAGTT.............. 27 0 20 0.05 1 0 1 0 0 0 0
.........................................................................................................................................................................................................................CGTCTCTCCGCGTAGTAGTTCTTCCA........ 26 0 20 0.05 1 1 0 0 0 0 0
..................................................................................................TTTAACCTGCGTTTTTAAAGA.................................................................................................................................... 21 1 20 0.05 1 0 0 1 0 0 0
..............................................................................................................................CCGGGTGCCTCCGGGGTCTCTCTTAG................................................................................................... 26 1 20 0.05 1 0 1 0 0 0 0
................................................................................................................................................................................................................................CCGCTTAGTAGTTCTCCCAAG...... 21 2 20 0.05 1 0 1 0 0 0 0
..........................................................................................................................................................................................................................GTCTCTCCCCGTAGTAGTTC............. 20 1 20 0.05 1 1 0 0 0 0 0
....................................................................................................................................................................................CGAGTATTAGACTAAATTGAA.................................................. 21 1 20 0.05 1 0 1 0 0 0 0
.......................................................................................AAGTATGTTGCGTTTACCTG................................................................................................................................................ 20 1 20 0.05 1 1 0 0 0 0 0
..................................................................................................................................................................................................................AAGTCAGCGTCTCTCCGCGCA.................... 21 1 20 0.05 1 1 0 0 0 0 0
......................................................................................................ACCTGCATTTTTAAAGAACGCTGTCCG.......................................................................................................................... 27 1 20 0.05 1 0 1 0 0 0 0
..............................................................................................................................................................................................................................CTCCGCCTAGTAGTTCTTCCA........ 21 1 20 0.05 1 0 0 0 1 0 0
..................................................................................................................................................................................TGCGAGTATTAGAGTAGATTG.................................................... 21 1 20 0.05 1 0 0 1 0 0 0
................................................................................................................................................................................................................................CCGCGTAGTAGTTCTTCCGAG...... 21 1 20 0.05 1 0 0 0 1 0 0
..................................................................................................................................................................................TGCGAGTATTAGAGTAAATAG.................................................... 21 1 20 0.05 1 0 0 1 0 0 0
................................................................................................................................................................TAAGAATGCGAGTCAAAATGC...................................................................... 21 1 20 0.05 1 0 0 0 0 1 0
........................................................................................................................................................................................................................GCGTCTATCCGCGTAGTAGT............... 20 1 20 0.05 1 0 1 0 0 0 0
.....................................................................................................TACCTGCGTTTTTGGAGAAC.................................................................................................................................. 20 2 20 0.05 1 1 0 0 0 0 0
...........................................................................................................................................................TCGAGTAAGAATGCGAGTAAAAA......................................................................... 23 2 20 0.05 1 0 0 1 0 0 0
........................................................GTTGATTGGTATGTTGTAT................................................................................................................................................................................ 19 1 20 0.05 1 0 1 0 0 0 0
...............................................................................................................................................................GTAAGAATGCGAGTAAAA.......................................................................... 18 0 20 0.05 1 0 0 0 1 0 0
..........................................................................................................................................................................................................................GTCTCTCCGCGTAGTAGTTG............. 20 1 20 0.05 1 1 0 0 0 0 0
..................................................................................................................................................................................TGCGAGTATTAGCGTAAATTG.................................................... 21 1 20 0.05 1 1 0 0 0 0 0
..................................................................................................................................AGGCCTCCGGGGTCTCTCTT..................................................................................................... 20 1 20 0.05 1 1 0 0 0 0 0
........................................................................................................................................................................CGAGTAAAAATGCGAGTATTAGAGTAAA....................................................... 28 0 20 0.05 1 0 0 0 0 1 0
...........................................................................................................................TTCTCGGGGGCCTCCGGGGTCTCTC....................................................................................................... 25 3 20 0.05 1 1 0 0 0 0 0
....................................................................................................................................GCCTCCGGGGTCTCTCTCAGA.................................................................................................. 21 1 20 0.05 1 1 0 0 0 0 0
.......................................................................................................................................TCCGGGGTCTCTCTTAGGATG............................................................................................... 21 1 20 0.05 1 0 1 0 0 0 0
.......................................................................................................................................................................................................................TGCGTCTCTCCGCGTAGTAGGT.............. 22 2 20 0.05 1 0 1 0 0 0 0
..............................................................................................................................................................................................................CAACAAGTCAGCGTCTCTCCGCGTAGT.................. 27 0 20 0.05 1 1 0 0 0 0 0
................................................................................................................................................................TAAGAATGCGAGTAAAAATGCGAGT.................................................................. 25 0 20 0.05 1 0 0 0 0 1 0
................................................................................AAGAGTAAAGTATGTTGCTTT...................................................................................................................................................... 21 0 20 0.05 1 0 0 0 1 0 0
...................................................................................................................................................................................GCGAGTATTAGAGTAAACTGA................................................... 21 1 20 0.05 1 0 1 0 0 0 0
................................................................................................................................................................................................................................CCGCGTAGTAGTTCCTCCGAGAAGACG 27 2 20 0.05 1 0 1 0 0 0 0
...................................................................................................................................................................................................................AGTCAGCGTCTCTCCGCGTAGTAGTT.............. 26 0 20 0.05 1 0 0 0 0 1 0
........................................................................................................................................................................CGAGTAAAAGTGCGAGTATTA.............................................................. 21 1 20 0.05 1 0 0 1 0 0 0
...................................................................................................................................................................GAATGCGAGTAAAAATGCGAGTAT................................................................ 24 0 20 0.05 1 0 0 0 0 1 0
.............................................................................................................................................................................................................................TCTCCGCGTAGTAGTTCTTCCC........ 22 1 20 0.05 1 1 0 0 0 0 0
................................................................................................CCTTTTACCTGCGTTTTTA........................................................................................................................................ 19 1 20 0.05 1 0 1 0 0 0 0
..........................................................................TATCTGAAGAGTAAAGTATG............................................................................................................................................................. 20 0 20 0.05 1 0 0 1 0 0 0
.........................................................................................................................................................................................................................CGTCTCTCCGCGTAGTAGTTCTTCCAAG...... 28 0 20 0.05 1 0 0 0 0 1 0
..................................................................................................................................GGGCCTCCGGGGTCTCTCTTAGG.................................................................................................. 23 1 20 0.05 1 1 0 0 0 0 0
.................................................................................................................................................................................................................CAAGTCAGCGTCTCTCCGCTT..................... 21 1 20 0.05 1 1 0 0 0 0 0
.........................................................................................................................................................................................................................CGTCTCTCCGCATAGTAGTT.............. 20 1 20 0.05 1 1 0 0 0 0 0
.............................................................................................................................................................GAGTAAGAATGCGAGTAGAAA......................................................................... 21 1 20 0.05 1 0 0 1 0 0 0
...........................................................................................................................................................................GTAAAAATGCGAGTATTAGAGTAAAT...................................................... 26 0 20 0.05 1 0 0 0 0 1 0
......................................................................................................................................................................................................................TTGCGTCCCTCCGCGTAGTAGT............... 22 3 20 0.05 1 0 1 0 0 0 0
...................................................................................................................................................CGTAGAATGAGAGTAAGAATGCGAGT.............................................................................. 26 1 20 0.05 1 0 0 0 0 1 0
......................................................................................................................................................................................................................TAGCGTCTCTCCCCGTAGTAGT............... 22 2 20 0.05 1 0 1 0 0 0 0
....................................................................................................................................................................................................................................GTAGTAGTTCTTCCGAGAAGA.. 21 1 20 0.05 1 0 1 0 0 0 0
............................................................................................................................TTCCGGGGGCCTCCCGGGTCTCT........................................................................................................ 23 2 20 0.05 1 1 0 0 0 0 0
..........................................................................................................................................GGGGTCTCTCTTAGAATGAGAGGTC........................................................................................ 25 3 20 0.05 1 1 0 0 0 0 0
......................................................................................................................................................................................................................ATGCGTCTCTCCGCGTAGTAGT............... 22 2 20 0.05 1 0 0 1 0 0 0
...................................................................................................GTTACCTGCGTTTTTAAAGAA................................................................................................................................... 21 1 20 0.05 1 0 0 1 0 0 0
...........................................................................................................................................................GAGAGTAAGAATGCGAGTGAA........................................................................... 21 1 20 0.05 1 0 1 0 0 0 0
...........................................................................................................................................................GAGAGTACGAATGCGAGTA............................................................................. 19 1 20 0.05 1 0 0 1 0 0 0
..........................................................................................................................................................................................................................GTCTCTCAGCGTAGTAGTTC............. 20 1 20 0.05 1 0 0 0 1 0 0
....................................................................................................................................................................................CGATTATTAGAGTAAATTGA................................................... 20 1 20 0.05 1 0 1 0 0 0 0
..................................................................................................................................AGGCCTCCGGGGTCTCTCTTA.................................................................................................... 21 1 20 0.05 1 1 0 0 0 0 0
....................................................................................................................AGAATGCTGTCCGGGGGCCTC.................................................................................................................. 21 1 20 0.05 1 0 1 0 0 0 0
...................................................................................................................................................................................GCTAGTATTAGAGTAAATTG.................................................... 20 1 20 0.05 1 0 0 1 0 0 0
...........................................................................................................................................................................................................AACCAACAAGTCAGCGTCTCT........................... 21 0 20 0.05 1 0 0 1 0 0 0
.......................................................................................................................................................................................................................AGCGTCTCTCCGAGTAGTAGT............... 21 1 20 0.05 1 0 1 0 0 0 0
....................................................................................................................................................................................................................GTCAGCGTCTATCCGCGTAGT.................. 21 1 20 0.05 1 0 1 0 0 0 0
...........................................................................................................................................................GAGAGTAAGAATGCGCGTAAA........................................................................... 21 1 20 0.05 1 0 0 1 0 0 0
........................................................................................................................................................................................................................GCGTCTCTCCACGTAGTAGT............... 20 1 20 0.05 1 0 1 0 0 0 0
....................................................................................................................................................................................CGAGTATTAGAGTGAATTGAA.................................................. 21 1 20 0.05 1 0 0 1 0 0 0
....................................................................................................................................GCCTCCGGGGTCTCTCCTAGA.................................................................................................. 21 1 20 0.05 1 1 0 0 0 0 0
.......................................................TGGTGATTGGTATGTTGTATA............................................................................................................................................................................... 21 0 20 0.05 1 0 1 0 0 0 0
.....................................................................................................................................................................................................................TCAGCGTCTCTCCGCGTAGCAG................ 22 1 20 0.05 1 0 1 0 0 0 0
..........................................................................................TACGTTGCTTTTACCTGCGTT............................................................................................................................................ 21 1 20 0.05 1 0 0 0 1 0 0
.......................................................................................................................................................................................................................AGCTTCTCTCCGCTTAGTAGT............... 21 2 20 0.05 1 0 1 0 0 0 0
.................................................................................................................................................................................................................................CGCGTAGTAGTTCTTCCAAGAAGACG 26 0 20 0.05 1 0 0 0 0 1 0
.....................................................................................................................................................................................................................TCAGCGTCTCTCCGCGTAGTAGTTCTTC.......... 28 0 20 0.05 1 1 0 0 0 0 0
....................................................................................................................................................................................CGAGTATTAGAGTAAATTG.................................................... 19 0 20 0.05 1 1 0 0 0 0 0
.......................................................................................................................................................................................................................TGCGTCTCTCCGCATAGTAGTT.............. 22 2 20 0.05 1 1 0 0 0 0 0
....................................................................................................................................................................................CGAGTATTAGCGTAAATTGAA.................................................. 21 1 20 0.05 1 0 1 0 0 0 0
.........................................................................................................................................................................................................................CGTCTCTCCGCGTAGTAGTCCT............ 22 1 20 0.05 1 0 0 0 0 1 0
...........................................................................................................CGTTTTTAAAGAACGCTGTC............................................................................................................................ 20 0 20 0.05 1 0 0 0 1 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droAna3 scaffold_13266:16052304-16052554 + dan_2039 GCTACA----TG---AA----TTATCAAGGCTGTCG-----------------------GCGTAAATTCGATGTAAACGCCTTCGTAATACCACTAACCATACAACATATAGACTTCTCATTTCATACAACGAAAATGGACGCAAAAATTTCTT---GCGACAGGCCCCCG-------------GAGGCCCCAGA-G-------------AGAA--TCTTA--CTCTCATTCTTACGCTCAT----------TTTTACGCTCATAATCTCATTTAACTTTTTTGGTTGTTCAGTCGCAGAGAGGCGCATCATCAAGAAGGTTC----TTCTGC
droBip1 scf7180000394541:647-896 - TAAATT----GG---CA----ACAC------TGGCT----GCTTGTGT------GCAGACCC------------------CTACGTAAAACCACTAACCATACAGCATATAGACAACCCATTTCATACAACGAAAATGGACGCGAAAATTTCTT---GCGACAGGCCCCAG-------------CAGGCCCCAGA-G-------------CGGATTTCTTACGCTCT----CTTACGCTCATCGTTCGTTCATCTTACGCTCATTCTCGCATTAAATGTTTTCTGTTTCTCAGTCTCTAAACGGAGCGCGATGAAGAAGGTTG----GCCTGC
droKik1 scf7180000299622:13952-14183 - AGGTTAAATT-TAA-------------------------------------------GCTCA------------------CTTGGTATGTCCACTAACCATACAAAATAAAGAAAAGTCATTTCATACAACGAAAATGGGACCAAAAACTTCTTA--GCGACAGGCCCCAG-AGCTGTTCGCGATAGGCCCCACA-GCTTCGTGTGCGCTCGGGTTTTTCGCTCTCTCATTCTT----------------------ATGCTCGCACACTGATTGCGAGA--------GTTCAGTCGCAGAGTGGCGGATCTTC-AGAAGGTTG----CTCTGC
droFic1 scf7180000453215:498407-498463 - GGTTTA----TG---AA----CTATCAGGGCTGCAA-----------------------GCGAAAGTTCGATGTGAATGCCTTCG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTATGC
droEle1 scf7180000491087:515076-515361 + TACATAAAGT-TAACCAACACTGGCCAG-A----CT----ACATATGT------GGCAAGCGCAACTT---------------GGTACTATCACTAACCATACAACATATAGACTGGTCATTTCATACGACGCATTTGGACACAAAAATTC-GGACCGCGGAAGGTCCACCGCTCTCACAGCAGCAGGTCCAT-GCACTTCGTGTGCGTTCGGGTTTTTTACTCTCTCATTCTTATTCTCAT----------TTTTATGCTCGCGCACTCATTGCACGAGTTCAGTCGTTCAGTCGCAGAGAGGCGCTTTTCGAAGAAGGCTG----TCCTGC
droRho1 scf7180000776535:1455-1749 + ACTACA----CT---AC----TGTACAGATCTGTCATGCTACAAATGAGTACAT-TCATGCAGAAGTCTAGTG----------TGTACTACCAATAACCATACAACATATAGACTGGTTATTTCATACAACGAAAATGGACCCAAAAATTTCTTA--GCGACAGGCCCCAG-AGCTCTTAGCAGCAGGCCCCGGACGCTTCATGTGCGTTCGGGTTTTTTGCGCTCTCATTCTTATTCTCAT----------TTTGATGCTCGCGCGCTCATTGCATGAGTTGAATCGTTCAGTCGCAGAGAGGCGCATTTTGAAGAAGGTTGC---GCCTGC
droBia1 scf7180000301506:604153-604209 - GATATA----TG---AA----CTACCAGGGGTGCAA-----------------------GCGAAAGTTCGATGTTAACGCCTTCG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCATGC
droTak1 scf7180000413646:321-532 + A------------------------------------------------------------------------------------------------------------TAGACTACTCATTTCATGCAACGAAAATGGACACAACAATTTCTTA--GCGACAGGCCCCAGGGGCTCTTAGCAGCAGTTCCCG-ACGCTTCGTGAGCATTCGGGTTTTTTACTCTCTCATTCATATTGTCAT----------TTTTACGCTCGCGCACTCATTGCACGAATTCGGTCGTTCAGTCGCAGAGAGTCGCATTTTAAAGAAGGTTGCCCGCCCTGC
droEug1 scf7180000409672:5740796-5740852 + GGTACA----TG---AA----CTATCAGGGGTGTCG-----------------------GCGAAAGTTTGATGTAAACGCCTTCG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCATGC
dm3 chr2R:3714704-3714760 + GGTACA----TG---AA----CTATCAGGGATGCCG-----------------------TCGCAAATTCGATGTAAATGCCTTTG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCATGC
droSec2 scaffold_1:1364737-1364793 + GGTACA----TG---AA----CTATCAAGGATGCCG-----------------------TCGCAAATTTGATGTAAATGCCTTTG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCATGC
droYak3 2L:16381038-16381094 + GGTACA----TG---AA----CTATCAGGGATGCAA-----------------------ACGCAAATTCGATGTAAATGCCTTTG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCATGC
droEre2 scaffold_4929:18899874-18899930 - GGTACA----TG---AA----CTATCAGGGATGCCG-----------------------CCGCAAATTCGATGTAAATGCCTTTG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCATGC
dp5 3:8704326-8704382 - GCTACA----TG---AA----CTATCAAGGATGCAA-----------------------GCGCAAGTTCGACGTGAACGCCTTCG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCATGC
droPer2 scaffold_12:842182-842268 - CA-------------------------------------------------------------------------------------------CTAACCATACAGTATATGGATGTATCAGTTCATACAGGGAAAACGTACCCACAGAATTTTCT--GCGGCAACTCCCAG-AGG--------------------------------------------------------------------------------------------------------------------------------------------------------GCCTAG
droWil2 scf2_1100000004513:5426302-5426353 + GCTACA----TG---AA----CTATCAGGGTTGCAA-----------------------GAGAAAATTCGATGTCAATGCATTTG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T-----
droVir3 scaffold_12823:1232067-1232123 - GCTACA----TG---AA----CTATCAGGGCTGTAA-----------------------GCGCAAGTTTGATATTAACGCCTTTG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGATGC
droMoj3 scaffold_6496:677704-677760 + GCTATA----TG---AA----CTATCAAGGCTGCAA-----------------------GCGCAAGTTCGATGTCAATGCCTATG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGATGC
droGri2 scaffold_15245:5993902-5993958 + GCTTCA----TG---AA----CTATCAAGGCTGCAA-----------------------GCGGAAGTTTGATGTTAACGCCTACG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGATGC

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droAna3
GCTACA----TG---AA----TTATCAAGGCTGTCG-----------------------GCGTAAATTCGATGTAAACGCCTTCGTAATACCACTAACCATACAACATATAGACTTCTCATTTCATACAACGAAAATGGACGCAAAAATTTCTT---GCGACAGGCCCCCG-------------GAGGCCCCAGA-G-------------AGAA--TCTTA--CTCTCATTCTTACGCTCAT----------TTTTACGCTCATAATCTCATTTAACTTTTTTGGTTGTTCAGTCGCAGAGAGGCGCATCATCAAGAAGGTTC----TTCTGCSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.............................................................................................................................................................................................................................................................................................TTGTTCAGTCGCAGAGAGG.............................192012.60252000018369
...................................................................................................................................................ATTTCTT---GCGACAGGCCCCCG-------------.....................................................................................................................................................21208.1016216200000
.............................................................................................................................................................................................................................................................................................TTGTTCAGTCGCAGAGAGGCG...........................21208.05161147001400
.........................................................................................................................................................................................................................................................................................TTGGTTGTTCAGTCGCAGAG................................20207.9515915300600
...............................................................................................................................................................................................................................................................................................GTTCAGTCGCAGAGAGGCGCA.........................21207.6515359007870
.........................................................................................................................................................T---GCGACAGGCCCCCG-------------GAGGCC...............................................................................................................................................21206.1012212200000
..............................................................................................................................................................CGACAGGCCCCCG-------------GAGGCCCC.............................................................................................................................................21205.5511111100000
......................................................................................................................................................TCTT---GCGACAGGCCCCCG-------------GA...................................................................................................................................................20204.60929110000
..........................................................................................................................TCATACAACGAAAATGGACGC..............................................................................................................................................................................................21204.50909000000
............................................................................................................................................................................................................................................................................................GTTGTTCAGTCGCAGAGAGGC............................21204.30860000086
.......................................................................................................................................................................................................................................................................................TTTTGGTTGTTCAGTCGCAGA.................................21204.30868600000
.............................................................................................................................................................................................................................................................TTTACGCTCATAATCTCATTT...........................................................21204.05817800012
......................................................................................................................................................TCTT---GCGACAGGCCCCCG-------------GAG..................................................................................................................................................21203.45696400005
.............................................................................................................................................................................................................................................................................................................AGGCGCATCATCAAGAAGGTT...........21203.056136000250
...........................................................................................................................................................................................................................................................................................................AGAGGCGCATCATCAAGAAGG.............21203.00606000000
........................................................................................................................................................................................................................................................................................TTTGGTTGTTCAGTCGCAGAG................................21202.95590000059
...........................................................................................................................CATACAACGAAAATGGACGCA.............................................................................................................................................................................................21202.85575700000
.........................................................................................................................................................................................................................................................................................TTGGTTGTTCAGTCGCAGA.................................19202.655314004035
........................................................................................................................................................................................................................................................................................TTTGGTTGTTCAGTCGCAGAGA...............................22202.40489000039
......................................................................................................................................................................................................................................................................................................CGCAGAGAGGCGCATCATCA...................20202.154330003010
............................................................................................................................ATACAACGAAAATGGACGCA.............................................................................................................................................................................................20202.104215004230
............................................................................................................................................................................................................................................................................................GTTGTTCAGTCGCAGAGAGG.............................20202.10424200000
................................................................................................................................................................................................................................................................................................................CGCATCATCAAGAAGGTTC----TT....21202.00400003037
............................................................................................................................................................................................................................................................................................GTTGTTCAGTCGCAGAGAG..............................19201.95399000300
......................................................................................................................................................TCTT---GCGACAGGCCCCCG-------------GAGT.................................................................................................................................................22201.60323200000
......................................................................................................................................................TCTT---GCGACAGGCCCCCG-------------GAGGCC...............................................................................................................................................24201.50300300000
......................................................................................................................................................TCTT---GCGACAGGCCCCCG-------------G....................................................................................................................................................19201.50303000000
........................................................................................................................................................................................................................TCTTA--CTCTCATTCTTACGCT..............................................................................................21201.50302600040
...............................................................................................................................................................GACAGGCCCCCG-------------GAGGCCCCA............................................................................................................................................21201.45292900000
.............................................................................................................................................................................................................................................................................................TTGTTCAGTCGCAGAGAGGC............................20201.45292810000
.........................................................................................................................TTCATACAACGAAAATGGACG...............................................................................................................................................................................................21201.40282800000
.............................................................................................................................................................GCGACAGGCCCCCG-------------GAGGCCC..............................................................................................................................................21201.35272700000
......................................................................................................................................................TCTT---GCGACAGGCCCCCG-------------GAGGCCCC.............................................................................................................................................26201.30260260000
................................................................................................................................................................ACAGGCCCCCG-------------GAGGCCCCAG...........................................................................................................................................21201.30262600000
.........................................................................................................CATATAGACTTCTCATTTCAT...............................................................................................................................................................................................................21201.25251900015
................................................................................................................................................................................................................................................AT----------TTTTACGCTCATAATCTCA..............................................................21201.20242400000
...............................................................................................................................................................................................................................................................TACGCTCATAATCTCATTTA..........................................................20201.15232300000
..................................................................................................................................................AATTTCTT---GCGACAGGCCCC....................................................................................................................................................................20201.15232300000
.......................................................................................................................................................CTT---GCGACAGGCCCCCG-------------GA...................................................................................................................................................19201.10222200000
...................................................................................................................................................ATTTCTT---GCGACAGGCCCCCG-------------T....................................................................................................................................................22201.05211700004
............................................................................................................ATAGACTTCTCATTTCATACA............................................................................................................................................................................................................21201.05212100000
...........................................................................................................................................................................................................................................................................................GGTTGTTCAGTCGCAGAGAGG.............................21201.00200000020
.....................................................................................................................................................TTCTT---GCGACAGGCCCCCG-------------GAGGC................................................................................................................................................24201.00200200000
...................................................................................................................................................................................................................................................................................................................ATCATCAAGAAGGTTC----TTCTG.21200.95190007120
..........................................................................................................................................................................................................................................................................................TGGTTGTTCAGTCGCAGAGA...............................20200.90180000018
..............................................................................................................................................................................................................................................................................................TGTTCAGTCGCAGAGAGGCG...........................20200.90181800000
.................................................................................................................................................................................................................................................................................TAACTTTTTTGGTTGTTCAGT.......................................21200.80160000160
..........................................................................................................................................................................................................................TTA--CTCTCATTCTTACGCTCA............................................................................................21200.80160000016
......................................................................................................................................................................................................................................................................................TTTTTGGTTGTTCAGTCGCA...................................20200.75151500000
......................................................................................................................................AATGGACGCAAAAATTTCTT---G...............................................................................................................................................................................21200.75150000015
......................................................................................................................................................................................................................................................................................TTTTTGGTTGTTCAGTCGCAGA.................................22200.70140002012
....................................................................................................................................................TTTCTT---GCGACAGGCCCCCG-------------T....................................................................................................................................................21200.70141400000
...............................................................................................................................................................................................................................................................................................GTTCAGTCGCAGAGAGGCGC..........................20200.70144000010
............................................................................................................................................................................................................................................................................................................GAGGCGCATCATCAAGAAGGT............21200.65131300000
...........................................................................................................................CATACAACGAAAATGGACGC..............................................................................................................................................................................................20200.65131200010
..................................................................................................................................................AATTTCTT---GCGACAGGCCCCC...................................................................................................................................................................21200.60120000012
..................................................................................................................................................................................................................................................................................................................CATCATCAAGAAGGTTC----TTCT..21200.6012010056
....................................................................................................................................................TTTCTT---GCGACAGGCCCCCG-------------G....................................................................................................................................................21200.50100000010
.............................................................................................................................................................................................................................................................................................TTGTTCAGTCGCAGAGAGGCGT..........................22200.50101000000
................................................................................................................................................AAAATTTCTT---GCGACAGGCCC.....................................................................................................................................................................21200.50100100000
........................................................................................................................................................................................................................................................................................................CAGAGAGGCGCATCATCAAG.................20200.50100000100
........................................................................................................................................................................................................................................................................................TTTGGTTGTTCAGTCGCAGA.................................20200.50101000000
..............................................................................................................................................................CGACAGGCCCCCG-------------GAGGCCCCA............................................................................................................................................22200.459900000
.......................................................................................................................................................................................................................................................................................TTTTGGTTGTTCAGTCGCAG..................................20200.459700020
.........................................................................................................................................................................................................................CTTA--CTCTCATTCTTACGCT..............................................................................................20200.459900000
.................................................................................................................................................................................................................................................................................................TCAGTCGCAGAGAGGCGCATC.......................21200.459900000
.......................................................................................................................................................CTT---GCGACAGGCCCCCG-------------G....................................................................................................................................................18200.459900000
................................................................................................................................AACGAAAATGGACGCAAAA..........................................................................................................................................................................................19200.459000360
........................................................................................................................................................................................................................................................................................................CAGAGAGGCGCATCATCAAGA................21200.459000306
.....................................................................................................................................................................................................................................................................................TTTTTTGGTTGTTCAGTCGC....................................20200.408800000
......................................................................................................CAACATATAGACTTCTCATTTC.................................................................................................................................................................................................................22200.408800000
........................................................................................................................................................TT---GCGACAGGCCCCCG-------------GA...................................................................................................................................................18200.408800000
...........................................................................................................................................................................................................................................................................................GGTTGTTCAGTCGCAGAGAG..............................20200.408800000
...................................................................................................................................................................................................................................................................................ACTTTTTTGGTTGTTCAGTCG.....................................21200.357000070
..............................................................................................................................................................................................................................................................................................TGTTCAGTCGCAGAGAGGC............................19200.357000007
..........................................................................................................................................................................................................................................................................................TGGTTGTTCAGTCGCAGAGAGG.............................22200.357700000
...............................................................................................................................................................................................................................................CAT----------TTTTACGCTCATAATCTC...............................................................21200.357700000
........................................................................................................................................................................................................................................................................AATCTCATTTAACTTTTTTGG................................................21200.306600000
.............................................................................................................................................................................................................................................................................................TTGTTCAGTCGCAGAGAGGCT...........................21200.306000051
.............................................................................................................................................................GCGACAGGCCCCCG-------------GAGG.................................................................................................................................................18200.306600000
..........................................................................................................ATATAGACTTCTCATTTCAT...............................................................................................................................................................................................................20200.306600000
.................................................................................................................................................................................................................................................T----------TTTTACGCTCATAATCTCATT............................................................22200.306600000
........................................................................................................................................................................................................................................................................................TTTGGTTGTTCAGTCGCAGAGAGGCGC..........................27200.306141000
........................................................................................................................................................................CCG-------------GAGGCCCCAGA-G-------------AGAA--TC...................................................................................................................21200.306000105
..............................................................................................................................................................CGACAGGCCCCCG-------------GAGGCCC..............................................................................................................................................20200.306600000
......................................................................................................................................................TCTT---GCGACAGGCCCCCG-------------GAGG.................................................................................................................................................22200.255050000
..........................................................................................................................................................................................................................................................................................TGGTTGTTCAGTCGCAGAGAGGCGC..........................25200.255050000
...............................................................................................................................................AAAAATTTCTT---GCGACAGGCC......................................................................................................................................................................21200.255050000
........................................................................................................................................................................................................................................................................................TTTGGTTGTTCAGTCGCAGAGAGGCG...........................26200.255410000
.......................................................................................................................................................................................................................................CTTACGCTCAT----------TTTTACGCTC.......................................................................21200.255000050
..........................................................................................................................................................................................................................................................................................................GAGAGGCGCATCATCAAGA................19200.255300002
...................................................................................................................................................................................................................................CATTCTTACGCTCAT----------TTTTAC...........................................................................21200.255300002
...........................................................................................................................CATACAACGAAAATGGACGCAAA...........................................................................................................................................................................................23200.255500000
........................................................................................................................................................................................................................................................................................TTTGGTTGTTCAGTCGCAGAGAGG.............................24200.255003020
.........................................................................................................................................................................................................................................................................................TTGGTTGTTCAGTCGCAGAGAG..............................22200.204000004
.............................................................................................................................................................................................................................................................TTTACGCTCATAATCTCATTTAACT.......................................................25200.204220000
.................................................................................................................................................................................................................................CTCATTCTTACGCTCAT----------TTTT.............................................................................21200.204000040
..............................................................................................................................................................CGACAGGCCCCCG-------------GAGGCCCCAG...........................................................................................................................................23200.204300001
..................................................................................................................................................................................................................................................................GCTCATAATCTCATTTAACT.......................................................20200.204400000
.....................................................................................................................................................TTCTT---GCGACAGGCCCCCG-------------GAGGCC...............................................................................................................................................25200.204400000
................................................................................................................................................................................................................................................................................................TTCAGTCGCAGAGAGGCGCATT.......................22200.204000040
.........................................................................................................................................................................................................................................................................................................AGAGAGGCGCATCATCAAG.................19200.204000031
......................................................................................................................................................................................................................................................................................TTTTTGGTTGTTCAGTCGCAGAGAGG.............................26200.204210010
.........................................................................................................................................................................................................................................................................................TTGGTTGTTCAGTCGCAGAGAGGC............................24200.204040000
........................................................................................................................................................TT---GCGACAGGCCCCCG-------------GAG..................................................................................................................................................19200.204400000
............................................................................................................................................................................................................................................................................................GTTGTTCAGTCGCAGAGAGGT............................21200.204000040
............................................................................................................................................................................................................................................................................................GTTGTTCAGTCGCAGAGAGGCGT..........................23200.204000004
.......................................................................................................................................................................................................................................................................................TTTTGGTTGTTCAGTCGCA...................................19200.204400000
...........................................................................................................TATAGACTTCTCATTTCATA..............................................................................................................................................................................................................20200.204400000
...............................................................................................................................................................................................................................CTCTCATTCTTACGCTCAT----------T................................................................................20200.204400000
...........................................................................................................................................................................................................................................................................................GGTTGTTCAGTCGCAGAGAGGC............................22200.153300000
........................................................................................................................................................................................................................................................................................TTTGGTTGTTCAGTCGCAGAGAGGCGCA.........................28200.153210000
...........................................................................................................................CATACAACGAAAATGGACG...............................................................................................................................................................................................19200.153000102
..............................................................................................................................................................................................................................................TCAT----------TTTTACGCTCATAATCT................................................................21200.153200010
................................................................................................................................................................................................................................................................................................................CGCATCATCAAGAAGGTTC----TTCTGC25200.153030000
......................................................................................................................................................................................................................................................................................................CGCAGAGAGGCGCATCATC....................19200.153300000
..........................................................................................................................................................................................................................................................................................TGGTTGTTCAGTCGCAGAGAGT.............................22200.153000003
...........................................................................................................................................................................................................................................................................................................AGAGGCGCATCATCAAGAA...............19200.153300000
..................................................................................................................................................AATTTCTT---GCGACAGGCCCCCG-------------.....................................................................................................................................................22200.153300000
.........................................................................................................CATATAGACTTCTCATTTCA................................................................................................................................................................................................................20200.153300000
...........................................................................................................................CATACAACGAAAATGGACGCAAAA..........................................................................................................................................................................................24200.153030000
....................................................................................................................................................TTTCTT---GCGACAGGCCCCCG-------------GAG..................................................................................................................................................23200.153300000
.........................................................................................................................................................................................................................................TACGCTCAT----------TTTTACGCTCA......................................................................20200.153300000
.............................................................................................................................................................................................................................................................................................TTGTTCAGTCGCAGAGAGGCGA..........................22200.153000003
.......................................................................................................................................................CTT---GCGACAGGCCCCCG-------------GAGGC................................................................................................................................................22200.153300000
..................................................................................................................................................................................................................................................................................................................CATCATCAAGAAGGTTC----TTCTG.22200.153000030
.....................................................................................................................................................................................................................A--TCTTA--CTCTCATTCTTACGCT..............................................................................................22200.153300000
.......................................................................................................................................................................................................................................................................................................GCAGAGAGGCGCATCATCA...................19200.153300000
.........................................................................................................................................................................................................................................................................................TTGGTTGTTCAGTCGCAGAGAGG.............................23200.153020010
.............................................................................................................................TACAACGAAAATGGACGCA.............................................................................................................................................................................................19200.153300000
...........................................................................................................................CATACAACGAAAATGGACGCAAAAATTT......................................................................................................................................................................................28200.153030000
...................................................................................................................................................................................................................................................................................................AGTCGCAGAGAGGCGCATCAT.....................21200.102000020
........................................................................................................................................................TT---GCGACAGGCCCCCG-------------GAGGCCCC.............................................................................................................................................24200.102200000
................................................................................................................................................................................................................................................................................................TTCAGTCGCAGAGAGGCGC..........................19200.102000200
................................................................................................................................................................................................................................................................................................................CGCATCATCAAGAAGGTTC----TTCT..23200.102020000
........................................................................................................................................................TT---GCGACAGGCCCCCG-------------GT...................................................................................................................................................18200.102200000
............................................................................................................................ATACAACGAAAATGGACGC..............................................................................................................................................................................................19200.102000002
........................................................................................................................................................TT---GCGACAGGCCCCCG-------------GAGGCCCCAGA-.........................................................................................................................................27200.102020000
.........................................................................................................................................................T---GCGACAGGCCCCCG-------------GAGGCCC..............................................................................................................................................22200.102200000
.......................................................................................................................................................CTT---GCGACAGGCCCCCG-------------GAGGCC...............................................................................................................................................23200.102020000
............................................................................................................................................................................................................................................................................................................GAGGCGCATCATCAAGAAGGTT...........22200.102200000
.............................................................................................................................................................................................................................................................................................TTGTTCAGTCGCAGAGAGGCGC..........................22200.102001100
...............................................................................................................................................................................................................................................................TACGCTCATAATCTCATTTAAC........................................................22200.102020000
...................................................................................................ATACAACATATAGACTTCTCA.....................................................................................................................................................................................................................21200.102200000
........................................................................................................................................................................................................................................................................................................CAGAGAGGCGCATCATCAAGAAGG.............24200.102000002
..........................................................................................................................................................................................................................................................................................TGGTTGTTCAGTCGCAGAGAG..............................21200.102001100
......................................................................................................................................................................................................................................................................................................CGCAGAGAGGCGCATCATCAAG.................22200.102200000
......................................................................................................................................................................CCCCG-------------GAGGCCCCAGA-G-------------AGAA--.....................................................................................................................21200.102200000
.................................................................................................................................................................................................................................................................................TAACTTTTTTGGTTGTTCAG........................................20200.102200000
................................................................................................................................................................................................................................TCTCATTCTTACGCTCAT----------TT...............................................................................20200.102200000
...........................................................................................................................CATACAACGAAAATGGACGCAA............................................................................................................................................................................................22200.102010010
....................................................................................................................................................................................................................................................................................CTTTTTTGGTTGTTCAGTCG.....................................20200.102000101
.................................................................................................................................................................................................................................................T----------TTTTACGCTCATAATCTCA..............................................................20200.102200000
.....................................................................................................................................................TTCTT---GCGACAGGCCCCCG-------------GAGGCCCT.............................................................................................................................................27200.102020000
....................................................................................................................................................................................................................................................................................................................TCATCAAGAAGGTTC----TTCTGC21200.102000101
................................................................................................................................................................ACAGGCCCCCG-------------GAGGCCCCA............................................................................................................................................20200.102200000
......................................................................................................................................................................................................................................................................................TTTTTGGTTGTTCAGTCGCAGAGAG..............................25200.102100010
..............................................................................................................................................................................................................................................................................ATTTAACTTTTTTGGTTGTTCAGTCGCA...................................28200.102200000
..............................................................................................................................................................................................................................................................................................TGTTCAGTCGCAGAGAGG.............................18200.102000020
................................................................................................................................................................................................................................TCTCATTCTTACGCTCAT----------TTT..............................................................................21200.102200000
...............................................................................................................................................................................................................................................................................................................GCGCATCATCAAGAAGGTTC----TTCTG.25200.102100001
.........................................................................................................................................................T---GCGACAGGCCCCCG-------------GAGGCCCCAGA-.........................................................................................................................................26200.102200000
...........................................................................................................................................................................................................................................................................CTCATTTAACTTTTTTGGTTG.............................................21200.102200000
................................................................................................................................AACGAAAATGGACGCAAAAA.........................................................................................................................................................................................20200.102000002
.......................................................................................................................................................................................................................................................................TAATCTCATTTAACTTTTTTGGTTGT............................................26200.102020000
........................................................................................................................................................................................................................................TTACGCTCAT----------TTTTACGCTCA......................................................................21200.102000002
.................................................................................................................................................................................................................................................................................................................GCATCATCAAGAAGGTTC----TTC...21200.102000002
.........................................................................................................................................................................................................................CTTA--CTCTCATTCTTACGCTCA............................................................................................22200.102200000
..................................................................................................................................................................................................................................TCATTCTTACGCTCAT----------TTTT.............................................................................20200.102200000
........................................................................................................................................................TT---GCGACAGGCCCCCG-------------GAGGCCCCAGA-A-------------...........................................................................................................................28200.102020000
..................................................................................................................................................................................................................................................................................AACTTTTTTGGTTGTTCAGTCGCAGA.................................26200.051100000
.......................................................................................................................................................................................................................................................................................TTTTGGTTGTTCAGTCGCAGAG................................22200.051000010
.........................................................................................................................................................................................................................................TACGCTCAT----------TTTTACGCTCAT.....................................................................21200.051000100
.............................................................................................................................................................................................................................................................................................................AGGCGCATCATCAAGAAGG.............19200.051000001
......................................................................................................................................................................CCCCG-------------GAGGCCCCAGA-G-------------AGA........................................................................................................................20200.051100000
....................................................................................................................................................................................................................................................................................CTTTTTTGGTTGTTCAGTCGCA...................................22200.051000100
.............................................................................................................................................................................................................................................................TTTACGCTCATAATCTCATTTAAC........................................................24200.051100000
..........................................................................................................................................................................................................................................................................................TGGTTGTTCAGTCGCAGAGAGGCGCAT........................27200.051100000
........................................................................................................................................................................................................................................................................................TTTGGTTGTTCAGTCGCAG..................................19200.051000001
..............................................................................................................................................................................................................................................................................................TGTTCAGTCGCAGAGAGGCGCATCATC....................27200.051010000
.......................................................................................................................................................CTT---GCGACAGGCCCCCG-------------GAGGCCCCAG...........................................................................................................................................27200.051100000
............................................................................................................................................................................................................................................................................TCATTTAACTTTTTTGGTTGT............................................21200.051000010
.......................................................................................................................................................................................................................................................................................TTTTGGTTGTTCAGTCGCAGAGAGGCG...........................27200.051100000
.............................................................................................................................................................................................................................................................................................TTGTTCAGTCGCAGAGAGGCGCT.........................23200.051000010
...............................................................................................................................................................................................................................................................................TTTAACTTTTTTGGTTGTTCAGT.......................................23200.051000001
................................................................................................................................................................................................................................................................................................TTCAGTCGCAGAGAGGCGCATCATCAAG.................28200.051100000
.................................................................................................................................ACGAAAATGGACGCAAAAATT.......................................................................................................................................................................................21200.051010000
........................................................................................................................TTTCATACAACGAAAATGGACGCAA............................................................................................................................................................................................25200.051100000
..............................................................................................................................................................................................................................................................TTACGCTCATAATCTCATTTA..........................................................21200.051000010
........................................................................................................................................................................................................................................................................................TTTGGTTGTTCAGTCGCAGAGAGGA............................25200.051000001
..............................................................................................................................................................................................................................................................................................................GGCGCATCATCAAGAAGGT............19200.051000010
........................................................................................................................................................................................................................................TTACGCTCAT----------TTTTACGCTCAT.....................................................................22200.051000010
................................................................................................................................................AAAATTTCTT---GCGACAGGCC......................................................................................................................................................................20200.051000010
.........................................................................................................................................................T---GCGACAGGCCCCCG-------------GAGT.................................................................................................................................................19200.051100000
....................................................................................................................................................................................................................................................................................................................TCATCAAGAAGGTTC----TTCTG.20200.051100000
...............................................................................................................................................................................................................................................................................................GTTCAGTCGCAGAGAGGCG...........................19200.051100000
.........................................................................................................................................................................................................................................................................ATCTCATTTAACTTTTTTGGT...............................................21200.051100000
....................................................................................................................................................................................................................................................................................................GTCGCAGAGAGGCGCATCATCAAGAAGGT............29200.051010000
.........................................................................................................................................................................................................................................TACGCTCAT----------TTTTACGCTCATAATCTC...............................................................27200.051100000
.................................................................................................................................................AAATTTCTT---GCGACAGGCCCC....................................................................................................................................................................21200.051000100
.............................................................................................................................................................................................................................................................................................TTGTTCAGTCGCAGAGAGTT............................20200.051000010
...............................................................................................................................................................................................................................................................TACGCTCATAATCTCATTT...........................................................19200.051100000
.......................................................................................................................................................................CCCG-------------GAGGCCCCAGA-G-------------AGAA--TCTTA--C.............................................................................................................26200.051010000
.................................................................................................................................................................................................................................CTCATTCTTACGCTCAT----------TTT..............................................................................20200.051100000
......................................................................................................................................................................CCCCG-------------GAGGCCCCAGA-G-------------AGAA--T....................................................................................................................22200.051000001
.............................................................................................................................TACAACGAAAATGGACGCAA............................................................................................................................................................................................20200.051000100
...........................................................................................................TATAGACTTCTCATTTCATACA............................................................................................................................................................................................................22200.051100000
droBip1
TAAATT----GG---CA----ACAC------TGGCT----GCTTGTGT------GCAGACCC------------------CTACGTAAAACCACTAACCATACAGCATATAGACAACCCATTTCATACAACGAAAATGGACGCGAAAATTTCTT---GCGACAGGCCCCAG-------------CAGGCCCCAGA-G-------------CGGATTTCTTACGCTCT----CTTACGCTCATCGTTCGTTCATCTTACGCTCATTCTCGCATTAAATGTTTTCTGTTTCTCAGTCTCTAAACGGAGCGCGATGAAGAAGGTTG----GCCTGCSizeHit CountTotal NormTotal
No Reads
droKik1
AGGTTAAATT-TAA-------------------------------------------GCTCA------------------CTTGGTATGTCCACTAACCATACAAAATAAAGAAAAGTCATTTCATACAACGAAAATGGGACCAAAAACTTCTTA--GCGACAGGCCCCAG-AGCTGTTCGCGATAGGCCCCACA-GCTTCGTGTGCGCTCGGGTTTTTCGCTCTCTCATTCTT----------------------ATGCTCGCACACTGATTGCGAGA--------GTTCAGTCGCAGAGTGGCGGATCTTC-AGAAGGTTG----CTCTGCSizeHit CountTotal NormTotal
No Reads
droFic1
GGTTTA----TG---AA----CTATCAGGGCTGCAA-----------------------GCGAAAGTTCGATGTGAATGCCTTCG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTATGCSizeHit CountTotal NormTotal
No Reads
droEle1
TACATAAAGT-TAACCAACACTGGCCAG-A----CT----ACATATGT------GGCAAGCGCAACTT---------------GGTACTATCACTAACCATACAACATATAGACTGGTCATTTCATACGACGCATTTGGACACAAAAATTC-GGACCGCGGAAGGTCCACCGCTCTCACAGCAGCAGGTCCAT-GCACTTCGTGTGCGTTCGGGTTTTTTACTCTCTCATTCTTATTCTCAT----------TTTTATGCTCGCGCACTCATTGCACGAGTTCAGTCGTTCAGTCGCAGAGAGGCGCTTTTCGAAGAAGGCTG----TCCTGCSizeHit CountTotal NormTotal
No Reads
droRho1
ACTACA----CT---AC----TGTACAGATCTGTCATGCTACAAATGAGTACAT-TCATGCAGAAGTCTAGTG----------TGTACTACCAATAACCATACAACATATAGACTGGTTATTTCATACAACGAAAATGGACCCAAAAATTTCTTA--GCGACAGGCCCCAG-AGCTCTTAGCAGCAGGCCCCGGACGCTTCATGTGCGTTCGGGTTTTTTGCGCTCTCATTCTTATTCTCAT----------TTTGATGCTCGCGCGCTCATTGCATGAGTTGAATCGTTCAGTCGCAGAGAGGCGCATTTTGAAGAAGGTTGC---GCCTGCSizeHit CountTotal NormTotal
No Reads
droBia1
GATATA----TG---AA----CTACCAGGGGTGCAA-----------------------GCGAAAGTTCGATGTTAACGCCTTCG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCATGCSizeHit CountTotal NormTotal
No Reads
droTak1
A------------------------------------------------------------------------------------------------------------TAGACTACTCATTTCATGCAACGAAAATGGACACAACAATTTCTTA--GCGACAGGCCCCAGGGGCTCTTAGCAGCAGTTCCCG-ACGCTTCGTGAGCATTCGGGTTTTTTACTCTCTCATTCATATTGTCAT----------TTTTACGCTCGCGCACTCATTGCACGAATTCGGTCGTTCAGTCGCAGAGAGTCGCATTTTAAAGAAGGTTGCCCGCCCTGCSizeHit CountTotal NormTotal
No Reads
droEug1
GGTACA----TG---AA----CTATCAGGGGTGTCG-----------------------GCGAAAGTTTGATGTAAACGCCTTCG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCATGCSizeHit CountTotal NormTotal
No Reads
dm3
GGTACA----TG---AA----CTATCAGGGATGCCG-----------------------TCGCAAATTCGATGTAAATGCCTTTG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCATGCSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
...............AA----CTATCAGGGATGCCG-----------------------TC................................................................................................................................................................................................................................................................................1923.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
..TACA----TG---AA----CTATCAGGGATGCCG-----------------------TC................................................................................................................................................................................................................................................................................2523.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000040000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................CTATCAGGGATGCCG-----------------------TCGCAAA...........................................................................................................................................................................................................................................................................2222.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................A----CTATCAGGGATGCCG-----------------------TCGCAAATTCGA......................................................................................................................................................................................................................................................................2822.0040000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....CA----TG---AA----CTATCAGGGATGCCG-----------------------T.................................................................................................................................................................................................................................................................................2222.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............AA----CTATCAGGGATGCCG-----------------------TCGCAAATT.........................................................................................................................................................................................................................................................................2621.5030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................AGGGATGCCG-----------------------TCGCAAATTCGATGT...................................................................................................................................................................................................................................................................2521.5030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
...............................TGCCG-----------------------TCGCAAATTCGATGTAAATGCC............................................................................................................................................................................................................................................................2721.5030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000100001000
....................................................................CGATGTAAATGCCTTTG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TC....1921.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................AGGGATGCCG-----------------------TCGCAAATT.........................................................................................................................................................................................................................................................................1921.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000
...............................TGCCG-----------------------TCGCAAATTCGATGTAAATGC.............................................................................................................................................................................................................................................................2621.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................GATGCCG-----------------------TCGCAAATTCGATG....................................................................................................................................................................................................................................................................2121.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
...........................GGGATGCCG-----------------------TCGCAAATTC........................................................................................................................................................................................................................................................................1921.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................ATCAGGGATGCCG-----------------------TCGCAAATTC........................................................................................................................................................................................................................................................................2321.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000100000
..........TG---AA----CTATCAGGGATGCCG-----------------------TCGC..............................................................................................................................................................................................................................................................................2321.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
....CA----TG---AA----CTATCAGGGATGCCG-----------------------..................................................................................................................................................................................................................................................................................2121.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................TATCAGGGATGCCG-----------------------TCGC..............................................................................................................................................................................................................................................................................1820.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
................A----CTATCAGGGATGCCG-----------------------TCG...............................................................................................................................................................................................................................................................................1920.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
....................................................................CGATGTAAATGCCTTTG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCA...2020.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...................................................................TCGATGTAAATGCCTTTG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCATGC2420.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000
..TACA----TG---AA----CTATCAGGGATGCCG-----------------------TCGC..............................................................................................................................................................................................................................................................................2720.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
..............................ATGCCG-----------------------TCGCAAATTCGA......................................................................................................................................................................................................................................................................1820.5010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................TCAGGGATGCCG-----------------------TCGCAAATTCGATG....................................................................................................................................................................................................................................................................2620.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000
..TACA----TG---AA----CTATCAGGGATGCC..........................................................................................................................................................................................................................................................................................................2220.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
....CA----TG---AA----CTATCAGGGATGCCG-----------------------TCGC..............................................................................................................................................................................................................................................................................2520.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...........................GGGATGCCG-----------------------TCGCAAATTCGATGT...................................................................................................................................................................................................................................................................2420.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
............................GGATGCCG-----------------------TCGCAAATTC........................................................................................................................................................................................................................................................................1820.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...................................G-----------------------TCGCAAATTCGATGTAAATGCCTT..........................................................................................................................................................................................................................................................2520.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................TCGATGTAAATGCCTTTG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCATG.2320.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.........................CAGGGATGCCG-----------------------TCGCAA............................................................................................................................................................................................................................................................................1720.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................ATGCCG-----------------------TCGCAAATTCGATGTAAATGCC............................................................................................................................................................................................................................................................2820.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
........................TCAGGGATGCCG-----------------------TCGCAAATTCGA......................................................................................................................................................................................................................................................................2420.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
.........................CAGGGATGCCG-----------------------TCGCAAATTC........................................................................................................................................................................................................................................................................2120.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...........................GGGATGCCG-----------------------TCGCAAATTCGA......................................................................................................................................................................................................................................................................2120.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
GGTACA----TG---AA----CTATCAGGG...............................................................................................................................................................................................................................................................................................................1920.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...............................TGCCG-----------------------TCGCAAATTCGATG....................................................................................................................................................................................................................................................................1920.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
................A----CTATCAGGGATGCCG-----------------------TCGCAAATTC........................................................................................................................................................................................................................................................................2620.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...........G---AA----CTATCAGGGATGCCG-----------------------TCGCAAA...........................................................................................................................................................................................................................................................................2520.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................TCAGGGATGCCG-----------------------TCGCAAATT.........................................................................................................................................................................................................................................................................2120.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
.............................GATGCCG-----------------------TCGCAAATTCGATGTAAATGC.............................................................................................................................................................................................................................................................2820.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
........................TCAGGGATGCCG-----------------------TCGCAAATTCGATGT...................................................................................................................................................................................................................................................................2720.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
GGTACA----TG---AA----CTATCAGGGATGCC..........................................................................................................................................................................................................................................................................................................2420.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...............AA----CTATCAGGGATGCCG-----------------------TCG...............................................................................................................................................................................................................................................................................2020.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
............................GGATGCCG-----------------------TCGCAAATTCGATA....................................................................................................................................................................................................................................................................2220.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........TG---AA----CTATCAGGGATGCCG-----------------------TC................................................................................................................................................................................................................................................................................2120.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........G---AA----CTATCAGGGATGCCG-----------------------TCGC..............................................................................................................................................................................................................................................................................2220.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
...ACA----TG---AA----CTATCAGGGATGCCG-----------------------TCGCA.............................................................................................................................................................................................................................................................................2720.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000
droSec2
GGTACA----TG---AA----CTATCAAGGATGCCG-----------------------TCGCAAATTTGATGTAAATGCCTTTG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCATGCSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
No Reads
droYak3
GGTACA----TG---AA----CTATCAGGGATGCAA-----------------------ACGCAAATTCGATGTAAATGCCTTTG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCATGCSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
No Reads
droEre2
GGTACA----TG---AA----CTATCAGGGATGCCG-----------------------CCGCAAATTCGATGTAAATGCCTTTG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCATGCSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
No Reads
dp5
GCTACA----TG---AA----CTATCAAGGATGCAA-----------------------GCGCAAGTTCGACGTGAACGCCTTCG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCATGCSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
No Reads
droPer2
CA-------------------------------------------------------------------------------------------CTAACCATACAGTATATGGATGTATCAGTTCATACAGGGAAAACGTACCCACAGAATTTTCT--GCGGCAACTCCCAG-AGG--------------------------------------------------------------------------------------------------------------------------------------------------------GCCTAGSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
No Reads
droWil2
GCTACA----TG---AA----CTATCAGGGTTGCAA-----------------------GAGAAAATTCGATGTCAATGCATTTG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T-----SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
No Reads
droVir3
GCTACA----TG---AA----CTATCAGGGCTGTAA-----------------------GCGCAAGTTTGATATTAACGCCTTTG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGATGCSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
........................TCAGGGCTGTAA-----------------------GCGCAAGTTTGATAT...................................................................................................................................................................................................................................................................2711.001000000000000000000000000000010000000000000000000000000000000000
droMoj3
GCTATA----TG---AA----CTATCAAGGCTGCAA-----------------------GCGCAAGTTCGATGTCAATGCCTATG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGATGCSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads
droGri2
GCTTCA----TG---AA----CTATCAAGGCTGCAA-----------------------GCGGAAGTTTGATGTTAACGCCTACG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGATGCSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/18/2015 at 03:38 AM