ID:

dan_1932

 Coordinate:

scaffold_13266:10430673-10430855 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-20.0 -19.62 -19.52

Flybase annnotation

CDS [Dana\GF13217-cds]; exon [dana_GLEANR_13231:3]; exon [dana_GLEANR_13231:4]; CDS [Dana\GF13217-cds]; intron [Dana\GF13217-in]

No Repeatable elements found

mature
  1. scaffold_2224:360-379 -
  2. scaffold_12903:11344-11363 +
  3. scaffold_12916:6926968-6926987 -
  4. scaffold_13266:8181909-8181928 -
  5. dan_1932  scaffold_13266:10430796-10430815 +
  6. scaffold_13337:12079932-12079951 +
  7. scaffold_13505:4-23 -
star

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
GCAGTCAGATGGCGATGAAGATGATGAGGTTAATGGCAACGATTCCGAACGTAAGTATTAAAAGGCAGCATAAGAACATATAATCTCAGTTTTCCACCATTAACTCTCATGTCCGTCTGGTTAAAGGCTTTATCGCATATTTGAGGGGTTTCACGATTTCTGTTATCACCAACAACCAACCAAAAAAAAAAAAAAAACAAACATTCTCAACCATAGCTTCTGTCGCCTTTCAGATAAGCGCGGTGCCTTCTGTATTAATGGTTTAGAAATCGATTTAGACGAG
**************************************************..........((((((.(((.(((.............((((((..((((...((......)).....))))..))))))...........(((((((((((...............................................)))).)))))))......))).))).))))))...************************************************** 		Read size # Mismatch Hit Count Total Norm Total M058
embryo
 V039
embryo
 M044
female body
 V055
head
 V105
male body
.............................................................................................................................................................................................AAAAAAAACAAACCTTCTCACCA....................................................................... 23 3 1 1.00 1 1 0 0 0 0
......................GATGAGGTTAATGGCAACGATTCC............................................................................................................................................................................................................................................. 24 0 1 1.00 1 1 0 0 0 0
...............................................................................................................................................................................................AAAAAACAAACAATCTCAAC........................................................................ 20 1 1 1.00 1 1 0 0 0 0
.......GATGGCGATGAAGATGATGAGA.............................................................................................................................................................................................................................................................. 22 1 1 1.00 1 0 1 0 0 0
............................................................................................................................................................................CAACCAACCAAGAAAGAAAAAAA........................................................................................ 23 2 5 0.40 2 2 0 0 0 0
..............................TAATGGCAACGCTTCTGA........................................................................................................................................................................................................................................... 18 2 6 0.33 2 0 0 2 0 0
.........................................................................................................................................................................CAACAACCAACCCAAAAAAAAAAAAC........................................................................................ 26 2 4 0.25 1 1 0 0 0 0
...........................................................................................................................................................................ACAACCACCCAAAAAAAAAAAA.......................................................................................... 22 1 4 0.25 1 1 0 0 0 0
.........................................................................................................................................................................AAACAACCAACCAAAAAAAAA............................................................................................. 21 1 5 0.20 1 1 0 0 0 0
.........................................................................................................................................................................CAACAACCCACCAAAAAAAA.............................................................................................. 20 1 5 0.20 1 1 0 0 0 0
......................................................................................................................................................................................AAAAAAGAAAAAAAACACACATTC............................................................................. 24 2 5 0.20 1 0 0 0 1 0
.............................................................................................................................................................................AACCAACCAAAACACTAAAAAAAAC..................................................................................... 25 3 7 0.14 1 1 0 0 0 0
...........................................................................................................................................................................ACGATCAACCAAAAAAAAAAAAAAAA...................................................................................... 26 2 7 0.14 1 1 0 0 0 0
.............................................................................................................................................................................AACCAACCAAAAAAAAAAAA.......................................................................................... 20 0 7 0.14 1 1 0 0 0 0
..........................................................................................................................................................................AACAACCACCCAAAAAAAAA............................................................................................. 20 1 7 0.14 1 1 0 0 0 0
....................................................................................................................................................................AACACCAACAACCCACCAAAGA................................................................................................. 22 3 7 0.14 1 1 0 0 0 0
............................................................................................................................................................................CAACCCACCAAAAAAAAAAAAACA....................................................................................... 24 2 8 0.13 1 1 0 0 0 0
..........................................................................................................................................................................AACAACCGACCAAAAAAA............................................................................................... 18 1 9 0.11 1 1 0 0 0 0
.........................................................................................................................................................................CAACAACCCACCAAAAATAAA............................................................................................. 21 2 9 0.11 1 1 0 0 0 0
................GAAGATGATGCGATTAATTGC...................................................................................................................................................................................................................................................... 21 3 10 0.10 1 1 0 0 0 0
..............................TAATGGCAACGCTTCTGAC.......................................................................................................................................................................................................................................... 19 3 20 0.10 2 0 0 2 0 0
................................................................................................................................TTTATCGCATATTTTAAGG........................................................................................................................................ 19 2 11 0.09 1 0 1 0 0 0
.............................................................................................................................................................................AACCAACCAAAACAAAAAAA.......................................................................................... 20 1 13 0.08 1 1 0 0 0 0
..........................................................................................................................................................................AACAACCACCCAAGAAAAAA............................................................................................. 20 2 16 0.06 1 1 0 0 0 0
.................................................................................................................................................................................AACCAAAAAGAAAAAAAAAAC..................................................................................... 21 1 16 0.06 1 1 0 0 0 0
............................................................................................................................................................................CAACGAACCAAAAAAAAAAAA.......................................................................................... 21 1 19 0.05 1 1 0 0 0 0
...........................................................................................................................................................................AAAACCAACCAGAAAAAAAAAAAAA....................................................................................... 25 2 19 0.05 1 1 0 0 0 0
.............................................................................................................................................................................AACCCACCAAAATAAAAAAA.......................................................................................... 20 2 20 0.05 1 1 0 0 0 0
..................................................................................................................................................................................ACCAAAAAAAACAAAAAAAC..................................................................................... 20 1 20 0.05 1 1 0 0 0 0
..........................................................................................................................................................................AACAACCAACCAAGAAAACA............................................................................................. 20 2 20 0.05 1 1 0 0 0 0
............................................................................................................................................................................CAACCAAGCAAAAAAAAGAGAA......................................................................................... 22 3 20 0.05 1 1 0 0 0 0
..............................................................................................................................................................................CCCAACCAAAAAAAAAAAAAAA....................................................................................... 22 1 20 0.05 1 1 0 0 0 0
.....................................................................................................................................................................................AAAAAAAAAAAAAGAACAAACA................................................................................ 22 1 20 0.05 1 1 0 0 0 0
.................................................................................................................................................................................AACCAAAAAAAAAAAAAAA....................................................................................... 19 0 20 0.05 1 1 0 0 0 0
..............................................................................................................................................................................CCCAACCAAAAAAAAAAAAAA........................................................................................ 21 1 20 0.05 1 1 0 0 0 0
..............................................................................................................................................................................ACCATCCAAAAAAAAAAAAA......................................................................................... 20 1 20 0.05 1 1 0 0 0 0
.................................................................................................................................................................................AACCATAAAAAAAAGAAAAACA.................................................................................... 22 2 20 0.05 1 1 0 0 0 0
...........................................................................................................................................................................AAAACCAACCAAAAAAAAAAAA.......................................................................................... 22 1 20 0.05 1 0 1 0 0 0
...............TGAAGATCATGAGCTTAATC........................................................................................................................................................................................................................................................ 20 3 20 0.05 1 0 0 0 0 1

Anti-sense strand reads

CGTCAGTCTACCGCTACTTCTACTACTCCAATTACCGTTGCTAAGGCTTGCATTCATAATTTTCCGTCGTATTCTTGTATATTAGAGTCAAAAGGTGGTAATTGAGAGTACAGGCAGACCAATTTCCGAAATAGCGTATAAACTCCCCAAAGTGCTAAAGACAATAGTGGTTGTTGGTTGGTTTTTTTTTTTTTTTTGTTTGTAAGAGTTGGTATCGAAGACAGCGGAAAGTCTATTCGCGCCACGGAAGACATAATTACCAAATCTTTAGCTAAATCTGCTC
**************************************************..........((((((.(((.(((.............((((((..((((...((......)).....))))..))))))...........(((((((((((...............................................)))).)))))))......))).))).))))))...************************************************** 		Read size # Mismatch Hit Count Total Norm Total V055
head
 V106
head
 M058
embryo
...........................................................................................................................................................................................................................................TTCGCGACACGGATGAC............................... 17 2 8 0.13 1 1 0 0
............................................................................................................................................................................................................................................TCCCGCCACGGCAGACCTAA........................... 20 3 9 0.11 1 0 1 0
....................................................................................................................................GGCGTCCAAACTCCCCAAAGT.................................................................................................................................. 21 3 10 0.10 1 1 0 0
....................................................................................................................................GGCGTCAAAACTCCCCAAAGT.................................................................................................................................. 21 3 12 0.08 1 1 0 0
..............................................................................................................................................CTCCACAAAGTGCTTAAGACT........................................................................................................................ 21 3 12 0.08 1 1 0 0
.....................................................................................................................................................................................................................................GGTGTATTCGCGCGACGGA................................... 19 3 14 0.07 1 1 0 0
.................................................................................................................................................................................................................................................CCACGGAACAAATAATTA........................ 18 2 20 0.05 1 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droAna3 scaffold_13266:10430623-10430905 + dan_1932 GCAGTCAGATGGCGATGAAGATGATGAGGTTAATGGCAACGATTCCGA------AC---GTAAGTATTAA--A-----------------------------AGGCAGCATAAGAAC-----------------------------------------------ATA----------------------------------------------------------------------------------TAATCTCAG------------------TT-TTCCACCATT----------------A-----------------------------------------------------------A---------------------------CTCTCATGTCCGTCTGGTTAAAGG-CTTTATCGCATATTTGAGGGGTTTCAC-----------------------GA-TTTCT------------------------------------------------GTTA-TCACCAACAACCAACCAAAAAAAAAAAAAAAACAAACATTCTCAAC-CATAGCTTCTGTCGCCTTT-CAGATAAGCG---------CGGTGCCTTCTGTATTAATGGTTTAGAAATCGATTTAGACGAG
droBip1 scf7180000396428:849877-850171 + GCAATCAGATGGCGATGATGATGATGAGGTTAATGGCAACGATTCCGAAGAGGAAG---GTATGTATTC-------------------------------AAA-----------------GTCTCTA----------ACAAA----------TA----------ACTAAAC-TACAGCATTAAACAGGA-T-----TA-----------------------------------------------CATATAATCTCAG------------------TT-TTTCACCATT----------------A-----------------------------------------------------------A---------------------------CTTCCATGTCCGTCTGGTTAAAGG-CTTTATCACATATTTG--AGGTTTCAC-----------------------GT-TCTCT------------------------------------------------GTTA-TC-ACAAACAA-----------------AA--AACCAACATTCAAC-CATAGCTTCTGTCGCCTTT-CAGATAAGCG---------CGGTGCCTTCTGTTTAAATGGTTTAGAAATCGATTTAGACGAG
droKik1 scf7180000302385:533940-534228 - GCAATCCGACGGCGATGATGATGATGAGGTCAATGGCAACGATTCCGAGGAGGAAG---GTGTGTATTTC--GAAG------------------------------------------------------GGGTTTTAC----------TAGTTACAA-------CGCATCTTGGCATATC---------------------------------------------------------AGGGAAGGA------------------------------TCTACCACCATT----------------T---------------------------------------------------------TAAT--------------------------GCTCATTGTCCGTCTGCTTAGCTC-TTAAATAGCTTTTC-A--TGGG-TCGC----------------------AGCTTTTGT------------------------------------------------TTAA-TC-TCAAAAAG-----------------CA--AGCTTAAATCCAAC-AATGGCTTCTGTCGCCTTT-CAGATAAGCG---------CAGTGCCTTCTGTTTGAACGGTTTAGAAATCGATTTAGACGAG
droFic1 scf7180000453948:1691171-1691460 + GCAATCTGATGGCGATGATGATGATGAGGTCAACGGCAACGACTCCGAGGAGGAAG---GTGTGTATTTC--AATGGGTATCATCGC-----------------------------------------------------------------TT--------ACA-CAATC-TGCAGAATCGA---A---------------------------------------------------------TGATCTTATATTGG------------------TTGTACCACCATT----------------T---------------------------------------------------------AAA---------------------------GCTCACTGTCCGTCTGCTTAAACACTTAAGTCGTTTTCC-G--TGGC-TCAC-----------------------GC-TTACT-----------------------------------------------AAATA-TC-ACAAAAAA---------------------GGAAC-TTTTCAAC-CCAAGCTTCTGTCGCCTTT-CAGATAAGCG---------CAGTGCCTTCTGTTTGAATGGGTTAGAAATCGATTTAGACGAG
droEle1 scf7180000491214:479029-479324 + GCAATCCGATGGTGATGATGATGAAGAAGTCAACGGCAACGATTCCGAGGAGGAAG---GTGTGTATTCC--AACGACAAATATATC-----------------------------------------------------------------TC--------ACATCAAAC-TGCAGAATTTA---AATTGGGAATA--------------------------------------------------------------------------------TTAACCACCATC----------------T---------------------------------------------------------AAA---------------------------GCTCATTGTCCGTCTGTTTAC-----T-TAACGCCTTTC-G--CGGT-TTGG-----------------------TC-TTCTT--------------------------------TTTTTTTTTTTTGATT-GTAAAC-ACAAAAAC---------------------CGCATTTGTTCAAC-CCTAGATTCTGTCGCCTTT-CAGATAAGCG---------CAGTGCCTTCTGTTTGAATGGTTTAGAAATCGATTTAGACGAG
droRho1 scf7180000777956:19329-19613 + GCAATCCGAGGGCGACGATGATGATGAGGTCAACGGCAACGATTCCGAGGAGGAAG---GTATGTATTCC--AACGACATTTATAAC-----------------------------------------------------------------TT--------ACACAAAAC-TGCCAAATTCA---GAA-GGGAAAA--------------------------------------------------------------------------------TGTACCATTATT----------------T---------------------------------------------------------AAA---------------------------GCTCATTGTCCGTCTGTTTATTTA-TTCTATCGTCTTTC-G--TGGC-TGGC-----------------------GC-TTTCT-----------------------------------------------T-GTAATC-ACAAAAAC---------------------CGCTCATGTTCAAC-CCTAGATTCTGTCGCCTTT-CAGATAAGCG---------CAGTGCCTTCTGTTTAAATGGTCTAGAAATCGATTTAGACGAG
droBia1 scf7180000301754:2810380-2810674 + GCAATCCGATGGCGATGATGACGATGAGGTCAACGGCAACGATTCCGACGAAGAAGGAGGTATGTATAGC--AAGGTCTTT-------------------GAC-----------------ATA-----------------------------TTACAAGCAA-----AAAT-CACAGAATTCA---GGA-GGGTACAT---------------------------------------------------TACTTTTAG------------------CTGTACCATCAAT----------------C---------------------------------------------------------GAA---------------------------GCTCATTGTCCGTCTGCTTAGTTT-CTCAAACGCCTTTT-G--GGGC-TCGC--------------------------------------------------------------------------------TTA-TC-ACAAAAAT-----------------GT--ATCACATTTTCAAC-ACTAGCTTCTGTCGCCTTT-CAGATAAGCG---------CAATGCCTTCTGTTTGAACGGTTTAGAAATCGATTTAGACGAG
droTak1 scf7180000415795:85670-85965 - GCAATCCGATGGCGATGATGACGATGAGGTCAACGGCAACGACTCCGACGAAGAGGGAGGTATGTATCGC--CAGAACTTT----------------------------------------------C---------ATATA---------CTC-------ACAAAAAAAT-CTCAGAATTTA---GAA-GGGAACATTTTT---------------AAAAA-------------------C-------TACTCTTGG------------------CTTTACCATCACT----------------C---------------------------------------------------------TAA---------------------------GCTCATTGTCCGTCTGTTTAAA---------------------TGCT-TTGC-----------------------GC-TCACT-----------------------------------------------TGTAA-TCACCAAAAAT---------------------AGCCCATTTTCAAC-ACTAGCTTCTGTCGCCTTTGCAGATAAGCG---------CAATGCCTTCTGTTTGAATGGTTTAGAAATCGATTTAGACGAG
droEug1 scf7180000409672:1346648-1346950 + GCAATCTGACGACGATGATGATGACGAGGTCAACGGCAACGATTCCGACGAAGAAGGAGGTATGTATTTT--AATAACTTTCATA-------AAACTCCG-----CAAT-------------------------------------------------------------T-GACAGAATTC-----------------------------------------------TTACATAACTAA----------------GA------------------TTTATCAGCATT----------------CACCAAAGA-TTT--------------------------------------------AAAA---------------------------ACTCATTGTCTGTCTGGTTATTTA-TTTCATTACTTTTT-G--GGGT-TTGT-----------------------GG-TTTCT-----------------------------------------------TGCGA-TCACCAAAAAC----------------------ATAAATTTTGAAA-ACTAGCTTCTGTCGCCTTT-CAGATAAGCG---------AAATGCATTCTGTTTGAATGGTTTAGAAATTGATTTAGACGAA
dm3 chr2R:13755544-13755850 - GCAATCTGATGGCGATGATGATGATGAGGTCAACGGCAACGATTCCGACGAAGTGGGAGGTGTGTATTC-------------------------------GAC-----------------GTATTTAT---------AGAGA----------------CCAAAGATTAAAT-CGCAGAATTCA---GGA-G-----TTTTTTTTT--------TATAAAAGA-------------------TTTCCAT-----------------------------GTAACCACCATT----------------A---------------------------------------------------------AAA---------------------------TTCCATTGTCCGTCTGTTTAA----CTTAATCGCTTATT-G--TGAA-TCGC-----------------------GC-TTTCT-----------------------------------------------TCGTATT-AACAATAAT---------------------ATCATATACTCAAC-CGTGGCTTTTGTCGCCTTT-CAGATAAGTG---------CAATGCATTCTGTTTAAATGGTTTAGAGATCGATTTAGACGAG
droSim2 2r:14445498-14445797 - dsi_15750 GCAATCTGATGGCGATGATGATGATGAGGTCAACGGCAACGATTCCGACGAAGAAGGAGGTGGGTATTA-------------------------------GAT-----------------GTATTGTA---------ATAGA----------------GCAAAGATTCAAT-CGCAGAATTCA---GGA-T-----TTTTTT---------------AAAGA-------------------GAACCAT-----------------------------TTAACCACCATT----------------A---------------------------------------------------------GAA---------------------------TTCCATTGTCCGTCTGTTTAA----CCTAATCGCTTATT-G--TGGA-TCGC-----------------------GC-TTTCT-----------------------------------------------TCGTATT-ATCAATAAT---------------------ATCATATACTCAAC-CGTGGCTTTTGTCGCCTTT-CAGATAAGTG---------CAATGCATTCTGTTTAAATGGTTTAGAGATCGATTTAGACGAG
droSec2 scaffold_1:11251336-11251639 - GCAATCTGATGGCGATGATGATGATGAGGTCAACGGCAACGATTCCGACGAAGAAGGAGGTTGGTATTA-------------------------------GAT-----------------GTATTGTA---------ATAGA----------------GCAAAGATGCAAT-CGCAGAATTCA---GGA-T-----TTTTTTTTTT-----------TAAGA-------------------GAACCAT-----------------------------TTAACCACCATT----------------A---------------------------------------------------------GAA---------------------------TTCCATTGTCCGTCTGTTTAA----CCTAATCGCTTATT-G--TGGA-TCGC-----------------------AC-TTTCT-----------------------------------------------TCGTATT-AACAATTAT---------------------TTCATATACTCAAC-CGTGGCTTTTGTCGCCTTT-CAGATAAGTG---------CAATGCATTCTGTTTAAATGGTTTAGAGATCGATTTAGACGAG
droYak3 2R:15426930-15427236 + GCAATCTGAGGGCGATGATGATGATGAGGTCAACGGCAACGATTCCGACGAAGAAGGAGGTTAGTATTC-------------------------------GGT-----------------GTATTGAT---------AGAGC----------------GCAAACATCAAAT---CAGAATTCA---GGA-G-----TTTTTTTTTA------TTAAAAAAGA-------------------TTGCCAT-----------------------------TTAACCGCCATT----------------A---------------------------------------------------------GAA---------------------------TTCCATTGTCCGTCTGTTTAA----CTTAATCGCTTTTT-G--TGGA-TCGC-----------------------GC-TTTCT-----------------------------------------------TCGTATT-AACTATAAT---------------------ATCATATACTGAAC-TCTGGCTTTTGTCGCCTTT-CAGATAAATG---------CAATGCGTTCTGTTTAAATGGTTTAGAAATCGATTTAGACGAA
droEre2 scaffold_4845:7983118-7983430 - GCAATCTGATGGCGATGATGATGATGAGGTCAACGGCAACGATTCCGACGAAGAAGGAGGTTGGTATTC-------------------------------GAT-----------------GTATTGAT---------AGACA----------------GCAAGCATTAAAT---CAGAATTCA---GGA-G-----TTTTTTTTTTTTTTTTTTTGAAAAGA-------------------TTGCCAT-----------------------------TTACCCACCATT----------------A---------------------------------------------------------GAA---------------------------TTCCATTGTCCGTCTGTTTAA----CTTTATCGCTTATT-G--TGGT-TCGC-----------------------GC-TTTCT-----------------------------------------------TCGTATT-AACAATAAT---------------------ATCATATATTCAAC-CTTGGCTTTTGTCGCCTTT-CAGATAAGTG---------CAATGCATTCTGTTTGAATGGTTTAGAAATCGATTTAGACGAG
dp5 3:16570467-16570775 - GCAGTCGGAGGGAGACGACGATGAAGAGGTCAACGGGAACGATTCTGAGGAAGAAG---GTGTGTATATAGCTAT-----GTAG---ATAAAGAAGTGGG-----GAGATTACAGACCTAT------------------------------------------------------------------------------------------------------------------CATCAA----------------GATTTGTCATATATATTTGT-----------TTGCATTGTCCGACTTCAGTT-----------------------------------------------------------------------AGT--------------------------------------TATCGCT-----------------AAATTATTATGATACAAAATGGTGC-TT--AGTCTCG-----------AAATCGGTTCTTCCATC-------------T-GTATTC-ACAAA-------------------------ACGCAT-CTCAAC-CTCAGCTTCTGTCGCCTTT-CAGATAAGCG---------CAATGCATTCTGTTTGAATGGGTTAGAAATCGATTTAGACGAG
droPer2 scaffold_4:191166-191474 + GCAGTCGGAGGGAGACGACGATGAAGAGGTCAACGGGAACGATTCTGAGGAAGAAG---GTATGTATATAGCTAT-----GTAG---ATAAAGAAGTGGG-----GAGATTACAGACCTAT------------------------------------------------------------------------------------------------------------------CATCAA----------------GATTTGTCATATATATTTGT-----------TTGCATTGTCCGACTTCAGTT-----------------------------------------------------------------------AGT--------------------------------------TATCGCT-----------------AAATTATTATGATACAAAATGGTGC-TT--AGTCTCG-----------AAATCGGTTCTTCCATC-------------T-GTATTC-ACAAA-------------------------ACGCAT-CTCAAC-CTCAGCTTCTGTCGCCTTT-CAGATAAGCG---------CAATGCATTCTGTTTGAATGGGTTAGAAATCGATTTAGACGAG
droWil2 scf2_1100000004558:2209733-2209806 - -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTGTCGCCTTT-CAGATAAGCGAAGCAGCAGCAATGCCTTCTGTTTAAATGGTTTAGAATTCGATTTAGACGAA
droVir3 scaffold_12875:15429259-15429558 + dvi_7088 GCAATCGGAGGGCGATGACGATGAGGAGGTCAATGGCAATGACTCCGAGGTTGACG---GTACGTTTAC-------------------------------GCA-----------------TCATTCAT---------AGATG----------------ACATTTATCATAG---GGGAAACAA----------------------------------------------------------------------------CTTGTTACGC--TATTGC-----------TCTTGCTGATCGGTGTCAGCT-TCTGGTTT--------------------------------------------CAAA--------------AGTTGTTGCCACATTCCA-TGCCCGCCC-------------------------------------------------------------------TGTTTAGGATCTGATCTG---TTCAGTTATC-------------------GTA-----TCA-------------------------TACACAT-CTCAACACACAGATTCTGTCGCCTTT-CAGATGAGCG---------CAGTGCCTTCTGTGTAAATGGTTTAGAAATCGATTTAGACGAG
droMoj3 scaffold_6496:8367768-8368091 - ACAATCGGAAGGTGATGATGATGATGAAGTCAATGGCAATGACTCCGAGGATGAAG---GTGTGTACCAC--AAAAGACAGCATTTC------------------------------------TCCA-AGGA---------ACTGCTAATAATTGCCA-------TAAATT-TGCTGTATTATACAG-----------------------------------------------------------AT-----------------------------CTAGCGATCGTT----------------C-TC---------ACTCATTGTTAGTTTCGTACTTCGGATCATAGTCACTCTCATTTC-------------------TTATTG-----------------------------------------------------TCAC-----------------------AT-TCCCTATTTGCGCTAAGATCAG---TTCAGTC--C-------------------ATA-----TCG-------------------------TATACAT-TACAATACACAGATTCTGTCGACTTT-CAGATGAGCC---------CAGTGCCTTCTGTGTAAATGGTTTAGAAATCGATTTAGACGAG
droGri2 scaffold_15245:12230392-12230689 + GCAGTCGGATGGCGATGACGATGAGGAGGTCAATGGCAATGACTCCGAGGATGAAG---GTTTGTATATATGCAT-----GTGT---ACA----------------------------------------------------------------------AAACATCCATT---CATAGTATA---AGATTTGTACA----------------------TGAGCAACTGTTGCATATCTGA----------------GC------------------CAGATCAATGTC----------------GTCTGTCTGTTTT--------------------------------------------G-AAAACCATCATCAGTTAG---------------------------------------------------G--CAGC-TAGG-----------------------AT-TTGAT---TCG-----------AAATTCGATTATC----------------------------CA-------------------------AACACAT-CTCAACACACAGATTCTGTCGCCTTT-CAGATGAGCG---------CAGTGCCTTCTGTGTAAATGGCTTAGAGATCGATTTAGACGAG

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droAna3
GCAGTCAGATGGCGATGAAGATGATGAGGTTAATGGCAACGATTCCGA------AC---GTAAGTATTAA--A-----------------------------AGGCAGCATAAGAAC-----------------------------------------------ATA----------------------------------------------------------------------------------TAATCTCAG------------------TT-TTCCACCATT----------------A-----------------------------------------------------------A---------------------------CTCTCATGTCCGTCTGGTTAAAGG-CTTTATCGCATATTTGAGGGGTTTCAC-----------------------GA-TTTCT------------------------------------------------GTTA-TCACCAACAACCAACCAAAAAAAAAAAAAAAACAAACATTCTCAAC-CATAGCTTCTGTCGCCTTT-CAGATAAGCG---------CGGTGCCTTCTGTATTAATGGTTTAGAAATCGATTTAGACGAGSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
......................GATGAGGTTAATGGCAACGATTCC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001010000
.......GATGGCGATGAAGATGATGAGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001001000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACCAACCAAAAAAAAAAAA.....................................................................................................2070.141010000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACCAAAAAAAAAAAAAAA..................................................................................................19200.051010000
droBip1
GCAATCAGATGGCGATGATGATGATGAGGTTAATGGCAACGATTCCGAAGAGGAAG---GTATGTATTC-------------------------------AAA-----------------GTCTCTA----------ACAAA----------TA----------ACTAAAC-TACAGCATTAAACAGGA-T-----TA-----------------------------------------------CATATAATCTCAG------------------TT-TTTCACCATT----------------A-----------------------------------------------------------A---------------------------CTTCCATGTCCGTCTGGTTAAAGG-CTTTATCACATATTTG--AGGTTTCAC-----------------------GT-TCTCT------------------------------------------------GTTA-TC-ACAAACAA-----------------AA--AACCAACATTCAAC-CATAGCTTCTGTCGCCTTT-CAGATAAGCG---------CGGTGCCTTCTGTTTAAATGGTTTAGAAATCGATTTAGACGAGSizeHit CountTotal NormTotal
No Reads
droKik1
GCAATCCGACGGCGATGATGATGATGAGGTCAATGGCAACGATTCCGAGGAGGAAG---GTGTGTATTTC--GAAG------------------------------------------------------GGGTTTTAC----------TAGTTACAA-------CGCATCTTGGCATATC---------------------------------------------------------AGGGAAGGA------------------------------TCTACCACCATT----------------T---------------------------------------------------------TAAT--------------------------GCTCATTGTCCGTCTGCTTAGCTC-TTAAATAGCTTTTC-A--TGGG-TCGC----------------------AGCTTTTGT------------------------------------------------TTAA-TC-TCAAAAAG-----------------CA--AGCTTAAATCCAAC-AATGGCTTCTGTCGCCTTT-CAGATAAGCG---------CAGTGCCTTCTGTTTGAACGGTTTAGAAATCGATTTAGACGAGSizeHit CountTotal NormTotal
No Reads
droFic1
GCAATCTGATGGCGATGATGATGATGAGGTCAACGGCAACGACTCCGAGGAGGAAG---GTGTGTATTTC--AATGGGTATCATCGC-----------------------------------------------------------------TT--------ACA-CAATC-TGCAGAATCGA---A---------------------------------------------------------TGATCTTATATTGG------------------TTGTACCACCATT----------------T---------------------------------------------------------AAA---------------------------GCTCACTGTCCGTCTGCTTAAACACTTAAGTCGTTTTCC-G--TGGC-TCAC-----------------------GC-TTACT-----------------------------------------------AAATA-TC-ACAAAAAA---------------------GGAAC-TTTTCAAC-CCAAGCTTCTGTCGCCTTT-CAGATAAGCG---------CAGTGCCTTCTGTTTGAATGGGTTAGAAATCGATTTAGACGAGSizeHit CountTotal NormTotal
No Reads
droEle1
GCAATCCGATGGTGATGATGATGAAGAAGTCAACGGCAACGATTCCGAGGAGGAAG---GTGTGTATTCC--AACGACAAATATATC-----------------------------------------------------------------TC--------ACATCAAAC-TGCAGAATTTA---AATTGGGAATA--------------------------------------------------------------------------------TTAACCACCATC----------------T---------------------------------------------------------AAA---------------------------GCTCATTGTCCGTCTGTTTAC-----T-TAACGCCTTTC-G--CGGT-TTGG-----------------------TC-TTCTT--------------------------------TTTTTTTTTTTTGATT-GTAAAC-ACAAAAAC---------------------CGCATTTGTTCAAC-CCTAGATTCTGTCGCCTTT-CAGATAAGCG---------CAGTGCCTTCTGTTTGAATGGTTTAGAAATCGATTTAGACGAGSizeHit CountTotal NormTotal
No Reads
droRho1
GCAATCCGAGGGCGACGATGATGATGAGGTCAACGGCAACGATTCCGAGGAGGAAG---GTATGTATTCC--AACGACATTTATAAC-----------------------------------------------------------------TT--------ACACAAAAC-TGCCAAATTCA---GAA-GGGAAAA--------------------------------------------------------------------------------TGTACCATTATT----------------T---------------------------------------------------------AAA---------------------------GCTCATTGTCCGTCTGTTTATTTA-TTCTATCGTCTTTC-G--TGGC-TGGC-----------------------GC-TTTCT-----------------------------------------------T-GTAATC-ACAAAAAC---------------------CGCTCATGTTCAAC-CCTAGATTCTGTCGCCTTT-CAGATAAGCG---------CAGTGCCTTCTGTTTAAATGGTCTAGAAATCGATTTAGACGAGSizeHit CountTotal NormTotal
No Reads
droBia1
GCAATCCGATGGCGATGATGACGATGAGGTCAACGGCAACGATTCCGACGAAGAAGGAGGTATGTATAGC--AAGGTCTTT-------------------GAC-----------------ATA-----------------------------TTACAAGCAA-----AAAT-CACAGAATTCA---GGA-GGGTACAT---------------------------------------------------TACTTTTAG------------------CTGTACCATCAAT----------------C---------------------------------------------------------GAA---------------------------GCTCATTGTCCGTCTGCTTAGTTT-CTCAAACGCCTTTT-G--GGGC-TCGC--------------------------------------------------------------------------------TTA-TC-ACAAAAAT-----------------GT--ATCACATTTTCAAC-ACTAGCTTCTGTCGCCTTT-CAGATAAGCG---------CAATGCCTTCTGTTTGAACGGTTTAGAAATCGATTTAGACGAGSizeHit CountTotal NormTotal
No Reads
droTak1
GCAATCCGATGGCGATGATGACGATGAGGTCAACGGCAACGACTCCGACGAAGAGGGAGGTATGTATCGC--CAGAACTTT----------------------------------------------C---------ATATA---------CTC-------ACAAAAAAAT-CTCAGAATTTA---GAA-GGGAACATTTTT---------------AAAAA-------------------C-------TACTCTTGG------------------CTTTACCATCACT----------------C---------------------------------------------------------TAA---------------------------GCTCATTGTCCGTCTGTTTAAA---------------------TGCT-TTGC-----------------------GC-TCACT-----------------------------------------------TGTAA-TCACCAAAAAT---------------------AGCCCATTTTCAAC-ACTAGCTTCTGTCGCCTTTGCAGATAAGCG---------CAATGCCTTCTGTTTGAATGGTTTAGAAATCGATTTAGACGAGSizeHit CountTotal NormTotal
No Reads
droEug1
GCAATCTGACGACGATGATGATGACGAGGTCAACGGCAACGATTCCGACGAAGAAGGAGGTATGTATTTT--AATAACTTTCATA-------AAACTCCG-----CAAT-------------------------------------------------------------T-GACAGAATTC-----------------------------------------------TTACATAACTAA----------------GA------------------TTTATCAGCATT----------------CACCAAAGA-TTT--------------------------------------------AAAA---------------------------ACTCATTGTCTGTCTGGTTATTTA-TTTCATTACTTTTT-G--GGGT-TTGT-----------------------GG-TTTCT-----------------------------------------------TGCGA-TCACCAAAAAC----------------------ATAAATTTTGAAA-ACTAGCTTCTGTCGCCTTT-CAGATAAGCG---------AAATGCATTCTGTTTGAATGGTTTAGAAATTGATTTAGACGAASizeHit CountTotal NormTotal
No Reads
dm3
GCAATCTGATGGCGATGATGATGATGAGGTCAACGGCAACGATTCCGACGAAGTGGGAGGTGTGTATTC-------------------------------GAC-----------------GTATTTAT---------AGAGA----------------CCAAAGATTAAAT-CGCAGAATTCA---GGA-G-----TTTTTTTTT--------TATAAAAGA-------------------TTTCCAT-----------------------------GTAACCACCATT----------------A---------------------------------------------------------AAA---------------------------TTCCATTGTCCGTCTGTTTAA----CTTAATCGCTTATT-G--TGAA-TCGC-----------------------GC-TTTCT-----------------------------------------------TCGTATT-AACAATAAT---------------------ATCATATACTCAAC-CGTGGCTTTTGTCGCCTTT-CAGATAAGTG---------CAATGCATTCTGTTTAAATGGTTTAGAGATCGATTTAGACGAGSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
..................TGATGATGAGGTCAACGGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1915.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000100000000000000000000000000
..............................CAACGGCAACGATTCCGACGAAGTA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2514.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............GATGATGATGATGAGGTCAACGGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2414.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000
.....CTGATGGCGATGATGATGAT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2014.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..............ATGATGATGATGAGGTCAACGGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2313.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000
....TCTGATGGCGATGATGATGATGAGGTC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2713.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000
............CGATGATGATGATGAGGTCAACGG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2413.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................ATGATGATGAGGTCAACGGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2013.0030000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000
.............GATGATGATGATGAGGTCAACG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2213.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........GGCGATGATGATGATGAGGTCAACGG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....TCTGATGGCGATGATGATGATGAGG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000110000000000000000000000000
.........TGGCGATGATGATGATGAGGTC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2213.0030000000000000000000001000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........GCGATGATGATGATGAGGTC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000
............CGATGATGATGATGAGGTCAACGGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..........GGCGATGATGATGATGAGGTC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....TCTGATGGCGATGATGATGATG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................TGATGAGGTCAACGGCAACGATTC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......GATGGCGATGATGATGATGAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......TGATGGCGATGATGATGATGAGGTC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000100000000000000
...................GATGATGAGGTCAACGGCAACGATTCC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......TGATGGCGATGATGATGATGAGG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000
................GATGATGATGAGGTCAAC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
........................TGAGGTCAACGGCAACGATTCCGAC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................GGCAACGATTCCGACGAAGTA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.............GATGATGATGATGAGGTCAAC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100
........ATGGCGATGATGATGATGAGGTC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000
..AATCTGATGGCGATGATGATGATGT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000
....................ATGATGAGGTCAACGGCAACGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................TGATGAGGTCAACGGCAACGATTCCGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....CTGATGGCGATGATGATGATG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
.CAATCTGATGGCGATGATGATG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....TCTGATGGCGATGATGATGATGAGGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................TGAGGTCAACGGCAACGAT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................TGAGGTCAACGGCAACGATTCC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
...................GATGATGAGGTCAACGGCA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................ATGATGATGAGGTCAACGGCAACGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........TGGCGATGATGATGATGAGGTCAAC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
..............................CAACGGCAACGATTCCGACG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAATGGTTTAGAGATCGAC.........2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............TGATGATGATGAGGTCAACGG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............ATGATGATGATGAGGTCAAC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................TGATGAGGTCAACGGCAACGAT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................TGAGGTCAACGGCAACGATTC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............CGATGATGATGATGAGGTC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................TGAGGTCAACGGCAACGATA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......GATGGCGATGATGATGATGAGGTC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....CTGATGGCGATGATGATGATGAGGTC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
............CGATGATGATGATGAGGTCAA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
......................GATGAGGTCAACGGCAACGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..AATCTGATGGCGATGATGATGATGA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................GCAACGATTCCGACGAAGTGGGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
................................ACGGCAACGATTCCGACGTG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
.............................TCAACGGCAACGATTCCGACGAAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAC-CGTGGCTTTTGTCGCCTT................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........TGGCGATGATGATGATGAGGTCAACG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
...................GATGATGAGGTCAACGGCAAC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................GATTCCGACGAAGTGGGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
.......................ATGAGGTCAACGGCAACGATTCC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................GGCAACGATTCCGACGAAGT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................GATGATGAGGTCAACGGCAACGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............TGATGATGATGAGGTCAAC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................ATGAGGTCAACGGCAACGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................TGTATTC-------------------------------GAC-----------------GTATTTAT---------AGAGA----------------CCA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
...ATCTGATGGCGATGATGATGATGAGGG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
.............GATGATGATGATGAGGTC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1821.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
.....................................AACGATTCCGACGAAGTGGGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
.CAATCTGATGGCGATGAT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000
..............ATGATGATGATGAGGTCAACGG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGCATTCTGTTTAAATGGTTTAGAGA..............2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................GATGATGATGAGGTCAACG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................GATGAGGTCAACGGCAACG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................ATGATGAGGTCAACGGCAAC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................GGTCAACGGCAACGATTCC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......GATGGCGATGATGATGATGAGGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
......................................................................................................................................................................TAAAT-CGCAGAATTCA---GGA-G-----TTTTTTT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............CGATGATGATGATGAGGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1820.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000
....TCTGATGGCGATGATGATG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1930.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
droSim2
GCAATCTGATGGCGATGATGATGATGAGGTCAACGGCAACGATTCCGACGAAGAAGGAGGTGGGTATTA-------------------------------GAT-----------------GTATTGTA---------ATAGA----------------GCAAAGATTCAAT-CGCAGAATTCA---GGA-T-----TTTTTT---------------AAAGA-------------------GAACCAT-----------------------------TTAACCACCATT----------------A---------------------------------------------------------GAA---------------------------TTCCATTGTCCGTCTGTTTAA----CCTAATCGCTTATT-G--TGGA-TCGC-----------------------GC-TTTCT-----------------------------------------------TCGTATT-ATCAATAAT---------------------ATCATATACTCAAC-CGTGGCTTTTGTCGCCTTT-CAGATAAGTG---------CAATGCATTCTGTTTAAATGGTTTAGAGATCGATTTAGACGAGSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
....TCTGATGGCGATGATGATGATGAGGTC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000001000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTGTTTAAATGGTTTAGAGATCGATT........2711.00100000010000000000
.............................TCAACGGCAACGATTCCGACGAAGAAGGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.00100000001000000000
...................................GCAACGATTCCGACGAAGAA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000010000000000
droSec2
GCAATCTGATGGCGATGATGATGATGAGGTCAACGGCAACGATTCCGACGAAGAAGGAGGTTGGTATTA-------------------------------GAT-----------------GTATTGTA---------ATAGA----------------GCAAAGATGCAAT-CGCAGAATTCA---GGA-T-----TTTTTTTTTT-----------TAAGA-------------------GAACCAT-----------------------------TTAACCACCATT----------------A---------------------------------------------------------GAA---------------------------TTCCATTGTCCGTCTGTTTAA----CCTAATCGCTTATT-G--TGGA-TCGC-----------------------AC-TTTCT-----------------------------------------------TCGTATT-AACAATTAT---------------------TTCATATACTCAAC-CGTGGCTTTTGTCGCCTTT-CAGATAAGTG---------CAATGCATTCTGTTTAAATGGTTTAGAGATCGATTTAGACGAGSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.....................................AACGATTCCGACGAAGAAGGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0021100
.....CTGATGGCGATGATGATGATGAGGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.0020020
.....CTGATGGCGATGATGATGATGAGGTC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010100
......TGATGGCGATGATGATGATGAGGTC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010100
...........GCGATGATGATGATGAGGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010010
.......................................CGATTCCGACGAAGAAGGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010010
.............GATGATGATGATGAGGTCAACGGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010100
...........................................TCCGACGAAGAAGGAGGTTGGTA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100
.......GATGGCGATGATGATGATGAGGTC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010010
.....................................AACGATTCCGACGAAGAAGGAGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010010
....TCTGATGGCGATGATGATG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1970.1410001
droYak3
GCAATCTGAGGGCGATGATGATGATGAGGTCAACGGCAACGATTCCGACGAAGAAGGAGGTTAGTATTC-------------------------------GGT-----------------GTATTGAT---------AGAGC----------------GCAAACATCAAAT---CAGAATTCA---GGA-G-----TTTTTTTTTA------TTAAAAAAGA-------------------TTGCCAT-----------------------------TTAACCGCCATT----------------A---------------------------------------------------------GAA---------------------------TTCCATTGTCCGTCTGTTTAA----CTTAATCGCTTTTT-G--TGGA-TCGC-----------------------GC-TTTCT-----------------------------------------------TCGTATT-AACTATAAT---------------------ATCATATACTGAAC-TCTGGCTTTTGTCGCCTTT-CAGATAAATG---------CAATGCGTTCTGTTTAAATGGTTTAGAAATCGATTTAGACGAASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.....................................AACGATTCCGACGAAGAAGGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000010000
..AATCTGAGGGCGATGATGATG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000010000
...ATCTGAGGGCGATGATGAT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100000010000
..................................GGCAACGATTCCGACGAAGAAGGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00101000000000
....................ATGATGAGGTCAACGGCAACG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100001000000
GCAATCTGAGGGCGATGAT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100000010000
GCAATCTGAGGGCGATGATGATGATGA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000010000
.............GATGATGATGATGAGGTCAACGGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000010000
...................GATGATGAGGTCAACGGCAAC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000100000
..AATCTGAGGGCGATGATGATGAT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100000010000
....................................CAACGATTCCGACGAAGAAGGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000010000
droEre2
GCAATCTGATGGCGATGATGATGATGAGGTCAACGGCAACGATTCCGACGAAGAAGGAGGTTGGTATTC-------------------------------GAT-----------------GTATTGAT---------AGACA----------------GCAAGCATTAAAT---CAGAATTCA---GGA-G-----TTTTTTTTTTTTTTTTTTTGAAAAGA-------------------TTGCCAT-----------------------------TTACCCACCATT----------------A---------------------------------------------------------GAA---------------------------TTCCATTGTCCGTCTGTTTAA----CTTTATCGCTTATT-G--TGGT-TCGC-----------------------GC-TTTCT-----------------------------------------------TCGTATT-AACAATAAT---------------------ATCATATATTCAAC-CTTGGCTTTTGTCGCCTTT-CAGATAAGTG---------CAATGCATTCTGTTTGAATGGTTTAGAAATCGATTTAGACGAGSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.............GATGATGATGATGAGGTC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1814.0040001210
..................................GGCAACGATTCCGACGAAGAAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.0020000200
......................GATGAGGTCAACGGCAACGATT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0011000000
.................................CGGCAACGATTCCGACGAAGAAGGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000100
................GATGATGATGAGGTCAACGGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010001000
..........GGCGATGATGATGATGAGGTC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000100
.............GATGATGATGATGAGGTCAACGGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000010
.........................................................................................................................................................................AT---CAGAATTCA---GGA-G-----TTTTTTTTTT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000100
........................TGAGGTCAACGGCAACGATTCCGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0011000000
........ATGGCGATGATGATGATGA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19140.0710000100
dp5
GCAGTCGGAGGGAGACGACGATGAAGAGGTCAACGGGAACGATTCTGAGGAAGAAG---GTGTGTATATAGCTAT-----GTAG---ATAAAGAAGTGGG-----GAGATTACAGACCTAT------------------------------------------------------------------------------------------------------------------CATCAA----------------GATTTGTCATATATATTTGT-----------TTGCATTGTCCGACTTCAGTT-----------------------------------------------------------------------AGT--------------------------------------TATCGCT-----------------AAATTATTATGATACAAAATGGTGC-TT--AGTCTCG-----------AAATCGGTTCTTCCATC-------------T-GTATTC-ACAAA-------------------------ACGCAT-CTCAAC-CTCAGCTTCTGTCGCCTTT-CAGATAAGCG---------CAATGCATTCTGTTTGAATGGGTTAGAAATCGATTTAGACGAGSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
..................................GGGAACGATTCTGAGGAAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1913.0030300000000
.............GACGACGATGAAGAGGTCAACGGGAACG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010100000000
..........GGAGACGACGATGAAGAGGTCAACGG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010100000000
droPer2
GCAGTCGGAGGGAGACGACGATGAAGAGGTCAACGGGAACGATTCTGAGGAAGAAG---GTATGTATATAGCTAT-----GTAG---ATAAAGAAGTGGG-----GAGATTACAGACCTAT------------------------------------------------------------------------------------------------------------------CATCAA----------------GATTTGTCATATATATTTGT-----------TTGCATTGTCCGACTTCAGTT-----------------------------------------------------------------------AGT--------------------------------------TATCGCT-----------------AAATTATTATGATACAAAATGGTGC-TT--AGTCTCG-----------AAATCGGTTCTTCCATC-------------T-GTATTC-ACAAA-------------------------ACGCAT-CTCAAC-CTCAGCTTCTGTCGCCTTT-CAGATAAGCG---------CAATGCATTCTGTTTGAATGGGTTAGAAATCGATTTAGACGAGSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.................ACGATGAAGAGGTCAACGGGAACGAT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.002200000
......................GAAGAGGTCAACGGGAACG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000001
........................AGAGGTCAACGGGAACGAT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001010000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGTTTGAATGGGTTAGAAA..............2011.001000001
droWil2
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTGTCGCCTTT-CAGATAAGCGAAGCAGCAGCAATGCCTTCTGTTTAAATGGTTTAGAATTCGATTTAGACGAASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGCGAAGCAGCAGCAATGCCTT..................................2311.00100010
droVir3
GCAATCGGAGGGCGATGACGATGAGGAGGTCAATGGCAATGACTCCGAGGTTGACG---GTACGTTTAC-------------------------------GCA-----------------TCATTCAT---------AGATG----------------ACATTTATCATAG---GGGAAACAA----------------------------------------------------------------------------CTTGTTACGC--TATTGC-----------TCTTGCTGATCGGTGTCAGCT-TCTGGTTT--------------------------------------------CAAA--------------AGTTGTTGCCACATTCCA-TGCCCGCCC-------------------------------------------------------------------TGTTTAGGATCTGATCTG---TTCAGTTATC-------------------GTA-----TCA-------------------------TACACAT-CTCAACACACAGATTCTGTCGCCTTT-CAGATGAGCG---------CAGTGCCTTCTGTGTAAATGGTTTAGAAATCGATTTAGACGAGSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.......GAGGGCGATGACGATGAGGAGGTCA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000000000000000000000000001000000000000000000000000000000000000
......................................ATGACTCCGAGGTTGACG---T......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000001000000000000000000000000000000000000000000000000000000000
..............................CAATGGCAATGACTCCGAGG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000001000000000000000000000000000000000000000000
...............................AATGGCAATGACTCCGAGGTTGACG---.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000000000000000000000000000000000000001000000000000000000000000
.............GATGACGATGAGGAGGTCA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000100000000000000000000000000000000000000000000000000000000000
.......GAGGGCGATGACGATGAGGAGGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000010000000000000000000000000000000000000000000000000000
...............................AATGGCAATGACTCCGAGGTTGAC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000000000000000000000000001000000000000000000000000000000000000
.....CGGAGGGCGATGACGATGAGG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000010
droMoj3
ACAATCGGAAGGTGATGATGATGATGAAGTCAATGGCAATGACTCCGAGGATGAAG---GTGTGTACCAC--AAAAGACAGCATTTC------------------------------------TCCA-AGGA---------ACTGCTAATAATTGCCA-------TAAATT-TGCTGTATTATACAG-----------------------------------------------------------AT-----------------------------CTAGCGATCGTT----------------C-TC---------ACTCATTGTTAGTTTCGTACTTCGGATCATAGTCACTCTCATTTC-------------------TTATTG-----------------------------------------------------TCAC-----------------------AT-TCCCTATTTGCGCTAAGATCAG---TTCAGTC--C-------------------ATA-----TCG-------------------------TATACAT-TACAATACACAGATTCTGTCGACTTT-CAGATGAGCC---------CAGTGCCTTCTGTGTAAATGGTTTAGAAATCGATTTAGACGAGSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
................................ATGGCAATGACTCCGAGGATGAAG---T......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001001000
............TGATGATGATGATGAAGTC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1920.501100000
droGri2
GCAGTCGGATGGCGATGACGATGAGGAGGTCAATGGCAATGACTCCGAGGATGAAG---GTTTGTATATATGCAT-----GTGT---ACA----------------------------------------------------------------------AAACATCCATT---CATAGTATA---AGATTTGTACA----------------------TGAGCAACTGTTGCATATCTGA----------------GC------------------CAGATCAATGTC----------------GTCTGTCTGTTTT--------------------------------------------G-AAAACCATCATCAGTTAG---------------------------------------------------G--CAGC-TAGG-----------------------AT-TTGAT---TCG-----------AAATTCGATTATC----------------------------CA-------------------------AACACAT-CTCAACACACAGATTCTGTCGCCTTT-CAGATGAGCG---------CAGTGCCTTCTGTGTAAATGGCTTAGAGATCGATTTAGACGAGSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
....TCGGATGGCGATGACGAT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00110
.................ACGATGAGGAGGTCAATGG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00101

Generated: 05/18/2015 at 03:23 AM