ID:

dan_2016

 Coordinate:

scaffold_13266:14591704-14591847 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-2.1 -1.5

Flybase annnotation

CDS [Dana\GF11356-cds]; CDS [Dana\GF11356-cds]; exon [dana_GLEANR_11420:1]; exon [dana_GLEANR_11420:2]; intron [Dana\GF11356-in]

No Repeatable elements found

Sense Strand Reads

##################################################------------------------------------------------------------------------------------------------------------------------------------------------##################################################
TACACCGTTTGAGCGACAGACAATACATGGAGCTCGATGGCCTTTTTCAGGTAAGTAGAATGACCGTACTTCTGATACAATTTGGATGTTTACATCTTTGTTGCAACGGTTTTCTTTTCGCCCCGTCGCCACTCCACCCACTCGAAAAATTTTTGGCCCCAAAAAAAAAACAACACACCCACATACGCACGTAGACGATGGACATGCCCACCAGCCACGATTCGGAGACGGATCTGGAGTCTGA
**************************************************************************************************************************.....((((......................))))........................*************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M058
embryo
 V106
head
 M044
female body
 V105
male body		 V039
embryo
 V055
head
.............CGACAGACAATACATGGAGCTCGATGG............................................................................................................................................................................................................ 27 0 1 1.00 1 0 0 0 1 0 0
..................................................................................................................................................................AAAAAAAACAACCCACCCAC.............................................................. 20 1 1 1.00 1 1 0 0 0 0 0
.........TGAGCGACAGACAATACATGGAGC................................................................................................................................................................................................................... 24 0 1 1.00 1 1 0 0 0 0 0
..................................................................................................................................................................AAAAAAAACAACACACCCA............................................................... 19 0 1 1.00 1 1 0 0 0 0 0
..................................................................................................................................................................AGAAAAAACAACACACCCAC.............................................................. 20 1 1 1.00 1 1 0 0 0 0 0
.....................AATACATGGAGCTCGATGGCC.......................................................................................................................................................................................................... 21 0 1 1.00 1 0 1 0 0 0 0
.......................TACATGGAGCTCGATGGCCT......................................................................................................................................................................................................... 20 0 1 1.00 1 0 1 0 0 0 0
..........................................................................................................................CCGTCGCCACTCCACCCACTC..................................................................................................... 21 0 1 1.00 1 0 0 1 0 0 0
.................................................................................................................................................................AAAAAAGAACAACACACCCAC.............................................................. 21 1 1 1.00 1 1 0 0 0 0 0
................................................................................................................................................................AAAAGTAAAACAACACACCCA............................................................... 21 2 1 1.00 1 1 0 0 0 0 0
.................................................................................................................................................................AAAAGAAAACAACACACCCACC............................................................. 22 2 2 1.00 2 2 0 0 0 0 0
.........................................................GAATGACAGTACATCTGACA....................................................................................................................................................................... 20 3 2 0.50 1 0 0 0 0 1 0
................................................................................................................................................................AAAAAAAAAACAACACACC................................................................. 19 0 2 0.50 1 1 0 0 0 0 0
.....................................................AGTGGAATGACCCTACTTC............................................................................................................................................................................ 19 2 2 0.50 1 0 0 0 0 0 1
.................................................................................................................................................................AAAAAAAAACAACCCACCCA............................................................... 20 1 2 0.50 1 1 0 0 0 0 0
................................................................................................................................................................AAAAAAAAAACAACCCACC................................................................. 19 1 7 0.43 3 3 0 0 0 0 0
................................................................................................................................................AAAAATTTTTGCACCCAAAAAAA............................................................................. 23 2 3 0.33 1 1 0 0 0 0 0
..................................................................................................................................................................AAAAAAGACAACACACCCA............................................................... 19 1 3 0.33 1 1 0 0 0 0 0
..................................................................................................................................................................AAAAAAAACAACCCACCCA............................................................... 19 1 3 0.33 1 1 0 0 0 0 0
...................................................................................................................................................AATTTTAGGCCCCACCAAAAAAA.......................................................................... 23 3 3 0.33 1 1 0 0 0 0 0
..................................................................................................................................................................AAATAAAACAACCCACCCACA............................................................. 21 2 3 0.33 1 1 0 0 0 0 0
..................................................................................................................................................................AAAAAAAACAATACACCCA............................................................... 19 1 3 0.33 1 1 0 0 0 0 0
...................................................................................................................................................................AAAAAAAGAACACACCCAC.............................................................. 19 1 3 0.33 1 1 0 0 0 0 0
..................................................................................................................................................................AAAGAAAACAACACACCCACC............................................................. 21 2 3 0.33 1 1 0 0 0 0 0
.................................................................................................................................................................AAAAAAAACCAACACACCCA............................................................... 20 1 4 0.25 1 1 0 0 0 0 0
.................................................................................................................................................................AAAAAAAAACAACACACCCCCC............................................................. 22 2 4 0.25 1 1 0 0 0 0 0
.................................................................................................................................................................AAAAAAAAACAACCCACC................................................................. 18 1 10 0.20 2 2 0 0 0 0 0
.................................................................................................................................................................AAAAAACAACAACACACCCA............................................................... 20 1 5 0.20 1 1 0 0 0 0 0
................................................................................................................................................................AAAAGAAACACAACACACCCA............................................................... 21 2 6 0.17 1 0 0 0 0 1 0
..................................................................................................................................................................AAAAAAAACCACACACCCA............................................................... 19 1 6 0.17 1 1 0 0 0 0 0
................................................................................................................................................................AAAAAAAAAACAACACCCCC................................................................ 20 1 6 0.17 1 1 0 0 0 0 0
.................................................................................................................................................................AAAAAACAACAACACCCCCAC.............................................................. 21 2 7 0.14 1 0 0 0 0 1 0
..................................................................................................................................................................AAAAAAAACAACCCTCCCAC.............................................................. 20 2 7 0.14 1 1 0 0 0 0 0
.................................................................................................................................................................AAAAAAAAACAACACACCCCAA............................................................. 22 2 7 0.14 1 1 0 0 0 0 0
................................................................................................................................................................AAAAAAAAGACAACACACC................................................................. 19 1 7 0.14 1 1 0 0 0 0 0
.................................................................................................................................................................AAAAAAAAACAACACAACCA............................................................... 20 1 8 0.13 1 1 0 0 0 0 0
.................................................................................................................................................................AAAAAAAAACAGCGCACCGACA............................................................. 22 3 8 0.13 1 0 0 0 0 1 0
.................................................................................................................................................................AACAACAAACAACACACCCAC.............................................................. 21 2 8 0.13 1 1 0 0 0 0 0
................................................................................................................................................................AAAATAAAAACAACACACCCC............................................................... 21 2 8 0.13 1 1 0 0 0 0 0
................................................................................................................................................................AAAAAAAAAACAGCACACC................................................................. 19 1 8 0.13 1 1 0 0 0 0 0
................................................................................................................................................................AAAAAAAAAACAAGACACC................................................................. 19 1 10 0.10 1 1 0 0 0 0 0
...................................................................................................................................................................AAAAAAACCACACTCCCACA............................................................. 20 2 10 0.10 1 1 0 0 0 0 0
................................................................................................................................................................AAAAAAGAGACAACACACC................................................................. 19 2 20 0.10 2 2 0 0 0 0 0
..................................................................................................................................................................AAAAAAACCAACACCCCCAC.............................................................. 20 2 10 0.10 1 1 0 0 0 0 0
.................................................................................................................................................................AAAAAAAGACAACCCACCCA............................................................... 20 2 10 0.10 1 1 0 0 0 0 0
.................................................................................................................................................................AAAAAAAAACAGCACACCCGCAC............................................................ 23 3 11 0.09 1 1 0 0 0 0 0
..................................................................................................................................................................AACAAAAACAACCCACCCAC.............................................................. 20 2 11 0.09 1 1 0 0 0 0 0
...................................................................................................................................................................AAAAAAAGATCACACCCAC.............................................................. 19 2 11 0.09 1 1 0 0 0 0 0
...............ACAGGCAAGACATGGCGCT.................................................................................................................................................................................................................. 19 3 12 0.08 1 0 0 1 0 0 0
.................................................................................................................................................................AAAAGAAAACAACACACCCC............................................................... 20 2 13 0.08 1 1 0 0 0 0 0
................................................................................................................................................................AAAAAAAAAACATCTCACCC................................................................ 20 2 13 0.08 1 1 0 0 0 0 0
..................................................................................................................................................................AAACAAAACAACCCACCCAC.............................................................. 20 2 14 0.07 1 1 0 0 0 0 0
................................................................................................................................................................ACCAAAAAAACAACACACCC................................................................ 20 2 15 0.07 1 1 0 0 0 0 0
..................................................................................................................................................................AAAAGAAACAACCCACCCA............................................................... 19 2 15 0.07 1 1 0 0 0 0 0
................................................................................................................................................................CAAAAAAAAACAACCCACCC................................................................ 20 2 15 0.07 1 1 0 0 0 0 0
.......TTTGAGCGAAAGTCAATACG......................................................................................................................................................................................................................... 20 3 15 0.07 1 0 0 0 0 0 1
.................................................................................................................................................................AAAAAAAAACGACAGACCCA............................................................... 20 2 15 0.07 1 1 0 0 0 0 0
...................................................................................................................................................................AAAAAACGAACACACCCACA............................................................. 20 2 16 0.06 1 1 0 0 0 0 0
.................................................................................................................................................................AAAAAACAACAACCCACCCA............................................................... 20 2 17 0.06 1 1 0 0 0 0 0
................................................................................................................................................................AGAAAAAAAAGAACACACCC................................................................ 20 2 17 0.06 1 1 0 0 0 0 0
................................................................................................................................................................AAAAAAAAAAGAACATACCCA............................................................... 21 2 17 0.06 1 1 0 0 0 0 0
.................................................................................................................................................................AAAGAAAAACAACACCCCC................................................................ 19 2 17 0.06 1 1 0 0 0 0 0
..................................................................................................................................................................AAAAAAAACAACAAACCCA............................................................... 19 1 18 0.06 1 1 0 0 0 0 0
...................................................................................................................................................................AAAAAAACAACACAACCACC............................................................. 20 2 18 0.06 1 1 0 0 0 0 0
....................................................................................................................................................................ATTAAACAACACACCCACA............................................................. 19 2 18 0.06 1 1 0 0 0 0 0
................................................................................................................................................................TAAAAAAACACAACACCCCCAC.............................................................. 22 3 18 0.06 1 1 0 0 0 0 0
........................................................................................................................................................................................................GAGATGTCCACCAGCCACCA........................ 20 3 19 0.05 1 1 0 0 0 0 0
....................................................................................................................................................................AAAAAACACCACCCCCACA............................................................. 19 2 19 0.05 1 1 0 0 0 0 0
...............................................................................................................................................................CAAAAAAAAAACACCCCACC................................................................. 20 2 19 0.05 1 1 0 0 0 0 0
..................................................................................................................................................................AAATAAAACAGCACACCCACC............................................................. 21 3 20 0.05 1 1 0 0 0 0 0
...................................................................................................................................................................AAAAAAAGAACAGACCCAC.............................................................. 19 2 20 0.05 1 1 0 0 0 0 0
...............................................................................................................................................................CAGAAAAAAAACAAAACACC................................................................. 20 2 20 0.05 1 1 0 0 0 0 0
..................................................................................................................................................................AAAAAGAACAAAACACCCA............................................................... 19 2 20 0.05 1 1 0 0 0 0 0
..............................................................................................................................................................CCAAAAAAAGACCAACCCACC................................................................. 21 3 20 0.05 1 1 0 0 0 0 0
................................................................................................................................................................AAAAAAAAACTAACACACCCA............................................................... 21 2 20 0.05 1 1 0 0 0 0 0
..................................................................................................................................................................AAAAAACACAACCCTCCCACA............................................................. 21 3 20 0.05 1 1 0 0 0 0 0
...................................................................................................................................................................AAACAAACAAGACACCCAC.............................................................. 19 2 20 0.05 1 1 0 0 0 0 0
.................................................................................................................................................................AAAAAAAACCAACACCCCCA............................................................... 20 2 20 0.05 1 1 0 0 0 0 0
....................................................................................................................................................................AAAAAACAAGACCCCCAC.............................................................. 18 2 20 0.05 1 1 0 0 0 0 0
................................................................................................................................................................AAAACAAAAACAACCCTCCCA............................................................... 21 3 20 0.05 1 1 0 0 0 0 0
..................................................................................................................................................................AAAATAAACAACACACCCACCA............................................................ 22 3 20 0.05 1 1 0 0 0 0 0

Anti-sense strand reads

ATGTGGCAAACTCGCTGTCTGTTATGTACCTCGAGCTACCGGAAAAAGTCCATTCATCTTACTGGCATGAAGACTATGTTAAACCTACAAATGTAGAAACAACGTTGCCAAAAGAAAAGCGGGGCAGCGGTGAGGTGGGTGAGCTTTTTAAAAACCGGGGTTTTTTTTTTGTTGTGTGGGTGTATGCGTGCATCTGCTACCTGTACGGGTGGTCGGTGCTAAGCCTCTGCCTAGACCTCAGACT
***************************************************************.....((((......................))))........................************************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total V106
head
 M044
female body
 M058
embryo
 V105
male body		 V055
head
.......................................................................................................................CGGGGCAGCGGTGAGGTGGGTG....................................................................................................... 22 0 1 1.00 1 1 0 0 0 0
..........................................................................TATGTTAAAGCTTCAAATGT...................................................................................................................................................... 20 2 4 0.75 3 0 0 3 0 0
..........................................................................................................................................................................................................GTACGGGTGGTGGGTGTT........................ 18 2 20 0.50 10 1 7 0 2 0
.....................................................................................................................................................................................................TGCCGGTACGGGTGGTGGGTG.......................... 21 3 13 0.23 3 0 2 0 1 0
..........................................................................................................................................................................................................GTACGGGTGGTGGGTGTTA....................... 19 2 5 0.20 1 0 1 0 0 0
............................................................................................................................CAGCGGTGATGTGGGTGT...................................................................................................... 18 2 8 0.13 1 0 0 0 0 1
.......................................................................................................................................................................................................CCGGTACGGGTGGTGGGTG.......................... 19 2 10 0.10 1 0 1 0 0 0
...............................................................................................................................................................................................................................CCTCTGCCTGGACCTTAGA.. 19 2 15 0.07 1 1 0 0 0 0
.......................................................................................................................TGGGGCAGTGGTGAGGCGGG......................................................................................................... 20 3 19 0.05 1 0 0 0 0 1
....................................................................................................................................AGGTGGGTGAGAGTTTTAC............................................................................................. 19 3 20 0.05 1 0 0 1 0 0
.............................................................................................................................AACGGTGAGGTAGGTGAG..................................................................................................... 18 2 20 0.05 1 0 0 0 1 0
.......................................................................................................................................................................................................CCGGTACGGGTGGTGGGT........................... 18 2 20 0.05 1 0 1 0 0 0
................................................................................................................................................................................................................................CTCTGCTTAGACCTTAGA.. 18 2 20 0.05 1 1 0 0 0 0
.............................................................................................................................................................................GTGCGGGTGTATGCGTGG..................................................... 18 2 20 0.05 1 0 0 0 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droAna3 scaffold_13266:14591654-14591897 - dan_2016 TACACCGTTTGA---GCGACAGACAATACATGGAGCTCGATGGCCTTTTTCAGGTAAGTAGAATG---------ACCGT------ACTTCTG-A------------TACA--------------ATT-TGGATGTTTACATCTTTGT--------TGCAACGGT-TTTCTTTTCGCCCCGTCGC-------------------------------------------------------------CACTCCACCCA----CTCG-----A-AA----------------------AATTTTTGGCCCCAAAAA-AAAAACAACACAC----------C-----CAC------------------------ATAC---------------------------GCACGTAGACGATGGACATGCCCACCAGCCACGATTC------GGAGA-C--GGATCTGGAGTCTGA
droBip1 scf7180000396428:234997-235241 + TACACCGTTTGA---GCGACAGACAATACATGGAGCTCGATGGCCTTTTTCAGGTAAGTCGGGTG---------ACCAT------AGTTCTG-G------------TACA--------------ATT-TGGATGCTTACATCTCTGT--------TTGTACGG-TTTTCTTTTCGCCTCGTCGC-------------------------------------------------------------CACTCCACCCA----CTCG-----A-AA----------------------AATTTTTGGCCCCAAAAAAAAAAACAACACAC----------C-----CAC------------------------ATAC---------------------------GCACGTAGACGATGGACATGCCCACCAGCCACGATTC------GGAGA-C--GGATCTGGAGTCTGA
droKik1 scf7180000302411:241146-241416 + CACACCGTCTCA---CCGACAGCCAGTACATGGAGGTCGAGGGCCTACTGCAGGTGAGTGAGAAA---------ACCAC------A--TTCGCA------------GCCG--------------TTTTCGCATTGTCTGATGGCCGC--------TAACACGCCCTTTCTTTTCGCCCCGCCGCCCCGT-----------------CGCCAC---------------------------------CACTCCACCCA----CTCGACTTGA-AA----------------------AACC--TGGCC--------AAAAA-CACGCAC------ACAACCGCAT-----------TTGCA--------------TTCGCACTCGAA---T------------TCGCGCAGGCCATGGACATGCCCACCAGCCACGACCC------GGAGG-C--GGATCTCGAGCCGGA
droFic1 scf7180000453215:799127-799387 - AAATACGTCTCA---CCGAAAGCCAATACATGGAGGTCGAAGGCTTGCTGCAGGTAAGTGGAAGC---------ACAGC------A--TCCGCA------------AATT--------------GGTGCGAATAACCTGAAAGCTGC--------TACAACGCCCTTTCTTTTCGCCCCGTCGCACTACA---CACCACACTACAACACCAC-----------------------------TCCACACTCCACCCA----CTCG-----CGAA----------------------AATC--TGGCC--------AA-AACCACGCAC-------------------------------------------ACAC---------------------------ACGCACAGGCCATGGACATGCCCACCAGCCACGATCC------GGAGG-C--GGAACTGGAGTCGGA
droEle1 scf7180000491349:619056-619328 + CACACCGTCTCA---CCGACAGCCAGTACATGGAGGTCGAAGGCTTGCTGCAGGTAAGTGGATGC---------ACTGC------A--TCCTCC------------GACA--------------TTTCCGGATGGCCCACAGACAGC--------TACAACGCCCTTTCTTTTCGCCCCGTCGC--CATA---CACCA--------CACCACTCCGCACCACACCAC-------TCCGCACTCCACACTCCGCCCA----CTCG-----A-AA----------------------AACC--TGGCC--------AAAAACCACGCAC-------------------------------------------ACAC---------------------------TCGCACAGGCAATGGACATGCCCACCAGCCACGATCC------GGAGG-C--GGAACTGGAGTCGGA
droRho1 scf7180000779318:65832-66082 - CACACCGTCTCA---CCGACAGCCAGTACATGGAGGTCGAAGGCTTGTTGCAGGTAAGTGGATGC---------ACTGC------A--TCCTCA------------GATA--------------ATTCCGGATGGCCCAAACACTGC--------TACAACGCCCTTTCTTTTCGCCCCGTCGC--CACA---CACCA--------CACCACT-----------------------------CCGCACTCCACCCA----CTCG-----A-AA----------------------AACC--TGGCC--------AAAAACCACGCAC-------------------------------------------ACAC---------------------------TCGCGCAGGCCATGGACATGCCCACCAGCCACGATCC------GGAGG-C--GGAACTGGAGCCGGA
droBia1 scf7180000301754:2408427-2408709 + CACACCGTCTCACCACCGACAGCCAGTACATGGAGGTCGAGGGCTTGCTGCAGGTGAGTGTACGC---------ACTGC------G--TCCGGA------------GCAG--------------ATTCCGGTGGATCCACAGACGGC--------TAACACGCCCTTTCTTTTCGCCCCGTCGCTCGACACCGCACCG--------CACCACTC---------------CGCTCGCCAATCTCCACTCTCCGCCCA----CTCG-----A-AA----------------------AACC--TGGCC--------AAAAACCACGCAC-------------------------------------------ACACTCGCGC-----TCAC------------TCGCACAGGCCATGGACATGCCCACCAGCCACGATCC------GGAGG-C--GGAACTGGAGCCGGA
droTak1 scf7180000415272:90894-91142 - CACACCGTCTCACCACCGACAGCCAGTACATGGAGGTCGAAGGCTTGCTGCAGGTGAGTGGACGC---------ACTGC------G--TCTGCC------------TTCT--------------ATTCCGGTTAATCCGCAGACGGC--------TACAACGCCCTTTCTTTTCGCCCCGTCGC-------------------------------------------------------TCTCCACACTCCGCCCA----CCTG-----A-AA----------------------AACC--TGGCC--------AAAAACCACGCAA------ACACC-----CAC------------------------ATAT---------------------------CCACTTAGGCCATGGACATGCCCACCAGCCACGACCC------GGAGG-C--GGAACTGGAGCCGGA
droEug1 scf7180000409462:2595216-2595472 + CACACCGTCTCACCACCGACAGCCAGTACATGGAAGTCGAAGGCTTGCTGCAGGTGAGTGGACGC---------GCTAC------A--TTCGTG------------GATG--------------ATTCCTGCTAATCCA----CTTC--------TACAACGCCCTTTCTTTTTGCCCCGTCGCACCA-----CACCA--------CACCACT----------------------CCGCTCTCCACGCTCCACCCA----CTCG-----A-AA----------------------AACC--TGGCC--------AAAAACCATGCAC-------------------------------------------ATAC---------------------------TCGCACAGGCGATGGACATGCCCACCAGCCACGATCC------GGAGG-C--GGAATTGGAGCCGGA
dm3 chr2R:10244406-10244693 - CACACCGTCTCACCACCGACAGCCAGTACATGGAGGTCGAAGGCTTGCTGCAGGTAAGTGGATGC---------ACTGC------G--TCCGCA------------GATAAATGAATAGGTTTA----------ATCCAGTGGCTGC--------TGCAACGCCCTTTCTTTTCGCCCCGTCGCACCACA---CACGA--------CACCACTTTGCTCTTCG-CTCTCCACTCGCCGCTCGCCACACTCCACCCA----CTCG-----A-AA----------------------AACC--TGGCC--------AAAAACCACGCAC-------------------------------------------ACAC---------------------------ATGCACAGGCCATGGACATGCCCACCAGCCACGACCC------GGAGG-C--GGAACTGGAACCGGA
droSim2 2r:10953889-10954169 - dsi_27259 CACACCGTCTCACCACCGACAGCCAGTACATGGAAGTCGAAGGCTTGCTGCAGGTAAGTGGATGC---------ACTGC------G--TCCGAA------------GATGAATGAATCGGTTTA----------ATCCAGAGGCTGC--------TGCAACGCCCTTTCTTTTCGCCCCGTCGCACCACA---CACGA--------CACCACTTTGCTCTTCG-CTC-------TCCGCTCGCCACACTCCACCCA----CTCG-----A-AA----------------------AACC--TGGCC--------AAAAACCACGCAC-------------------------------------------ACAC---------------------------ATGCACAGGCCATGGACATGCCCACCAGCCACGACCC------GGAGG-C--GGAACTGGAACAGGA
droSec2 scaffold_1:7752307-7752587 - CACACCGTCTCACCACCGACAGCCAGTACATGGAAGTCGAAGGCTTGCTGCAGGTAAGTGGATGC---------ACTGC------G--TCCGCA------------GATGAATGAATCGGTTTA----------ATCCAGAGACTGC--------TGCAACGCCCTTTCTTTTCGCCCCGTCGCACCACA---CACGA--------CACCACTTTGCTCTTCG-CTC-------TCCGCTCGCCACACTCCACCCA----CTCG-----A-AA----------------------AACC--TGGCC--------AAAAACCACGCAC-------------------------------------------ACAC---------------------------ATGCACAGGCCATGGACATGCCCACCAGCCACGACCC------GGAGG-C--GGAACTGGAACAGGA
droYak3 2R:10182347-10182618 - CACACCGTCTCACCACCGACAGCCAGTACATGGAGGTCGAAGGCTTGCTGCAGGTAAGTGAATGC---------AATGC------G--TCCGCG------------AATGAATGAATCGTTTTA----------ATACAGAGGCTGC--------TACAACGCCCTTTCTTTTCGCCCCGTCGCACCA-----CACGA--------CACCACTC---------------CGCACACCGCTCGCCACACTCCACCCA----CTCG-----A-AA----------------------AACC--TGGCC--------AAAAACCACGCAC-------------------------------------------ACAC---------------------------ATGCACAGGCCATGGACATGCCCACCAGCCACGACCC------GGAGG-C--GGAACTAGAACCGGA
droEre2 scaffold_4845:15596338-15596609 + CACACCGTCTCACCACCGACAGCCAGTACATGGAGGTCGAAGGCTTGCTGCAGGTAATTGGATGC---------AATGC------G--TCCGCG------------AATGAATGAGTCGGTTTA----------ATCTAGAGGCTAC--------TACAACGCCCTTTCTTTTCGCCCCGTCGCACCA-----CACGA--------CACCACTC---------------CGCTCTCCGCTCGCCATACTCCACCCA----CTCG-----A-AA----------------------AACC--TGGCC--------AAAAACCACGCAC-------------------------------------------ACTA---------------------------ATGCACAGGCCATGGACATGCCCACCAGCCACGATCC------GGAGG-C--GGAACTGGAACCGGA
dp5 3:4431003-4431264 + CACACCGTCTGA---CGGAGAGCCAGTACATGGAGGTTGAGGGCTTGCTGCAGGTAAATAGTTTT----TACCACTTGCAACCGCT--ATAGCGGCTACGTTTTCTGTGT--------------GT------------TATGGTTGC--------TACAACGCCCTTACTTTTT-CCCCGTCGC--CGT---------------------------------------------------C----GTCTCCACCCA----CTCG-----C-AA----------------------AA--------------------------ACAC-------------------ACACATACAAACACAA----------------------ATTTCTGCCTGCCCACGGAAAGCAGGCTATGGACATGCCCAGTAGTCGGGAGCACGACCAGGAAATCGGAG------AAATCGA
droPer2 scaffold_2:4618735-4618996 + CACACCGTCTGA---CGGAGAGCCAGTACATGGAGGTTGAGGGCTTGCTGCAGGTAAATAGTTTT----TACCACTTGCAACCGCT--ATAGCGGCTACGTTTTCTGTGT--------------GT------------TATGGTTGC--------TACAACGCCCTTACTTTTT-CCCCGTCGC--CGT---------------------------------------------------C----GTCTCCACCCA----CTCG-----C-AA----------------------AA--------------------------ACAC-------------------ACACATACAAACACAA----------------------ATTTCTGCCTGCCCACGGAAAGCAGGCTATGGACATGCCCAGTAGTCGGGAGCACGACCAGGAAATCGGAG------AAATCGA
droVir3 scaffold_12875:13547328-13547621 - dvi_6710 TGCACCGTCTGA---CGGATCGTCATTACTCGGAAGTAGAGGGCTTGCTACAGGTATAAAAACATCTCCTACAGATTGC------A--TGCATG------------GCAA--------ATTTAA----------ATGTTTCAATTAT--------TACAACGCCCAAC--TTTTGCC-CGTTTT------------------------------------CGT-CTG-------CCCACTCACGCGAACGCACCCA----CTCT-----C-AAAACACCAACACACATA------TATA--TGCAC-------------------ATACCCATAAAAACACAC---ACACA------CACAAACATACACACACATACGC-----TTCTCG------------CCGCAGGCTATGGACATGCCGA---GCTCAGACCA------------CGAAGAAATCGAGTCGGA
droMoj3 scaffold_6496:7000570-7000849 - TGCACCGTCTGA---CGGATCGTCATTACTCGGAAGTGGAGGGCTTGCTACAGGTATACAAACATCATCTAAATATTGT------T--AGCATGCC------------AA--------AATTTA----------ATGTGTCAATTAT--------TACAACGCCCAAT-TTTTCGCCCGTTTTCTTCG----------------------------TCTGCTG-CTG-------CCCACTCACGCGAACGCACCCA----CTCT-----C-AAAACACCAACACA------------------------------T-------ACACACACATAAAAACACAT-----------TAACACAAATACACATACACGTAC-----------------------GTATGCAGGCTATGGACATGCCGA---GTTCCGACCA------------CGAAG------AAATTGA
droGri2 scaffold_15245:17682481-17682780 + TGCACCGTCTGA---CGGATCGTCAATATTCGGATGTGGAGGGCTTGTTGCAGGTAAGCGGCCATCTTCTATATATTGC------T--AATATGCC------------AA--------ATTCAA----------CTGTTTGAATTATAACAAATATGCAACTCTCAAC-GTTTT-CTTCATTTT------------------------------------TGT-CTG-------CCCACTCACGCGAACGCACCCACACACTCT-----C-AC-ACACTCGCACTCACATACGACA---------T--------ACAAATAATACAC-------------------ATACATACAAAAACAAACACACACACACCTGCGC-----TTTTCG------------CCGCAGGCCATGGATATGCCGA---GCTCAGACCA------------CGAAG------AAATTGA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droAna3
TACACCGTTTGA---GCGACAGACAATACATGGAGCTCGATGGCCTTTTTCAGGTAAGTAGAATG---------ACCGT------ACTTCTG-A------------TACA--------------ATT-TGGATGTTTACATCTTTGT--------TGCAACGGT-TTTCTTTTCGCCCCGTCGC-------------------------------------------------------------CACTCCACCCA----CTCG-----A-AA----------------------AATTTTTGGCCCCAAAAA-AAAAACAACACAC----------C-----CAC------------------------ATAC---------------------------GCACGTAGACGATGGACATGCCCACCAGCCACGATTC------GGAGA-C--GGATCTGGAGTCTGASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
................CGACAGACAATACATGGAGCTCGATGG.........................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000010
.........TGA---GCGACAGACAATACATGGAGC................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001010000
......................................................................................................................................................................................................................................................................................................................AAA-AAAAACAACACAC----------C-----CA...........................................................................................................................1911.001010000
........................AATACATGGAGCTCGATGGCC.......................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000001
..........................TACATGGAGCTCGATGGCCT......................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000001
.................................................................................................................................................................................CCGTCGC-------------------------------------------------------------CACTCCACCCA----CTC.............................................................................................................................................................................................................2111.001100000
....................................................................................................................................................................................................................................................................................................................AAAAA-AAAAACAACACAC----------C-----.............................................................................................................................1920.501010000
droBip1
TACACCGTTTGA---GCGACAGACAATACATGGAGCTCGATGGCCTTTTTCAGGTAAGTCGGGTG---------ACCAT------AGTTCTG-G------------TACA--------------ATT-TGGATGCTTACATCTCTGT--------TTGTACGG-TTTTCTTTTCGCCTCGTCGC-------------------------------------------------------------CACTCCACCCA----CTCG-----A-AA----------------------AATTTTTGGCCCCAAAAAAAAAAACAACACAC----------C-----CAC------------------------ATAC---------------------------GCACGTAGACGATGGACATGCCCACCAGCCACGATTC------GGAGA-C--GGATCTGGAGTCTGASizeHit CountTotal NormTotal
No Reads
droKik1
CACACCGTCTCA---CCGACAGCCAGTACATGGAGGTCGAGGGCCTACTGCAGGTGAGTGAGAAA---------ACCAC------A--TTCGCA------------GCCG--------------TTTTCGCATTGTCTGATGGCCGC--------TAACACGCCCTTTCTTTTCGCCCCGCCGCCCCGT-----------------CGCCAC---------------------------------CACTCCACCCA----CTCGACTTGA-AA----------------------AACC--TGGCC--------AAAAA-CACGCAC------ACAACCGCAT-----------TTGCA--------------TTCGCACTCGAA---T------------TCGCGCAGGCCATGGACATGCCCACCAGCCACGACCC------GGAGG-C--GGATCTCGAGCCGGASizeHit CountTotal NormTotal
No Reads
droFic1
AAATACGTCTCA---CCGAAAGCCAATACATGGAGGTCGAAGGCTTGCTGCAGGTAAGTGGAAGC---------ACAGC------A--TCCGCA------------AATT--------------GGTGCGAATAACCTGAAAGCTGC--------TACAACGCCCTTTCTTTTCGCCCCGTCGCACTACA---CACCACACTACAACACCAC-----------------------------TCCACACTCCACCCA----CTCG-----CGAA----------------------AATC--TGGCC--------AA-AACCACGCAC-------------------------------------------ACAC---------------------------ACGCACAGGCCATGGACATGCCCACCAGCCACGATCC------GGAGG-C--GGAACTGGAGTCGGASizeHit CountTotal NormTotal
No Reads
droEle1
CACACCGTCTCA---CCGACAGCCAGTACATGGAGGTCGAAGGCTTGCTGCAGGTAAGTGGATGC---------ACTGC------A--TCCTCC------------GACA--------------TTTCCGGATGGCCCACAGACAGC--------TACAACGCCCTTTCTTTTCGCCCCGTCGC--CATA---CACCA--------CACCACTCCGCACCACACCAC-------TCCGCACTCCACACTCCGCCCA----CTCG-----A-AA----------------------AACC--TGGCC--------AAAAACCACGCAC-------------------------------------------ACAC---------------------------TCGCACAGGCAATGGACATGCCCACCAGCCACGATCC------GGAGG-C--GGAACTGGAGTCGGASizeHit CountTotal NormTotal
No Reads
droRho1
CACACCGTCTCA---CCGACAGCCAGTACATGGAGGTCGAAGGCTTGTTGCAGGTAAGTGGATGC---------ACTGC------A--TCCTCA------------GATA--------------ATTCCGGATGGCCCAAACACTGC--------TACAACGCCCTTTCTTTTCGCCCCGTCGC--CACA---CACCA--------CACCACT-----------------------------CCGCACTCCACCCA----CTCG-----A-AA----------------------AACC--TGGCC--------AAAAACCACGCAC-------------------------------------------ACAC---------------------------TCGCGCAGGCCATGGACATGCCCACCAGCCACGATCC------GGAGG-C--GGAACTGGAGCCGGASizeHit CountTotal NormTotal
No Reads
droBia1
CACACCGTCTCACCACCGACAGCCAGTACATGGAGGTCGAGGGCTTGCTGCAGGTGAGTGTACGC---------ACTGC------G--TCCGGA------------GCAG--------------ATTCCGGTGGATCCACAGACGGC--------TAACACGCCCTTTCTTTTCGCCCCGTCGCTCGACACCGCACCG--------CACCACTC---------------CGCTCGCCAATCTCCACTCTCCGCCCA----CTCG-----A-AA----------------------AACC--TGGCC--------AAAAACCACGCAC-------------------------------------------ACACTCGCGC-----TCAC------------TCGCACAGGCCATGGACATGCCCACCAGCCACGATCC------GGAGG-C--GGAACTGGAGCCGGASizeHit CountTotal NormTotal
No Reads
droTak1
CACACCGTCTCACCACCGACAGCCAGTACATGGAGGTCGAAGGCTTGCTGCAGGTGAGTGGACGC---------ACTGC------G--TCTGCC------------TTCT--------------ATTCCGGTTAATCCGCAGACGGC--------TACAACGCCCTTTCTTTTCGCCCCGTCGC-------------------------------------------------------TCTCCACACTCCGCCCA----CCTG-----A-AA----------------------AACC--TGGCC--------AAAAACCACGCAA------ACACC-----CAC------------------------ATAT---------------------------CCACTTAGGCCATGGACATGCCCACCAGCCACGACCC------GGAGG-C--GGAACTGGAGCCGGASizeHit CountTotal NormTotal
No Reads
droEug1
CACACCGTCTCACCACCGACAGCCAGTACATGGAAGTCGAAGGCTTGCTGCAGGTGAGTGGACGC---------GCTAC------A--TTCGTG------------GATG--------------ATTCCTGCTAATCCA----CTTC--------TACAACGCCCTTTCTTTTTGCCCCGTCGCACCA-----CACCA--------CACCACT----------------------CCGCTCTCCACGCTCCACCCA----CTCG-----A-AA----------------------AACC--TGGCC--------AAAAACCATGCAC-------------------------------------------ATAC---------------------------TCGCACAGGCGATGGACATGCCCACCAGCCACGATCC------GGAGG-C--GGAATTGGAGCCGGASizeHit CountTotal NormTotal
No Reads
dm3
CACACCGTCTCACCACCGACAGCCAGTACATGGAGGTCGAAGGCTTGCTGCAGGTAAGTGGATGC---------ACTGC------G--TCCGCA------------GATAAATGAATAGGTTTA----------ATCCAGTGGCTGC--------TGCAACGCCCTTTCTTTTCGCCCCGTCGCACCACA---CACGA--------CACCACTTTGCTCTTCG-CTCTCCACTCGCCGCTCGCCACACTCCACCCA----CTCG-----A-AA----------------------AACC--TGGCC--------AAAAACCACGCAC-------------------------------------------ACAC---------------------------ATGCACAGGCCATGGACATGCCCACCAGCCACGACCC------GGAGG-C--GGAACTGGAACCGGASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
..........................TACATGGAGGTCGAAGGCTTGCTGCAG...............................................................................................................................................................................................................................................................................................................................................................................................................................2717.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000022010000010000000
..............................................GCTGCAGGTAAGTGGATG....................................................................................................................................................................................................................................................................................................................................................................................................................1816.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000010000000000000000000000000000000010000000000000000000100000000000000002000
............................CATGGAGGTCGAAGGCTTGCTGCAG...............................................................................................................................................................................................................................................................................................................................................................................................................................2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000
...........................ACATGGAGGTCGAAGGCTTGCTGC.................................................................................................................................................................................................................................................................................................................................................................................................................................2413.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................GTCGAAGGCTTGCTGCAG...............................................................................................................................................................................................................................................................................................................................................................................................................................1813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000100000010000000000000000000000000000000
.............................ATGGAGGTCGAAGGCTTGCTGC.................................................................................................................................................................................................................................................................................................................................................................................................................................2213.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................GTAAGTGGATGC---------ACTGC------G--TCCG........................................................................................................................................................................................................................................................................................................................................................................................2213.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000010000000000000000000000100
...........................ACATGGAGGTCGAAGGCTTGCTGCAG...............................................................................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000
........................AGTACATGGAGGTCGAAGGCTTGCTG..................................................................................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000
..............................TGGAGGTCGAAGGCTTGCTGCAG...............................................................................................................................................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000001000000000000000
..............................TGGAGGTCGAAGGCTTGCTGC.................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000100000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................GACCC------GGAGG-C--GGAACTGGAACCGGA2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................CATGGAGGTCGAAGGCTTG.....................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................AGGCTTGCTGCAGGTAAG..........................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................AAACCACGCAC-------------------------------------------ACAC---------------------------ATGCA..............................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................CGACCC------GGAGG-C--GGAACTGG.......2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................CCAGCCACGACCC------GGAGG-C--GGAAC..........2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.ACACCGTCTCACCACCGACAGCCAGTA........................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................ATGGAGGTCGAAGGCTTGCTGCA................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................TTCTTTTCGCCCCGTCGCACC.........................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................GGTCGAAGGCTTGCTGCAT...............................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................CTTGCTGCAGGTAAGTGGAT.....................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
..................................................................................................................................................................CCCTTTCTTTTCGCCCCGTCGCACCAC.......................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................GGAGGTCGAAGGCTTGCTGCAG...............................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000
...................................................................................................................................................................................................................................................................................................................................................................................CAC---------------------------ATGCACAGGCCATGGACATGCC.............................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................CCCGTCGCACCACA---CACGA--------......................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
.....................................................................................................................................................................TTTCTTTTCGCCCCGTCGCACCACA---...................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................CACGACCC------GGAGG-C--GGAACTGGAA.....2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................CAGTACATGGAGGTCGAAGGCTTGC....................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
..............................TGGAGGTCGAAGGCTTGCTGCAGG..............................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................AA----------------------AACC--TGGCC--------AAAAACC...................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCC------GGAGG-C--GGAACTGGAACC...2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................ACATGGAGGTCGAAGGCTTGCTGCA................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000
.......................CAGTACATGGAGGTCGAAGGCTTGCTG..................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000
............................................................................................................................................................................TCGCCCCGTCGCACCACA---CACGA--------CA....................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................A--------CACCACTTTGCTCTTCG-CTCTCCACT...........................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................CAGCCAGTACATGGAGGTC..............................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
........................AGTACATGGAGGTCGAAGGC........................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
.....................................................GTAAGTGGATGC---------ACTGC------G--TCCGCA------------..........................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................CACCAGCCACGACCC------GGAGG-C--GG.............2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
.......................CAGTACATGGAGGTCGAAGGCTT......................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................CTTTGCTCTTCG-CTCTCCACTCGC........................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................AGCCAGTACATGGAGGTCGAAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
...........................................CTTGCTGCAGGTAAGTGG.......................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................CGACCC------GGAGG-C--GGAACTGGAACCGG.2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................CA---CACGA--------CACCACTTTGCTCTTCG-CTC.................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................AGCCAGTACATGGAGGTCGA............................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................ACATGGAGGTCGAAGGCT.......................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
.........................GTACATGGAGGTCGAAGG.........................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
....................................TCGAAGGCTTGCTGCAGGTAAA..........................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................C--------TGCAACGCCCTTTCTTTTCG.....................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................GACAGCCAGTACATGGAGGTC..............................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................CAGCCAGTACATGGAGGTCGAAGGC........................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.ACACCGTCTCACCACCGACAGCCAGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................AACCACGCAC-------------------------------------------ACAC---------------------------ATGCACAA...........................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................CGA--------CACCACTTTGCTCTTC......................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
CACACCGTCTCACCACCGACAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000
..........................TACATGGAGGTCGAAGGCTTGCTGC.................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
....................................TCGAAGGCTTGCTGCAGGTAAGTG........................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................GGTAAGTGGATGC---------ACTGC------G--TC..........................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
.....................GCCAGTACATGGAGGTCGAAGGCTTGC....................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..................ACAGCCAGTACATGGAGGTCG.............................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000
...............................GGAGGTCGAAGGCTTGCTGCAGGCC............................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................GCCAGTACATGGAGGTCGAAGGC........................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................ACTTTGCTCTTCG-CTCTCCACTCGCC.......................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................GCTTGCTGCAGGTAAGTG........................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................CACTTTGCTCTTCG-CTCTCCACT...........................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................GCTTGCTGCAGGTAAGTGGATG....................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100
....................................TCGAAGGCTTGCTGCAG...............................................................................................................................................................................................................................................................................................................................................................................................................................1711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................ATGGAGGTCGAAGGCTTGCTGCAG...............................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................ACGCAC-------------------------------------------ACAC---------------------------ATGCACAGGCC........................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................GGTCGAAGGCTTGCTGCA................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................C------GGAGG-C--GGAACTGGAACC...1920.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................CTCCACTCGCCGCTCGC.................................................................................................................................................................................................................................1720.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................CGAAGGCTTGCTGCAGGCC............................................................................................................................................................................................................................................................................................................................................................................................................................1930.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................AACCACGCAC-------------------------------------------ACAC---------------------------ATGCAGC............................................................2160.1710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
droSim2
CACACCGTCTCACCACCGACAGCCAGTACATGGAAGTCGAAGGCTTGCTGCAGGTAAGTGGATGC---------ACTGC------G--TCCGAA------------GATGAATGAATCGGTTTA----------ATCCAGAGGCTGC--------TGCAACGCCCTTTCTTTTCGCCCCGTCGCACCACA---CACGA--------CACCACTTTGCTCTTCG-CTC-------TCCGCTCGCCACACTCCACCCA----CTCG-----A-AA----------------------AACC--TGGCC--------AAAAACCACGCAC-------------------------------------------ACAC---------------------------ATGCACAGGCCATGGACATGCCCACCAGCCACGACCC------GGAGG-C--GGAACTGGAACAGGASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
............................CATGGAAGTCGAAGGCTTGCTG..................................................................................................................................................................................................................................................................................................................................................................................................................................2212.00200000000000020000
...........................ACATGGAAGTCGAAGGCTTG.....................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00110000000000000000
..........................TACATGGAAGTCGAA...........................................................................................................................................................................................................................................................................................................................................................................................................................................1511.00100000000010000000
..............................TGGAAGTCGAAGGCT.......................................................................................................................................................................................................................................................................................................................................................................................................................................1511.00100000010000000000
...........................ACATGGAAGTCGAAC..........................................................................................................................................................................................................................................................................................................................................................................................................................................15110.09100000000010000000
droSec2
CACACCGTCTCACCACCGACAGCCAGTACATGGAAGTCGAAGGCTTGCTGCAGGTAAGTGGATGC---------ACTGC------G--TCCGCA------------GATGAATGAATCGGTTTA----------ATCCAGAGACTGC--------TGCAACGCCCTTTCTTTTCGCCCCGTCGCACCACA---CACGA--------CACCACTTTGCTCTTCG-CTC-------TCCGCTCGCCACACTCCACCCA----CTCG-----A-AA----------------------AACC--TGGCC--------AAAAACCACGCAC-------------------------------------------ACAC---------------------------ATGCACAGGCCATGGACATGCCCACCAGCCACGACCC------GGAGG-C--GGAACTGGAACAGGASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
........................................AGGCTTGCTGCAGGTAAGTGGATG....................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010100
........................................AGGCTTGCTGCAGGTAAG..........................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010010
......................................................................................................................................................................................................................TGCTCTTCG-CTC-------TCCGCTCGCCACA.............................................................................................................................................................................................................................2511.0010010
..........................................GCTTGCTGCAGGTAAGTG........................................................................................................................................................................................................................................................................................................................................................................................................................1811.0011000
....................................................................................................................................................................CTTTCTTTTCGCCCCGTCGCAC..........................................................................................................................................................................................................................................................................................2211.0010100
droYak3
CACACCGTCTCACCACCGACAGCCAGTACATGGAGGTCGAAGGCTTGCTGCAGGTAAGTGAATGC---------AATGC------G--TCCGCG------------AATGAATGAATCGTTTTA----------ATACAGAGGCTGC--------TACAACGCCCTTTCTTTTCGCCCCGTCGCACCA-----CACGA--------CACCACTC---------------CGCACACCGCTCGCCACACTCCACCCA----CTCG-----A-AA----------------------AACC--TGGCC--------AAAAACCACGCAC-------------------------------------------ACAC---------------------------ATGCACAGGCCATGGACATGCCCACCAGCCACGACCC------GGAGG-C--GGAACTAGAACCGGASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
No Reads
droEre2
CACACCGTCTCACCACCGACAGCCAGTACATGGAGGTCGAAGGCTTGCTGCAGGTAATTGGATGC---------AATGC------G--TCCGCG------------AATGAATGAGTCGGTTTA----------ATCTAGAGGCTAC--------TACAACGCCCTTTCTTTTCGCCCCGTCGCACCA-----CACGA--------CACCACTC---------------CGCTCTCCGCTCGCCATACTCCACCCA----CTCG-----A-AA----------------------AACC--TGGCC--------AAAAACCACGCAC-------------------------------------------ACTA---------------------------ATGCACAGGCCATGGACATGCCCACCAGCCACGATCC------GGAGG-C--GGAACTGGAACCGGASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
........................AGTACATGGAGGTCGAAGGC........................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000
.............CACCGACAGCCAGTACATGGAGGT...............................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000001
...................................................AGGTAATTGGATGC---------AATG......................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000010
dp5
CACACCGTCTGA---CGGAGAGCCAGTACATGGAGGTTGAGGGCTTGCTGCAGGTAAATAGTTTT----TACCACTTGCAACCGCT--ATAGCGGCTACGTTTTCTGTGT--------------GT------------TATGGTTGC--------TACAACGCCCTTACTTTTT-CCCCGTCGC--CGT---------------------------------------------------C----GTCTCCACCCA----CTCG-----C-AA----------------------AA--------------------------ACAC-------------------ACACATACAAACACAA----------------------ATTTCTGCCTGCCCACGGAAAGCAGGCTATGGACATGCCCAGTAGTCGGGAGCACGACCAGGAAATCGGAG------AAATCGASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
..........................TACATGGAGGTTGAGGGCTTGC....................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100000000
..................................GGTTGAGGGCTTGCTGCAG...............................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000001
...ACCGTCTGA---CGGAGAGCCAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
...................................GTTGAGGGCTTGCTGCAGGCT............................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000001000
droPer2
CACACCGTCTGA---CGGAGAGCCAGTACATGGAGGTTGAGGGCTTGCTGCAGGTAAATAGTTTT----TACCACTTGCAACCGCT--ATAGCGGCTACGTTTTCTGTGT--------------GT------------TATGGTTGC--------TACAACGCCCTTACTTTTT-CCCCGTCGC--CGT---------------------------------------------------C----GTCTCCACCCA----CTCG-----C-AA----------------------AA--------------------------ACAC-------------------ACACATACAAACACAA----------------------ATTTCTGCCTGCCCACGGAAAGCAGGCTATGGACATGCCCAGTAGTCGGGAGCACGACCAGGAAATCGGAG------AAATCGASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
........................AGTACATGGAGGTTGAGGGCTTGCTGC.................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001100000
droVir3
TGCACCGTCTGA---CGGATCGTCATTACTCGGAAGTAGAGGGCTTGCTACAGGTATAAAAACATCTCCTACAGATTGC------A--TGCATG------------GCAA--------ATTTAA----------ATGTTTCAATTAT--------TACAACGCCCAAC--TTTTGCC-CGTTTT------------------------------------CGT-CTG-------CCCACTCACGCGAACGCACCCA----CTCT-----C-AAAACACCAACACACATA------TATA--TGCAC-------------------ATACCCATAAAAACACAC---ACACA------CACAAACATACACACACATACGC-----TTCTCG------------CCGCAGGCTATGGACATGCCGA---GCTCAGACCA------------CGAAGAAATCGAGTCGGASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
...........................ACTCGGAAGTAGAGGGCT.......................................................................................................................................................................................................................................................................................................................................................................................................................................1812.002010000000000000000000000000000000000000000000000000000100000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................CATGCCGA---GCTCAGACCA------------CGA...............2112.002001000000000000000000010000000000000000000000000000000000000000
........................ATTACTCGGAAGTAGAGGGCT.......................................................................................................................................................................................................................................................................................................................................................................................................................................2112.002020000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................TAT--------TACAACGCCCAAC--TTTTG.....................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000010000000000000000000000000000000
..CACCGTCTGA---CGGATCGTCATTA........................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001100000000000000000000000000000000000000000000000000000000000000
..........................TACTCGGAAGTAGAGGGCT.......................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001010000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................C--TTTTGCC-CGTTTT------------------------------------CGT-CTG-------C.........................................................................................................................................................................................................................................2111.001000000000000000000000000001000000000000000000000000000000000000
.........................................................AAAAACATCTCCTACAGATTGC------A--T...........................................................................................................................................................................................................................................................................................................................................................................................2411.001000000000000000000000000000000010000000000000000000000000000000
........................ATTACTCGGAAGTAGAGGGCTTGCTA..................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000000000000000000000000000000000000000000000000000000000000010
...........................................................................................................................................................................TTTGCC-CGTTTT------------------------------------CGT-CTG-------..........................................................................................................................................................................................................................................1811.001010000000000000000000000000000000000000000000000000000000000000
.......TCTGA---CGGATCGTCATTACT......................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001010000000000000000000000000000000000000000000000000000000000000
.........................TTACTCGGAAGTAGAGGGCTTG.....................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000000000000010000000000000000000000000000000000000
...........................ACTCGGAAGTAGAGGGCC.......................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001010000000000000000000000000000000000000000000000000000000000000
TGCACCGTCTGA---CGGATCGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000001000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................CGC-----TTCTCG------------CCGCAGGCTATG.....................................................2111.001000000000000000000000000000100000000000000000000000000000000000
......................................................................ACAGATTGC------A--TGCATG------------GTT.......................................................................................................................................................................................................................................................................................................................................................................1930.331000000000000000000000000000000100000000000000000000000000000000
droMoj3
TGCACCGTCTGA---CGGATCGTCATTACTCGGAAGTGGAGGGCTTGCTACAGGTATACAAACATCATCTAAATATTGT------T--AGCATGCC------------AA--------AATTTA----------ATGTGTCAATTAT--------TACAACGCCCAAT-TTTTCGCCCGTTTTCTTCG----------------------------TCTGCTG-CTG-------CCCACTCACGCGAACGCACCCA----CTCT-----C-AAAACACCAACACA------------------------------T-------ACACACACATAAAAACACAT-----------TAACACAAATACACATACACGTAC-----------------------GTATGCAGGCTATGGACATGCCGA---GTTCCGACCA------------CGAAG------AAATTGASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
........................ATTACTCGGAAGTGGAGGGC........................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000001
droGri2
TGCACCGTCTGA---CGGATCGTCAATATTCGGATGTGGAGGGCTTGTTGCAGGTAAGCGGCCATCTTCTATATATTGC------T--AATATGCC------------AA--------ATTCAA----------CTGTTTGAATTATAACAAATATGCAACTCTCAAC-GTTTT-CTTCATTTT------------------------------------TGT-CTG-------CCCACTCACGCGAACGCACCCACACACTCT-----C-AC-ACACTCGCACTCACATACGACA---------T--------ACAAATAATACAC-------------------ATACATACAAAAACAAACACACACACACCTGCGC-----TTTTCG------------CCGCAGGCCATGGATATGCCGA---GCTCAGACCA------------CGAAG------AAATTGASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
................................GATGTGGAGGGCTTGTTGCAGGCC............................................................................................................................................................................................................................................................................................................................................................................................................................2411.00110

Generated: 05/18/2015 at 03:29 AM