ID:

dan_1956

 Coordinate:

scaffold_13266:11878066-11878216 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-5.0 -4.7 -4.4

Flybase annnotation

exon [dana_GLEANR_13348:10]; CDS [Dana\GF13334-cds]; intron [Dana\GF13334-in]

No Repeatable elements found

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
TACTTCTATTATCGTACCTAGACACCAACCTAAATATACATATATAAAAATAATGTACTATATAAAGCAGCAGCAATCCAGCTTATACATTTACGTAGTGGAAAAAATAAAAAATACTTCTCCGGGGCGCGTTGCGTTTTAATCCACCCATCGATTCAAATGATCATCTCTTTATTCATGCGTCTCGTCTTTCGTATCCAGATCCGCCGGGCTGCATTGCCACCGAGCCCTTGGTCGTGGATTCCGGGCCC
********************************************************************************............((((..((((..................))))....))))......***************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total V106
head
 M044
female body
 V055
head
 V105
male body		 M058
embryo
 V039
embryo
................................................................................GCTTATACATTTACGTAGTGGAAAA.................................................................................................................................................. 25 0 1 3.00 3 3 0 0 0 0 0
......................................................GTACTATATAAAGCAGCAGCAATCC............................................................................................................................................................................ 25 0 1 3.00 3 3 0 0 0 0 0
..........ATCGTACCTAGACACCAACC............................................................................................................................................................................................................................. 20 0 1 3.00 3 3 0 0 0 0 0
.........TATCGTACCTAGACACCAACC............................................................................................................................................................................................................................. 21 0 1 2.00 2 2 0 0 0 0 0
.................................................................AGCAGCAGCAATCCAGCTTATACA.................................................................................................................................................................. 24 0 1 2.00 2 2 0 0 0 0 0
...TTCTATTATCGTACCTAGACACC................................................................................................................................................................................................................................. 23 0 1 2.00 2 1 1 0 0 0 0
...............................................AAATAATGTACTATATAAAGCAGCA................................................................................................................................................................................... 25 0 1 2.00 2 2 0 0 0 0 0
............................................................TATAAAGCAGCAGCAATCCAGCT........................................................................................................................................................................ 23 0 1 2.00 2 2 0 0 0 0 0
....TCTATTATCGTACCTAGACACC................................................................................................................................................................................................................................. 22 0 1 2.00 2 2 0 0 0 0 0
......TATTATCGTACCTAGACACCAACC............................................................................................................................................................................................................................. 24 0 1 2.00 2 0 1 0 1 0 0
................................................................................GCTTATACATTTACGTAGTGGAAA................................................................................................................................................... 24 0 1 2.00 2 2 0 0 0 0 0
.....CTATTATCGTACCTAGACACCAACC............................................................................................................................................................................................................................. 25 0 1 2.00 2 2 0 0 0 0 0
............................................................................................................AAAAAATACTTCTCCGGGGAA.......................................................................................................................... 21 2 1 1.00 1 0 1 0 0 0 0
...............................................................................AGCTTATACATTTACGTAGTGGAAAA.................................................................................................................................................. 26 0 1 1.00 1 1 0 0 0 0 0
.......ATTATCGTACCTAGACACCA................................................................................................................................................................................................................................ 20 0 1 1.00 1 0 0 1 0 0 0
............................................................TATGAAGCAGCAGCAATCC............................................................................................................................................................................ 19 1 1 1.00 1 1 0 0 0 0 0
............................................................................TCCAGCTTATACATTTACGTAGTG....................................................................................................................................................... 24 0 1 1.00 1 1 0 0 0 0 0
................................................................................GCTTATACATTTACGTAGTGGAA.................................................................................................................................................... 23 0 1 1.00 1 1 0 0 0 0 0
TACTTCTATTATCGTACCTAGACACC................................................................................................................................................................................................................................. 26 0 1 1.00 1 0 1 0 0 0 0
...........................................................ATATAAAGCAGCAGCAATCCAGCT........................................................................................................................................................................ 24 0 1 1.00 1 1 0 0 0 0 0
...............................................................................AGCTTATACATTTACGTAGTGGA..................................................................................................................................................... 23 0 1 1.00 1 1 0 0 0 0 0
.........................................................................................TTTACGTAGTGGAAAAAATAA............................................................................................................................................. 21 0 1 1.00 1 1 0 0 0 0 0
...TTCTATTATCGTACCTAGACACCA................................................................................................................................................................................................................................ 24 0 1 1.00 1 1 0 0 0 0 0
..............................................................TAAAGCAGCAGCAATCCAGCT........................................................................................................................................................................ 21 0 1 1.00 1 0 1 0 0 0 0
TACTTCTATTATCGTACCT........................................................................................................................................................................................................................................ 19 0 1 1.00 1 1 0 0 0 0 0
.................................................ATAATGTACTAGGTAAAGCA...................................................................................................................................................................................... 20 2 1 1.00 1 0 0 0 1 0 0
.........................................................CTATATAAAGCAGCAGCAATCA............................................................................................................................................................................ 22 1 1 1.00 1 1 0 0 0 0 0
.........................................................................................................AATAAAAAATACTTCTCCGGGGAT.......................................................................................................................... 24 2 1 1.00 1 0 0 1 0 0 0
...................................................AATGTACTATATAAAGCAGCAGCAATCCA........................................................................................................................................................................... 29 0 1 1.00 1 0 0 1 0 0 0
..............................................................................................................AAAATACTTCTCCGGGGA........................................................................................................................... 18 1 1 1.00 1 0 1 0 0 0 0
.................................................................AGCAGCAGCAATCCAGCTTATA.................................................................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0 0
.............................................................................................................AAAAATACTTCTCCGGGGA........................................................................................................................... 19 1 1 1.00 1 1 0 0 0 0 0
.........................................................CTATATAAAGCAGCAGCAATC............................................................................................................................................................................. 21 0 1 1.00 1 0 0 0 1 0 0
..................................................................GCAGCAGCAATCCAGCTTATACAT................................................................................................................................................................. 24 0 1 1.00 1 1 0 0 0 0 0
........TTATCGTACCTAGACACCAACC............................................................................................................................................................................................................................. 22 0 1 1.00 1 1 0 0 0 0 0
......................................................GTACTATATAAAGAAGCAGCAATCC............................................................................................................................................................................ 25 1 1 1.00 1 1 0 0 0 0 0
......TATTATCGTACCTAGACACCA................................................................................................................................................................................................................................ 21 0 1 1.00 1 1 0 0 0 0 0
............................................................TATAAAGCAGCAGCAATCC............................................................................................................................................................................ 19 0 1 1.00 1 1 0 0 0 0 0
.........................................................................................................AATAAAAAATACTTCTCCGGGGAA.......................................................................................................................... 24 2 1 1.00 1 0 0 0 1 0 0
................................................................AAGCAGCAGCAATCCAGCT........................................................................................................................................................................ 19 0 1 1.00 1 1 0 0 0 0 0
....................................................................................................................CTTCTCCGGGGCGCGTTGCGTT................................................................................................................. 22 0 1 1.00 1 0 1 0 0 0 0
..............................................................................CATCTTATACATTTACGTAGTGGAA.................................................................................................................................................... 25 1 1 1.00 1 1 0 0 0 0 0
................................................AATAATGTACTATATAAAGCAGAAGC................................................................................................................................................................................. 26 1 1 1.00 1 1 0 0 0 0 0
.......ATTATCGTACCTAGACACCAACC............................................................................................................................................................................................................................. 23 0 1 1.00 1 1 0 0 0 0 0
..............................................................TAAAGCAGCAGCAATCCAG.......................................................................................................................................................................... 19 0 1 1.00 1 0 1 0 0 0 0
.......................................................................................CATTTACGTAGTGGAAAAAATAAA............................................................................................................................................ 24 0 1 1.00 1 0 0 1 0 0 0
...............................................................................AGCTTATACATTTACGTAGT........................................................................................................................................................ 20 0 1 1.00 1 1 0 0 0 0 0
.........................................................................................TTTACGTAGTGGAAAAAATA.............................................................................................................................................. 20 0 1 1.00 1 1 0 0 0 0 0
................................................................AAGCAGCAGCAATCCATCTTA...................................................................................................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0
......TATTATCGTACCTAGACACC................................................................................................................................................................................................................................. 20 0 1 1.00 1 1 0 0 0 0 0
................................................................AAGCAGCAGCAATCCAGCTTA...................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0
..................................................................GCAGCAGCAATCCAGCTTAT..................................................................................................................................................................... 20 0 1 1.00 1 0 1 0 0 0 0
............................................................................................................................GAGCGCGCTCCGTTTTAATCC.......................................................................................................... 21 3 2 0.50 1 0 0 1 0 0 0
......................................................................................................................................................................................................................................TTGGTGGTGGATACCGGGCTC 21 3 4 0.25 1 0 0 1 0 0 0
............................................................................................ACGAAGTGGAAATAATAAAA........................................................................................................................................... 20 2 5 0.20 1 0 0 0 1 0 0
.........TATTGTACCAAGACACCA................................................................................................................................................................................................................................ 18 2 6 0.17 1 0 0 0 0 1 0
.........TAGCGTACCTTGATACCAA............................................................................................................................................................................................................................... 19 3 6 0.17 1 0 1 0 0 0 0
.......................................................................................................................................................................................................AGATCTCCCGGGCTGCA................................... 17 2 8 0.13 1 0 0 1 0 0 0
............................................................................................ACGTGGTGGAAAAAAAGAAAAA......................................................................................................................................... 22 3 14 0.07 1 0 0 0 1 0 0
............................................................................................................................................AATTCACCAATCGATTCA............................................................................................. 18 2 17 0.06 1 0 0 0 0 0 1
......................................................................................................................................................................................................................................TTGGGCGTGGGTTACGGGC.. 19 3 20 0.05 1 0 0 1 0 0 0
......................CACCAACCAGAATATCCAT.................................................................................................................................................................................................................. 19 3 20 0.05 1 0 0 1 0 0 0
............................................................................................ACGTGGTGGAAAAAAAAAAA........................................................................................................................................... 20 2 20 0.05 1 1 0 0 0 0 0

Anti-sense strand reads

ATGAAGATAATAGCATGGATCTGTGGTTGGATTTATATGTATATATTTTTATTACATGATATATTTCGTCGTCGTTAGGTCGAATATGTAAATGCATCACCTTTTTTATTTTTTATGAAGAGGCCCCGCGCAACGCAAAATTAGGTGGGTAGCTAAGTTTACTAGTAGAGAAATAAGTACGCAGAGCAGAAAGCATAGGTCTAGGCGGCCCGACGTAACGGTGGCTCGGGAACCAGCACCTAAGGCCCGGG
*****************************************************************************************************************............((((..((((..................))))....))))......******************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total V055
head
 M058
embryo
 M044
female body
.........................................................................................................................GGCCGCGCGCAACGAAGAATTA............................................................................................................ 22 3 1 1.00 1 1 0 0
.....................................................................................................TTTATTATTTTTTAGGAAGAGG................................................................................................................................ 22 2 3 0.33 1 0 1 0
.......................................................................................................................................................GGTAAGTTTACCAGTAGAAAAA.............................................................................. 22 3 3 0.33 1 0 0 1
..............................................................................................................................................................................CAGTACGAAGAGCAGAAA........................................................... 18 2 6 0.17 1 0 1 0
....................................................................................................................GAAGAGGCCCTGGGCAACC.................................................................................................................... 19 3 17 0.06 1 1 0 0
........................................................................................................................................................................CGAAACGAGTACGCAGAGC................................................................ 19 3 20 0.05 1 0 1 0
...........AGCATGGATGTTTGGATGG............................................................................................................................................................................................................................. 19 3 20 0.05 1 1 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droAna3 scaffold_13266:11878016-11878266 + dan_1956 TACT---TCTATT------------------------ATCGTACCTAGACACCAACCTAAATATACATATATAAAAATAATGTACTATATAAAGCAGCAGCAATCCAGCTTATACATTTACGTAGTGGA---------AA--------------AAATAAAAAA--TACTTCTCCGGGGCGCGTTGCGTTTTAATCCA-----------------------------CCCATCG--------------------------------------------------------------------------------------A------T-TCA--AATGATCATCTCTTTATTCATG----CGTCTCGT--CTTTC-----------------GTA---TCCAGATCCGCCGGGCTGCATTGCCACCGAGCCCTTGGTCGTGGATTCCGGGCCC
droBip1 scf7180000396547:599406-599667 - TACG---TTTATT------------------------ATCGTACCTATACACC-ACCTAAATATACATATATAAAAATAATGTACTATATAAAGCAGCAGCAATCCAGCTTATACATTTACGTAGTGGA---------A---------------AAATAAAAAA--TACTTCTCCGGGGCGCGTTGCGTTTTAATCAA-----------------------------CCCATT---------------------------------CCAA-----CCC--------CA---------------------C-CTCCTCTT--------------TAATGATCACCTCTTTATTCACG----TGTCTCAT--CTCTC-----------------GAA---TCCAGATCCTCCGGGCTGCATTGCCACCGAGCCATTGGTCGTGGATTCCGGCCCC
droKik1 scf7180000302385:1078776-1079029 - TACT---TTTATT------------------------ATCGTACCT------------------ACATATAT--AAATAATGTATTATATAAAGCA-CAGCAATCCAGCTTATACATTTACGTAGTGGA---------AACAAGA---------AAATAAAAAATATATTTCTCCGGGGCGTAAAGCGTTTTAATTGAGG------------------------CCATCCATTT-------------AC---CTCTAACT-----TCCATACCTCTCG-----------------------------------------AAGCCTCATTTCATT------------------TACA----CATCTTCT--CTCTT-----------------G------CCAGATCCCCCGGGTTGCATTTCCACGGAGCCCCTGGTCGTTGACTCCGGACCC
droFic1 scf7180000453948:1097554-1097806 - TACT---TTTATT------------------------ATCGTACCT------------------ACATATAT--AAATAATGTATTATATAAAGCA-CAGCAATCCAGCTTATACATTTACGTAGTGGA---------AACAAGA---------AAATAAAAAA--TATTTCTCCGGGGCGTAACGAGTTTTAATTGAGG------------------------TCAACCT--AAGAT--------------------------------------CT--------GT-CAC-----------------CAGCCCAT-TGAACCGCAT-TCATT------------------TACG----ATTTTGTT--TGTAT----------------ATCATCCTTCAGATCCACCGGGTTGCATTTCCACCGAGCCACTGGTCGTTGATTCCGGACCC
droEle1 scf7180000491107:851237-851480 - TACT---TTTATT--------------------------------------------------------------AATAATGTATTATATAAAGCA-CAGCAATCCAGCTTATACATTTACGTAGTGGA---------AACAAGA---------AAATAAAAAATATATTTCTCCGGGGCGTGAAGAGTTTTAATTGAGG------------------------TCACCCATTGAAATACACCAT-------------------------------TT--------GC----ATTT---------------GCCCATTTGAGTGTCAT-TCATT------------------TACG----AGTTTTGT--TTTG------------------CCATCCCTCAGATCCACCGGGTTGCATTTCCACCGAGCCCCTGGTCGTCGATTCCGGACCA
droRho1 scf7180000779911:249811-250041 + TACT---TTTATT--------------------------------------------------------------AATAATGTATTATATAAAGCA-CAGCAATCCAGCTTATACATTTACGTAGTGGA---------AACAAGA---------AAATAAAAAA--TATTTCTCCGGGGCGTAAAGAGTTTTAATTGAGG------------------------TCATCTT--GAGAT--------------------------------------AC--------AC---C-----------------ATTCCCATTTGAGTCTCAT-TCATT------------------TACG----AGTTTTCT--CTG-------------------CCATCCCTCAGATCCACCGGGTTGCATTTCCACCGAACCACTGGTCGTTGATTCCGGACCC
droBia1 scf7180000302292:2021473-2021729 - TACT---TTTATT------------------------ATCGTATC-------------------ACATATAT--AAATAATGTATTATATAAAGCA-CAGCAATCCAGCTTATACATTTACGTAGTGGA---------AACAAGA---------AAATAAAAAA--TATTTCTCCGGGGCGTAAAGAGTTTTAATTGAGG------------------------TCATCCC--AAGAT--------------------------------------GC--------AGCATC-----------------GAGTCCATTTAAGCCTCAT-TCATT------------------TACG----ATTCTTTTT-TTCGT------------G--TACCATCCCTCAGATCCACCGGGTTGCATTTCCACCGAACCCCTGGTCGTTGACTCCGGACCC
droTak1 scf7180000415795:714728-714973 + TACT---TTTATT------------------------ATCGTACCT------------------ACATATAT--AAATAATGTATTATATAAAGCA-CAGCAATCCAGCTTATACATTTACGTAGTGGA---------AACAAGA---------AAATAAAAAA--TATTTCTCCGGGGCGTAAAGAGTTTTAATTGAGG------------------------TCCATCT--AT------------------------------------------------------------------------GAG-AACCATTTGATCCTCAT-TCATT------------------TACG----AGTGTTTTTTTTGTA-----------------CCATCCCTCAGATCCACCCGGTTGCATTTCCACCGAACCACTGGTCGTTGATTCCGGACCC
droEug1 scf7180000409672:757581-757829 - TACT---TTTATT------------------------AACGTACCT------------------ACATATAT--AAATAATGTATTATATAAAGCA-CAGCAATCCAGCTTATACATTTACGTAGTGGA---------AACAAGA---------AAATAAAAAA--TATTTCTCCGGGGCGTAAAGCGTTTTAATTGAGG------------------------TCGTACT--AAG-----------------------T--------------------------AGCATA-----------------GTTCCCATTTGGACTTCAT-TCATT------------------TAAG----AATCTTTT--CTA-------------------CCATCCCTCAGATCCACCGGGTTGCATTTCCACCGAACCACTGGTCGTTGATTCCGGACCC
dm3 chr2R:11846773-11847011 - TACT---TTTATT------------------------A---------------------------------T--AAATAATGTATTATATAAAGCA-CAGCAATCCAGCTTATACATTTACGTAGTGGA---------AACAAGA---------AAATAAAAAA--TATTTCTCCGGGGCGTAAAGAGTTTTACTTGAGG------------------------TCACCTA--ACTAT--------------------------------------CC--------ACGCCC-----------------AATCCCATTTGAGCCTCAT-TCATT------------------TATC----AGTTTTCT--CTCAT-----------------CCATCCCTCAGATCCACCGGGTTGCATATCCACCGAGCCACTGGTCGTGGATTCCGGACCC
droSim2 2r:12516900-12517132 - TACT---TTTATT------------------------A---------------------------------T--AAATAATGTATTATATAAAGCA-CAGCAATCCAGCTTATACATTTACGTAGTGGA---------AACAAGA---------AAATAAAAAA--TATTTCTCCGGGGCGTAAAGAGTTTTACTTGAGG------------------------TCACCTA--ACTAT--------------------------------------CC--------GC-----------------------GCCCATTTGAGCCTCGT-TCATT------------------TATC----AGTTTTCT--CTCAT-----------------CCATCCCTCAGATCCACCGGGTTGCATTTCCACCGAGCCACTGGTCGTGGATTCCGGACCC
droSec2 scaffold_1:9346776-9347008 - TACT---TTTATT------------------------A---------------------------------T--AAATAATGTATTATATAAAGCA-CAGCAATCCAGCTTATACATTTACGTAGTGGA---------AACAAGA---------AAATAAAAAA--TATTTCTCCGGGGCGTAAAGAGTTTTACTTGAGG------------------------TCACCTA--ACTAT--------------------------------------CC--------AC-----------------------GCCCATTTGAGCCTCGT-TCATT------------------TATC----AGTTTTCT--CTCAT-----------------CCATCCCTCAGATCCACCGGGTTGCATTTCCACCGAGCCACTGGTCGTGGATTCCGGACAC
droYak3 2R:17135132-17135387 + TACT---TTTATT------------------------ATCGTACCT------------------ACATATAT--AAATAATGTATTATATAAAGCA-CAGCAATCCAGCTTATACATTTACGTAGTGGA---------AACAAGA---------AAATAAAAAA--TATTTCTCCGGGGCGTAAAGACTTTTACTTGAGG------------------------TCACCTT--AGTAT--------------------------------------CC--------ACTCCCATTC---------------ACCCACTTGAGCCTCAT-TCATT------------------TACG----ACTTTTCT--CTCAT-----------------CCATCCCTCAGATCCACCGGGTTGCATTTCCACCGAGCCACTGGTCGTGGATTCCGGACCC
droEre2 scaffold_4845:14011011-14011263 + TACT---TTTATT------------------------ATCGTACCT------------------ACATATAT--AAATAATGTATTATATAAAGCA-CAGCAATCCAGCTTATACATTTACGTAGTGGA---------AACAAGA---------AAATAAAAAA--TATTTCTCCGGGGCGTAAAGAGTTTTACTTGAGG------------------------TCGCCCT--AATAT--------------------------------------CC--------ACTCCC-----------------GCCCCCATTTGAGCC-CAT-TCATT------------------TACC----AGTTTTCT--CTCAT-----------------CCATCCCTCAGATCCACCGGGTTGCATTTCCACCGAGCCACTGGTCGTGGACTCCGGACCC
dp5 3:18979290-18979573 + TACT---TTTATT------------------------ATCGTA--------------------------TAT--AAATAATGTATTATTTAAAGCA-CAGCAATCCAGCTTATACATTTACGTAGTGGAA--------AACAAGA---------AAATAAAAAA-ATATTTCTCCGGGGCGTACTGTCTTTCATTTGAGGATCGGATCTCTTGCGGTGTATATACCACCCA--ACCCT--------------------------------------CC--------CT-----TCCATCTACAATCTG----------TGCACCTCAT-TCAA----------------------T----TGTTTTTT--CTGTTGTTTTTTTTTTTG---CCCACTCTCCAGATCCCCCTGGCTGCATATCCACCGAACCTCTGGTCGTCGACTCCGGACCC
droPer2 scaffold_242:10993-11276 + TACT---TTTATT------------------------ATCGTA--------------------------TAT--AAATAATGTATTATTTAAAGCA-CAGCAATCCAGCTTATACATTTACGTAGTGGAA--------AACAAGA---------AAATAAAAAA-ATATTTCTCCGGGGCGTACTGTCTTTCATTTGAGGATCGGATCTCTTGCGGTGTATATACCACCCA--CCCCT--------------------------------------CC--------CT-----TCCATCTACAATCTG----------TGCACCTCAT-TCAA----------------------T----TGTTTTTT--CTGTTGTTTTTGTTTTTG---CCCACTCTCCAGATCCCCCTGGCTGCATATCCACCGAACCTCTGGTCGTCGACTCCGGACCC
droWil2 scf2_1100000004558:863305-863587 - dwi_1489 TACT---TTTACTACTTTATTTTATTTATCATATTTTATCGAA--------------------------------TATAATGTATTATATAAAGCA-CAGCAATCCAGCTTATACATTTACGTAGTGAA---------AACAAGAAAAAAACAAAAATAAAAAAT-GAATTCTCCGGGGCGTAATGAGTTTGATTGGATG------------------------GT----------------TAAATGC---CTTAAA-TAGAATTCCAAACT---GTTTCCTTGACT----TTTT---------------GCCTAAATA-----TGT-ACATA------------------TATG----ATTTTGTT------------------------------TATAGACCCACCAGGTTGCATATCGACTGAACCGTTGGTTGTCGATTCCGGACCC
droVir3 scaffold_12875:17281284-17281535 - dvi_7452 TACTTATTTTATT------------------------ATCGTA--------------------------TAC--AAATAGCGTATTATATAAAGCA-CAACAATCCAGCTTATACATTTACGTAGTCGAAAAAAAAAAAACAAGA---------AAATAAAATATATATTTCTCCGGGGCGTAATGCGTTTGATTTC-------------------------------------------------------------------------------CC--------AT-----------------------GCCCCCTCAAT-------CCA--AACA------TCATTATTTATGCAAAACTCTTTG--C-CAC-----------CTCACACTTTCCCCTAGATCCACCTGGCTGCATATCAACCGAACCGCTCGTCGTTGACTCCGGACCC
droMoj3 scaffold_6496:10728929-10729171 + TACTTATTTTATT------------------------ATGGTA--------------------------TAC--AAATAGCGTATTATATAAAGCA-CAACAATCCAGCTTATACATTTACGTAGTCGAAAAAA-AAAAACAAGA---------AAATAAAATATATATTTCTCCGGGGCGTATTGTGTTTAATTTA------------------------------CC-ATGG-C------CAAT-GATCTATT-----------------------------------------------------------TAATTGATGC-AAT-ATATT------------------TG----------------C-ATC-----------TTCACAA-TTCACACAGATCCACCTGGCTGTATATCCACGGAGCCGCTGGTCGTTGACTCTGGACCC
droGri2 scaffold_15245:16797080-16797315 - TACTTATTTTATT------------------------ATGGTA--------------------------TAC--AAATAGCGTATTATATAAAGCA-CAGCAATCCAGCTTATACATTTACGTAGTCGA---------AAAAA----AAAACGAAAATAAAATATATATTTCTCCGGGGCGTATTGTGTTTGATTTG------------------------------CCCAC-A-------------------------------------ATTATCC--------GA---------------------G-TTCCATTTG-----------ATT------------------TATG----CCGC--CT--CCCAC-----------T-----TCACACTCTAGATCCACCTGCTGGCATATCCACCGAACCGCTGGTGGTCGACTCCGGACCC

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droAna3
TACT---TCTATT------------------------ATCGTACCTAGACACCAACCTAAATATACATATATAAAAATAATGTACTATATAAAGCAGCAGCAATCCAGCTTATACATTTACGTAGTGGA---------AA--------------AAATAAAAAA--TACTTCTCCGGGGCGCGTTGCGTTTTAATCCA-----------------------------CCCATCG--------------------------------------------------------------------------------------A------T-TCA--AATGATCATCTCTTTATTCATG----CGTCTCGT--CTTTC-----------------GTA---TCCAGATCCGCCGGGCTGCATTGCCACCGAGCCCTTGGTCGTGGATTCCGGGCCCSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
...........................................................................................................GCTTATACATTTACGTAGTGGA---------AA--------------A..........................................................................................................................................................................................................................................................................................................2513.003000003
.................................................................................GTACTATATAAAGCAGCAGCAATCC...........................................................................................................................................................................................................................................................................................................................................................2513.003000003
.....................................ATCGTACCTAGACACCAACC............................................................................................................................................................................................................................................................................................................................................................................................................2013.003000003
............T------------------------ATCGTACCTAGACACCAACC............................................................................................................................................................................................................................................................................................................................................................................................................2112.002000002
............................................................................................AGCAGCAGCAATCCAGCTTATACA.................................................................................................................................................................................................................................................................................................................................................2412.002000002
...T---TCTATT------------------------ATCGTACCTAGACACC................................................................................................................................................................................................................................................................................................................................................................................................................2312.002100001
..........................................................................AAATAATGTACTATATAAAGCAGCA..................................................................................................................................................................................................................................................................................................................................................................2512.002000002
.......................................................................................TATAAAGCAGCAGCAATCCAGCT.......................................................................................................................................................................................................................................................................................................................................................2312.002000002
.......TCTATT------------------------ATCGTACCTAGACACC................................................................................................................................................................................................................................................................................................................................................................................................................2212.002000002
.........TATT------------------------ATCGTACCTAGACACCAACC............................................................................................................................................................................................................................................................................................................................................................................................................2412.002100010
...........................................................................................................GCTTATACATTTACGTAGTGGA---------AA--------------...........................................................................................................................................................................................................................................................................................................2412.002000002
........CTATT------------------------ATCGTACCTAGACACCAACC............................................................................................................................................................................................................................................................................................................................................................................................................2512.002000002
..............................................................................................................................................................AAAAAA--TACTTCTCCGGGGAA................................................................................................................................................................................................................................................................................2111.001100000
..........................................................................................................AGCTTATACATTTACGTAGTGGA---------AA--------------A..........................................................................................................................................................................................................................................................................................................2611.001000001
..........ATT------------------------ATCGTACCTAGACACCA...............................................................................................................................................................................................................................................................................................................................................................................................................2011.001000100
.......................................................................................................TCCAGCTTATACATTTACGTAGTG......................................................................................................................................................................................................................................................................................................................................2411.001000001
...........................................................................................................GCTTATACATTTACGTAGTGGA---------A..........................................................................................................................................................................................................................................................................................................................2311.001000001
TACT---TCTATT------------------------ATCGTACCTAGACACC................................................................................................................................................................................................................................................................................................................................................................................................................2611.001100000
......................................................................................ATATAAAGCAGCAGCAATCCAGCT.......................................................................................................................................................................................................................................................................................................................................................2411.001000001
..........................................................................................................AGCTTATACATTTACGTAGTGGA---------...........................................................................................................................................................................................................................................................................................................................2311.001000001
....................................................................................................................TTTACGTAGTGGA---------AA--------------AAATAA.....................................................................................................................................................................................................................................................................................................2111.001000001
...T---TCTATT------------------------ATCGTACCTAGACACCA...............................................................................................................................................................................................................................................................................................................................................................................................................2411.001000001
.........................................................................................TAAAGCAGCAGCAATCCAGCT.......................................................................................................................................................................................................................................................................................................................................................2111.001100000
TACT---TCTATT------------------------ATCGTACCT.......................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000001
....................................................................................CTATATAAAGCAGCAGCAATCA...........................................................................................................................................................................................................................................................................................................................................................2211.001000001
...........................................................................................................................................................AATAAAAAA--TACTTCTCCGGGGAT................................................................................................................................................................................................................................................................................2411.001000100
..............................................................................AATGTACTATATAAAGCAGCAGCAATCCA..........................................................................................................................................................................................................................................................................................................................................................2911.001000100
................................................................................................................................................................AAAA--TACTTCTCCGGGGA.................................................................................................................................................................................................................................................................................1811.001100000
............................................................................................AGCAGCAGCAATCCAGCTTATA...................................................................................................................................................................................................................................................................................................................................................2211.001000001
...............................................................................................................................................................AAAAA--TACTTCTCCGGGGA.................................................................................................................................................................................................................................................................................1911.001000001
....................................................................................CTATATAAAGCAGCAGCAATC............................................................................................................................................................................................................................................................................................................................................................2111.001000010
.............................................................................................GCAGCAGCAATCCAGCTTATACAT................................................................................................................................................................................................................................................................................................................................................2411.001000001
...........TT------------------------ATCGTACCTAGACACCAACC............................................................................................................................................................................................................................................................................................................................................................................................................2211.001000001
.........TATT------------------------ATCGTACCTAGACACCA...............................................................................................................................................................................................................................................................................................................................................................................................................2111.001000001
.......................................................................................TATAAAGCAGCAGCAATCC...........................................................................................................................................................................................................................................................................................................................................................1911.001000001
...........................................................................................................................................................AATAAAAAA--TACTTCTCCGGGGAA................................................................................................................................................................................................................................................................................2411.001000010
...........................................................................................AAGCAGCAGCAATCCAGCT.......................................................................................................................................................................................................................................................................................................................................................1911.001000001
........................................................................................................................................................................CTTCTCCGGGGCGCGTTGCGTT.......................................................................................................................................................................................................................................................................2211.001100000
..........ATT------------------------ATCGTACCTAGACACCAACC............................................................................................................................................................................................................................................................................................................................................................................................................2311.001000001
.........................................................................................TAAAGCAGCAGCAATCCAG.........................................................................................................................................................................................................................................................................................................................................................1911.001100000
..................................................................................................................CATTTACGTAGTGGA---------AA--------------AAATAAA....................................................................................................................................................................................................................................................................................................2411.001000100
..........................................................................................................AGCTTATACATTTACGTAGT.......................................................................................................................................................................................................................................................................................................................................2011.001000001
....................................................................................................................TTTACGTAGTGGA---------AA--------------AAATA......................................................................................................................................................................................................................................................................................................2011.001000001
.........TATT------------------------ATCGTACCTAGACACC................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000001
...........................................................................................AAGCAGCAGCAATCCAGCTTA.....................................................................................................................................................................................................................................................................................................................................................2111.001000001
.............................................................................................GCAGCAGCAATCCAGCTTAT....................................................................................................................................................................................................................................................................................................................................................2011.001100000
droBip1
TACG---TTTATT------------------------ATCGTACCTATACACC-ACCTAAATATACATATATAAAAATAATGTACTATATAAAGCAGCAGCAATCCAGCTTATACATTTACGTAGTGGA---------A---------------AAATAAAAAA--TACTTCTCCGGGGCGCGTTGCGTTTTAATCAA-----------------------------CCCATT---------------------------------CCAA-----CCC--------CA---------------------C-CTCCTCTT--------------TAATGATCACCTCTTTATTCACG----TGTCTCAT--CTCTC-----------------GAA---TCCAGATCCTCCGGGCTGCATTGCCACCGAGCCATTGGTCGTGGATTCCGGCCCCSizeHit CountTotal NormTotal
No Reads
droKik1
TACT---TTTATT------------------------ATCGTACCT------------------ACATATAT--AAATAATGTATTATATAAAGCA-CAGCAATCCAGCTTATACATTTACGTAGTGGA---------AACAAGA---------AAATAAAAAATATATTTCTCCGGGGCGTAAAGCGTTTTAATTGAGG------------------------CCATCCATTT-------------AC---CTCTAACT-----TCCATACCTCTCG-----------------------------------------AAGCCTCATTTCATT------------------TACA----CATCTTCT--CTCTT-----------------G------CCAGATCCCCCGGGTTGCATTTCCACGGAGCCCCTGGTCGTTGACTCCGGACCCSizeHit CountTotal NormTotal
No Reads
droFic1
TACT---TTTATT------------------------ATCGTACCT------------------ACATATAT--AAATAATGTATTATATAAAGCA-CAGCAATCCAGCTTATACATTTACGTAGTGGA---------AACAAGA---------AAATAAAAAA--TATTTCTCCGGGGCGTAACGAGTTTTAATTGAGG------------------------TCAACCT--AAGAT--------------------------------------CT--------GT-CAC-----------------CAGCCCAT-TGAACCGCAT-TCATT------------------TACG----ATTTTGTT--TGTAT----------------ATCATCCTTCAGATCCACCGGGTTGCATTTCCACCGAGCCACTGGTCGTTGATTCCGGACCCSizeHit CountTotal NormTotal
No Reads
droEle1
TACT---TTTATT--------------------------------------------------------------AATAATGTATTATATAAAGCA-CAGCAATCCAGCTTATACATTTACGTAGTGGA---------AACAAGA---------AAATAAAAAATATATTTCTCCGGGGCGTGAAGAGTTTTAATTGAGG------------------------TCACCCATTGAAATACACCAT-------------------------------TT--------GC----ATTT---------------GCCCATTTGAGTGTCAT-TCATT------------------TACG----AGTTTTGT--TTTG------------------CCATCCCTCAGATCCACCGGGTTGCATTTCCACCGAGCCCCTGGTCGTCGATTCCGGACCASizeHit CountTotal NormTotal
No Reads
droRho1
TACT---TTTATT--------------------------------------------------------------AATAATGTATTATATAAAGCA-CAGCAATCCAGCTTATACATTTACGTAGTGGA---------AACAAGA---------AAATAAAAAA--TATTTCTCCGGGGCGTAAAGAGTTTTAATTGAGG------------------------TCATCTT--GAGAT--------------------------------------AC--------AC---C-----------------ATTCCCATTTGAGTCTCAT-TCATT------------------TACG----AGTTTTCT--CTG-------------------CCATCCCTCAGATCCACCGGGTTGCATTTCCACCGAACCACTGGTCGTTGATTCCGGACCCSizeHit CountTotal NormTotal
No Reads
droBia1
TACT---TTTATT------------------------ATCGTATC-------------------ACATATAT--AAATAATGTATTATATAAAGCA-CAGCAATCCAGCTTATACATTTACGTAGTGGA---------AACAAGA---------AAATAAAAAA--TATTTCTCCGGGGCGTAAAGAGTTTTAATTGAGG------------------------TCATCCC--AAGAT--------------------------------------GC--------AGCATC-----------------GAGTCCATTTAAGCCTCAT-TCATT------------------TACG----ATTCTTTTT-TTCGT------------G--TACCATCCCTCAGATCCACCGGGTTGCATTTCCACCGAACCCCTGGTCGTTGACTCCGGACCCSizeHit CountTotal NormTotal
No Reads
droTak1
TACT---TTTATT------------------------ATCGTACCT------------------ACATATAT--AAATAATGTATTATATAAAGCA-CAGCAATCCAGCTTATACATTTACGTAGTGGA---------AACAAGA---------AAATAAAAAA--TATTTCTCCGGGGCGTAAAGAGTTTTAATTGAGG------------------------TCCATCT--AT------------------------------------------------------------------------GAG-AACCATTTGATCCTCAT-TCATT------------------TACG----AGTGTTTTTTTTGTA-----------------CCATCCCTCAGATCCACCCGGTTGCATTTCCACCGAACCACTGGTCGTTGATTCCGGACCCSizeHit CountTotal NormTotal
No Reads
droEug1
TACT---TTTATT------------------------AACGTACCT------------------ACATATAT--AAATAATGTATTATATAAAGCA-CAGCAATCCAGCTTATACATTTACGTAGTGGA---------AACAAGA---------AAATAAAAAA--TATTTCTCCGGGGCGTAAAGCGTTTTAATTGAGG------------------------TCGTACT--AAG-----------------------T--------------------------AGCATA-----------------GTTCCCATTTGGACTTCAT-TCATT------------------TAAG----AATCTTTT--CTA-------------------CCATCCCTCAGATCCACCGGGTTGCATTTCCACCGAACCACTGGTCGTTGATTCCGGACCCSizeHit CountTotal NormTotal
No Reads
dm3
TACT---TTTATT------------------------A---------------------------------T--AAATAATGTATTATATAAAGCA-CAGCAATCCAGCTTATACATTTACGTAGTGGA---------AACAAGA---------AAATAAAAAA--TATTTCTCCGGGGCGTAAAGAGTTTTACTTGAGG------------------------TCACCTA--ACTAT--------------------------------------CC--------ACGCCC-----------------AATCCCATTTGAGCCTCAT-TCATT------------------TATC----AGTTTTCT--CTCAT-----------------CCATCCCTCAGATCCACCGGGTTGCATATCCACCGAGCCACTGGTCGTGGATTCCGGACCCSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.................................................................................................................ACATTTACGTAGTGGA---------AACA.......................................................................................................................................................................................................................................................................................................................2014.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000001000000000000000000000000000000
......................................................................................................ATCCAGCTTATACATTTA.............................................................................................................................................................................................................................................................................................................................................1813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................AGCTTATACATTTACGTAGTGGA---------AAC........................................................................................................................................................................................................................................................................................................................2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
....................................................................................................................TTTACGTAGTGGA---------AACAAGA---------...........................................................................................................................................................................................................................................................................................................2013.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
..............................................................................AATGTATTATATAAAGCA-CA..................................................................................................................................................................................................................................................................................................................................................................2013.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000
................................................................................................................TACATTTACGTAGTGGA---------AACA.......................................................................................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................AGCTTATACATTTACGTAGTGGA---------AACA.......................................................................................................................................................................................................................................................................................................................2713.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
.....................................................................................................................TTACGTAGTGGA---------AACAAGA---------...........................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000
.........................................................................................................CAGCTTATACATTTACGTAGT.......................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
.............................................................................................GCA-CAGCAATCCAGCTTATACA.................................................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................AGCA-CAGCAATCCAGCTTATAC..................................................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................ATTTACGTAGTGGA---------AACA.......................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................TTTACGTAGTGGA---------AACAA......................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
...............................................................................................................ATACATTTACGTAGTGGA---------AACAAGA---------...........................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000010000000
..........................................................................................................AGCTTATACATTTACGTAGTGGA---------...........................................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
..........................................................................................................AGCTTATACATTTACGTAGTGGA---------AA.........................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................ACGTAGTGGA---------AACAAGA---------A..........................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000000000000000000
....................................................................................................................TTTACGTAGTGGA---------AACAAGA---------AAAT.......................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................TCCAGCTTATACATTTACGT..........................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................GCA-CAGCAATCCAGCTTATA...................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................AGA---------AAATAAAAAA--TATTTCTCCGGGGAA................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................AATAATGTATTATATAAAGCA-CAGCAA..............................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................TAAAGCA-CAGCAATCCAGCTTATAC..................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................ACATTTACGTAGTGGA---------AAC........................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................TACGTAGTGGA---------AACAAGA---------AAAT.......................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................CATTTACGTAGTGGA---------AACAAGA---------...........................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
............................................................................................................................GTGGA---------AACAAGA---------AAATAAAAAA--TA.............................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................ATCCACCGAGCCACTGGTCGTGGATTCCGG....3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................AGCA-CAGCAATCCAGCTTATA...................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................TATACATTTACGTAGTGGA---------AACAAGA---------A..........................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
.................................................................................................................ACATTTACGTAGTGGA---------AACAAGA---------AA.........................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
.......................................................................................................TCCAGCTTATACATTTACGTAGTG......................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................ACCGAGCCACTGGTCGTGGAT.........2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
............................................................................................AGCA-CAGCAATCCAGCTTA.....................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................ATCCACCGAGCCACTGGTCGTT............2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..................................................................................................................................................................................................................................................................................................................................................................................................................GATCCACCGGGTTGCATAT................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................GCCACTGGTCGTGGATTCCGGT...2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
................................................................................................................TACATTTACGTAGTGGA---------A..........................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................GCTTATACATTTACGTAGTGGA---------AACAAGA---------...........................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................ATTATATAAAGCA-CAGCAATCCA..........................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................TGTATTATATAAAGCA-CAGCA...............................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................TCCAGCTTATACATTTACGTAGTGGA---------AACA.......................................................................................................................................................................................................................................................................................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................GTTGCATATCCACCGAGCCA.....................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
......................................................................................................ATCCAGCTTATACATTTACGTAG........................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................A---------AAATAAAAAA--TATTTCTCCGGGGAA................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................CATCCCTCAGATCCACCGGGTTGCA...................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................TATAAAGCA-CAGCAATCCA..........................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................AGCA-CAGCAATCCAGCTTATACA.................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................ACGTAGTGGA---------AACAAGA---------AAATAAAA...................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................A---------AACAAGA---------AAATAAAAAA--TAT............................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................TACGTAGTGGA---------AACAAGA---------A..........................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.ACT---TTTATT------------------------A---------------------------------T--AAATAATGT..................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................AGTGGA---------AACAAGA---------AAATAAA....................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
................................................................................TGTATTATATAAAGCA-CAGCAA..............................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................AATGTATTATATAAAGCA-CAGCAATC............................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................ATTTACGTAGTGGA---------AACAAGA---------A..........................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000
....................................................................................................................TTTACGTAGTGGA---------AACAAG.....................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................GCTTATACATTTACGTAGTGGA---------AAC........................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
........................................................................................................................CGTAGTGGA---------AACAAGA---------AAA........................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................AGCTTATACATTTACGTAGTGGA---------A..........................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................AT-TCATT------------------TATC----AGTTTTCT--CTCA...............................................................................2311.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................GCTTATACATTTACGTAGTG......................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................GCAATCCAGCTTATACATT...............................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................TCCAGCTTATACATTTACGTAGT.......................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
...................................................................................................................ATTTACGTAGTGGA---------AACAA......................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................AATAATGTATTATATAAAGCA-CAGCA...............................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................GTAGTGGA---------AACAAGA---------AAATAAAA...................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................TATTTCTCCGGGGCGTAAA............................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................AAATAATGTATTATATAAAGCA-CAGC................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................TTTTACTTGAGG------------------------TCACCTA--AC..........................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................TACGTAGTGGA---------AACAAGA---------AAATAAAA...................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................TAATGTATTATATAAAGCA-CAGC................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................ATTTACGTAGTGGA---------AACAAGA---------AAAT.......................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................TATACATTTACGTAGTGGA---------AACAAGA---------...........................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
..........................................................................................................AGCTTATACATTTACGTAGTG......................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................ACATTTACGTAGTGGA---------AACAAG.....................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................GCTTATACATTTACGTAGTGGA---------AACAA......................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................CCAGCTTATACATTTACGTAGTG......................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................TTGCATATCCACCGAGCCACTGGTCGT.............2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................GTGGA---------AACAAGA---------AAATAA.....................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................AATAAAAAA--TATTTCTCCGGGGGA................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
.............................................................................................................TTATACATTTACGTAGTGGA---------A..........................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
...............................................................................................................ATACATTTACGTAGTGGA---------AAC........................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
..................................................................................................................CATTTACGTAGTGGA---------AACA.......................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................AGTGGA---------AACAAGA---------AAATAA.....................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..CT---TTTATT------------------------A---------------------------------T--AAATAATG...................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................ATGTATTATATAAAGCA-CAGCAATCC...........................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............T------------------------A---------------------------------T--AAATAATGTATTATAT...........................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................ATTTACGTAGTGGA---------AACAAGA---------AA.........................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................GCA-CAGCAATCCAGCTTATAC..................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................AACAAGA---------AAATAAAAAA--TAT............................................................................................................................................................................................................................................................................................2020.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................AATGTATTATATAAAGCA-A...................................................................................................................................................................................................................................................................................................................................................................1920.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................AAA--TATTTCTCCGGGGAA................................................................................................................................................................................................................................................................................1860.3320000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
................................................................................................................................................................AAAA--TATTTCTCCGGGGAAC...............................................................................................................................................................................................................................................................................20200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
................................................................................................................................................................AAAA--TATTTCTCCGGGGAAA...............................................................................................................................................................................................................................................................................20200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
droSim2
TACT---TTTATT------------------------A---------------------------------T--AAATAATGTATTATATAAAGCA-CAGCAATCCAGCTTATACATTTACGTAGTGGA---------AACAAGA---------AAATAAAAAA--TATTTCTCCGGGGCGTAAAGAGTTTTACTTGAGG------------------------TCACCTA--ACTAT--------------------------------------CC--------GC-----------------------GCCCATTTGAGCCTCGT-TCATT------------------TATC----AGTTTTCT--CTCAT-----------------CCATCCCTCAGATCCACCGGGTTGCATTTCCACCGAGCCACTGGTCGTGGATTCCGGACCCSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
...............................................................................................................................................................................................................................................................................................................................................................................................................................................ACTGGTCGTGGATTCCGGAC..2011.00101000000000000000
.....................................................................................................................TTACGTAGTGGA---------AACAAGA---------...........................................................................................................................................................................................................................................................................................................1911.00100010000000000000
.....................................................................................................................................................................................................................................................................................................................................CGT-TCATT------------------TATC----AGA..........................................................................................15120.17200000000200000000
droSec2
TACT---TTTATT------------------------A---------------------------------T--AAATAATGTATTATATAAAGCA-CAGCAATCCAGCTTATACATTTACGTAGTGGA---------AACAAGA---------AAATAAAAAA--TATTTCTCCGGGGCGTAAAGAGTTTTACTTGAGG------------------------TCACCTA--ACTAT--------------------------------------CC--------AC-----------------------GCCCATTTGAGCCTCGT-TCATT------------------TATC----AGTTTTCT--CTCAT-----------------CCATCCCTCAGATCCACCGGGTTGCATTTCCACCGAGCCACTGGTCGTGGATTCCGGACACSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
...........................................................................................................GCTTATACATTTACGTAGTGGA---------AACAAGA---------...........................................................................................................................................................................................................................................................................................................2911.0010100
............................................................................ATAATGTATTATATAAAGCA-....................................................................................................................................................................................................................................................................................................................................................................2011.0010100
...................................................................................................................ATTTACGTAGTGGA---------AACAAG.....................................................................................................................................................................................................................................................................................................................2011.0011000
.............................................................................................................TTATACATTTACGTAGTGGA---------AA.........................................................................................................................................................................................................................................................................................................................2211.0011000
............................................................................................AGCA-CAGCAATCCAGCTTA.....................................................................................................................................................................................................................................................................................................................................................1911.0010001
...............................................................................................................................................................................................................................................................................................................................................................................................................................................ACTGGTCGTGGATTCCGG....1811.0010010
................................................................................................................................................................................................................................................................................................................................................................................................................................CATTTCCACCGAGCCACTGGTC...............2211.0010010
droYak3
TACT---TTTATT------------------------ATCGTACCT------------------ACATATAT--AAATAATGTATTATATAAAGCA-CAGCAATCCAGCTTATACATTTACGTAGTGGA---------AACAAGA---------AAATAAAAAA--TATTTCTCCGGGGCGTAAAGACTTTTACTTGAGG------------------------TCACCTT--AGTAT--------------------------------------CC--------ACTCCCATTC---------------ACCCACTTGAGCCTCAT-TCATT------------------TACG----ACTTTTCT--CTCAT-----------------CCATCCCTCAGATCCACCGGGTTGCATTTCCACCGAGCCACTGGTCGTGGATTCCGGACCCSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
..........................................................................................................AGCTTATACATTTACGTAGTGGA---------AACA.......................................................................................................................................................................................................................................................................................................................2711.00100000010000
...........................................................................................................GCTTATACATTTACGTAGTGGA---------AACAAGA---------...........................................................................................................................................................................................................................................................................................................2911.00100000010000
..........................................................................................................................................................AAATAAAAAA--TATTTCTCCGGGG..................................................................................................................................................................................................................................................................................2311.00101000000000
............................................................................................................................................................ATAAAAAA--TATTTCTCCGGGGAA................................................................................................................................................................................................................................................................................2311.00101000000000
droEre2
TACT---TTTATT------------------------ATCGTACCT------------------ACATATAT--AAATAATGTATTATATAAAGCA-CAGCAATCCAGCTTATACATTTACGTAGTGGA---------AACAAGA---------AAATAAAAAA--TATTTCTCCGGGGCGTAAAGAGTTTTACTTGAGG------------------------TCGCCCT--AATAT--------------------------------------CC--------ACTCCC-----------------GCCCCCATTTGAGCC-CAT-TCATT------------------TACC----AGTTTTCT--CTCAT-----------------CCATCCCTCAGATCCACCGGGTTGCATTTCCACCGAGCCACTGGTCGTGGACTCCGGACCCSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
..............................................................................................................TATACATTTACGTAGTGGA---------AACA.......................................................................................................................................................................................................................................................................................................................2312.0020000200
....................................................................................................................TTTACGTAGTGGA---------AACAAGA---------AAATAAAA...................................................................................................................................................................................................................................................................................................2811.0011000000
..........................................................................................................AGCTTATACATTTACGTAGTGGA---------A..........................................................................................................................................................................................................................................................................................................................2411.0010000100
...........................................................................................................GCTTATACATTTACGTAGTGGA---------AACA.......................................................................................................................................................................................................................................................................................................................2611.0010000100
..................................................................................TATTATATAAAGCA-CAGCAATCC...........................................................................................................................................................................................................................................................................................................................................................2311.0010000010
.......TTTATT------------------------ATCGTACCT------------------ACATAT...............................................................................................................................................................................................................................................................................................................................................................................................2111.0011000000
...................................................................................ATTATATAAAGCA-CAGCAATCCAGCT.......................................................................................................................................................................................................................................................................................................................................................2611.0011000000
...................................................................................................................ATTTACGTAGTGGA---------AACAAGA---------...........................................................................................................................................................................................................................................................................................................2111.0011000000
..........................................................................................................AGCTTATACATTTACGTAGTGGA---------AA.........................................................................................................................................................................................................................................................................................................................2511.0010000100
.......TTTATT------------------------ATCGTACCT------------------ACATA................................................................................................................................................................................................................................................................................................................................................................................................2011.0011000000
dp5
TACT---TTTATT------------------------ATCGTA--------------------------TAT--AAATAATGTATTATTTAAAGCA-CAGCAATCCAGCTTATACATTTACGTAGTGGAA--------AACAAGA---------AAATAAAAAA-ATATTTCTCCGGGGCGTACTGTCTTTCATTTGAGGATCGGATCTCTTGCGGTGTATATACCACCCA--ACCCT--------------------------------------CC--------CT-----TCCATCTACAATCTG----------TGCACCTCAT-TCAA----------------------T----TGTTTTTT--CTGTTGTTTTTTTTTTTG---CCCACTCTCCAGATCCCCCTGGCTGCATATCCACCGAACCTCTGGTCGTCGACTCCGGACCCSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
..........................................................................................................AGCTTATACATTTACGTAGTGGAA--------AAC........................................................................................................................................................................................................................................................................................................................2712.0020101000000
..........................................................................................................................TAGTGGAA--------AACAAGA---------AAATA......................................................................................................................................................................................................................................................................................................2012.0020100010000
.........................................................................................................CAGCTTATACATTTACGTAGTGGAA--------AACA.......................................................................................................................................................................................................................................................................................................................2912.0020101000000
...........................................................................................................GCTTATACATTTACGTAGTGGAA--------A..........................................................................................................................................................................................................................................................................................................................2412.0020000011000
........................................................................................................................CGTAGTGGAA--------AACAAGA---------AAA........................................................................................................................................................................................................................................................................................................2011.0010000001000
..................................................................................................................CATTTACGTAGTGGAA--------AACA.......................................................................................................................................................................................................................................................................................................................2011.0010100000000
....................................................................................................................TTTACGTAGTGGAA--------AACAAG.....................................................................................................................................................................................................................................................................................................................2011.0010000010000
............T------------------------ATCGTA--------------------------TAT--AAATAATGTAT................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
...............................................................................ATGTATTATTTAAAGCA-CAGCAATCC...........................................................................................................................................................................................................................................................................................................................................................2611.0010001000000
........................................................................................................CCAGCTTATACATTTACGTAGTGGAA--------AAC........................................................................................................................................................................................................................................................................................................................2911.0010001000000
............................................................................................................CTTATACATTTACGTAGTGGAA--------...........................................................................................................................................................................................................................................................................................................................2211.0010000010000
...........................................................................................................GCTTATACATTTACGTAGTGGAA--------...........................................................................................................................................................................................................................................................................................................................2311.0010100000000
.........................................................................................................CAGCTTATACATTTACGTAGTGGAA--------A..........................................................................................................................................................................................................................................................................................................................2611.0010000001000
..........................................................................................................AGCTTATACATTTACGTAGTGG.....................................................................................................................................................................................................................................................................................................................................2211.0010100000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................TCTGGTCGTCGACTCCGGACCC2211.0010001000000
..........................................................................................................AGCTTATACATTTACGTAGTGGAA--------AA.........................................................................................................................................................................................................................................................................................................................2611.0010000010000
.................................................................................................................ACATTTACGTAGTGGAA--------AA.........................................................................................................................................................................................................................................................................................................................1911.0010000010000
droPer2
TACT---TTTATT------------------------ATCGTA--------------------------TAT--AAATAATGTATTATTTAAAGCA-CAGCAATCCAGCTTATACATTTACGTAGTGGAA--------AACAAGA---------AAATAAAAAA-ATATTTCTCCGGGGCGTACTGTCTTTCATTTGAGGATCGGATCTCTTGCGGTGTATATACCACCCA--CCCCT--------------------------------------CC--------CT-----TCCATCTACAATCTG----------TGCACCTCAT-TCAA----------------------T----TGTTTTTT--CTGTTGTTTTTGTTTTTG---CCCACTCTCCAGATCCCCCTGGCTGCATATCCACCGAACCTCTGGTCGTCGACTCCGGACCCSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.........................................................................................................................................................................................................................................................................................................................................................................................................................................CGAACCTCTGGTCGTCGACTCCGGACCC2812.002200000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................AACCTCTGGTCGTCGACTCCG.....2111.001100000
.....................................................................................................................TTACGTAGTGGAA--------AACAAGA---------AAATAAAAA..................................................................................................................................................................................................................................................................................................2911.001000001
......................................................................................ATTTAAAGCA-CAGCAATCC...........................................................................................................................................................................................................................................................................................................................................................1911.001010000
...............................................................................................................................................................AAAAA-ATATTTCTCCGGGGA.................................................................................................................................................................................................................................................................................2011.001010000
droWil2
TACT---TTTACTACTTTATTTTATTTATCATATTTTATCGAA--------------------------------TATAATGTATTATATAAAGCA-CAGCAATCCAGCTTATACATTTACGTAGTGAA---------AACAAGAAAAAAACAAAAATAAAAAAT-GAATTCTCCGGGGCGTAATGAGTTTGATTGGATG------------------------GT----------------TAAATGC---CTTAAA-TAGAATTCCAAACT---GTTTCCTTGACT----TTTT---------------GCCTAAATA-----TGT-ACATA------------------TATG----ATTTTGTT------------------------------TATAGACCCACCAGGTTGCATATCGACTGAACCGTTGGTTGTCGATTCCGGACCCSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
................................................................................................................................................................AAAAT-GAATTCTCCGGGGA.................................................................................................................................................................................................................................................................................1914.00440000
..................................................................................................................CATTTACGTAGTGAA---------AACAAGAA...................................................................................................................................................................................................................................................................................................................2312.00220000
.............................................................................................................................................................TAAAAAAT-GAATTCTCCGGGGA.................................................................................................................................................................................................................................................................................2211.00110000
.............................................................................................................................................................TAAAAAAT-GAATTCTCCGGGG..................................................................................................................................................................................................................................................................................2111.00100100
.................................................................................................................................................................AAAT-GAATTCTCCGGGGT.................................................................................................................................................................................................................................................................................1811.00101000
.............ACTTTATTTTATTTATCATATTTTATC.............................................................................................................................................................................................................................................................................................................................................................................................................................2711.00101000
.................................................................................................................................................................AAAT-GAATTCTCCGGGGC.................................................................................................................................................................................................................................................................................1811.00110000
......................................................................................................................................................................GAATTCTCCGGGGCGTAATGAGT........................................................................................................................................................................................................................................................................2311.00100100
...............................................................................................................................................................AAAAAT-GAATTCTCCGGGG..................................................................................................................................................................................................................................................................................1911.00110000
................................................................................................................................................................AAAAT-GAATTCTCCGGGGCGT...............................................................................................................................................................................................................................................................................2111.00110000
...............................................................................................................................................................................................................................................................................................................................................................................................................................GCATATCGACTGAACCGTTGGT................2211.00100100
.........................................................................................................................................................AAAATAAAAAAT-GAATTCTCCGGGGCGT...............................................................................................................................................................................................................................................................................2811.00100100
...........................................................................................................................................................................................................................................................................................................................................................................................................................................AACCGTTGGTTGTCGATTCC......2011.00110000
......................................................................................ATATAAAGCA-CAGCAATCC...........................................................................................................................................................................................................................................................................................................................................................1911.00101000
..........................................................................................................................................................................................AGTTTGATTGGATG------------------------GT----------------TAAATGC---CT.......................................................................................................................................................................................................2511.00110000
............................................................................................................................................................ATAAAAAAT-GAATTCTCCGGGGAA................................................................................................................................................................................................................................................................................2411.00100100
...........................................................................................................GCTTATACATTTACGTAGTGAA---------AA.........................................................................................................................................................................................................................................................................................................................2411.00101000
......................................................................................................................................................................................AATGAGTTTGATTGGATG------------------------GT----------------...................................................................................................................................................................................................................2011.00100100
..........................................................................................................AGCTTATACATTTACGTAGTGAA---------A..........................................................................................................................................................................................................................................................................................................................2411.00100100
.................................................................................................................................................................AAAT-GAATTCTCCGGGGA.................................................................................................................................................................................................................................................................................1811.00101000
...............................TATTTTATCGAA--------------------------------TATAATGT..................................................................................................................................................................................................................................................................................................................................................................................2011.00100100
.................................................................................................................................................................AAAT-GAATTCTCCGGGGCG................................................................................................................................................................................................................................................................................1911.00100100
..............................................................................................................................................................AAAAAAT-GAATTCTCCGGGGA.................................................................................................................................................................................................................................................................................2111.00100100
.................................................................................................................................................................AAAT-GAATTCTCCGGGGAA................................................................................................................................................................................................................................................................................1940.50201100
................................................................................................................................................................AAAAT-GAATTCTCCGGGGAAA...............................................................................................................................................................................................................................................................................21150.13202000
...........................................................................................................................................ACAAGAAAAAAACAAAAA........................................................................................................................................................................................................................................................................................................18140.07100010
.................................................................................................................................................................AAAT-GAATTCTCCGGGGAAA...............................................................................................................................................................................................................................................................................20200.05100100
droVir3
TACTTATTTTATT------------------------ATCGTA--------------------------TAC--AAATAGCGTATTATATAAAGCA-CAACAATCCAGCTTATACATTTACGTAGTCGAAAAAAAAAAAACAAGA---------AAATAAAATATATATTTCTCCGGGGCGTAATGCGTTTGATTTC-------------------------------------------------------------------------------CC--------AT-----------------------GCCCCCTCAAT-------CCA--AACA------TCATTATTTATGCAAAACTCTTTG--C-CAC-----------CTCACACTTTCCCCTAGATCCACCTGGCTGCATATCAACCGAACCGCTCGTCGTTGACTCCGGACCCSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
...........................................................................AATAGCGTATTATATAAAGCA-....................................................................................................................................................................................................................................................................................................................................................................2115.005001000000000000002100010000000000000000000000000000000000000000
..............................................................................AGCGTATTATATAAAGCA-CA..................................................................................................................................................................................................................................................................................................................................................................2015.005002000000000000003000000000000000000000000000000000000000000000
...........................................................................AATAGCGTATTATATAAAGCA-CA..................................................................................................................................................................................................................................................................................................................................................................2313.003001000000000001000100000000000000000000000000000000000000000000
............................................................................ATAGCGTATTATATAAAGCA-CAACA...............................................................................................................................................................................................................................................................................................................................................................2512.002001000000000000000100000000000000000000000000000000000000000000
..........................................................................................................AGCTTATACATTTACGTAGTCGAAA..................................................................................................................................................................................................................................................................................................................................2512.002001000000000000000100000000000000000000000000000000000000000000
....................................................................................................................TTTACGTAGTCGAAAAAAA..............................................................................................................................................................................................................................................................................................................................1912.002000000000000000001100000000000000000000000000000000000000000000
...........................................................................AATAGCGTATTATATAAAGCA-CAACA...............................................................................................................................................................................................................................................................................................................................................................2612.002002000000000000000000000000000000000000000000000000000000000000
...........................................................................................................GCTTATACATTTACGTAGTCGAAAA.................................................................................................................................................................................................................................................................................................................................2512.002001000000000000001000000000000000000000000000000000000000000000
..........................................................................................................AGCTTATACATTTACGTAGTCGAAAAA................................................................................................................................................................................................................................................................................................................................2712.002001000000000000000100000000000000000000000000000000000000000000
........................................GTA--------------------------TAC--AAATAGCGTATTAT.............................................................................................................................................................................................................................................................................................................................................................................2012.002000000000000000001100000000000000000000000000000000000000000000
.........................................................................................................CAGCTTATACATTTACGTA.........................................................................................................................................................................................................................................................................................................................................1912.002002000000000000000000000000000000000000000000000000000000000000
.............................................................................TAGCGTATTATATAAAGCA-CAACAATCC...........................................................................................................................................................................................................................................................................................................................................................2812.002002000000000000000000000000000000000000000000000000000000000000
............................................................................ATAGCGTATTATATAAAGCA-CA..................................................................................................................................................................................................................................................................................................................................................................2212.002001000000000000001000000000000000000000000000000000000000000000
...........................................................................AATAGCGTATTATATAAAGCA-CAAC................................................................................................................................................................................................................................................................................................................................................................2511.001000000000000000001000000000000000000000000000000000000000000000
...........................................................................................................GCTTATACATTTACGTAGTCG.....................................................................................................................................................................................................................................................................................................................................2111.001000000000000000001000000000000000000000000000000000000000000000
........................................................................................ATAAAGCA-CAACAATCCAGCTT......................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000001000000000000000000000000000000000000000000000
......................................................................AC--AAATAGCGTATTATATAAAGCA-CA..................................................................................................................................................................................................................................................................................................................................................................2611.001000000000000000000100000000000000000000000000000000000000000000
...................................................................................................................ATTTACGTAGTCGAAAAAAA..............................................................................................................................................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
..............................................................................AGCGTATTATATAAAGCA-CAACA...............................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000001000000000000000000000000000000000000000000000
.....ATTTTATT------------------------ATCGTA--------------------------TAC--AAATAGCGTA.................................................................................................................................................................................................................................................................................................................................................................................2711.001000000000000000001000000000000000000000000000000000000000000000
....TATTTTATT------------------------ATCGTA--------------------------TAC--AAAT.......................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000001000000000000000000000000000000000000000000000
..........................................................................................AAAGCA-CAACAATCCAGCTTA.....................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000001000000000000000000000000000000000000000000000
.................................................................................GTATTATATAAAGCA-CAACAATCC...........................................................................................................................................................................................................................................................................................................................................................2411.001001000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................AACAAGA---------AAATAAAATATA...............................................................................................................................................................................................................................................................................................1911.001000000000000001000000000000000000000000000000000000000000000000
..........................................................................................................AGCTTATACATTTACGTAGTCGAAAA.................................................................................................................................................................................................................................................................................................................................2611.001000000000000000001000000000000000000000000000000000000000000000
.........................................................................................................CAGCTTATACATTTACGTAGTCGAAAA.................................................................................................................................................................................................................................................................................................................................2711.001000000000000000001000000000000000000000000000000000000000000000
.......................................................................C--AAATAGCGTATTATATAAAGCA-CA..................................................................................................................................................................................................................................................................................................................................................................2511.001000000000000000000010000000000000000000000000000000000000000000
.........................................................................................................CAGCTTATACATTTACGTAGTCGA....................................................................................................................................................................................................................................................................................................................................2411.001001000000000000000000000000000000000000000000000000000000000000
.........................................TA--------------------------TAC--AAATAGCGTATTAT.............................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000001000000000000000000000000000000000000000000000
...........................................................................AATAGCGTATTATATAAAGCA-CAACAAT.............................................................................................................................................................................................................................................................................................................................................................2811.001001000000000000000000000000000000000000000000000000000000000000
..................................................................................................................CATTTACGTAGTCGAAAAAAAA.............................................................................................................................................................................................................................................................................................................................2211.001000000000000000001000000000000000000000000000000000000000000000
............................................................................ATAGCGTATTATATAAAGC......................................................................................................................................................................................................................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
...................................................................................ATTATATAAAGCA-CAACAATCCAGC........................................................................................................................................................................................................................................................................................................................................................2511.001000000000000000010000000000000000000000000000000000000000000000
.............................................................................TAGCGTATTATATAAAGCA-CA..................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000001000000000000000000000000000000000000000000000
......................................................................AC--AAATAGCGTATTATATA..........................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000000010000000000000000000000000000000000000000000
...................................................................................................ACAATCCAGCTTATACATTTACGTAGTC......................................................................................................................................................................................................................................................................................................................................2811.001000000000000000000000000000000000000000000000000000000000000010
..........................................................................................................................................................AAATAAAATATATATTTCTCC......................................................................................................................................................................................................................................................................................2111.001000000000000000001000000000000000000000000000000000000000000000
........................................................................................................CCAGCTTATACATTTACGTAGTCGAAAA.................................................................................................................................................................................................................................................................................................................................2811.001001000000000000000000000000000000000000000000000000000000000000
...............................................................................................................ATACATTTACGTAGTCGAAA..................................................................................................................................................................................................................................................................................................................................2011.001000000000000000010000000000000000000000000000000000000000000000
........................................................................................................CCAGCTTATACATTTACGTAGTCG.....................................................................................................................................................................................................................................................................................................................................2411.001001000000000000000000000000000000000000000000000000000000000000
.....................................ATCGTA--------------------------TAC--AAATAGCGTATTAT.............................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000001000000000000000000000000000000000000000000000
..............................................................................................................................................................AAAATATATATTTCTCCGGGG..................................................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
................................................................................CGTATTATATAAAGCA-CAACA...............................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000001000000000000000000000000000000000000000000000
..............................................................................................................TATACATTTACGTAGTCGAAAA.................................................................................................................................................................................................................................................................................................................................2211.001000000000000000000100000000000000000000000000000000000000000000
..........................................................................................................AGCTTATACATTTACGTAGTCGAA...................................................................................................................................................................................................................................................................................................................................2411.001001000000000000000000000000000000000000000000000000000000000000
.........................................................................................................CAGCTTATACATTTACGTAGTCGAAAAA................................................................................................................................................................................................................................................................................................................................2811.001000000000000000001000000000000000000000000000000000000000000000
.........................................................................................................CAGCTTATACATTTACGTAGTCG.....................................................................................................................................................................................................................................................................................................................................2311.001000000000000000001000000000000000000000000000000000000000000000
.........................................................................................TAAAGCA-CAACAATCCAGCT.......................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000010000000000000000000000000000000000000000000
......................................................................................................ATCCAGCTTATACATTTACGTAG........................................................................................................................................................................................................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
...................................................................................................................ATTTACGTAGTCGAAAAAA...............................................................................................................................................................................................................................................................................................................................1911.001000000000000000001000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................AACCGAACCGCTCGTCGTTGACT........2311.001010000000000000000000000000000000000000000000000000000000000000
..........................................................................................................AGCTTATACATTTACGTAGT.......................................................................................................................................................................................................................................................................................................................................2011.001000001000000000000000000000000000000000000000000000000000000000
..............................................................................AGCGTATTATATAAAGCA-CAACAATCC...........................................................................................................................................................................................................................................................................................................................................................2711.001000000000000000000010000000000000000000000000000000000000000000
...............................................................................................A-CAACAATCCAGCTTATACA.................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000001000000000000000000000000000000000000000000000
.....................................................................................................................................AAAAAAACAAGA---------AAATAAAATATATAT............................................................................................................................................................................................................................................................................................2711.001001000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................CCTGGCTGCATATCAACCGAACC......................2311.001000000000000000100000000000000000000000000000000000000000000000
...............................................................................................A-CAACAATCCAGCTTATACATTTAC............................................................................................................................................................................................................................................................................................................................................2511.001000000000000000000100000000000000000000000000000000000000000000
.............................................................................TAGCGTATTATATAAAGCA-....................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000000000100000000000000000000000000000000000000000
.............................................................................................................................................................TAAAATATATATTTCTCCGGGG..................................................................................................................................................................................................................................................................................2211.001000000000000000001000000000000000000000000000000000000000000000
............................................................................ATAGCGTATTATATAAAGCA-....................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000001000000000000000000000000000000000000000000000
TACTTATTTTATT------------------------ATCGTA--------------------------TAC--A..........................................................................................................................................................................................................................................................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
.......TTTATT------------------------ATCGTA--------------------------TAC--AAATAGC....................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000000100000000000000000000000000000000000000000000
...................................................................................ATTATATAAAGCA-CAACAATCC...........................................................................................................................................................................................................................................................................................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
......................................TCGTA--------------------------TAC--AAATAGCGTATTATAT...........................................................................................................................................................................................................................................................................................................................................................................2411.001000000000000000001000000000000000000000000000000000000000000000
..................................................................................................................CATTTACGTAGTCGAAAAAAAAAAAAA........................................................................................................................................................................................................................................................................................................................2711.001000000000000000000100000000000000000000000000000000000000000000
..........................................................................AAATAGCGTATTATATAAAGCA-CAACA...............................................................................................................................................................................................................................................................................................................................................................2711.001001000000000000000000000000000000000000000000000000000000000000
.......................................................................................................TCCAGCTTATACATTTACGTAGTCGA....................................................................................................................................................................................................................................................................................................................................2611.001000000000000000001000000000000000000000000000000000000000000000
........................................................................................................................................................................................TGCGTTTGATTTC-------------------------------------------------------------------------------CC--------AT-----------------------GC............................................................................................................................................1911.001000000010000000000000000000000000000000000000000000000000000000
...................................................................................................ACAATCCAGCTTATACATTTAC............................................................................................................................................................................................................................................................................................................................................2211.001000000000000000001000000000000000000000000000000000000000000000
................................................................................................................................................................AATATATATTTCTCCGGGGAA................................................................................................................................................................................................................................................................................2120.501000000000000000010000000000000000000000000000000000000000000000
droMoj3
TACTTATTTTATT------------------------ATGGTA--------------------------TAC--AAATAGCGTATTATATAAAGCA-CAACAATCCAGCTTATACATTTACGTAGTCGAAAAAA-AAAAACAAGA---------AAATAAAATATATATTTCTCCGGGGCGTATTGTGTTTAATTTA------------------------------CC-ATGG-C------CAAT-GATCTATT-----------------------------------------------------------TAATTGATGC-AAT-ATATT------------------TG----------------C-ATC-----------TTCACAA-TTCACACAGATCCACCTGGCTGTATATCCACGGAGCCGCTGGTCGTTGACTCTGGACCCSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
........................................................................................................CCAGCTTATACATTTACGTAGTCGAAAA.................................................................................................................................................................................................................................................................................................................................2811.001100000
...........................................................................................................GCTTATACATTTACGTAGT.......................................................................................................................................................................................................................................................................................................................................1911.001100000
..........................................................................................................AGCTTATACATTTACGTAGTCGAAAA.................................................................................................................................................................................................................................................................................................................................2611.001001000
......................................TGGTA--------------------------TAC--AAATAGCGTATTATATAA.........................................................................................................................................................................................................................................................................................................................................................................2611.001000001
droGri2
TACTTATTTTATT------------------------ATGGTA--------------------------TAC--AAATAGCGTATTATATAAAGCA-CAGCAATCCAGCTTATACATTTACGTAGTCGA---------AAAAA----AAAACGAAAATAAAATATATATTTCTCCGGGGCGTATTGTGTTTGATTTG------------------------------CCCAC-A-------------------------------------ATTATCC--------GA---------------------G-TTCCATTTG-----------ATT------------------TATG----CCGC--CT--CCCAC-----------T-----TCACACTCTAGATCCACCTGCTGGCATATCCACCGAACCGCTGGTGGTCGACTCCGGACCCSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
......................................................................................ATATAAAGCA-CAGCAATCCAGCTTATA...................................................................................................................................................................................................................................................................................................................................................2711.00110
..............................................................................................................................................................AAAATATATATTTCTCCGGGG..................................................................................................................................................................................................................................................................................2111.00110

Generated: 05/18/2015 at 03:21 AM