ID:

dan_1967

 Coordinate:

scaffold_13266:12754159-12754287 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-39.5 -39.4 -39.4

Flybase annnotation

exon [dana_GLEANR_13396:1]; exon [dana_GLEANR_13396:2]; CDS [Dana\GF13381-cds]; CDS [Dana\GF13381-cds]; intron [Dana\GF13381-in]

No Repeatable elements found

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------##################################################
GGCACATCTGGCACGGCGAGCTCGAGCAGCTGCAGGAGGCCATCGACCAGGTGAGAGTAGCGGTTGGTTGGGGTGGGGTGTGGCCCTGCGGAAAAGTGCTAATTGAATTAGCGCGGGTTGCGGAGCACGGCTCTAGCGATAATACAGCCGAAACATTCTAATGATTTGACATATTTCAGAACGAGAACGATAAGGAGAAAATCGATCCCCGTGGGCGGACTCCCCTGAT
**************************************************..(((.((..((((((((((...((((((...((.((((((....((((((((...))))))))...)))))).))...))))))....)))).))))))..)).))).....................************************************************** 		Read size # Mismatch Hit Count Total Norm Total V106
head
 V105
male body		 M044
female body
 M058
embryo
 V055
head
 V039
embryo
...........................................................GCGGTTGGTTGGGGTGGGG....................................................................................................................................................... 19 0 1 33.00 33 30 2 0 0 1 0
...........................................................GCGGTTGGTTGGGGTGGGGT...................................................................................................................................................... 20 0 1 9.00 9 8 1 0 0 0 0
...........................................................GCGGTTGGTTGGGGTGGGGTGTGGCC................................................................................................................................................ 26 0 1 3.00 3 3 0 0 0 0 0
..............................................................GTTGGTTGGGGTGGGGTGTGG.................................................................................................................................................. 21 0 1 2.00 2 2 0 0 0 0 0
.....ATCTGGCACGGCGAGCTCGAGCAGCTGC.................................................................................................................................................................................................... 28 0 1 2.00 2 0 0 2 0 0 0
....CATCTGGCACGGCGAGCTCGA............................................................................................................................................................................................................ 21 0 1 1.00 1 0 0 0 1 0 0
...........................................................GCGGTTGGTTGGGGTGGGGTGTGGC................................................................................................................................................. 25 0 1 1.00 1 1 0 0 0 0 0
...........................................................GCGGTTGGTTGGGGTAGGGTGTG................................................................................................................................................... 23 1 1 1.00 1 0 1 0 0 0 0
..........................................................AGCGGTTGGTTGGGGTGGGGT...................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0
..............................................................GTTGGTTGGGGTGGGGTGTGGCC................................................................................................................................................ 23 0 1 1.00 1 0 1 0 0 0 0
...............................................................TTGGTTGGGGTGGGGTGTGTCC................................................................................................................................................ 22 1 1 1.00 1 1 0 0 0 0 0
..................................................................................................................................................................................GAACGAGAACGATAAGGAGAA.............................. 21 0 1 1.00 1 0 0 0 1 0 0
..............................................................GTTGGTTGGGGTGGGGTGTGGCCC............................................................................................................................................... 24 0 1 1.00 1 1 0 0 0 0 0
.............................................................................................................................................................................GACCAGAACGAGAACGATAAGGAGAAA............................. 27 3 1 1.00 1 1 0 0 0 0 0
..................................................................GTTGGGGTGGGGTGTGGCCCTGCGG.......................................................................................................................................... 25 0 1 1.00 1 0 0 1 0 0 0
.................................................................................................................................................................................ATAACGAGAACGATAAGGAGAAAAT........................... 25 1 1 1.00 1 0 0 0 1 0 0
..........................................................AGCGGTTGGTTGGGGTGGGGTGTGGC................................................................................................................................................. 26 0 1 1.00 1 1 0 0 0 0 0
..........................................................AGCGGTTGGTTGGGGTGGGG....................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0
.........................................................TAGCGGTTTGTTGGGGTGGGGT...................................................................................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0
.........................................................................TGGGGTGTGGCCAAGCGGTAA....................................................................................................................................... 21 3 2 0.50 1 0 0 1 0 0 0
............ACGGCGAGCGTGAGCAGCT...................................................................................................................................................................................................... 19 2 2 0.50 1 0 0 1 0 0 0
...............................................................TTGGTTGGGTTGGGGTGT.................................................................................................................................................... 18 1 2 0.50 1 0 0 1 0 0 0
...................GCTCGAGCAGCTGCAGGAGC.............................................................................................................................................................................................. 20 1 3 0.33 1 0 1 0 0 0 0
......................................................GAGTCGCGCTTGGTTGGGCTG.......................................................................................................................................................... 21 3 3 0.33 1 0 0 0 0 0 1
................................................................................TGGCACTCCGGAAAACTGCTA................................................................................................................................ 21 3 3 0.33 1 0 0 0 0 1 0
.................................................................................................................................................................................AGAACGAAAACGATAAAGAG................................ 20 2 3 0.33 1 0 1 0 0 0 0
.............................................................................................................................................................................................ATAAGGAGAAAATCGCTGCC.................... 20 2 4 0.25 1 0 0 0 1 0 0
.......................................................AGTCGCGGTTGGTTGGGA............................................................................................................................................................ 18 2 5 0.20 1 0 0 0 0 1 0
....................................................GATAGTAGCGCTTGTTTGGGG............................................................................................................................................................ 21 3 6 0.17 1 0 0 0 0 1 0
..........................................................AGCGGTTGGTTGGGGTTT......................................................................................................................................................... 18 2 7 0.14 1 0 0 0 0 1 0
....................................................GAGAGGCGGGGTTGGTTGGGG............................................................................................................................................................ 21 3 8 0.13 1 0 0 0 0 1 0
...............................................................GTGGTTGGGGGGGGGTGTGG.................................................................................................................................................. 20 2 10 0.10 1 0 0 0 0 1 0
........................................................GTAGGGGTTGGTTGGGGTAC......................................................................................................................................................... 20 3 10 0.10 1 0 0 0 0 0 1
.........................................................................TGGGGTGTAGCCAAGCGGAA........................................................................................................................................ 20 3 10 0.10 1 0 0 1 0 0 0
......................................................................................................................................................................................GAGAACGACAAGGACAAAA............................ 19 2 14 0.07 1 0 0 0 0 1 0
..........GCACGGCGAGCTCGGACGGC....................................................................................................................................................................................................... 20 3 16 0.06 1 0 0 0 0 1 0
..........................................................................................................................................CTAATACTGCCGAAACGTT........................................................................ 19 3 17 0.06 1 0 0 0 0 1 0
.............................................................................................................................................................................................ATAAGGAGAAAAGCCAACCC.................... 20 3 20 0.05 1 0 0 0 1 0 0
................................................................................................................GCGGGTGGCGGTGCACG.................................................................................................... 17 2 20 0.05 1 0 0 0 0 1 0

Anti-sense strand reads

CCGTGTAGACCGTGCCGCTCGAGCTCGTCGACGTCCTCCGGTAGCTGGTCCACTCTCATCGCCAACCAACCCCACCCCACACCGGGACGCCTTTTCACGATTAACTTAATCGCGCCCAACGCCTCGTGCCGAGATCGCTATTATGTCGGCTTTGTAAGATTACTAAACTGTATAAAGTCTTGCTCTTGCTATTCCTCTTTTAGCTAGGGGCACCCGCCTGAGGGGACTA
**************************************************..(((.((..((((((((((...((((((...((.((((((....((((((((...))))))))...)))))).))...))))))....)))).))))))..)).))).....................************************************************** 		Read size # Mismatch Hit Count Total Norm Total V106
head
 M058
embryo
 M044
female body
 V055
head
 V039
embryo
...............................CGTCCTCCGGTAGCTGGTCCA................................................................................................................................................................................. 21 0 1 2.00 2 2 0 0 0 0
...................................................................................................................................................................................CTGCTCTTGCTATTCCTCTTT............................. 21 1 1 1.00 1 0 1 0 0 0
......AGTCCGTGCCGATCGAGCAC........................................................................................................................................................................................................... 20 3 4 0.25 1 0 0 0 1 0
.GGTCTAGACCGTGCCGTTCG................................................................................................................................................................................................................ 20 3 5 0.20 1 0 0 1 0 0
.........................CGTCGACGGCCTCTGGTACCTG...................................................................................................................................................................................... 22 3 7 0.14 1 0 0 1 0 0
............AGCCGCTAGAGCGCGTCGACG.................................................................................................................................................................................................... 21 3 9 0.11 1 0 0 1 0 0
.............................................................CGAACCAACCCCAGCACACA.................................................................................................................................................... 20 3 16 0.06 1 0 0 0 0 1
............................CGACGTTCTCCGGTGCCTGG..................................................................................................................................................................................... 20 3 16 0.06 1 0 0 0 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droAna3 scaffold_13266:12754109-12754337 + dan_1967 GGCACATCTGGCACGGCGAGCTCGAGCAGCTGCAGGAGGC------CATCGACCAGGTGAGAGT------------------------------AGCGGTTGG---T---------------------------------------------------------------------------------------------------TG-G-----------GGTGGGGTGTGGCCC-TGCGGAAAAGTGC------------------------------------------------------------------------TAATTGAATTAGCGCGGG-T------TG---CGGAG------CACG---GC---------------------------TCTAG---------------CGATAA---TACAG-------------CCGAAACATTCTAATGATT-TGACATATTTCAGAACGAGAACGATAAGGAGAAAATCGATCCCCGTGGGCGGACTCCCCTGAT
droBip1 scf7180000396372:234332-234561 + GGCACATCTGGCACGGTGAGCTGGAGCAGCTGCAGGCGGC------CATCGACCAGGTGAGAGT------------------------------GGAGGGTGGG--T---------------------------------------------------------------------------------------------------TG-G-----------GGTGGGGTGTGGCCC-TGCGAAATGGTGC------------------------------------------------------------------------TAATTGAATTAGCGCAGG-T------TGCG-GGG--------CACG---AA---------------------------TGAGG---------------CGATAA---TACAA-------------CCAAAACAAGCTAATGATT-CGTCATATTTCAGAATGAGAACGATAAGGAAAAAATCGATCCCCGCGGGCGAACTCCCTTGAT
droKik1 scf7180000302682:822424-822653 - GGCACATCTGGCACAACGAACTGGAGCAGCTGCAGGCGGC------CATCGACCAGGTGAGTGA-----------------GGCGAAAGCGAGGAGGGGGTGG---CG---------------------------------------------------------------------------------------------GCGCACA-G-----------GGT-GGGTGTGGCCCCCAGGGCCAGGTGC------------------------------------------------------------------------TAATTGAATTAGCAGGGG-C------CG---GGGAATTCTAGCCAA------------------------------------T---------------TGATAA---CA-------------------------GCTAACGATT-CGTCATCTTTTAGA------ACGATAAGGAGAAAATCGATCCTCGCGGCCGGACGCCGCTGAT
droFic1 scf7180000454044:834789-835007 - GGCACATCTGGCACAACGAACTGGAGCAGCTGCAGGCGGC------CATCGACCAGGTGAAAAG-------------------------AGGGGCGGGGG------T------------------------------------------------------------------------------------------------------------------GGT-GGGTGTGGCCCCCGGGGACAGGTGC------------------------------------------------------------------------TAATTGAATTAGCAGGGT-T------CC-GGGGGAAAT--GTCATG------------------------------------GCAGGG----------AGATAATGAAA-------------------------ACCACTGATTCCGTCACCTTGCAGA------ACGATAAGGAGAAAATCGATCCCCGCGGACGTACGCCACTGAT
droEle1 scf7180000491152:87464-87703 - GGCACATCTGGCACAACGAACTGGAGCAGCTGCAGGCGGCATTGGCAGTCGACGAGGTGAAAAG------------------------------AAGGGTGGGG--TGCTCCGGGGGGTGG-G---------------------------------------------------------------------------GTGCTCCG-GGG-----------GGT-GGGTGTGGCCCCGGGGGACAGGTGC------------------------------------------------------------------------TAATTGAATTAGCAGGGT-C------CG---GGGAAAT--GGCACG------------------------------------G---------------CGATAA---AA-------------------------ACCACTGATTCCGTCACCTTGCAGA------CCGATAAGGAGAAAATCGATCCCCGCGGACGCACGCCTCTGAT
droRho1 scf7180000780106:238431-238647 + GGCACATCTGGCACAACGAACTGGAGCAGCTGCAGGCGGC------AGTCGACGAGGTGAAAAG------------------------------AAGGGTTGGG--TG---------------------------------------------------------------------------------------------CTCCA-GGG-----------GGT-GGGTGTGGCCCACGGGGACAGGTGC------------------------------------------------------------------------TAATTGAATTAGCAGGGT-C------TG---GGGAAAT--GGCACG------------------------------------G---------------CGATAA---AA-------------------------ACCACTGATTCCGTCACCTTGCAGA------ACGATAAGGAGAAAATCGATCCCCGCGGACGCACGCCCCTGAT
droBia1 scf7180000302292:1319338-1319562 + GGCACATCTGGCACAACGAGCTGGAGCAGCTGCAGGCGGC------CCTTGAGCAGGTGAAAAG------------------------------GG--GTTGG---TG---------------------------------------------------------------------------------------------CTCCGTGGG-GGGCGCGGGGCGT-GGGTGTGGCCCCCAGGGACAGGTGC------------------------------------------------------------------------TAATTGAATTAGCAGGGT-C------CG---GGGAAAT--GGCACG------------------------------------G---------------CGATAA---AA-------------------------ACCACTGATTCCGTCACCTTGCAGA------ACGATAAGGAGAAAATCGATCCCCGCGGCCGCACGCCCCTGAT
droTak1 scf7180000415991:537961-538167 - GGCACATCTGGCACAACGAACTGGAGGAGCTGCAGGCGGC------CATCGAGCAGGTGAAAAG------------------------------GGGG-----------------------------TTG---G---------------------------------------------------------------------------G-----------AGTGGGGTGTGGCCCCCTGGGACAGGTGC------------------------------------------------------------------------TAATTGAATTAGCAGGGC-A------CG---GGGAAAT--GGCACT------------------------------------G---------------CGATAA---AA-------------------------ACCACTGATTCCGTCACCTTGCAGA------ACGATAAGGAGAAAATCGATCCCCGCGGACGCACGCCCCTGAT
droEug1 scf7180000409663:285779-285995 + GGCACATCTGGCACAACGAACTGGAGCAGTTGCAGGCGGC------CATCGACCAGGTGAAAAG------------------------------AGGGGATGG---TG---------------------------------------------------------------------------------------------TTCCGTGGG-----------GGT-GGGTGTGGCCCCCGGGGACAGGTGC------------------------------------------------------------------------TAATTGAATTAGCAGGGT-C------CG---GGGAAAT--GACATG------------------------------------G---------------CGATAA---AA-------------------------ACCACTGATTCCGTCACATTTCAGA------ACGATAAGGAGAAAATCGATCCCCGCGGACGGACGCCGTTGAT
dm3 chr2R:15024289-15024505 - GGCACATCTGGCACAACGAACTGGAGCAGCTGCAGGCGGC------CATCGACCAGGTGAAAAG------------------------------GGGTGGTGG---TG---------------------------------------------------------------------------------------------CTCCATGGG-----------GGT-GGGTGTGGCCTCCGGGGACAGGTGC------------------------------------------------------------------------TAATTGAATTAGCAGGGC-A------CG---GGGAAGT--GACACT------------------------------------G---------------CGATAA---AA-------------------------CTTACTGATTCCGTCACCTTGCAGA------ACGATAAGGAGAAAATCGATCCCCGCGGCCGGACGCCACTGAT
droSim2 2r:15674693-15674909 - dsi_28410 GGCATATCTGGCACAACGAACTGGAGCAGCTGCAGGCGGC------CATCGACCAGGTGAAAAG------------------------------GGGAGGTGG---TG---------------------------------------------------------------------------------------------CTCCATGGG-----------GGT-GGGTGTGGCCTCCGGGGACAGGTGC------------------------------------------------------------------------TAATTGAATTAGCAGGGC-A------CG---GGGAAGT--GGCACT------------------------------------G---------------CGATAA---AA-------------------------CTCACTGATTCCGTCACCTTGCAGA------ACGATAAGGAGAAAATTGATCCCCGCGGCCGGACGCCACTGAT
droSec2 scaffold_1:12537330-12537546 - GGCATATCTGGCACAACGAACCGGAGCAGCTGCAGGCGGC------CATCGACCAGGTGAAAAG------------------------------GGGAGGTGG---TG---------------------------------------------------------------------------------------------CTCCATGGG-----------GGT-GGGTGTGGCCTCCGGGGACAGGTGC------------------------------------------------------------------------TAATTGAATTAGCAGGGC-A------CG---GGGAAGT--GGCGCT------------------------------------G---------------CGATAA---AA-------------------------CTCACTGATTCCGTCACCTTGCAGA------ACGATAAGGAGAAAATCGATCCCCGCGGCCGGACGCCACTGAT
droYak3 2R:14155855-14156071 + GGCACATCTGGCACAACGAACTGGAGCAGCTGCAGGCGGC------CATCGACCAGGTGAAAAG------------------------------GGGAGGTGG---TG---------------------------------------------------------------------------------------------CTCCATGGG-----------GGT-GGGTGTGGCCGCCGGGGACAGGTGC------------------------------------------------------------------------TAATTGAATTAGCAGGGC-A------CG---GGGAAAT--GGCACT------------------------------------G---------------CGATAA---AA-------------------------CTCACCGATTCCGTCACCTTGCAGA------ACGACAAGGAGAAAATCGATCCCCGCGGCCGGACGCCGCTGAT
droEre2 scaffold_4845:9223970-9224186 - GGCACATCTGGCACAACGAACTGGAGCAGCTGCAGGCGGC------CATCGACCAGGTGAAAAG------------------------------GGGTGGTGG---TG---------------------------------------------------------------------------------------------CTCCATGGG-----------GGT-GGGTGTGGCCCCCGGGGACAGGTGC------------------------------------------------------------------------TAATTGAATTAGCAGGGC-A------CG---GGGAAAT--GACACT------------------------------------G---------------CGATTA---AA-------------------------CTCACTGATTCCGTCACCTTGCAGA------ACGACAAGGAGAAAATCGATCCCCGCGGCCGGACGCCACTGAT
dp5 3:19747137-19747410 - dps_1329 GGCACATCTGGAACGGAGACGTGGAGCAGCTTCAGACCGAGCTACAAATTGACCAGGTAAATGG------------------------------TGGGTGA--GG-T------------GGGTGTGGTTG---TGGCTGGGC-TGTGATTCT----GGGAGAAGGAAAAGCCGGACAGGTGTGTGTGC----------------------------------------------------------GCAC------------------------------------------------------------------------TAATTGAATTAGCGCATT-T------CC---C--------------------------------GACAAACAACGGACG---GCAGAGAAATAAATTGTTAT------TGAACCATAAA----------------TGGCACAATTCGTCAACTTTCAGA------ATGATAAGGAAAAAATCGATCCACGGGGACGCACCCCCCTGAT
droPer2 scaffold_37:748448-748721 - dpe_1526 GGCACATCTGGAACGGAGACGTGGAGCAGCTTCAGACCGAGCTACAAATTGACCAGGTAAATGG------------------------------TGGGTGA--GG-T------------GGGTGTGGTTG---TGGCTGGGC-TGTGATTCT----GGCAGAAGGAAAAGCCGGACAGGTGTGTGTGC----------------------------------------------------------ACAC------------------------------------------------------------------------TAATTGAATTAGCGCATT-T------CC---C--------------------------------GACAAACAACGGACG---GCAGAGAAATAAATTGTTAT------TGAACCATAAA----------------TGGCACAATTCGTCAACTTTCAGA------ATGATAAGGAAAAAATCGATCCACGGGGACGCACCCCCCTGAT
droWil2 scf2_1100000004822:1704756-1705040 - dwi_2179 GGGAGATATGGAATGGCAATGTAGAGCAACTACAGCTGGAATTGCAAAAAGAACAGGTAAAACAAAAAAAAAAACAT---A--------------------AAG-A-GA------------------------------------------------GA----------------------------------------------ATGAGAGTGGGAGGTGGGT-GGGTGTGGCCTACG--TTTGGGCGCTAATTAAATTAGACTAATGTTGTCATTTTTTCTAATGCAACTAATACATATATATTGATATGTATATATTATTGATTCGGTTGATATCATTGGAATGTTTTT-ATG--------------------------------------------------------------------------------------------------------------------TTCGGTAGA------TTGATAAGGAAAAAATCGATCCGCGGGGACGAACGCCGCTTCT
droVir3 scaffold_13324:2671940-2672199 - GGCAGATTTGGAATGGGAACGTTGAAGAGCTGCAGCAACAATTGCAGACCGAACAGGTTTGTAG------------------------------TCGGCTG--GG-T------------GG-TTTGCTTGCTCTGCTTGCCCACCCAATTTTAACGGGGACAGG---CACAGGCACAGGCAGGTGTGC---------------------------------------------------------GCTAC------------------------------------------------------------------------TAATTGAATTAGTGCCCCCCAAATGTTTCG-ACG---------------AC---------------------------TGCAA---------------CAATAG---AACAA-------------CG------------TTAACAGCTCAACTTTCAGA------TTGATAAGGAAAAAATCGATCCGCGCGGCCGCACACCTTTGAT
droMoj3 scaffold_6496:14129942-14130224 + GGCAGATCTGGAATGGGAACGTTGAGGAGCTGCAACAGCAGTTGCTCACTGAACAGGTTTGTCATCGGTAGGGTGATTGA-TTGGCT------------------A-------------------------------------------------GGGAATGGG---AGCAGGGACAGGTGGGTGTGCGATGGTGTGGGTGA-CCGTGTG-----------TGT-GTGTGTGTT-TGTGTGT---ACTGC------------------------------------------------------------------------TAATTGAATTAGTGATTC---------------------TATTCC------------------AAAAACAAAAACAACA---G---------------CAATGA---CA---------ATAGCAATG------------TTAATAACTCAACTTTCAGA------TTGATAAAGAAAAAATCGATCCGCGGGGCCGCACACCATTGAT
droGri2 scaffold_15112:4804915-4805210 + GGCAGATCTGGAATGGCAACGCCGAGAAGCTGCAACAACAATTGCAGACCGACCAGGTGGGTGGTGGCTGATGGCAT---T--------------------GGG-T-GG---------------------GCCTGTATCTACATTCAGCTCTG---------------------------------------------------AGTGGGAGTGGCTGGTGAGG-GGCTGTGGAC--TGGGGGAAGCTAC------------------------------------------------------------------------TAATTGAATTAGTGCCCC---------------AAAAT--GATTCGCTGATAATAGCAATGATAACAACAGAAACAAC---------------------------AAAA-----AACAATAGCAATATT-----CTCA--GCCAAGTTCAACTTGCAGA------TTGATAAGGAAAAAATCGATCCACGGGGCCGGACACCTTTAAT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droAna3
GGCACATCTGGCACGGCGAGCTCGAGCAGCTGCAGGAGGC------CATCGACCAGGTGAGAGT------------------------------AGCGGTTGG---T---------------------------------------------------------------------------------------------------TG-G-----------GGTGGGGTGTGGCCC-TGCGGAAAAGTGC------------------------------------------------------------------------TAATTGAATTAGCGCGGG-T------TG---CGGAG------CACG---GC---------------------------TCTAG---------------CGATAA---TACAG-------------CCGAAACATTCTAATGATT-TGACATATTTCAGAACGAGAACGATAAGGAGAAAATCGATCCCCGTGGGCGGACTCCCCTGATSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
...............................................................................................GCGGTTGG---T---------------------------------------------------------------------------------------------------TG-G-----------GGTGGGG..............................................................................................................................................................................................................................................................................................................19133.00330001230
...............................................................................................GCGGTTGG---T---------------------------------------------------------------------------------------------------TG-G-----------GGTGGGGT.............................................................................................................................................................................................................................................................................................................2019.009000018
...............................................................................................GCGGTTGG---T---------------------------------------------------------------------------------------------------TG-G-----------GGTGGGGTGTGGCC.......................................................................................................................................................................................................................................................................................................2613.003000003
..................................................................................................GTTGG---T---------------------------------------------------------------------------------------------------TG-G-----------GGTGGGGTGTGG.........................................................................................................................................................................................................................................................................................................2112.002000002
.....ATCTGGCACGGCGAGCTCGAGCAGCTGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2812.002200000
....CATCTGGCACGGCGAGCTCGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001010000
...............................................................................................GCGGTTGG---T---------------------------------------------------------------------------------------------------TG-G-----------GGTGGGGTGTGGC........................................................................................................................................................................................................................................................................................................2511.001000001
..............................................................................................AGCGGTTGG---T---------------------------------------------------------------------------------------------------TG-G-----------GGTGGGGT.............................................................................................................................................................................................................................................................................................................2111.001000001
..................................................................................................GTTGG---T---------------------------------------------------------------------------------------------------TG-G-----------GGTGGGGTGTGGCC.......................................................................................................................................................................................................................................................................................................2311.001000010
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACGAGAACGATAAGGAGAA..............................2111.001010000
..................................................................................................GTTGG---T---------------------------------------------------------------------------------------------------TG-G-----------GGTGGGGTGTGGCCC-.....................................................................................................................................................................................................................................................................................................2411.001000001
......................................................................................................G---T---------------------------------------------------------------------------------------------------TG-G-----------GGTGGGGTGTGGCCC-TGCGG................................................................................................................................................................................................................................................................................................2511.001100000
..............................................................................................AGCGGTTGG---T---------------------------------------------------------------------------------------------------TG-G-----------GGTGGGGTGTGGC........................................................................................................................................................................................................................................................................................................2611.001000001
..............................................................................................AGCGGTTGG---T---------------------------------------------------------------------------------------------------TG-G-----------GGTGGGG..............................................................................................................................................................................................................................................................................................................2011.001000001
...................GCTCGAGCAGCTGCAGGAGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2030.331000010
..............................................................................................AGCGGTTGG---T---------------------------------------------------------------------------------------------------TG-G-----------GGTTT................................................................................................................................................................................................................................................................................................................1870.141000100
droBip1
GGCACATCTGGCACGGTGAGCTGGAGCAGCTGCAGGCGGC------CATCGACCAGGTGAGAGT------------------------------GGAGGGTGGG--T---------------------------------------------------------------------------------------------------TG-G-----------GGTGGGGTGTGGCCC-TGCGAAATGGTGC------------------------------------------------------------------------TAATTGAATTAGCGCAGG-T------TGCG-GGG--------CACG---AA---------------------------TGAGG---------------CGATAA---TACAA-------------CCAAAACAAGCTAATGATT-CGTCATATTTCAGAATGAGAACGATAAGGAAAAAATCGATCCCCGCGGGCGAACTCCCTTGATSizeHit CountTotal NormTotal
No Reads
droKik1
GGCACATCTGGCACAACGAACTGGAGCAGCTGCAGGCGGC------CATCGACCAGGTGAGTGA-----------------GGCGAAAGCGAGGAGGGGGTGG---CG---------------------------------------------------------------------------------------------GCGCACA-G-----------GGT-GGGTGTGGCCCCCAGGGCCAGGTGC------------------------------------------------------------------------TAATTGAATTAGCAGGGG-C------CG---GGGAATTCTAGCCAA------------------------------------T---------------TGATAA---CA-------------------------GCTAACGATT-CGTCATCTTTTAGA------ACGATAAGGAGAAAATCGATCCTCGCGGCCGGACGCCGCTGATSizeHit CountTotal NormTotal
No Reads
droFic1
GGCACATCTGGCACAACGAACTGGAGCAGCTGCAGGCGGC------CATCGACCAGGTGAAAAG-------------------------AGGGGCGGGGG------T------------------------------------------------------------------------------------------------------------------GGT-GGGTGTGGCCCCCGGGGACAGGTGC------------------------------------------------------------------------TAATTGAATTAGCAGGGT-T------CC-GGGGGAAAT--GTCATG------------------------------------GCAGGG----------AGATAATGAAA-------------------------ACCACTGATTCCGTCACCTTGCAGA------ACGATAAGGAGAAAATCGATCCCCGCGGACGTACGCCACTGATSizeHit CountTotal NormTotal
No Reads
droEle1
GGCACATCTGGCACAACGAACTGGAGCAGCTGCAGGCGGCATTGGCAGTCGACGAGGTGAAAAG------------------------------AAGGGTGGGG--TGCTCCGGGGGGTGG-G---------------------------------------------------------------------------GTGCTCCG-GGG-----------GGT-GGGTGTGGCCCCGGGGGACAGGTGC------------------------------------------------------------------------TAATTGAATTAGCAGGGT-C------CG---GGGAAAT--GGCACG------------------------------------G---------------CGATAA---AA-------------------------ACCACTGATTCCGTCACCTTGCAGA------CCGATAAGGAGAAAATCGATCCCCGCGGACGCACGCCTCTGATSizeHit CountTotal NormTotal
No Reads
droRho1
GGCACATCTGGCACAACGAACTGGAGCAGCTGCAGGCGGC------AGTCGACGAGGTGAAAAG------------------------------AAGGGTTGGG--TG---------------------------------------------------------------------------------------------CTCCA-GGG-----------GGT-GGGTGTGGCCCACGGGGACAGGTGC------------------------------------------------------------------------TAATTGAATTAGCAGGGT-C------TG---GGGAAAT--GGCACG------------------------------------G---------------CGATAA---AA-------------------------ACCACTGATTCCGTCACCTTGCAGA------ACGATAAGGAGAAAATCGATCCCCGCGGACGCACGCCCCTGATSizeHit CountTotal NormTotal
No Reads
droBia1
GGCACATCTGGCACAACGAGCTGGAGCAGCTGCAGGCGGC------CCTTGAGCAGGTGAAAAG------------------------------GG--GTTGG---TG---------------------------------------------------------------------------------------------CTCCGTGGG-GGGCGCGGGGCGT-GGGTGTGGCCCCCAGGGACAGGTGC------------------------------------------------------------------------TAATTGAATTAGCAGGGT-C------CG---GGGAAAT--GGCACG------------------------------------G---------------CGATAA---AA-------------------------ACCACTGATTCCGTCACCTTGCAGA------ACGATAAGGAGAAAATCGATCCCCGCGGCCGCACGCCCCTGATSizeHit CountTotal NormTotal
No Reads
droTak1
GGCACATCTGGCACAACGAACTGGAGGAGCTGCAGGCGGC------CATCGAGCAGGTGAAAAG------------------------------GGGG-----------------------------TTG---G---------------------------------------------------------------------------G-----------AGTGGGGTGTGGCCCCCTGGGACAGGTGC------------------------------------------------------------------------TAATTGAATTAGCAGGGC-A------CG---GGGAAAT--GGCACT------------------------------------G---------------CGATAA---AA-------------------------ACCACTGATTCCGTCACCTTGCAGA------ACGATAAGGAGAAAATCGATCCCCGCGGACGCACGCCCCTGATSizeHit CountTotal NormTotal
No Reads
droEug1
GGCACATCTGGCACAACGAACTGGAGCAGTTGCAGGCGGC------CATCGACCAGGTGAAAAG------------------------------AGGGGATGG---TG---------------------------------------------------------------------------------------------TTCCGTGGG-----------GGT-GGGTGTGGCCCCCGGGGACAGGTGC------------------------------------------------------------------------TAATTGAATTAGCAGGGT-C------CG---GGGAAAT--GACATG------------------------------------G---------------CGATAA---AA-------------------------ACCACTGATTCCGTCACATTTCAGA------ACGATAAGGAGAAAATCGATCCCCGCGGACGGACGCCGTTGATSizeHit CountTotal NormTotal
No Reads
dm3
GGCACATCTGGCACAACGAACTGGAGCAGCTGCAGGCGGC------CATCGACCAGGTGAAAAG------------------------------GGGTGGTGG---TG---------------------------------------------------------------------------------------------CTCCATGGG-----------GGT-GGGTGTGGCCTCCGGGGACAGGTGC------------------------------------------------------------------------TAATTGAATTAGCAGGGC-A------CG---GGGAAGT--GACACT------------------------------------G---------------CGATAA---AA-------------------------CTTACTGATTCCGTCACCTTGCAGA------ACGATAAGGAGAAAATCGATCCCCGCGGCCGGACGCCACTGATSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
...............................................................................................................................................................................................................GGG-----------GGT-GGGTGTGGCCTCCGGGGA...............................................................................................................................................................................................................................................................................................24111.00110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100100000000000000000000000000000000000000000000000000010020101000000000000011100000000000100000000000
..............................................................................................................................................................................................................TGGG-----------GGT-GGGTGTGGCCTCCGGGGA...............................................................................................................................................................................................................................................................................................25111.00110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000012000000100000100001000100
...........CACAACGAACTGGAGCAGCTGCAGG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000
....................................................................................................TGG---TG---------------------------------------------------------------------------------------------CTCCATGGG-----------GGT-GGGT.............................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................TAGCAGGGC-A------CG---GGGAAGT--GA......................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATCGATCCCCGCGGCCGGA..........2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGA------ACGATAAGGAGAAAATC..........................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAATCGATCCCCGCGGCCGG...........2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................AACTGGAGCAGCTGCAGGCG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................TGGG-----------GGT-GGGTGTGGCCTCCGGGG................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000001000000000000000000000000000000000000000000000000000000000000000
.....................TGGAGCAGCTGCAGGCGGC------C...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTGATTCCGTCACCTTGCAG..................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000100000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGATCCCCGCGGCCGGACGC.......2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....CATCTGGCACAACGAACTGGAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................TGG---TG---------------------------------------------------------------------------------------------CTCCATGGG-----------GGT-GGG..............................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................ATCGACCAGGTGAAAAG------------------------------GGGTG...............................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GA------ACGATAAGGAGAAAATC..........................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
......................GGAGCAGCTGCAGGCGGC------CATC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........CACAACGAACTGGAGCAGCTGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................CAGCTGCAGGCGGC------CATCGACC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A------ACGATAAGGAGAAAATCGA........................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000
......TCTGGCACAACGAACTGGAGCAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................GGG-----------GGT-GGGTGTGGCCTCCGGGGT...............................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................AA-------------------------CTTACTGATTCCGTCACCTTG.....................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............ACGAACTGGAGCAGCTGCAGGCGGC------CAT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATCGATCCCCGCGGCCGGACGC.......2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATCGATCCCCGCGGCCGGAC.........2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................CGAACTGGAGCAGCTGCAGGCGGC------CA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................GACCAGGTGAAAAG------------------------------GGGTGGTGG---T.......................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................ACT------------------------------------G---------------CGATAA---AA-------------------------CTTACTGATTCCA.............................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......TCTGGCACAACGAACTGGAGCA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GA------ACGATAAGGAGAAAATCGA........................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGA------ACGATAAGGAGAAAATCGAT.......................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................TTAGCAGGGC-A------CG---GGGAAGT--G.......................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100
...................................GCGGC------CATCGACCAGGTGAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........GCACAACGAACTGGAGCA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................CGACCAGGTGAAAAG------------------------------GGGTGGTGG---........................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000
..............................................................................................................................................................................................................TGGG-----------GGT-GGGTGTGGCCTCCGGGGACAG............................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................TGGG-----------GGT-GGGTGTGGCCTCCGGGGACA.............................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000
.................GAACTGGAGCAGCTGCAGGCGGC------....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCCCCGCGGCCGGACGC.......1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
...............................................................................................................................................................................................................GGG-----------GGT-GGGTGTGGCCTCCGGGG................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000
..............AACGAACTGGAGCAGCTGCAGGCGGC------C...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............ACGAACTGGAGCAGCTGCAGGCGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................TGGG-----------GGT-GGGTGTGGCCT......................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000
..................AACTGGAGCAGCTGCAGGCGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........GCACAACGAACTGGAGCAGCTGCA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................TAATTGAATTAGCAGGGC-A------CG---.................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000
.GCACATCTGGCACAACGAACTGGAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................ATGGG-----------GGT-GGGTGTGGCC.......................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
..........GCACAACGAACTGGAGCAGCTGCAGG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
....................CTGGAGCAGCTGCAGGCGGC------CA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAATCGATCCCCGCGGCCGGA..........2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............CAACGAACTGGAGCAGCTGCAGG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................ACTGGAGCAGCTGCAGGCG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATCGATCCCCGCGGCCGGA..........2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....CATCTGGCACAACGAACTGGAGCAGCT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................AGGTGAAAAG------------------------------GGGTGGTG............................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATCGATCCCCGCGGCCGGACGCC......2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
..............AACGAACTGGAGCAGCTGCAGGCGGC------....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCGATCCCCGCGGCCGGACGCCACT...2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................GCAGGGC-A------CG---GGGAAGT--GACACT------------------------------------G---------------CGA...........................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000
.........................................................TGAAAAG------------------------------GGGTGGTGG---TG---------------------------------------------------------------------------------------------A........................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAATCGATCCCCGCGGCC.............1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGCAGA------ACGATAAGGAGAA..............................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000
..................................................................................................................................................................................................................................................................................................................................TAATTGAATTAGCAGGGC-A------CG---GGG..............................................................................................................................................................................2411.0010000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................GG-----------GGT-GGGTGTGGCCTCCGGGGA...............................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGA------ACGATAAGGAGAAA.............................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
droSim2
GGCATATCTGGCACAACGAACTGGAGCAGCTGCAGGCGGC------CATCGACCAGGTGAAAAG------------------------------GGGAGGTGG---TG---------------------------------------------------------------------------------------------CTCCATGGG-----------GGT-GGGTGTGGCCTCCGGGGACAGGTGC------------------------------------------------------------------------TAATTGAATTAGCAGGGC-A------CG---GGGAAGT--GGCACT------------------------------------G---------------CGATAA---AA-------------------------CTCACTGATTCCGTCACCTTGCAGA------ACGATAAGGAGAAAATTGATCCCCGCGGCCGGACGCCACTGATSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAATTGATCCCCGCGGCC.............2012.00200200000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCACTGATTCCGTCACCTTG.....................................................2011.00100000000000100000
............ACAACGAACTGGAGCAGCTGCAGGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100100000000000000
.............................................................................................................................................................................................................ATGGG-----------GGT-GGGTGTGGCCTCCGGGGACAGG...........................................................................................................................................................................................................................................................................................3011.00100000010000000000
............ACAACGAACTGGAGCAGCTG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000000000001000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A------ACGATAAGGAGAAAATTGAT.......................2111.00100000000000001000
......TCTGGCACAACGAACTGG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00110000000000000000
................................................................................................................................................................................................................................................................................................................................................GGGC-A------CG---GGGAAGT--GGCAC...................................................................................................................................................................1911.00100000000001000000
droSec2
GGCATATCTGGCACAACGAACCGGAGCAGCTGCAGGCGGC------CATCGACCAGGTGAAAAG------------------------------GGGAGGTGG---TG---------------------------------------------------------------------------------------------CTCCATGGG-----------GGT-GGGTGTGGCCTCCGGGGACAGGTGC------------------------------------------------------------------------TAATTGAATTAGCAGGGC-A------CG---GGGAAGT--GGCGCT------------------------------------G---------------CGATAA---AA-------------------------CTCACTGATTCCGTCACCTTGCAGA------ACGATAAGGAGAAAATCGATCCCCGCGGCCGGACGCCACTGATSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
..............................................................................................................................................................................................................TGGG-----------GGT-GGGTGTGGCCTCCGGGGA...............................................................................................................................................................................................................................................................................................2513.0031110
...............................................................................................................................................................................................................GGG-----------GGT-GGGTGTGGCCTCCGGG.................................................................................................................................................................................................................................................................................................2211.0010001
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAATCGATCCCCGCGGCC.............1911.0011000
................................................................................................................................................................................................................GG-----------GGT-GGGTGTGGCCTCCGGGGA...............................................................................................................................................................................................................................................................................................2311.0010001
.............CAACGAACCGGAGCAGCTGCAGGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010100
.............CAACGAACCGGAGCAGCTGCAGGCGGC------....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010010
............................GCTGCAGGCGGC------CATCGACCA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0011000
..............................................................................................................................................................................................................TGGG-----------GGT-GGGTGTGGCCTCCGGGGACA.............................................................................................................................................................................................................................................................................................2711.0011000
....................................................................................................................................................................................................................................................................................................................................................................................................................................CGATAA---AA-------------------------CTCACTGATTCCGTCA..........................................................2411.0011000
droYak3
GGCACATCTGGCACAACGAACTGGAGCAGCTGCAGGCGGC------CATCGACCAGGTGAAAAG------------------------------GGGAGGTGG---TG---------------------------------------------------------------------------------------------CTCCATGGG-----------GGT-GGGTGTGGCCGCCGGGGACAGGTGC------------------------------------------------------------------------TAATTGAATTAGCAGGGC-A------CG---GGGAAAT--GGCACT------------------------------------G---------------CGATAA---AA-------------------------CTCACCGATTCCGTCACCTTGCAGA------ACGACAAGGAGAAAATCGATCCCCGCGGCCGGACGCCGCTGATSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.............................................................................................................................................................................................................................................................................................................................................................................................................................................AA-------------------------CTCACCGATTCCGTCACCTTGCAG..................................................2611.00110000000000
.............CAACGAACTGGAGCAGCTGCAGGCGGC------....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000010000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATCGATCCCCGCGGCCGGAC.........2111.00100000100000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCACCGATTCCGTCACCTTGCAG..................................................2311.00101000000000
droEre2
GGCACATCTGGCACAACGAACTGGAGCAGCTGCAGGCGGC------CATCGACCAGGTGAAAAG------------------------------GGGTGGTGG---TG---------------------------------------------------------------------------------------------CTCCATGGG-----------GGT-GGGTGTGGCCCCCGGGGACAGGTGC------------------------------------------------------------------------TAATTGAATTAGCAGGGC-A------CG---GGGAAAT--GACACT------------------------------------G---------------CGATTA---AA-------------------------CTCACTGATTCCGTCACCTTGCAGA------ACGACAAGGAGAAAATCGATCCCCGCGGCCGGACGCCACTGATSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
..........GCACAACGAACTGGAGCAGCTGCA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000010
GGCACATCTGGCACAACGAACTGGAGCA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0011000000
..................AACTGGAGCAGCTGCAGG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0011000000
dp5
GGCACATCTGGAACGGAGACGTGGAGCAGCTTCAGACCGAGCTACAAATTGACCAGGTAAATGG------------------------------TGGGTGA--GG-T------------GGGTGTGGTTG---TGGCTGGGC-TGTGATTCT----GGGAGAAGGAAAAGCCGGACAGGTGTGTGTGC----------------------------------------------------------GCAC------------------------------------------------------------------------TAATTGAATTAGCGCATT-T------CC---C--------------------------------GACAAACAACGGACG---GCAGAGAAATAAATTGTTAT------TGAACCATAAA----------------TGGCACAATTCGTCAACTTTCAGA------ATGATAAGGAAAAAATCGATCCACGGGGACGCACCCCCCTGATSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
............................................................ATGG------------------------------TGGGTGA--GG-T------------GGGTG......................................................................................................................................................................................................................................................................................................................................................................................................................1915.0050400010000
...............................................................G------------------------------TGGGTGA--GG-T------------GGGTGTGG...................................................................................................................................................................................................................................................................................................................................................................................................................1914.0040300001000
........................................................................................................G-T------------GGGTGTGGTTG---TGGCTGGG.....................................................................................................................................................................................................................................................................................................................................................................................................2113.0030100002000
..........................................................................................................T------------GGGTGTGGTTG---TGGCTGGG.....................................................................................................................................................................................................................................................................................................................................................................................................2013.0030200001000
..........................................................................................................T------------GGGTGTGGTTG---TGGCTGGGC-A..................................................................................................................................................................................................................................................................................................................................................................................................2212.0020200000000
..........................................................................................................T------------GGGTGTGGTTG---TGGCTGGGC-T..................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000001000
....CATCTGGAACGGAGACGTG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
............ACGGAGACGTGGAGCAGCT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
........................................................................................................G-T------------GGGTGTGGTTG---TGGCTGGGC-T..................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000001000
..........................................................................................................T------------GGGTGTGGTTG---TGGCTGGGC-TG.................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATCGATCCACGGGGACGCACCCCCCTG..2811.0010100000000
...................................................................................................GA--GG-T------------GGGTGTGGTTG---TGGC.........................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000001000
..........................................................................................................T------------GGGTGTGGTTG---TGGCTGGGC-C..................................................................................................................................................................................................................................................................................................................................................................................................2211.0010001000000
................................................................................................GGTGA--GG-T------------GGGTGTGGTTG---.............................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
..........................................................................................................T------------GGGTGTGGTTG---TGGCTGGGC-TA.................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100000000
.............................................................TGG------------------------------TGGGTGA--GG-T------------GGGTG......................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010100000000
..................................................................................................TGA--GG-T------------GGGTGTGGTTG---TGGCT........................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100000000
.....ATCTGGAACGGAGACGTGG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
...................................................................................................GA--GG-T------------GGGTGTGGTTG---TGGCTTC......................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000010000
.................GACGTGGAGCAGCTTCAGACCGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100000000
.......................................................................................................................GGGTGTGGTTG---TGGCTGGGC-T..................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
.GCACATCTGGAACGGAGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010100000000
.......................................................................................................................GGGTGTGGTTG---TGGCTGGG.....................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
........................................................................................................G-T------------GGGTGTGGTTG---TGGCTG.......................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
...............................................................G------------------------------TGGGTGA--GG-T------------GGGTGTGGA..................................................................................................................................................................................................................................................................................................................................................................................................................2020.5010100000000
droPer2
GGCACATCTGGAACGGAGACGTGGAGCAGCTTCAGACCGAGCTACAAATTGACCAGGTAAATGG------------------------------TGGGTGA--GG-T------------GGGTGTGGTTG---TGGCTGGGC-TGTGATTCT----GGCAGAAGGAAAAGCCGGACAGGTGTGTGTGC----------------------------------------------------------ACAC------------------------------------------------------------------------TAATTGAATTAGCGCATT-T------CC---C--------------------------------GACAAACAACGGACG---GCAGAGAAATAAATTGTTAT------TGAACCATAAA----------------TGGCACAATTCGTCAACTTTCAGA------ATGATAAGGAAAAAATCGATCCACGGGGACGCACCCCCCTGATSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
...............................................................G------------------------------TGGGTGA--GG-T------------GGGTGTGG...................................................................................................................................................................................................................................................................................................................................................................................................................1917.007010006
............................................................ATGG------------------------------TGGGTGA--GG-T------------GGGTG......................................................................................................................................................................................................................................................................................................................................................................................................................1914.004000013
..........................................................................................................T------------GGGTGTGGTTG---TGGCTGGGC-T..................................................................................................................................................................................................................................................................................................................................................................................................2213.003000012
...................................................................................................GA--GG-T------------GGGTGTGGTTG---TGGCT........................................................................................................................................................................................................................................................................................................................................................................................................2113.003000102
..............................................................................................TGGGTGA--GG-T------------GGGTGTGG...................................................................................................................................................................................................................................................................................................................................................................................................................1812.002000002
..............................................................................................TGGGTGA--GG-T------------GGGTGTGGTTG---TG...........................................................................................................................................................................................................................................................................................................................................................................................................2312.002000002
............................................................ATGG------------------------------TGGGTGA--GG-T------------GGGT.......................................................................................................................................................................................................................................................................................................................................................................................................................1812.002000020
...................................................................................................GA--GG-T------------GGGTGTGGTTG---TGGC.........................................................................................................................................................................................................................................................................................................................................................................................................2012.002000002
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAAGGAAAAAATCGATCCACGG.................2311.001010000
...................................................ACCAGGTAAATGG------------------------------TGGGTG..............................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001010000
............................................................ATGG------------------------------TGGGTGA--GG-T------------GGGTGT.....................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000100
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAATCGATCCACGGGGA..............2011.001010000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAAAATCGATCCACGGG................1911.001010000
........................................................................................................G-T------------GGGTGTGGTTG---TGGCTGGG.....................................................................................................................................................................................................................................................................................................................................................................................................2111.001000001
.............................................................TGG------------------------------TGGGTGA--GG-T------------GGGTG......................................................................................................................................................................................................................................................................................................................................................................................................................1811.001010000
...........................................................AATGG------------------------------TGGGTGA--GG-T------------GGGT.......................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000010
.................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCATAAA----------------TGGCACAATTCGTCAACTT......................................................2711.001010000
..............................................................................................TGGGTGA--GG-T------------GGGTGTGGTT.................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000001
..............................................................................................TGGGTGA--GG-T------------GGGTGTGGTTG---.............................................................................................................................................................................................................................................................................................................................................................................................................2111.001000010
........................................................................................................G-T------------GGGTGTGGTTG---TGGCTGGGC-C..................................................................................................................................................................................................................................................................................................................................................................................................2320.501000001
droWil2
GGGAGATATGGAATGGCAATGTAGAGCAACTACAGCTGGAATTGCAAAAAGAACAGGTAAAACAAAAAAAAAAACAT---A--------------------AAG-A-GA------------------------------------------------GA----------------------------------------------ATGAGAGTGGGAGGTGGGT-GGGTGTGGCCTACG--TTTGGGCGCTAATTAAATTAGACTAATGTTGTCATTTTTTCTAATGCAACTAATACATATATATTGATATGTATATATTATTGATTCGGTTGATATCATTGGAATGTTTTT-ATG--------------------------------------------------------------------------------------------------------------------TTCGGTAGA------TTGATAAGGAAAAAATCGATCCGCGGGGACGAACGCCGCTTCTSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.......................................................................................................................................................................................................................GAGGTGGGT-GGGTGTGGC........................................................................................................................................................................................................................................................................................................18134.00340210418
...................................................................................................................................................................................................................GTGGGAGGTGGGT-GGGTG............................................................................................................................................................................................................................................................................................................18116.001605038
...................................................................................................................................................................................................................GTGGGAGGTGGGT-GGGTGT...........................................................................................................................................................................................................................................................................................................19114.001400239
....................................................................................................................................................................................................................TGGGAGGTGGGT-GGGTGTG..........................................................................................................................................................................................................................................................................................................1916.00601104
...................................................................................................................................................................................................................GTGGGAGGTGGGT-GGGTGTGGC........................................................................................................................................................................................................................................................................................................2216.00600213
.......................................................................................................................................................................................................................GAGGTGGGT-GGGTGTGGCC.......................................................................................................................................................................................................................................................................................................1915.00500005
....................................................................................................................................................................................................................TGGGAGGTGGGT-GGGTGT...........................................................................................................................................................................................................................................................................................................1815.00500212
......................................................................................................................................................................................................................GGAGGTGGGT-GGGTGTGGC........................................................................................................................................................................................................................................................................................................1913.00300102
...................................................................................................................................................................................................................GTGGGAGGTGGGT-GGGTGTG..........................................................................................................................................................................................................................................................................................................2013.00300102
......................................................................................................................................................................................................................GGAGGTGGGT-GGGTGTGGCC.......................................................................................................................................................................................................................................................................................................2012.00200011
...................................................................................................................................................................................................................GTGGGAGGTGGGT-GGGTT............................................................................................................................................................................................................................................................................................................1851.20600042
......................AGAGCAACTACAGCTGGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00101000
....................................................................................................................................................................................................................TGGGAGGTGGGT-GGGTGTGGCC.......................................................................................................................................................................................................................................................................................................2211.00100100
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATCGATCCGCGGGGACGAACGCC......2511.00100010
.....................................................................................................................................................................................................................GGGAGGTGGGT-GGGTGTG..........................................................................................................................................................................................................................................................................................................1811.00100001
...........................AACTACAGCTGGAATTGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100010
...........................AACTACAGCTGGAATTGCA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00101000
...................................................................................................................................................................................................................GTGGGAGGTGGGT-GGGTGTGGCC.......................................................................................................................................................................................................................................................................................................2311.00100010
...................................................................................................................................................................................................................GTGGGAGGTGGGT-GGGTGTGGCCTA.....................................................................................................................................................................................................................................................................................................2511.00100100
...................................................................................................................................................................................................................GTGGGAGGTGGGT-GGGTA............................................................................................................................................................................................................................................................................................................1840.50200101
...................................................................................................................................................................................................................GTGGGAGGTGGGT-GGGTGA...........................................................................................................................................................................................................................................................................................................1930.33100100
........................................................................................................................................................................................................................AGGTGGGT-GGGTGTGGCA.......................................................................................................................................................................................................................................................................................................1860.17101000
....................................................................................................................................................................................................................TGGGAGGTGGGT-GGGTGG...........................................................................................................................................................................................................................................................................................................18150.07100010
droVir3
GGCAGATTTGGAATGGGAACGTTGAAGAGCTGCAGCAACAATTGCAGACCGAACAGGTTTGTAG------------------------------TCGGCTG--GG-T------------GG-TTTGCTTGCTCTGCTTGCCCACCCAATTTTAACGGGGACAGG---CACAGGCACAGGCAGGTGTGC---------------------------------------------------------GCTAC------------------------------------------------------------------------TAATTGAATTAGTGCCCCCCAAATGTTTCG-ACG---------------AC---------------------------TGCAA---------------CAATAG---AACAA-------------CG------------TTAACAGCTCAACTTTCAGA------TTGATAAGGAAAAAATCGATCCGCGCGGCCGCACACCTTTGATSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A------TTGATAAGGAAAAAATCGATCCGCGC.................2711.001000000000000000000000000000001000000000000000000000000000000000
......TTTGGAATGGGAACGTTGAAGAGCTGCA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001000000000000000000000000000000000000000000000000000000000000010
..........................................................TTGTAG------------------------------TCGGCTG--GG-T------------GG-T.......................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000100000000000000000000000000000000000000000000000000000
.......................GAAGAGCTGCAGCAACAATTGCAGAC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000000000000000100000000000000000000000000000000000000000000000
..............................................................................................................................CTTGCTCTGCTTGCCCACCCAATTT...........................................................................................................................................................................................................................................................................................................................................................................................2511.001010000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A------TTGATAAGGAAAAAATCGATC......................2211.001000000000000000000100000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................AC---------------------------TGCAA---------------CAATAG---AACAA-------------CG------------T....................................................................2111.001000000000000000000000010000000000000000000000000000000000000000
............................GCTGCAGCAACAATTGCAGACCGAACAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001000000000000000000000000000000010000000000000000000000000000000
...........AATGGGAACGTTGAAGAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000000010000000000000000000000000000000000000000000000000000000
.........GGAATGGGAACGTTGAAGAGCTGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000000010000000000000000000000000000000000000000000000000000000
..........................GAGCTGCAGCAACAATTGCAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2120.501001000000000000000000000000000000000000000000000000000000000000
..........................GAGCTGCAGCAACAATTGCAGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2220.501000100000000000000000000000000000000000000000000000000000000000
droMoj3
GGCAGATCTGGAATGGGAACGTTGAGGAGCTGCAACAGCAGTTGCTCACTGAACAGGTTTGTCATCGGTAGGGTGATTGA-TTGGCT------------------A-------------------------------------------------GGGAATGGG---AGCAGGGACAGGTGGGTGTGCGATGGTGTGGGTGA-CCGTGTG-----------TGT-GTGTGTGTT-TGTGTGT---ACTGC------------------------------------------------------------------------TAATTGAATTAGTGATTC---------------------TATTCC------------------AAAAACAAAAACAACA---G---------------CAATGA---CA---------ATAGCAATG------------TTAATAACTCAACTTTCAGA------TTGATAAAGAAAAAATCGATCCGCGGGGCCGCACACCATTGATSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
..................ACGTTGAGGAGCTGCAACAGCA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001001000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAATCGATCCGCGGGGC..............1911.001100000
....................................................................................................................................................................................................................................................................................................................................................................................................................G---------------CAATGA---CA---------ATAGCAATG------------T....................................................................1911.001010000
............................................................................................................................................................................................................CGTGTG-----------TGT-GTGTGTGTT-TG.....................................................................................................................................................................................................................................................................................................20200.051000010
droGri2
GGCAGATCTGGAATGGCAACGCCGAGAAGCTGCAACAACAATTGCAGACCGACCAGGTGGGTGGTGGCTGATGGCAT---T--------------------GGG-T-GG---------------------GCCTGTATCTACATTCAGCTCTG---------------------------------------------------AGTGGGAGTGGCTGGTGAGG-GGCTGTGGAC--TGGGGGAAGCTAC------------------------------------------------------------------------TAATTGAATTAGTGCCCC---------------AAAAT--GATTCGCTGATAATAGCAATGATAACAACAGAAACAAC---------------------------AAAA-----AACAATAGCAATATT-----CTCA--GCCAAGTTCAACTTGCAGA------TTGATAAGGAAAAAATCGATCCACGGGGCCGGACACCTTTAATSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/18/2015 at 03:23 AM