ID:

dan_1981

 Coordinate:

scaffold_13266:13460667-13460817 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

Flybase annnotation

exon [dana_GLEANR_11506:1]; CDS [Dana\GF11449-cds]; intron [Dana\GF11449-in]

No Repeatable elements found

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
ATGTGGAGGTCCAGAACGGCAAGGTCACCGCCTGCTACGACAGCATCAAGGTCAGTATTCCCCAAAAAAAAAAAAAAAAAAGAGCATCCAATCCTCTATTGCTTCGTGTGACTCGTAGACCGTAAGCTTCCAGTCTTTTGATTTCTCATCCCACAATATATTATATAATCCTCTGATAATACCAAGTACCAACTCCCCCCGCCCCCAACCACCAACCAACCTAGGGCCTCAACGAAAACTGATCTTGTCTC
**************************************************(((((.........................((((.........))))...((((((.((.........)))).))))....((((....)))).............................)))))........................************************************************** 		Read size # Mismatch Hit Count Total Norm Total M044
female body
 V106
head
 M058
embryo
 V105
male body		 V055
head
 V039
embryo
.TGTGGAGGTCCAGAACGGC....................................................................................................................................................................................................................................... 19 0 1 3.00 3 1 2 0 0 0 0
.......GGTCCAGAACGGCAAGGTCAC............................................................................................................................................................................................................................... 21 0 1 3.00 3 0 3 0 0 0 0
....GGAGGTCCAGAACGGCAAGGTCACC.............................................................................................................................................................................................................................. 25 0 1 2.00 2 1 0 0 1 0 0
.......GGTCCAGAACGGCAAGGTCACC.............................................................................................................................................................................................................................. 22 0 1 2.00 2 0 1 0 1 0 0
.TGTGGAGGTCCAGAACGGCAAGGTCAC............................................................................................................................................................................................................................... 27 0 1 1.00 1 0 1 0 0 0 0
.TGTGGAGGTCCAGAACGG........................................................................................................................................................................................................................................ 18 0 1 1.00 1 1 0 0 0 0 0
.TGTGGAGGTCCAGAACGGCA...................................................................................................................................................................................................................................... 20 0 1 1.00 1 0 1 0 0 0 0
ATGTGGAGGTCCAGAACGGCAAGGT.................................................................................................................................................................................................................................. 25 0 1 1.00 1 0 0 0 1 0 0
.....................AGGTCACCGCCTGCTACGACAGCA.............................................................................................................................................................................................................. 24 0 1 1.00 1 0 1 0 0 0 0
....................AAGGTCACCGCCTGCTACGACAGCATC............................................................................................................................................................................................................ 27 0 1 1.00 1 0 1 0 0 0 0
......AGGTCCAGAACGGCAAGGT.................................................................................................................................................................................................................................. 19 0 1 1.00 1 0 1 0 0 0 0
..........CCAGAACGGCAAGGTCACCGCCT.......................................................................................................................................................................................................................... 23 0 1 1.00 1 0 1 0 0 0 0
.............................GCCTGCTACGACAGCATCAA.......................................................................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0
..GTGGAGGTCCAGAACGGCAAGGTCACC.............................................................................................................................................................................................................................. 27 0 1 1.00 1 1 0 0 0 0 0
.......GGTCCAGAACGGCAAGGT.................................................................................................................................................................................................................................. 18 0 1 1.00 1 0 1 0 0 0 0
...............ACGGCAAGGTCACCGCCTGCTACGACAG................................................................................................................................................................................................................ 28 0 1 1.00 1 1 0 0 0 0 0
....GGAGGTCCAGAACGGCAAGGTCACCG............................................................................................................................................................................................................................. 26 0 1 1.00 1 1 0 0 0 0 0
..GTGGAGGTCCAGAACGGCA...................................................................................................................................................................................................................................... 19 0 1 1.00 1 0 1 0 0 0 0
...................CAAGGTCACCGCCTGCTACGACA................................................................................................................................................................................................................. 23 0 1 1.00 1 1 0 0 0 0 0
.TGCGGAGGTCCAGAACGGC....................................................................................................................................................................................................................................... 19 1 1 1.00 1 0 0 1 0 0 0
..GTGGAAGTCCAGAACGGCAAGGT.................................................................................................................................................................................................................................. 23 1 1 1.00 1 1 0 0 0 0 0
..........CCAGAACGGCAAGGTCACCGC............................................................................................................................................................................................................................ 21 0 1 1.00 1 0 0 1 0 0 0
ATGTGGAGGTCCAGAACGGC....................................................................................................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0
.....GAGGTCCAGAACGGCAAGGTCACCGCC........................................................................................................................................................................................................................... 27 0 1 1.00 1 0 1 0 0 0 0
....GGAGGTCCAGAACGGCAAGGTCACCGC............................................................................................................................................................................................................................ 27 0 1 1.00 1 1 0 0 0 0 0
........GGCCAGAACGGCAAGGTCACC.............................................................................................................................................................................................................................. 21 1 1 1.00 1 0 0 1 0 0 0
...........................CCGCCTGCTACGACAGCATC............................................................................................................................................................................................................ 20 0 1 1.00 1 0 0 1 0 0 0
.....................................................ACTATTCCCGAAAAAAAAAAAAAAA............................................................................................................................................................................. 25 2 1 1.00 1 0 0 1 0 0 0
....GGAGGTCCATAACGTCAAGGT.................................................................................................................................................................................................................................. 21 2 1 1.00 1 0 0 0 1 0 0
........GTCCAGAACGGCAAGGTCACC.............................................................................................................................................................................................................................. 21 0 1 1.00 1 1 0 0 0 0 0
.............GAACGGCAAGGTCACCGCCT.......................................................................................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0
ATGTGGAGGTCCAGAGCGGCAAG.................................................................................................................................................................................................................................... 23 1 1 1.00 1 0 1 0 0 0 0
....................AAGGTCACCGCCTGCTACGACAG................................................................................................................................................................................................................ 23 0 1 1.00 1 1 0 0 0 0 0
.........................CACCGCCTGCTACGACAGC............................................................................................................................................................................................................... 19 0 1 1.00 1 0 0 1 0 0 0
.......................................................TATTCCCGAAAAAAAAAAAAAAAAAA.......................................................................................................................................................................... 26 1 1 1.00 1 0 0 1 0 0 0
...................CAAGGTCACCGCCTGCTACGACAGC............................................................................................................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0 0
.............GAACGGCAAGGTCACCGCCTG......................................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0
..............................CCTGCTACGACAGCATCAAGATA...................................................................................................................................................................................................... 23 2 1 1.00 1 0 1 0 0 0 0
..................GCAAGGTCACCGCCTGCTACGACAGC............................................................................................................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0
.................GGCAAGGTCACCGCCTGCTACGAC.................................................................................................................................................................................................................. 24 0 1 1.00 1 0 0 1 0 0 0
....................AAGGTCACCGCCTGCTACGACAGC............................................................................................................................................................................................................... 24 0 1 1.00 1 1 0 0 0 0 0
.......................................................................................................................................................................................AAGTACCAACTCTCCCCAC................................................. 19 2 2 0.50 1 0 0 1 0 0 0
.............................................................................................................................................................................................................CACCCACAAACCAACCTAAGG......................... 21 3 4 0.25 1 1 0 0 0 0 0
....................................................................................................................................GAATTTTGATTTCTCGTCCCA.................................................................................................. 21 3 5 0.20 1 1 0 0 0 0 0
.......................................................TATTCCCGAAAGTAAAAAAAAAAAA........................................................................................................................................................................... 25 3 6 0.17 1 0 0 1 0 0 0
............................................................................................................TGAATCCTAGACCGTAAGG............................................................................................................................ 19 3 10 0.10 1 0 1 0 0 0 0
..................................................................AAAAAAGAAAAAAAAGAGCA..................................................................................................................................................................... 20 1 10 0.10 1 0 0 1 0 0 0
......................................................................................................................................................................................................................................AACGAAAACGGACCTTGTG.. 19 3 11 0.09 1 0 0 0 0 1 0
.......................................................................AAAAAAAAACTAGCATCCAA................................................................................................................................................................ 20 2 13 0.08 1 0 0 1 0 0 0
........................................................ATTCCGCAAATAGAAAAAAAAAAAA.......................................................................................................................................................................... 25 3 17 0.06 1 0 0 1 0 0 0
................................................................AACAAAAAAAAGAAAAAGACCATC................................................................................................................................................................... 24 3 18 0.06 1 0 0 1 0 0 0
..........................................................................................................................................................................................................CTCCAGCCACCATCCAACCTA............................ 21 3 18 0.06 1 0 0 0 0 0 1
..............................................................CAAAAAAAAGAAAAAAAAAGACC...................................................................................................................................................................... 23 2 19 0.05 1 0 0 1 0 0 0
.......................................................TATTCCCGAAAATAAAAAAAAA.............................................................................................................................................................................. 22 2 19 0.05 1 0 0 1 0 0 0
..................................................................AAAAAAAACAAAAAAGAGC...................................................................................................................................................................... 19 1 20 0.05 1 0 0 1 0 0 0
.................................................................AAAAAAAAACAAAAAAGAGC...................................................................................................................................................................... 20 1 20 0.05 1 0 0 1 0 0 0

Anti-sense strand reads

TACACCTCCAGGTCTTGCCGTTCCAGTGGCGGACGATGCTGTCGTAGTTCCAGTCATAAGGGGTTTTTTTTTTTTTTTTTTCTCGTAGGTTAGGAGATAACGAAGCACACTGAGCATCTGGCATTCGAAGGTCAGAAAACTAAAGAGTAGGGTGTTATATAATATATTAGGAGACTATTATGGTTCATGGTTGAGGGGGGCGGGGGTTGGTGGTTGGTTGGATCCCGGAGTTGCTTTTGACTAGAACAGAG
**************************************************(((((.........................((((.........))))...((((((.((.........)))).))))....((((....)))).............................)))))........................************************************************** 		Read size # Mismatch Hit Count Total Norm Total V106
head
 V055
head
 V105
male body		 M058
embryo
 V039
embryo
 M044
female body
..........................................................................................................................................................TTATAAAATATATTTGGAGA............................................................................. 20 2 12 12.83 154 115 0 19 17 0 3
...........................................................................................................................................................................................TGGTGGAGGGGGGCGGCGGT............................................ 20 2 1 1.00 1 0 1 0 0 0 0
..............................................................................CTTCTCTTAGGTTAGGAGATA........................................................................................................................................................ 21 2 1 1.00 1 0 1 0 0 0 0
..............................................................................................................................................................................................TAGAGGGGGGCGGGGGTT........................................... 18 1 1 1.00 1 0 1 0 0 0 0
.........................................................................................................................................................GTTATAAAATATATTTGGAGA............................................................................. 21 2 3 0.67 2 1 0 1 0 0 0
..........................................................................................................................................................TTATAAAATATATTTGGAG.............................................................................. 19 2 20 0.55 11 7 0 1 2 0 1
..........................................................................................................................................................................................................GGGGTGGGTGGTTGGTTG............................... 18 1 6 0.50 3 3 0 0 0 0 0
..........................................................................................................................................................TTATAAAATATATTAGGAGAAC........................................................................... 22 3 10 0.40 4 0 0 0 4 0 0
...........................................................................................................................................ATAAAGAGTAGGGTGTTCTA............................................................................................ 20 2 3 0.33 1 0 0 0 0 1 0
...........................................................................................................................................................................................TGGTCGAGGGGGGCGGGGAT............................................ 20 2 3 0.33 1 0 1 0 0 0 0
..................................................................................................................................................................................................................TGGTTCGTTGGATGACGGAGT.................... 21 3 4 0.25 1 0 1 0 0 0 0
...........................................................................................................................................................................................TGGTCGAGGGGGGCGGCGGT............................................ 20 2 4 0.25 1 0 1 0 0 0 0
..........................................................................................................................................................TTATAAAATATATTTGGAGACC........................................................................... 22 3 12 0.25 3 0 0 3 0 0 0
........................................................................................................................................................................................................CCGGGGTTGGTGGTGGGTT................................ 19 2 10 0.20 2 2 0 0 0 0 0
..................................................................................................................................................................................................................TGGTAGGTTGGATGCTGGAGT.................... 21 3 5 0.20 1 0 1 0 0 0 0
..................................................................................................................................................................................................GGGGGGCGCGAGTTGGTG....................................... 18 2 7 0.14 1 0 0 0 0 0 1
..................................................................................................................................................................................................................TGGTTTGTTGGATGCTGGAGT.................... 21 3 8 0.13 1 0 1 0 0 0 0
..........................................................................................................................................................TTATAAAATATATTTGGAGACA........................................................................... 22 3 8 0.13 1 0 0 1 0 0 0
..........................................................................................................................................................................................................GGGGTTGGTGGTTGGGTG............................... 18 1 8 0.13 1 1 0 0 0 0 0
......................................................................................................................................................................................GTTCCTGGTTGGCGGGGGCGG................................................ 21 3 9 0.11 1 0 0 0 0 1 0
...................................................................................................................................................................................................................................GAGTTGCCTGTGACTAAAAC.... 20 3 11 0.09 1 0 0 1 0 0 0
...........................................................................................................................................................................................TGGTTGTGCGGGGCAGGGGT............................................ 20 3 14 0.07 1 0 1 0 0 0 0
..............................................................................................................................................................ATAATATGATAGGAGACT........................................................................... 18 2 15 0.07 1 0 0 0 1 0 0
...................................................................................................................................................................................................................GGTTGGTTGGATCAAGGGGT.................... 20 3 16 0.06 1 0 1 0 0 0 0
...........................................................................................................................................................................................TGGTGGGGGGGGGCGGGGGT............................................ 20 2 17 0.06 1 0 1 0 0 0 0
..............................................................................................................................................................................................TGGAGGGGGGCTGGGGTTGT......................................... 20 3 19 0.05 1 0 1 0 0 0 0
......................................................................................................................................................................................................GGCGGGGGTGGCTGGTTG................................... 18 2 20 0.05 1 0 0 1 0 0 0
.........................................................................................................................................................................................................TGGGGTGGGTGGTTGGTTG............................... 19 2 20 0.05 1 1 0 0 0 0 0
...............................................................................................................................................................................................TGAGGGGGACGGGGGTTC.......................................... 18 2 20 0.05 1 0 1 0 0 0 0
.............................................................................................................................CGAAGGCCAGAAAACCAAAAA......................................................................................................... 21 3 20 0.05 1 0 0 0 1 0 0
...........................................................................................................................................................TATAAAATATATTTGGAGA............................................................................. 19 2 20 0.05 1 1 0 0 0 0 0
..........................................................................................................................................................TTATAGAATATATTTGGAGAA............................................................................ 21 3 20 0.05 1 0 0 1 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droAna3 scaffold_13266:13460617-13460867 - dan_1981 ATGTGGAGGTCCAGAACGGCAAGGTCACCGCCTGCTACGACAGCATCAAGGTCAGTATTCC-CC--A------------------------------------------A--AAA-----------AAAAAAAAAAAAA--------------------------------------------------------------------------------------------GAG-------------------------CATC---------------------------------------------------------------------C------------------------------------A-ATCCTCTATTGCTT--C---GT--GTGACTCGTAGACCGTAAG---CTTCCAGTCTTTTGATTTCTCATCCCAC---------------------------------AATA-----------------------------------TATT--AT-----AT--AATCCTCTGATAATACCAAGTACCAACTCCC-CCCGCCC-----------------------CCAACCACCA----AC------------------------------------------------------------------------------CAA-CCTAGGGCCTC--------------A----ACGA--AAACTGATCTTGTCTC-
droBip1 scf7180000396759:2676570-2676834 + ATGTGGAGGTCCAGAACGGCAAGGTCACCGCCTGCTACGACAGCATCAAGGTCAGTATTCC-CC--A------------------------------------------A--AAAATAGACCCAAAAATAAA------AGA---CC-----------------------------------------------------------------------------------------CAAC---------------------AC-------------------TCCC---------CCAA---AA----ACCA----------CAC--------C------------------------------------A-ATCCTCTATTGCTT--C---GT--GTGACTTGTAGACCGTAAG---CTTCCAGTCTTTTGATTTCTCATCCCAC---------------------------------AATA-----------------------------------TATT--AT-----AT--AATCCTAAGATAAAACC-AGTACCAACTCCCCCCCGCCT--------------------------------------------------------------------------------------------------------------------CCGA-ATTAGGGCCTC--------------G----ACGA--AAACTGATCTTGTCTC-
droKik1 scf7180000302476:3048521-3048766 - ACGTGGAGGTGCAGAACGGCAAGGTCACCGCTTGTTACGACAGCATCAAGGTCAGTATTCC-CC--------------------------------CCCC-A----AACCTA-------------------A----GCCCC---TCAC-----------------------------------------------------------------------------------GAAA---------------------------A----------------------------------T---AAAACCACCC---CTACT-------------C------------------------------------CC-CCCTCTATTGCTT--C---GT--GTGACTCGTAGACCGTAAG---CTTCAAGTCTTTTAATTTCTCATCCCAC---------------------------------AAAAAAA-----------------------------------T--GA-----ATAAG-------------------------------------------------------------------------------------------------------------AACA--------------------AATCCAAAATACCA-AAAC-CCCGATTTTAGGGCCTC--------------A----ACGA--AAACTGATCTTGTCTC-
droFic1 scf7180000453948:2287301-2287556 - ACGTGGAGGTCCAGAACGGCAAGGTCACCGCCTGTTACGACAGCATCAAGGTCAGTATCCC-CC--------------------------------------------GATA-------------------A------CGA---ACTA-----------------------------------------------------------------------------------GAC-----------------------------------------------TCCCTCGAATCCCCCAA---AA----ACCC----------CTC-CCC----C------------------------------------CAA-TCTCTATCGCTT--C---GT--GTGACTCGTAGACCGTAAG---CTT-ACGACTTATGATTTCTCATCCCAC---------------------------------AAAAACAAGAAAAAAA-A------------------AT---ATATATATATG---------------------------------------------------------------------------------------------------------A-------------------------------TAATCC--AATACCG-AT-T-CCCGA-TCCAGGGCCTC--------------G----ACGA--AAACTGATCTTGTCTC-
droEle1 scf7180000491214:1150754-1150997 - ATGTGGAGGTCCAGAACGGCAAGGTCACCGCCTGCTACGACAGCATCAAGGTCAGTATCCC-CT--A----------------------------------------AGC----A-----------AACAAA------CGA---ACTA-----------------------------------------------------------------------------------AAC-----------------------------------------------TCCT---------CCAACCGAA----ACTC----------CTA--------C------------------------------------CC-CCTTCTATTGCTT--C---GT--GTGACTCGTAGTTTGTAAG---CTTTAAGACTTATGATTTCTCATCCCAC---------------------------------CAAAAAAA----------------------------------T--AT--------------------------------------------------------------------------------------------------------------------------------------GATTATGATAAGCA--ACTACCG-AA-ACCCCAATTTTAGGGCCTC--------------A----GCGA--AAACTGATCTTGTCTC-
droRho1 scf7180000780084:145883-146128 - ACGTGGAGGTCCAGAACGGCAAGGTCACCGCCTGCTACGACAGCATCAAGGTCAGTATTCC-CC--------------------------------TCCCCC----CAGC---------------------A----AACGA---ACTA-----------------------------------------------------------------------------------GACTCCCC--------------------AATCTC-------------------------------------------------------------------C------------------------------------CC-CCCTCTATTGCTT--C---GT--GTGACTCGTAGAATGTAAG---CTTTAAGATTTATGATTTCTCATCCCAC---------------------------------AAAAAAAACCAAAAAA-A------ACAAA------------------ATATG---------------------------------------------------------------------------------------------------------A-------------------------------TAAGCC--AATACCG-AA-TCCCCAATTTTAGGGCCTC--------------A----ACGA--AAACTGATCTTGTCTC-
droBia1 scf7180000301754:5412059-5412271 + ACGTGGAGGTCCAGAACGGCAAGGTCACCGCCTGCTACGACAGCATCAAGGTCAGTACCCC-A---------------------------------------------G----------------------A----ATCGA---ACCA-----------------------------------------------------------------------------------GAGC---C--------------------CACC---------------------------------------------------------------------C------------------------------------A-ACCCCCTATTGCTT--C---GT--GTGACTCGTAGA-CGTAAG---CCT-AGGACTCTTTATTTCTCATCCCAC---------------------------------CAAA-----------------------------------TACT--AT--TCGATA--------------------------------------------------------------------------------------------------------------------------------------CGATCC--AAT-CCG-AA-C-CCCG--TCCAGGGCCTC--------------G----ACGA--AAACTGATCTTGTCTC-
droTak1 scf7180000415345:219507-219747 + ACGTGGAGGTCCAGAACGGCAAGGTCACCGCCTGCTACGACAGCATCAAGGTCAGTATCA----------------------------------------------------------------------------ACCTA---ACTA-----------------------------------------------------------------------------------GTACC--C---------------------------AACCACCCACTCAACTCC---------------CGAA----T-----------------------CT------------------------------------CC-CCCTCTATTGCTT--C---GTGTGTGACTCGTAGACTGTAAG---CTTTAAGACTTATGATTTCTCATCCCAA---------------------------------AAAA-----------------------------------AA-T--CT-----TTATGATC-------------------------------------------------------------------------------------------------T-------------------------------TAAACC--AATACCGAAAACCCCCAT-TTTAGGGCCTC--------------A----ACGA--AAACTGATCTTGTCTC-
droEug1 scf7180000409672:1958184-1958445 - ACGTGGAGGTCCAGAACGGCAAGGTCACCGCCTGCTACGACAGCATCAAGGTCAGTATTCC-TTCTAACGAGAAAAACAGAA----AATCCCTCTACCCC-CTA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGAAATCCTTAAAAAAA----AATC----------CTA-CCA----C------------------------------------CA-CCTTCTATTGCTT--C---GT--GTGACTTGTAGACCGTAAG---CTTTAAGTCTTATAATTTTTCATCCCAC---------------------------------AAAAAAAGAAAGA---AA-------CGA------------------------AAAA-----------------------------------------------------------------------------------------------------------------------------GATAATGAT----------------A-TCCCCAA-ATTAGGGCCTC--------------A----GCGA--AAACTGATCTTGTCTC-
dm3 chr2R:13163519-13163790 + ACGTGGAGGTCCAGAACGGCAAGGTCACCGCCTGCTACGACAGCATCAAGGTCAGTACTCC-C--------------------------------ATACC-C----TTGTTA-------------------A----ACCGA---ACTA-----------------------------------------------------------------------------------GAAACACC--------------------TACCCTCAACCA---------------------------------------C----------CAA--------C------------------------------------TC-CCCTCTATTGCTT--C---GT--GTGACTCGTAGACCGTAAG---CTTTAAGTCT--TGATTTCTCATCCCAC---------------------------------AAAAAAAAAGAAA---AAATAA--AATAAACAAGAAATA--ATATACATATT---------------------------------------------------------------------------------------------------------T-------------------------------CAAACC--AATACCG-AA-TCCCCAA-TTAAGGGCCTC--------------A----GCGA--AAACTGATCTTGTCTC-
droSim2 2r:13816179-13816442 + dsi_16042 ACGTGGAGGTCCAGAACGGCAAGGTCACCGCCTGCTACGACAGCATCAAGGTCAGTACTCC-C--------------------------------ACCCC-C----ATGTTA-------------------A----ACCGT---ACTA-----------------------------------------------------------------------------------GAAACACC--------------------TACCCT-------------------------------------------------------------------C------------------------------------A-ACCCTCTATTGCTT--C---GT--GTGACTCGTAGACCGTAAG---CTTTAAGTCT--TGATTTCTCATCCCAC---------------------------------AAAAAGAAAAAAA----AATAATAAAAAAATATGAAATA--ATATACATATT---------------------------------------------------------------------------------------------------------T-------------------------------CAAACC--AATACCA-AAATCCCCAA-TTAAGGGCCTC--------------A----GCGA--AAACTGATCTTGTCTC-
droSec2 scaffold_1:10665279-10665543 + ACGTGGAGGTCCAGAACGGCAAGGTCACCGCCTGCTACGACAGCATCAAGGTCAGTACTCC-C--------------------------------ACCCC-C----ATGTTA-------------------A----ACCGT---ACTA-----------------------------------------------------------------------------------GAAACACC--------------------TACCCT-------------------------------------------------------------------C------------------------------------A-ACCCTCTATTGCTT--C---GT--GTGACTCGTAGACCGTAAG---CTTTAAGTCT--TGATTTCTCATCCCAC---------------------------------AAAAAAAAAAAAA---TAATAATAAAAAAATAAGAAATA--ATATACATATT---------------------------------------------------------------------------------------------------------T-------------------------------CAAACC--AATACCA-AAATCCCCAA-TTAAGGGCCTC--------------A----GCGA--AAACTGATCTTGTCTC-
droYak3 2R:18309679-18309957 - ACGTGGAGGTCCAGAACGGCAAGGTCACCGCCTGCTACGACAGCATCAAGGTCAGTATCAC-CCCC-----------------------------ACCCC-CCACAATGTTA-------------------A----ACCGA---ACTA-----------------------------------------------------------------------------------GAGCCACCAACCACCAAA---CCGTCTATACCCT--------------------------------------------------------CAA--------C------------------------------------TC-CCCTCTATTGCTT--C---GT--GTGACTCGTAGACCGTAAG---CTTTAAGTCT--TGATTTCTCATTCCAC---------------------------------CAAAAAAAAAAAA---AA-----------ATTAGAAATA--AT--ATATATT---------------------------------------------------------------------------------------------------------T-------------------------------CAAAGC--AATATCG-AA-TCCCCAAATTAAGGGCCTC--------------A----ACGA--AAACTGATCTTGTCTC-
droEre2 scaffold_4845:12691617-12691883 - der_1118 ACGTGGAAGTCCAGAACGGCAAGGTCACCGCCTGCTACGACAGCATCAAGGTCAGTACTGC-CC-----------------------------------C-A----ATGTTA-------------------A----ACCGA---ACTA-----------------------------------------------------------------------------------GAACCACC--------------------AAC-------------------TCCC---------TT------A----A-CT----------CAA--------C------------------------------------TC-TCCTCTATTGCTT--C---GT--GTGACTCGTAGACCGTAAG---CTTTAAGTCT--TGATTTCTCATCCCAC---------------------------------CAAAAAAAAAAAA---AAAA----AAAAAAAAAAAAATC--AGATATATATT---------------------------------------------------------------------------------------------------------T-------------------------------CAAACC--AATACCA-AA-TCCCCAT-TTGAGGGCCTC--------------A----ACGA--AAACTGATCTTGTCTC-
dp5 3:16730786-16730805 + AC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AA--AAACTGATCTTGTCTC-
droPer2 scaffold_4:39273-39526 - ATGTGGAGGTACAGAACGGCAAGGTCACCGCCTGCTACGACAGCATCAAGGTCAGTATATGCCC-----------------------------------C-A----A--------------------------------------A------------------CCACC-AACAATGACCCCCAACCCCCACACCCC-AC-----------------------------------------------AACCCCAGTCCA---------------------------------------------------------------TAC-------C------------------------------------CC-CCGACTTTTGCTT--CGT--T--GTGGATTGTAGATTGTAAG---CTTTA-------TGATTTTTCACCTCAA---------------------------------AATA-----------------------------------AAAT--AT-----A--------------------------------------------------------------------------------ACCCACCCA--G----AT-----TT-------------------------------C-----------------------G--TTTAGGGCCCCCCCCCACCTCTCAAAAAGAAATA--AAACTGATCTTGTCTC-
droWil2 scf2_1100000004822:645033-645364 - ATGTGGAGGTCCAGAATGGCAAGGTCACTGCTTGTTACGACAGCATTAAGGTCAGTATTAA-TT--A------------------------------ACC--------AA--AAA-----------AAAAAAAAAAAACGATCAATTAAAACCTCAAACCAAACCCCCCCTC-------------------------------T----------------------------------------------------------------------------------------------------------C---TTATTTCCCACCCTCCATTAAACAAAACCAAAAAACCAAAAAAAAAAAAAAAAAAC--ACATTTCTTGCTT--CTTTGTGTATG---TATAGTTTGTAAGAAATTTTCAT----------------------ATGACCCCCG------------------------------------------------------------------------------------------------------------------CCTCCCCAACCATACCGCCACC------------CACAAAAACTTCTCCT--A----CTCTTTTTCTA-----------------------------GAAACC--AACAAC-----------A-TTTAGGCCCAA-------------AA----ACGAAAAAACTGATCTTGTCTCT
droVir3 scaffold_12875:7858438-7858735 + dvi_5675 ATGTGGAGGTGCAGAACGGCAAGGTTACCGCTTGCTATGACAGTATCAAGGTCAGTATTAT-GCCCAACCAGT---ATA----TAGA--------------------------------------------------------------ATGCCAAAACCT-----------------------------ATGCCCACA--TGT----------------------------------------------------------------------------------------------------------A---CC------CA-TTACCACT------------------------------------CC-GCTTCTACCGCGTAT----ATGTATGGAATGTAGCTTGTAAG---CTTTTATATTTTTAACTT-TAATCC-ATCATGGCTTAAGTACTCCACCACCCCCCTCCAACAATG-----------------------------------AGAC--AT------------------------------------------------------------------------------CCA----AACCTGCCCA--G----GTCCCAATGCATTTAAGGACA--------------------AGACCCAAAAACCA-AAA---------------------------------A----AAAA--AAACGGATCTTGTCGC-
droMoj3 scaffold_6496:19442195-19442526 - ATGTTGAGGTGCAGAACGGCAAGGTTACCGCTTGCTATGACAGTATCAAGGTCAGTATCCA-A---------------------------------------------A----------------------A----ACCCA---AC------------------CAACCTGCCTATGATTATCAATATCTATATCTATATATGTAAATAAATATATATATATATATATATAGAGT---G--------------------CAGA----------------------------------C---A---------AACCC------CA-TTAACACT------------------------------------CT-GCTTCTATCGTGTATC---GTGTATGGAATGTAGCTTGTAAG---CTTTTATTTA--TTACTTTTAATACA-TCATGGCTTCAGTACTCTACC-------------------------------------------------------------------------------------------------------------CCAAGCCATACCACCCCCACC-CCAACAAACA----AA-AAACCTATATGAAAACCCA------T-------------------------------------------------------TGCA--GTCCC-------------------AAAA--AAGTGGATCTTGTCGC-
droGri2 scaffold_15245:1357217-1357515 + ATGTCGAAGTGCAGAACGGCAAGGTTACCGCTTGCTATGACAGTATCAAGGTCAGTACCCA-A---A-ACAAA---ACAAAAAAAAA--------------------------------------------------------------ACAACAAAAAAA-ATCCCCCTTC------------------------ACA--TG--------------------------------------------------------------------------------------------------A---------AA-CC------CATTTGCCATT------------------------------------CT-GCTTCTATCGTGTAT----ATGTATGGAATGTAGCTTGTAAG---CTTTATACTA--TTATACTTTAATCCATCATGGCTTAAGTACTCTACC----------------------------------------------------------------------------------------------------------------AACCACCCCACCCTC-CCCCAAAAGACCA----AA-CTCCTTA--G----GCCCC------TTCCACACCAAGAAAAAAAATGAAAA----------------------------------------T--------------G----ATAA--AAACTGATCTTGTCGC-

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droAna3
ATGTGGAGGTCCAGAACGGCAAGGTCACCGCCTGCTACGACAGCATCAAGGTCAGTATTCC-CC--A------------------------------------------A--AAA-----------AAAAAAAAAAAAA--------------------------------------------------------------------------------------------GAG-------------------------CATC---------------------------------------------------------------------C------------------------------------A-ATCCTCTATTGCTT--C---GT--GTGACTCGTAGACCGTAAG---CTTCCAGTCTTTTGATTTCTCATCCCAC---------------------------------AATA-----------------------------------TATT--AT-----AT--AATCCTCTGATAATACCAAGTACCAACTCCC-CCCGCCC-----------------------CCAACCACCA----AC------------------------------------------------------------------------------CAA-CCTAGGGCCTC--------------A----ACGA--AAACTGATCTTGTCTC-SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.TGTGGAGGTCCAGAACGGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1913.003100002
.......GGTCCAGAACGGCAAGGTCAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2113.003000003
....GGAGGTCCAGAACGGCAAGGTCACC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.002100010
.......GGTCCAGAACGGCAAGGTCACC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.002000011
.TGTGGAGGTCCAGAACGGCAAGGTCAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000001
.TGTGGAGGTCCAGAACGG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001100000
.TGTGGAGGTCCAGAACGGCA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000001
ATGTGGAGGTCCAGAACGGCAAGGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000010
.....................AGGTCACCGCCTGCTACGACAGCA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000001
....................AAGGTCACCGCCTGCTACGACAGCATC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000001
......AGGTCCAGAACGGCAAGGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000001
..........CCAGAACGGCAAGGTCACCGCCT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000001
.............................GCCTGCTACGACAGCATCAA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
..GTGGAGGTCCAGAACGGCAAGGTCACC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001100000
.......GGTCCAGAACGGCAAGGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000001
...............ACGGCAAGGTCACCGCCTGCTACGACAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001100000
....GGAGGTCCAGAACGGCAAGGTCACCG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001100000
..GTGGAGGTCCAGAACGGCA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000001
...................CAAGGTCACCGCCTGCTACGACA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
..........CCAGAACGGCAAGGTCACCGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001010000
ATGTGGAGGTCCAGAACGGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
.....GAGGTCCAGAACGGCAAGGTCACCGCC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000001
....GGAGGTCCAGAACGGCAAGGTCACCGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001100000
...........................CCGCCTGCTACGACAGCATC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001010000
........GTCCAGAACGGCAAGGTCACC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
.............GAACGGCAAGGTCACCGCCT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
....................AAGGTCACCGCCTGCTACGACAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
.........................CACCGCCTGCTACGACAGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001010000
...................CAAGGTCACCGCCTGCTACGACAGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001100000
.............GAACGGCAAGGTCACCGCCTG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
..................GCAAGGTCACCGCCTGCTACGACAGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001100000
.................GGCAAGGTCACCGCCTGCTACGAC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001010000
....................AAGGTCACCGCCTGCTACGACAGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001100000
droBip1
ATGTGGAGGTCCAGAACGGCAAGGTCACCGCCTGCTACGACAGCATCAAGGTCAGTATTCC-CC--A------------------------------------------A--AAAATAGACCCAAAAATAAA------AGA---CC-----------------------------------------------------------------------------------------CAAC---------------------AC-------------------TCCC---------CCAA---AA----ACCA----------CAC--------C------------------------------------A-ATCCTCTATTGCTT--C---GT--GTGACTTGTAGACCGTAAG---CTTCCAGTCTTTTGATTTCTCATCCCAC---------------------------------AATA-----------------------------------TATT--AT-----AT--AATCCTAAGATAAAACC-AGTACCAACTCCCCCCCGCCT--------------------------------------------------------------------------------------------------------------------CCGA-ATTAGGGCCTC--------------G----ACGA--AAACTGATCTTGTCTC-SizeHit CountTotal NormTotal
No Reads
droKik1
ACGTGGAGGTGCAGAACGGCAAGGTCACCGCTTGTTACGACAGCATCAAGGTCAGTATTCC-CC--------------------------------CCCC-A----AACCTA-------------------A----GCCCC---TCAC-----------------------------------------------------------------------------------GAAA---------------------------A----------------------------------T---AAAACCACCC---CTACT-------------C------------------------------------CC-CCCTCTATTGCTT--C---GT--GTGACTCGTAGACCGTAAG---CTTCAAGTCTTTTAATTTCTCATCCCAC---------------------------------AAAAAAA-----------------------------------T--GA-----ATAAG-------------------------------------------------------------------------------------------------------------AACA--------------------AATCCAAAATACCA-AAAC-CCCGATTTTAGGGCCTC--------------A----ACGA--AAACTGATCTTGTCTC-SizeHit CountTotal NormTotal
No Reads
droFic1
ACGTGGAGGTCCAGAACGGCAAGGTCACCGCCTGTTACGACAGCATCAAGGTCAGTATCCC-CC--------------------------------------------GATA-------------------A------CGA---ACTA-----------------------------------------------------------------------------------GAC-----------------------------------------------TCCCTCGAATCCCCCAA---AA----ACCC----------CTC-CCC----C------------------------------------CAA-TCTCTATCGCTT--C---GT--GTGACTCGTAGACCGTAAG---CTT-ACGACTTATGATTTCTCATCCCAC---------------------------------AAAAACAAGAAAAAAA-A------------------AT---ATATATATATG---------------------------------------------------------------------------------------------------------A-------------------------------TAATCC--AATACCG-AT-T-CCCGA-TCCAGGGCCTC--------------G----ACGA--AAACTGATCTTGTCTC-SizeHit CountTotal NormTotal
No Reads
droEle1
ATGTGGAGGTCCAGAACGGCAAGGTCACCGCCTGCTACGACAGCATCAAGGTCAGTATCCC-CT--A----------------------------------------AGC----A-----------AACAAA------CGA---ACTA-----------------------------------------------------------------------------------AAC-----------------------------------------------TCCT---------CCAACCGAA----ACTC----------CTA--------C------------------------------------CC-CCTTCTATTGCTT--C---GT--GTGACTCGTAGTTTGTAAG---CTTTAAGACTTATGATTTCTCATCCCAC---------------------------------CAAAAAAA----------------------------------T--AT--------------------------------------------------------------------------------------------------------------------------------------GATTATGATAAGCA--ACTACCG-AA-ACCCCAATTTTAGGGCCTC--------------A----GCGA--AAACTGATCTTGTCTC-SizeHit CountTotal NormTotal
No Reads
droRho1
ACGTGGAGGTCCAGAACGGCAAGGTCACCGCCTGCTACGACAGCATCAAGGTCAGTATTCC-CC--------------------------------TCCCCC----CAGC---------------------A----AACGA---ACTA-----------------------------------------------------------------------------------GACTCCCC--------------------AATCTC-------------------------------------------------------------------C------------------------------------CC-CCCTCTATTGCTT--C---GT--GTGACTCGTAGAATGTAAG---CTTTAAGATTTATGATTTCTCATCCCAC---------------------------------AAAAAAAACCAAAAAA-A------ACAAA------------------ATATG---------------------------------------------------------------------------------------------------------A-------------------------------TAAGCC--AATACCG-AA-TCCCCAATTTTAGGGCCTC--------------A----ACGA--AAACTGATCTTGTCTC-SizeHit CountTotal NormTotal
No Reads
droBia1
ACGTGGAGGTCCAGAACGGCAAGGTCACCGCCTGCTACGACAGCATCAAGGTCAGTACCCC-A---------------------------------------------G----------------------A----ATCGA---ACCA-----------------------------------------------------------------------------------GAGC---C--------------------CACC---------------------------------------------------------------------C------------------------------------A-ACCCCCTATTGCTT--C---GT--GTGACTCGTAGA-CGTAAG---CCT-AGGACTCTTTATTTCTCATCCCAC---------------------------------CAAA-----------------------------------TACT--AT--TCGATA--------------------------------------------------------------------------------------------------------------------------------------CGATCC--AAT-CCG-AA-C-CCCG--TCCAGGGCCTC--------------G----ACGA--AAACTGATCTTGTCTC-SizeHit CountTotal NormTotal
No Reads
droTak1
ACGTGGAGGTCCAGAACGGCAAGGTCACCGCCTGCTACGACAGCATCAAGGTCAGTATCA----------------------------------------------------------------------------ACCTA---ACTA-----------------------------------------------------------------------------------GTACC--C---------------------------AACCACCCACTCAACTCC---------------CGAA----T-----------------------CT------------------------------------CC-CCCTCTATTGCTT--C---GTGTGTGACTCGTAGACTGTAAG---CTTTAAGACTTATGATTTCTCATCCCAA---------------------------------AAAA-----------------------------------AA-T--CT-----TTATGATC-------------------------------------------------------------------------------------------------T-------------------------------TAAACC--AATACCGAAAACCCCCAT-TTTAGGGCCTC--------------A----ACGA--AAACTGATCTTGTCTC-SizeHit CountTotal NormTotal
No Reads
droEug1
ACGTGGAGGTCCAGAACGGCAAGGTCACCGCCTGCTACGACAGCATCAAGGTCAGTATTCC-TTCTAACGAGAAAAACAGAA----AATCCCTCTACCCC-CTA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGAAATCCTTAAAAAAA----AATC----------CTA-CCA----C------------------------------------CA-CCTTCTATTGCTT--C---GT--GTGACTTGTAGACCGTAAG---CTTTAAGTCTTATAATTTTTCATCCCAC---------------------------------AAAAAAAGAAAGA---AA-------CGA------------------------AAAA-----------------------------------------------------------------------------------------------------------------------------GATAATGAT----------------A-TCCCCAA-ATTAGGGCCTC--------------A----GCGA--AAACTGATCTTGTCTC-SizeHit CountTotal NormTotal
No Reads
dm3
ACGTGGAGGTCCAGAACGGCAAGGTCACCGCCTGCTACGACAGCATCAAGGTCAGTACTCC-C--------------------------------ATACC-C----TTGTTA-------------------A----ACCGA---ACTA-----------------------------------------------------------------------------------GAAACACC--------------------TACCCTCAACCA---------------------------------------C----------CAA--------C------------------------------------TC-CCCTCTATTGCTT--C---GT--GTGACTCGTAGACCGTAAG---CTTTAAGTCT--TGATTTCTCATCCCAC---------------------------------AAAAAAAAAGAAA---AAATAA--AATAAACAAGAAATA--ATATACATATT---------------------------------------------------------------------------------------------------------T-------------------------------CAAACC--AATACCG-AA-TCCCCAA-TTAAGGGCCTC--------------A----GCGA--AAACTGATCTTGTCTC-SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
............................................................................................................................................................................................................................................ACC--------------------TACCCTCAACCA---------------------------------------C----------CAA--------C------------------------------------..........................................................................................................................................................................................................................................................................................................................................................................................2014.0040000000000000000000000000000000000000000000000000000000000310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........GTCCAGAACGGCAAGGTCACCGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2313.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........GTCCAGAACGGCAAGGTCACCGCCTGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000001010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGGGCCTC--------------A----GCGA--AAACTGATCT.......2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000
.....GAGGTCCAGAACGGCAAGGTC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000
.CGTGGAGGTCCAGAACGG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
.CGTGGAGGTCCAGAACGGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................CGGCAAGGTCACCGCCTGCTACGACA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................T--C---GT--GTGACTCGTAGACCGTAAG---CTT.......................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
................................................................................................................................................................................................................................................................................................................................................................................................T--C---GT--GTGACTCGTAGACCGTAAG---CTC.......................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TA--ATATACATATT---------------------------------------------------------------------------------------------------------T-------------------------------CAAACC--AATACCG-AA-.............................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.CGTGGAGGTCCAGAACGGCAAGGTCAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................AACACC--------------------TACCCTCAACCA---------------------------------------C----------CAA--------C------------------------------------..........................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................CTCC-C--------------------------------ATACC-C----TTGTTA-------------------A----ACC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACCG-AA-TCCCCAA-TTAAGGGCCTC--------------A----GC.....................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
ACGTGGAGGTCCAGAACGGCAAGGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
.........TCCAGAACGGCAAGGTCACCGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAA-TTAAGGGCCTC--------------A----GCGA--AAACT............2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.....GAGGTCCAGAACGGCAAGGTCACCGCCTG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....GGAGGTCCAGAACGGCAAGGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................TCTATTGCTT--C---GT--GTGAC...........................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................CAAGGTCACCGCCTGCTACGACAGCA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
ACGTGGAGGTCCAGAACGGCA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................TACC-C----TTGTTA-------------------A----ACCGA---ACTA-----------------------------------------------------------------------------------GAAACACC--------------------........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......AGGTCCAGAACGGCAAGGTCAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................ACCGCCTGCTACGACAGCATCAAGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................TCACCGCCTGCTACGACAGCATCAAGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................CAAGGTCACCGCCTGCTA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........GTCCAGAACGGCAAGGTC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................AA--------C------------------------------------TC-CCCTCTATTGCTT--C---GT--GT..............................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................TTGCTT--C---GT--GTGACTCGTAGACCGTA...............................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.........................CACCGCCTGCTACGACAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................CCCTCTATTGCTT--C---GT--GTGACTCGTAG.....................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...........CAGAACGGCAAGGTCACCGCCTGCTA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
.........TCCAGAACGGCAAGGTCACCGCCTGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................C---GT--GTGACTCGTAGACCG.................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
ACGTGGAGGTCCAGAACGGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................TATTGCTT--C---GT--GTGACTCGTAGACCG.................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAAGGGCCTC--------------A----GCGA--AAACTGATCTTG.....2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................T--TGATTTCTCATCCCAC---------------------------------AAAAAAAAAGAA.................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............GAACGGCAAGGTCACCGCCTGCTAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..GTGGAGGTCCAGAACGGCAAGGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......GGTCCAGAACGGCAAGGTCAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................ATTGCTT--C---GT--GTGACTCGTAGACC..................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................GGCAAGGTCACCGCCTGCTA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................TGACTCGTAGACCGTAAG---CTTTAAGT..................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..........................ACCGCCTGCTACGACAGCATCAAGGTCAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................CC--------------------TACCCTCAACCA---------------------------------------C----------CAA--------C------------------------------------..........................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................CGCCTGCTACGACAGCATCAA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................AAGGTCACCGCCTGCTACGACAGCA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........GTCCAGAACGGCAAGGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.CGTGGAGGTCCAGAACGGCAAGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................TC-CCCTCTATTGCTT--C---GT--GTGACTCG........................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..GTGGAGGTCCAGAACGGCAAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................GTCACCGCCTGCTACGACAGCATCAAGG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......AGGTCCAGAACGGCAAGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................CACCGCCTGCTACGACAGCATCAA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.CGTGGAGGTCCAGAACGGCA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................GTCACCGCCTGCTACGACA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCCTC--------------A----GCGA--AAACTGATCTT......2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................CGCCTGCTACGACAGCATCA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAA---AAATAA--AATAAACAAGAAATA--AT..................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................GTCACCGCCTGCTACGACAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............GAACGGCAAGGTCACCGCCTGCTACGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................CCGCCTGCTACGACAGCATCAA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................GGCAAGGTCACCGCCTGCTAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................TATTGCTT--C---GT--GTGACTCGTAGACCGTA...............................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAGAAA---AAATAA--AATA.................................................................................................................................................................................................................................................1930.3310000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAC---------------------------------AAAAAAAAAGAAA---AA...........................................................................................................................................................................................................................................................1930.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAAAGAAA---AAATAA--.....................................................................................................................................................................................................................................................19130.1520000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAAGAAA---AAATAA--AA...................................................................................................................................................................................................................................................2070.1410000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAGAAA---AAATAA--AA...................................................................................................................................................................................................................................................17190.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
ACGTGGAGGTCCAGAACGGCAAGGTCACCGCCTGCTACGACAGCATCAAGGTCAGTACTCC-C--------------------------------ACCCC-C----ATGTTA-------------------A----ACCGT---ACTA-----------------------------------------------------------------------------------GAAACACC--------------------TACCCT-------------------------------------------------------------------C------------------------------------A-ACCCTCTATTGCTT--C---GT--GTGACTCGTAGACCGTAAG---CTTTAAGTCT--TGATTTCTCATCCCAC---------------------------------AAAAAGAAAAAAA----AATAATAAAAAAATATGAAATA--ATATACATATT---------------------------------------------------------------------------------------------------------T-------------------------------CAAACC--AATACCA-AAATCCCCAA-TTAAGGGCCTC--------------A----GCGA--AAACTGATCTTGTCTC-SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGA--AAACTGATCTTGTC...1811.00100000100000000000
...............ACGGCAAGGTCACCGCCTG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100000100000000000
......AGGTCCAGAACGGCAAGGTC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000000000100000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAA----AATAATAAAAA.................................................................................................................................................................................................................................................17200.05100000000000001000
droSec2
ACGTGGAGGTCCAGAACGGCAAGGTCACCGCCTGCTACGACAGCATCAAGGTCAGTACTCC-C--------------------------------ACCCC-C----ATGTTA-------------------A----ACCGT---ACTA-----------------------------------------------------------------------------------GAAACACC--------------------TACCCT-------------------------------------------------------------------C------------------------------------A-ACCCTCTATTGCTT--C---GT--GTGACTCGTAGACCGTAAG---CTTTAAGTCT--TGATTTCTCATCCCAC---------------------------------AAAAAAAAAAAAA---TAATAATAAAAAAATAAGAAATA--ATATACATATT---------------------------------------------------------------------------------------------------------T-------------------------------CAAACC--AATACCA-AAATCCCCAA-TTAAGGGCCTC--------------A----GCGA--AAACTGATCTTGTCTC-SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
..GTGGAGGTCCAGAACGGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.0020011
..GTGGAGGTCCAGAACGGCAAGGTCAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010100
..........CCAGAACGGCAAGGTCACCGCCT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010010
.........................CACCGCCTGCTACGACAGCAT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0011000
.................GGCAAGGTCACCGCCTGCTACGACAGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0011000
..GTGGAGGTCCAGAACGGCAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100
.............GAACGGCAAGGTCACCGCCTG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0011000
ACGTGGAGGTCCAGAACGG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100
..........CCAGAACGGCAAGGTCACCG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010010
.......GGTCCAGAACGGCAAGGTCACCGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010010
...............................CTGCTACGACAGCATCAAGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010010
........................TCACCGCCTGCTACGACA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0011000
........GTCCAGAACGGCAAGGTCACCGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010010
droYak3
ACGTGGAGGTCCAGAACGGCAAGGTCACCGCCTGCTACGACAGCATCAAGGTCAGTATCAC-CCCC-----------------------------ACCCC-CCACAATGTTA-------------------A----ACCGA---ACTA-----------------------------------------------------------------------------------GAGCCACCAACCACCAAA---CCGTCTATACCCT--------------------------------------------------------CAA--------C------------------------------------TC-CCCTCTATTGCTT--C---GT--GTGACTCGTAGACCGTAAG---CTTTAAGTCT--TGATTTCTCATTCCAC---------------------------------CAAAAAAAAAAAA---AA-----------ATTAGAAATA--AT--ATATATT---------------------------------------------------------------------------------------------------------T-------------------------------CAAAGC--AATATCG-AA-TCCCCAAATTAAGGGCCTC--------------A----ACGA--AAACTGATCTTGTCTC-SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.CGTGGAGGTCCAGAACGGCAAGGTCACC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000010000
.......GGTCCAGAACGGCAAGGTCAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000010000
...............................................................................................................................................................................................................................................................................................................................................................................................TT--C---GT--GTGACTCGTAGACCGTAAG---CTT.......................................................................................................................................................................................................................................................................................................................................2711.00101000000000
.......................................................................................................................................................................................................................................................................CT--------------------------------------------------------CAA--------C------------------------------------TC-CCCTCTATTGCTT--C---GT--GTGA............................................................................................................................................................................................................................................................................................................................................................2811.00101000000000
...........CAGAACGGCAAGGTCACCGCCT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000010000
ACGTGGAGGTCCAGAACGGCAAGGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000010000
.CGTGGAGGTCCAGAACGGCAAGGTCAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000010000
..GTGGAGGTCCAGAACGGCAAGGTC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000010000
droEre2
ACGTGGAAGTCCAGAACGGCAAGGTCACCGCCTGCTACGACAGCATCAAGGTCAGTACTGC-CC-----------------------------------C-A----ATGTTA-------------------A----ACCGA---ACTA-----------------------------------------------------------------------------------GAACCACC--------------------AAC-------------------TCCC---------TT------A----A-CT----------CAA--------C------------------------------------TC-TCCTCTATTGCTT--C---GT--GTGACTCGTAGACCGTAAG---CTTTAAGTCT--TGATTTCTCATCCCAC---------------------------------CAAAAAAAAAAAA---AAAA----AAAAAAAAAAAAATC--AGATATATATT---------------------------------------------------------------------------------------------------------T-------------------------------CAAACC--AATACCA-AA-TCCCCAT-TTGAGGGCCTC--------------A----ACGA--AAACTGATCTTGTCTC-SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
..GTGGAAGTCCAGAACGGCAAGGTC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2414.0040000310
..........CCAGAACGGCAAGGTCACCGCCT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.0021000100
........GTCCAGAACGGCAAGGTCAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020000200
.CGTGGAAGTCCAGAACGGCAAGGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.0020000200
....GGAAGTCCAGAACGGCAAGGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0022000000
..........CCAGAACGGCAAGGTCAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.0021000010
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAAAA---AAAA----AAAAAAAAAAA..........................................................................................................................................................................................................................................25201.252525000000
......AAGTCCAGAACGGCAAGGTC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000100
..GTGGAAGTCCAGAACGGCAAGGTCAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000100
..GTGGAAGTCCAGAACGGCAAGGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000100
........................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCAC---------------------------------CAAAAAAAAAAAA---AAAA----AAAAAAAAAAAAAA.......................................................................................................................................................................................................................................3611.0010010000
.................GGCAAGGTCACCGCCTGCTACGACAGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010100000
..........CCAGAACGGCAAGGTCACCGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0011000000
............................CGCCTGCTACGACAGCATCAAGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0011000000
.................GGCAAGGTCACCGCCTGCTACGAC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010100000
....GGAAGTCCAGAACGGCAAGGTCACC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010100000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAAAA---AAAA----AAAAAAAAAAAA.........................................................................................................................................................................................................................................26200.951919000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................CAC---------------------------------CAAAAAAAAAAAA---AAAA----AAAA.................................................................................................................................................................................................................................................2460.1711000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAA---AAAA----AAAAAAAAAAAAA........................................................................................................................................................................................................................................21200.1020200000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAAAAAA---AAAA----AAAAAAAAAAAAA........................................................................................................................................................................................................................................29200.0510100000
dp5
AC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AA--AAACTGATCTTGTCTC-SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
No Reads
droPer2
ATGTGGAGGTACAGAACGGCAAGGTCACCGCCTGCTACGACAGCATCAAGGTCAGTATATGCCC-----------------------------------C-A----A--------------------------------------A------------------CCACC-AACAATGACCCCCAACCCCCACACCCC-AC-----------------------------------------------AACCCCAGTCCA---------------------------------------------------------------TAC-------C------------------------------------CC-CCGACTTTTGCTT--CGT--T--GTGGATTGTAGATTGTAAG---CTTTA-------TGATTTTTCACCTCAA---------------------------------AATA-----------------------------------AAAT--AT-----A--------------------------------------------------------------------------------ACCCACCCA--G----AT-----TT-------------------------------C-----------------------G--TTTAGGGCCCCCCCCCACCTCTCAAAAAGAAATA--AAACTGATCTTGTCTC-SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.......................GTCACCGCCTGCTACGACAGCATCAAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.002200000
........GTACAGAACGGCAAGGTCAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001010000
........GTACAGAACGGCAAGGTCACCG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000001
ATGTGGAGGTACAGAACGGCAAGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000001
ATGTGGAGGTACAGAACGGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000001
..GTGGAGGTACAGAACGGCAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000010
.TGTGGAGGTACAGAACGGCA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000010
ATGTGGAGGTACAGAACGGCAAGGTC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000010
droWil2
ATGTGGAGGTCCAGAATGGCAAGGTCACTGCTTGTTACGACAGCATTAAGGTCAGTATTAA-TT--A------------------------------ACC--------AA--AAA-----------AAAAAAAAAAAACGATCAATTAAAACCTCAAACCAAACCCCCCCTC-------------------------------T----------------------------------------------------------------------------------------------------------C---TTATTTCCCACCCTCCATTAAACAAAACCAAAAAACCAAAAAAAAAAAAAAAAAAC--ACATTTCTTGCTT--CTTTGTGTATG---TATAGTTTGTAAGAAATTTTCAT----------------------ATGACCCCCG------------------------------------------------------------------------------------------------------------------CCTCCCCAACCATACCGCCACC------------CACAAAAACTTCTCCT--A----CTCTTTTTCTA-----------------------------GAAACC--AACAAC-----------A-TTTAGGCCCAA-------------AA----ACGAAAAAACTGATCTTGTCTCTSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
..............AATGGCAAGGTCACTGCTTGTTACGAC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.00220000
.................................GTTACGACAGCATTAAGGGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.00200011
....................AAGGTCACTGCTTGTTACGACAGCA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.00201010
.....................AGGTCACTGCTTGTTACGACAGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00101000
......AGGTCCAGAATGGCAAGGTCACT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00101000
..........CCAGAATGGCAAGGTCACTGCTT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100010
.......GGTCCAGAATGGCAAGGTCACTGCTT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00101000
......AGGTCCAGAATGGCAAGGTCACTGCTT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100010
.......GGTCCAGAATGGCAAGGTCA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100100
....................AAGGTCACTGCTTGTTACGACA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00101000
........GTCCAGAATGGCAAGGTCACT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100010
......................GGTCACTGCTTGTTACGACA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00101000
....................AAGGTCACTGCTTGTTACGAC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000
droVir3
ATGTGGAGGTGCAGAACGGCAAGGTTACCGCTTGCTATGACAGTATCAAGGTCAGTATTAT-GCCCAACCAGT---ATA----TAGA--------------------------------------------------------------ATGCCAAAACCT-----------------------------ATGCCCACA--TGT----------------------------------------------------------------------------------------------------------A---CC------CA-TTACCACT------------------------------------CC-GCTTCTACCGCGTAT----ATGTATGGAATGTAGCTTGTAAG---CTTTTATATTTTTAACTT-TAATCC-ATCATGGCTTAAGTACTCCACCACCCCCCTCCAACAATG-----------------------------------AGAC--AT------------------------------------------------------------------------------CCA----AACCTGCCCA--G----GTCCCAATGCATTTAAGGACA--------------------AGACCCAAAAACCA-AAA---------------------------------A----AAAA--AAACGGATCTTGTCGC-SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
ATGTGGAGGTGCAGAACGGCAAGGTTAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2812.002200000000000000000000000000000000000000000000000000000000000000
....................AAGGTTACCGCTTGCTATGACAGTATC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000100000000000000000000000000000000000000000000000000000000000
..................................CTATGACAGTATCAAGGT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001001000000000000000000000000000000000000000000000000000000000000
.TGTGGAGGTGCAGAACGGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000010000000000000000000000000000000000000000000000000000000
........GTGCAGAACGGCAAGGTTAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000000000000000000000000000000000010
......................GGTTACCGCTTGCTATGAC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
..........GCAGAACGGCAAGGTTACCGCTT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000100000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................TCATGGCTTAAGTACTCC.............................................................................................................................................................................................................................................................................................1811.001010000000000000000000000000000000000000000000000000000000000000
.................................GCTATGACAGTATCAAGGGAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2120.501010000000000000000000000000000000000000000000000000000000000000
droMoj3
ATGTTGAGGTGCAGAACGGCAAGGTTACCGCTTGCTATGACAGTATCAAGGTCAGTATCCA-A---------------------------------------------A----------------------A----ACCCA---AC------------------CAACCTGCCTATGATTATCAATATCTATATCTATATATGTAAATAAATATATATATATATATATATAGAGT---G--------------------CAGA----------------------------------C---A---------AACCC------CA-TTAACACT------------------------------------CT-GCTTCTATCGTGTATC---GTGTATGGAATGTAGCTTGTAAG---CTTTTATTTA--TTACTTTTAATACA-TCATGGCTTCAGTACTCTACC-------------------------------------------------------------------------------------------------------------CCAAGCCATACCACCCCCACC-CCAACAAACA----AA-AAACCTATATGAAAACCCA------T-------------------------------------------------------TGCA--GTCCC-------------------AAAA--AAGTGGATCTTGTCGC-SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
....TGAGGTGCAGAACGGCAAGGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
.......................GTTACCGCTTGCTATGACA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
....................AAGGTTACCGCTTGCTATGAC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
..........GCAGAACGGCAAGGTTACCGCTT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
..........GCAGAACGGCAAGGTTACCG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000001
.TGTTGAGGTGCAGAACGGCAAGGTT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001100000
.....................AGGTTACCGCTTGCTATGACAGTATCA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001100000
.....................AGGTTACCGCTTGCTATGACA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
...............ACGGCAAGGTTACCGCTTG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
.....................AGGTTACCGCTTGCTATGACAGTA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001100000
..........GCAGAACGGCAAGGTTACCGCT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
droGri2
ATGTCGAAGTGCAGAACGGCAAGGTTACCGCTTGCTATGACAGTATCAAGGTCAGTACCCA-A---A-ACAAA---ACAAAAAAAAA--------------------------------------------------------------ACAACAAAAAAA-ATCCCCCTTC------------------------ACA--TG--------------------------------------------------------------------------------------------------A---------AA-CC------CATTTGCCATT------------------------------------CT-GCTTCTATCGTGTAT----ATGTATGGAATGTAGCTTGTAAG---CTTTATACTA--TTATACTTTAATCCATCATGGCTTAAGTACTCTACC----------------------------------------------------------------------------------------------------------------AACCACCCCACCCTC-CCCCAAAAGACCA----AA-CTCCTTA--G----GCCCC------TTCCACACCAAGAAAAAAAATGAAAA----------------------------------------T--------------G----ATAA--AAACTGATCTTGTCGC-SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
...........................CCGCTTGCTATGACAGTAT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00110
.......................................................................AA---ACAAAAAAAAA--------------------------------------------------------------ACAAC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.05110

Generated: 05/18/2015 at 03:25 AM