ID:

dan_1931

 Coordinate:

scaffold_13266:10427817-10427967 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-2.1 -1.9

Flybase annnotation

exon [dana_GLEANR_13231:1]; CDS [Dana\GF13217-cds]; intron [Dana\GF13217-in]

No Repeatable elements found

mature
star
  1. scaffold_9419:444-461 +
  2. dan_1931  scaffold_13266:10427887-10427904 +

Sense Strand Reads

--################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
CAATGGAGAAGAGAATAGAATTGGAGCGGCGCGCACGCAAAGCCAATCAGGTAAGTGTGATAACATAAACCACAAAAAAAAAACCGAAAAAACGCGGGATTACGAAAATGTCCTATACAACTATCTTTTTTTTTATTATTAAATCCCATTGTGTGAGTGCATCGGCATCGCCATCATGTAAAAATCTAGTTTCAATTTGTGTCGCCATAATAAAAAATAAAAAATGCTGGAAGGAGAGAAGCGACAGCGGC
************************************************************************************************************************.........................((..(((......)))..)).************************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total M058
embryo
 V105
male body		 M044
female body
 V055
head
 V039
embryo
 V106
head
................AGAATTGGAGCGGCGCGCACGCA.................................................................................................................................................................................................................... 23 0 1 1.00 1 1 0 0 0 0 0
......................................................................................................................................................................................................................................AAGGAGAGAAGCGACAGCGGC 21 0 1 1.00 1 0 1 0 0 0 0
.................GAATTGGAGCGGCGCGCA........................................................................................................................................................................................................................ 18 0 1 1.00 1 0 0 1 0 0 0
.................................................................................................................................................CCATTGTGTGAGTGCATCGGC..................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0
......................................................................................................................................................GTGTGAGTGCATCGGCATCGC................................................................................ 21 0 1 1.00 1 1 0 0 0 0 0
........................................................................................................................CTATCTTTTTTTTTATTA................................................................................................................. 18 0 2 0.50 1 0 0 0 0 1 0
.....................................................................................................................................................................................................................................GAAGTAGAGAAACGACAGC... 19 2 2 0.50 1 1 0 0 0 0 0
..........................................................................................................................................................................................................................AAGAAATTCTGGAAGGAGAGAT........... 22 3 2 0.50 1 0 0 0 1 0 0
...............................................................CATAATCCACCAAAAAAAAACCCA.................................................................................................................................................................... 24 3 2 0.50 1 1 0 0 0 0 0
.........................................................................................................................................................................................................................TAAAAAATGCTGGGATGAG............... 19 2 4 0.50 2 0 2 0 0 0 0
...........................................................................................................ATGTGCTATACTACTGTCTT............................................................................................................................ 20 3 6 0.33 2 0 1 1 0 0 0
...............................................................CATGAACCACAAAAAAAAAA........................................................................................................................................................................ 20 1 5 0.20 1 1 0 0 0 0 0
............................................................................................................................................................................................................................AAAACGCCGGAAGGAGAG............. 18 2 7 0.14 1 0 0 1 0 0 0
...................................................................AACCAGAAAAGAAAAACCGA.................................................................................................................................................................... 20 2 9 0.11 1 1 0 0 0 0 0
...........................................................ATAACAAAGACCACAAAAAAAA.......................................................................................................................................................................... 22 2 13 0.08 1 1 0 0 0 0 0
.........................................................................................................................................................TGAGGGCATCGGTATCG................................................................................. 17 2 15 0.07 1 0 0 0 1 0 0
.........................................................................................................................................................................................................................TAAAAATTGCTGGGATGAGA.............. 20 3 16 0.06 1 0 0 1 0 0 0
..................................................................AGACCACAAAAAAGAAACC...................................................................................................................................................................... 19 2 17 0.06 1 1 0 0 0 0 0
........................................................................................................................................................................................................................ATAAAAATTGCTGGGATGAG............... 20 3 18 0.06 1 0 0 1 0 0 0
..................................................................TAACCACCAAAAAAAAACC...................................................................................................................................................................... 19 2 19 0.05 1 1 0 0 0 0 0
................................................................ATAAACCACAAAAAGAAGA........................................................................................................................................................................ 19 2 20 0.05 1 1 0 0 0 0 0
.....................................................................................................................................................................................................................................GAAGGAAAGAAGCGCCACC... 19 3 20 0.05 1 1 0 0 0 0 0
..................................................................AAACCACCAAAAAAAAACCC..................................................................................................................................................................... 20 2 20 0.05 1 1 0 0 0 0 0
................................................................ATAAACCACAAGAAAACCAC....................................................................................................................................................................... 20 3 20 0.05 1 1 0 0 0 0 0
.........................................GCCAATCAGTGAGGTGTGA............................................................................................................................................................................................... 19 3 20 0.05 1 0 0 0 0 0 1
.........................................................................................................................................................................................................................TAAAAAATGCTGGGATGA................ 18 2 20 0.05 1 0 1 0 0 0 0
..................................................................ACACCACAGAAAAAAAACC...................................................................................................................................................................... 19 2 20 0.05 1 1 0 0 0 0 0
...............................................................................................................................................................................................................................AAGCTGGAAGAAGAGAAGAGA....... 21 3 20 0.05 1 0 1 0 0 0 0
...........................................................GTAACATAACCCACAAAGAAA........................................................................................................................................................................... 21 3 20 0.05 1 1 0 0 0 0 0
................................................................................................................................................................................................................................AGCTGGAAGGAGGGTAGCG........ 19 3 20 0.05 1 0 0 0 1 0 0
...............................................................CATACAACACTAAAAAAAAACC...................................................................................................................................................................... 22 3 20 0.05 1 1 0 0 0 0 0

Anti-sense strand reads

GTTACCTCTTCTCTTATCTTAACCTCGCCGCGCGTGCGTTTCGGTTAGTCCATTCACACTATTGTATTTGGTGTTTTTTTTTTGGCTTTTTTGCGCCCTAATGCTTTTACAGGATATGTTGATAGAAAAAAAAATAATAATTTAGGGTAACACACTCACGTAGCCGTAGCGGTAGTACATTTTTAGATCAAAGTTAAACACAGCGGTATTATTTTTTATTTTTTACGACCTTCCTCTCTTCGCTGTCGCCG
*************************************************************************************.........................((..(((......)))..)).************************************************************************************************************************ 		Read size # Mismatch Hit Count Total Norm Total M044
female body
 V105
male body		 V106
head
 M058
embryo
 V039
embryo
.............................................................................................................CAGGATATGTTGATAGAAAAAA........................................................................................................................ 22 0 1 1.00 1 0 1 0 0 0
.............................................................TTGTATTTGGTGTTTTTTTTT......................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0
......................................................................................................................................................................TAGCGGTAGTACATTTTTAG................................................................. 20 0 1 1.00 1 0 0 1 0 0
...........................................................................................................................................................................................................CGGTATTATTTTTTATGTT............................. 19 1 3 0.33 1 0 0 0 1 0
.............................................................................................CGCCCTACTGCTTAAACAGGA......................................................................................................................................... 21 3 4 0.25 1 0 0 0 1 0
..............................................................................................................................................................................GTACATTATTAGATCCCAG.......................................................... 19 3 7 0.14 1 0 0 0 0 1
...............................................................................................................................................................................TACATTCTTAGATCATAG.......................................................... 18 2 7 0.14 1 0 0 0 0 1
.............................................................................................................................................................................GGTACATTCTTAGATCATAG.......................................................... 20 3 9 0.11 1 0 0 0 0 1
.........................................................................................................................................................ACTCACGTAGCTGTAACTGT.............................................................................. 20 3 9 0.11 1 1 0 0 0 0
.............................................................................TTTTTTGAGTTTTTTGCGCC.......................................................................................................................................................... 20 2 17 0.06 1 0 1 0 0 0
................................................................................................................................AAAAAATAACCATTAAGGGTAAC.................................................................................................... 23 3 20 0.05 1 0 0 0 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droAna3 scaffold_13266:10427767-10428017 + dan_1931 CAATGGAGAAGAGAATAGAATTGGAGCGGCGCGCACGCAAAGCCAATCAGGTAAGT-G---------------------------------------------------------------TG------------------------ATAA---------CATAAAC------CACA-------A--A-AAAAA--------AACCGAA--------------------------------AAAACGC----------------------------------------------------------GGGATTACGAA--AATGTC---CT----ATACAACTATCTTTTTT----------TTT---ATT---AT-TAAATCC-CA-----------------------TT--GTG------TGA------GTG-------------CATCGGCA--------------------TCGCC-ATCATGTAAAAATCTAGTTTCAATTTGTGT------------------CGCCATAA---TA---AAA-------AATAAAA-AAT--GCTGG------AAGGAG-AGAAGCGAC---AGC---G--GC
droBip1 scf7180000396428:847066-847317 + CAATGGAGAAGAGAATAGAATTGGAGCGGCGCGCACGCAAAGCCAATCAGGTAAGT-G---------------------------------------------------------------TG------------------------ATAA---------CGTA------------A---AACAGGGA-AAAAA---------------AAACGCG-------------------------------------------------------------------------------------------GGATTACGAA--AATGTT---CT----GTACAA-------TTTT----------TTT---GTTTCCAT-TAAATCC-CA-----------------------TT--GTG------TGA------GTG-------------CATCGGCATCGCAA-----ACAACAG--TCGCC-ATCATGTA--AATCTAGTTTCAATTTGTGT------------------CGCCATATAAATA---AAA-------AGAAAAA-AAT--GCTGG------AAGCAG-AGAAGCGGC---AGC--AG----
droKik1 scf7180000302385:537127-537392 - CAATGGAGAAGAGAATAGAATTGGAGCGACGCGCACGCAAAGCAAATCAGGTAAGT-TC------------------------------------------------------------------------------------------------------------------------------T---GAGA---------------AAAACGCGCCACG-GC-----------------------------TTT---------------------------------------T-GTTT----TGGCATTACACA--AATCTTTTTCGTTTG--------------------------------------------AATTC-CG-------C----TGCGTGCC--TATGTGAG--------AGT----G-------CGAGAGTGCATCAACAGCGACA-----ACAACAACTGCGCC-ATCATGTA--AATCTAGTTTCAATTTGTGT---------------CGACGCCATAT---AA---AAAACAGA--A-----G-AGC--TCTGGATGAAGAAGAAGAAGAAGCAGC---AAA---GTAAC
droFic1 scf7180000453948:1688257-1688436 + CAATGGAGAAGAGAATAGAGCTGGAGCGTCGCGCACGCAAAGTAAATCAGGTAAG-----------------------------------------------------------------------------------------------------------------------------------------A---------------AAAACGCGCCATAAAA-----------------------------CTTA-------------------------------------------------------------------------------------------------------------------AAT-TAAAACC-TAAATTAAAC----GCAGTGTT--TGT--GTG------CGA------GTG-------------C---------------------------------ATCATGTA--AATCTAGTTTA----TGT---------------GTTGACGCCATAT---AA---AAG-------A-----G-AGC--AATGG------AAGA---AGAAGCAGC--------------
droEle1 scf7180000491214:475985-476185 + CGATGGAGAAGAGAATAGAACTGGAGCGACGCGCACGCAAAGTAAATCAGGTAAGA-C-------------------------------------------------------------------------------------------------------------------------------------AA---------------AAAACGCGCCATA-AA-----------------------------CTTA-------------------------------------------------------------------------------------------------------------------AAT-TAAAATTAAAAATTAGGC----CCATTGTT--TGT--GTG------TAA------GTG-------------CA-----------------------------TCCATCATGTA--AATCTAGTTTCAATTTGTGT-------------ATAAATGCCATAC---AA---CAT---GAGGA--------GC--GCTAG------AAGA---AGAAG-AGC---AGAGCCG----
droRho1 scf7180000777956:16400-16588 + CAATGGAGAAGAGAATAGAACTGGAGCGACGCGCCCGCAAAGTAAATCAGGTAAG-----------------------------------------------------------------------------------------------------------------------------------------A---------------AAAACGCGCCATA-AA-----------------------------CTTG-------------------------------------------------------------------------------------------------------------------GAA-TAAAATTATTAATTAAAC----CCAGCGTT--TGT--GTG------AGA------GTG-------------CA-----------------------------TC-ATCATGTA--AATCCAAGTTAAATTTGTGT-------------TTAAACGACAAAA---AA---GA--------G--------GC--GATGA------AAGA----ATAAAAGT---AGT---G----
droBia1 scf7180000301754:2807189-2807349 + CAATGGAGAAGAGAATAGAACTGGAGCGACGCGCACGCAAAGTAAATCAGGTAAGT-C----------------------------------------------------------------------------------------------------------------A-------------------------------AGGCGGAAAACGCGCCACA-AC-----------------------------TT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAAC-TTCAAGTA--CATTAAATATAAATTCGTGT-------------GTAGACGCCACAA---TATAAAAA----A--G-----A-TAT--GTGAG------AAGA---AGAAGCAGC---AGC--------
droTak1 scf7180000415795:88824-88999 - CAATGGAGAAGAGAATAGAACTGGAGCGACGCGCACGCAAAGTAAATCAGGTAAGT-C-----------------------------------------------------------------------------------------------------------------------------GAGAA-GAAAA---------------AAACGCGCCACA-AA-----------------------------CTTA-------------------------------------------------------------------------------------------------------------------GTT-TAAAACC-TAAATTAAA----------------GT-------------------------------------------------------------------------GTGTA--AATCTAGTTTCAATTTGTGT-------------ATAGACGCCATAT---AA---AAA----A--A-----G-AGC--GCTGG------AAGAAGAAGAAGCAGC--------------
droEug1 scf7180000409672:1343580-1343758 + CAATGGAGAAAAGAATAGAACTGGAGCGACGCGCACGCAAAGTAAATCAGGTATGT-A---------------------------------------------------------------------------------------------------------------------------------A-AAAAA---------------AAACGCGCCACA-AA-----------------------------CTTA-------------------------------------------------------------------------------------------------------------------AAT-TAAACCC-TAAATTAGAA----GCCATGTT--TGT--GTG------TCA------GTA-------------CA-----------------------------TCATCCATGTA--AATCTAGTTTCAATTTGGAT-------------TTAGACGCCATAT---AA---AA--------A-------------------------GA---AGAAG------------------
dm3 chr2R:13758675-13758883 - CAATGGAGAAGAGAATAGAACTGGAAAGACGCGCACGCAAAGTAAATCAGGTAAGC-T----------------------------------------------------------------------------------------------------------------AAATACA---AACGATGAAAAAAA---------------ACACGCGCCACA-AA-----------------------------CTTA-------------------------------------------------------------------------------------------------------------------AAT-TGAGGTC-CAAATTAAGT----GACGCTTT--CGT--GTG------TGT------GTG-------------CA-----------------------------TT-ATCATGTA--AATCTAGTTTCAATTTGTTC-------------ATAGACGACATAC---AA---AA--------A--------GTGCTACGG---------A---AGAAGCAGC---AAA---G----
droSim2 2r:14448553-14448760 - dsi_16191 CAATGGAGAAGAGAATAGAACTGGAAAGACGCGCACGCAAAGTAAATCAGGTAAGC-T----------------------------------------------------------------------------------------------------------------AAATACA---AACGAAGA-AAAAA---------------ACACGCGCCACA-AA-----------------------------CTTA-------------------------------------------------------------------------------------------------------------------AAT-TGAGGCC-CAAATTAAGT----GACGCTTT--CGT--GTG------TGT------GTG-------------CA-----------------------------TT-ATCATGTA--AATCTAGTTTCAATTTGTTC-------------ATAGACGCCATAG---GA---AA--------A--------GTGCTCGT---------GA---AGAAGCAGC---AAA---G----
droSec2 scaffold_1:11254379-11254586 - CAATGGAGAAGAGAATAGAACTGGAAAGACGCGCACGCAAAGTAAATCAGGTAAGC-T----------------------------------------------------------------------------------------------------------------AAATACA---AACGATGA-AAAAA---------------ACACGCGCCACA-AA-----------------------------CTTA-------------------------------------------------------------------------------------------------------------------AAT-TGAGGCC-CAAATTAAGT----GACGCTTT--CGT--GTG------TGT------GTG-------------CA-----------------------------TT-ATCATGTA--AATCTAGTTTCAATTTGTTC-------------ATAGACGCCATAG---GA---AA--------A--------GTGCTCGT---------GA---AGAAGCAGC---AAA---G----
droYak3 2R:15424113-15424318 + CAATGGAGAAGAGAATAGAACTGGAGCGACGCGCACGCAAAGTAAATCAGGTAAGC-A----------------------------------------------------------------------------------------------------------------AAATACA---A--GAACAAAAAAA---------------ACACGCGCCACA-AT-----------------------------CTTA-------------------------------------------------------------------------------------------------------------------AAT-TGAAGCC-CAAATTAAGT----GACTCTTT--CAT--GT--------GT------GTG-------------CA-----------------------------TT-ATCACGTA--AATCTAGTTTCAATTTGTGT-------------ATAGACGCCATAG---AA---AAA-------A--------GTGCTCGGC---------A---AGAAACAGC---AAA---G----
droEre2 scaffold_4845:7986169-7986369 - CAATGGAGAAGAGAATAGAACTGGAAAGACGCGCACGCAAAGTAAATCAGGTAAGC-A----------------------------------------------------------------------------------------------------------------AAATACA------------AAAAA---------------ACACGCGCCAGA-AA-----------------------------CTTA-------------------------------------------------------------------------------------------------------------------AAT-TAAAGCC-CAAATTAAGC----GACGCTTT--CGT--GTG------TGT------GTG-------------CA-----------------------------TT-ATCATGCA--AATCTAGTTTCAATTTGTGT-------------ATAGACGCCATAG---AG---AAA-------A--------GT--GCTGG------GA-A---AGAAGCAGC---AAA---G----
dp5 3:16573281-16573608 - dps_1257 CAATGGAGAAGAGAATAGAGTTGGAGCGGCGAGCACGGAAGGCGAACCAGGTGAGT-TG---TTTAGTTATATGCTTGC---------------------------------------------------------------------------------------------------------------------------AGCCGAAAACCGCGCAAAA-AT-----------------------------CCT-------------------------------------TTACATTT----TGTGATTACACAAAAATTTT---CATTCA-----AATTCCCTTTTCCGTGTCCGTCTCTGTGATT---GTGTTTGTCC-----------------------TATGT--GTA------TGT------GTGTAAGGCAGCAGTGCAGCAGCAGCGGGGCAGTTACAGCAACTACGCC-ATCATGTA--AATCTAGTTTCAATTTGTGTCGATGTCGCCCGACTCGACGCCATAT---AA---AAA-------A-----G-ATT--GCTGG------AAGA---AGAAGCAGCAGCAGAA--GCGAC
droPer2 scaffold_4:188326-188650 + dpe_1552 CAATGGAGAAGAGAATAGAGTTGGAGCGGCGAGCACGGAAGGCGAACCAGGTGAGT-TT------AGTTATATGCTTGC---------------------------------------------------------------------------------------------------------------------------AGCCGAAAACCGCGCAAAA-AT-----------------------------CCT-------------------------------------TTACATTA----TGTGATTACACAAAAATTTT---CATTCA-----AATTCCCTTTTCCGTGTCCGTCTCTGTGATT---GTGTTTGTCC-----------------------TATGT--GTA------TGT------GTGTATGGCAGCAGTGCAGCAGCAGCGGGGCAGTTACAGCAACTACGCC-ATCATGTA--AATCTAGTTTCAATTTGTGTCGATGTCGCCCGTCTCGACGCCATAT---AA---AAA-------A-----G-ATT--GCTGG------AAGA---AGAAGCAGCAGCAGAA--GCGAC
droWil2 scf2_1100000004558:2213176-2213505 - dwi_1518 CAATGGAGAAGAGAATAGAATTGGAGCGACGCGCACGCAAAGCAAATCAGGTAAGT-TT--ATTTAG---TGTGCTTGTGTATGTTTGTGTTT---TTGTTGTTGATATTTTTTTTCCTTTTGTATGGAAAGCATAGGTAAAAGTGGA--GAA-----------------AAATGTGGGAAACTAAGA-AAAAA---------------AAACGCGCAAAA---------------------------------T------GTTCATGTTGTTTTTTTTCTTCTCACATAGCTTTT-CT------TCTGATTACACA--AATTTT---CTTTCA----------------------------------------T-TACAAA------------GAC---------TATGT--CTTTGTGTGTGA------GTT-------------CAGCGGCAGCGGCG-----AC--TAACTACGCC-ATCATGTA--AATCTAGTTTCAATTTGTGT---------------CGTCGAC----------------------------------------------------------------------------
droVir3 scaffold_12875:15426278-15426589 + dvi_7086 CAATGGAAAAGAGAATAGAATTGGAGAGACGCGCACGCAAAGCGAACCAGGTAAGT-TC--ATT----TTTAAA-----------------AT---TTGTGATTGATATTG----------TGTAAAGAAA--------------------------GAAGGGGAGCGACAGAGACA---AACA------------------AGCCGAA--------------------------------AAAACGCGCAAAATTGAAT-------TTTTTTTTTTTTG--------------------TTGGCTGTGATTACACA--AATTTT---CA--------------------------------------------T-TACAAC------------GTG-----C----AAGTGTGTG------TGT------GTG-------------CA-----------------ACAACAACTACGCC-ATCATGTA--AATCTAGTTTCAATTTGTGCCGTTGTC------GTCGACGCCATAA---AA---AAG-------AGCGCAA-AGC--GCTGA------GCAA---AGAAGCGGC---AAA---T-AAC
droMoj3 scaffold_6496:8370810-8371094 - --ATGGAGAAGAGAATAGAATTGGAGAGACGCGCACGCAAAGCGAATCAGGTAAGT-TTTCTTTTTGTTTTAAACATGC-----------AATTTATT-----------------------------------------AAAGGTGGACGGAAGAAGGAAGCG-------AAGTGCA----------------------------------------------AAACAAATACAAGCCGAAAAAACGCGCAAAATTAAATAG-----TTTGTTTT--------------------T-TTTTTTGCTGTGATTACACA--AATTTT---CA-------------------------------------------------------------------------------AT--GTG------TGAGTGTGTGTG-------------CA-----------------ACAATAACTACGCC-ATCATGTA--AATCTAGTTTCAATTTGTGTCGCT---------GTCGACGCCATAA---AA---AG--------A--------GC--GC------------A---AAAAGC-----------------
droGri2 scaffold_15245:12227424-12227744 + ---TGGAAAAGAGAATAGAATTGGAAAGACGCGCACGCAAAGTGAACCAGGTAAGATTTT--CTTCGTCTTCCTCTTGC-----------TATTTATTGCTATTGATAATG----------TG------------------------ACAA---------AAAA------------A---AAAAAGGG-AAGAAAAACACCAAGCCAAAAAACGCGCAAAA--------------------------------CTTG---------------------------------GCTTTT-TT-------TTTATTACACA--AATTTT--------------------TTTTTTTGTATC----------------------AAC------------GCATAACGCT----TGTGTGTA------TGT------GTGTC-----------CTATAACA-----------ACAGCAACTACGCC-ATCATGTA--AATCTAGTTTCAGTTTGTGCCGTTGTC------GTTGACGCCATAA---AAA--AAG-------AGCGCAAAATC--ACTGA------AAGA---AGAAGCGGC--------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droAna3
CAATGGAGAAGAGAATAGAATTGGAGCGGCGCGCACGCAAAGCCAATCAGGTAAGT-G---------------------------------------------------------------TG------------------------ATAA---------CATAAAC------CACA-------A--A-AAAAA--------AACCGAA--------------------------------AAAACGC----------------------------------------------------------GGGATTACGAA--AATGTC---CT----ATACAACTATCTTTTTT----------TTT---ATT---AT-TAAATCC-CA-----------------------TT--GTG------TGA------GTG-------------CATCGGCA--------------------TCGCC-ATCATGTAAAAATCTAGTTTCAATTTGTGT------------------CGCCATAA---TA---AAA-------AATAAAA-AAT--GCTGG------AAGGAG-AGAAGCGAC---AGC---G--GCSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
................AGAATTGGAGCGGCGCGCACGCA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001010000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGGAG-AGAAGCGAC---AGC---G--GC2111.001000010
.................GAATTGGAGCGGCGCGCA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001100000
..............................................................................................................................................................................................................................................................................................................................................................................................C-CA-----------------------TT--GTG------TGA------GTG-------------CATCGGC...........................................................................................................................................................2111.001010000
.............................................................................................................................................................................................................................................................................................................................................................................................................................GTG------TGA------GTG-------------CATCGGCA--------------------TCGC..................................................................................................................................2111.001010000
....................................................................................................................................................................................................................................................................................................................................................CTATCTTTTTT----------TTT---ATT---A...........................................................................................................................................................................................................................................1820.501001000
droBip1
CAATGGAGAAGAGAATAGAATTGGAGCGGCGCGCACGCAAAGCCAATCAGGTAAGT-G---------------------------------------------------------------TG------------------------ATAA---------CGTA------------A---AACAGGGA-AAAAA---------------AAACGCG-------------------------------------------------------------------------------------------GGATTACGAA--AATGTT---CT----GTACAA-------TTTT----------TTT---GTTTCCAT-TAAATCC-CA-----------------------TT--GTG------TGA------GTG-------------CATCGGCATCGCAA-----ACAACAG--TCGCC-ATCATGTA--AATCTAGTTTCAATTTGTGT------------------CGCCATATAAATA---AAA-------AGAAAAA-AAT--GCTGG------AAGCAG-AGAAGCGGC---AGC--AG----SizeHit CountTotal NormTotal
No Reads
droKik1
CAATGGAGAAGAGAATAGAATTGGAGCGACGCGCACGCAAAGCAAATCAGGTAAGT-TC------------------------------------------------------------------------------------------------------------------------------T---GAGA---------------AAAACGCGCCACG-GC-----------------------------TTT---------------------------------------T-GTTT----TGGCATTACACA--AATCTTTTTCGTTTG--------------------------------------------AATTC-CG-------C----TGCGTGCC--TATGTGAG--------AGT----G-------CGAGAGTGCATCAACAGCGACA-----ACAACAACTGCGCC-ATCATGTA--AATCTAGTTTCAATTTGTGT---------------CGACGCCATAT---AA---AAAACAGA--A-----G-AGC--TCTGGATGAAGAAGAAGAAGAAGCAGC---AAA---GTAACSizeHit CountTotal NormTotal
No Reads
droFic1
CAATGGAGAAGAGAATAGAGCTGGAGCGTCGCGCACGCAAAGTAAATCAGGTAAG-----------------------------------------------------------------------------------------------------------------------------------------A---------------AAAACGCGCCATAAAA-----------------------------CTTA-------------------------------------------------------------------------------------------------------------------AAT-TAAAACC-TAAATTAAAC----GCAGTGTT--TGT--GTG------CGA------GTG-------------C---------------------------------ATCATGTA--AATCTAGTTTA----TGT---------------GTTGACGCCATAT---AA---AAG-------A-----G-AGC--AATGG------AAGA---AGAAGCAGC--------------SizeHit CountTotal NormTotal
No Reads
droEle1
CGATGGAGAAGAGAATAGAACTGGAGCGACGCGCACGCAAAGTAAATCAGGTAAGA-C-------------------------------------------------------------------------------------------------------------------------------------AA---------------AAAACGCGCCATA-AA-----------------------------CTTA-------------------------------------------------------------------------------------------------------------------AAT-TAAAATTAAAAATTAGGC----CCATTGTT--TGT--GTG------TAA------GTG-------------CA-----------------------------TCCATCATGTA--AATCTAGTTTCAATTTGTGT-------------ATAAATGCCATAC---AA---CAT---GAGGA--------GC--GCTAG------AAGA---AGAAG-AGC---AGAGCCG----SizeHit CountTotal NormTotal
No Reads
droRho1
CAATGGAGAAGAGAATAGAACTGGAGCGACGCGCCCGCAAAGTAAATCAGGTAAG-----------------------------------------------------------------------------------------------------------------------------------------A---------------AAAACGCGCCATA-AA-----------------------------CTTG-------------------------------------------------------------------------------------------------------------------GAA-TAAAATTATTAATTAAAC----CCAGCGTT--TGT--GTG------AGA------GTG-------------CA-----------------------------TC-ATCATGTA--AATCCAAGTTAAATTTGTGT-------------TTAAACGACAAAA---AA---GA--------G--------GC--GATGA------AAGA----ATAAAAGT---AGT---G----SizeHit CountTotal NormTotal
No Reads
droBia1
CAATGGAGAAGAGAATAGAACTGGAGCGACGCGCACGCAAAGTAAATCAGGTAAGT-C----------------------------------------------------------------------------------------------------------------A-------------------------------AGGCGGAAAACGCGCCACA-AC-----------------------------TT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAAC-TTCAAGTA--CATTAAATATAAATTCGTGT-------------GTAGACGCCACAA---TATAAAAA----A--G-----A-TAT--GTGAG------AAGA---AGAAGCAGC---AGC--------SizeHit CountTotal NormTotal
No Reads
droTak1
CAATGGAGAAGAGAATAGAACTGGAGCGACGCGCACGCAAAGTAAATCAGGTAAGT-C-----------------------------------------------------------------------------------------------------------------------------GAGAA-GAAAA---------------AAACGCGCCACA-AA-----------------------------CTTA-------------------------------------------------------------------------------------------------------------------GTT-TAAAACC-TAAATTAAA----------------GT-------------------------------------------------------------------------GTGTA--AATCTAGTTTCAATTTGTGT-------------ATAGACGCCATAT---AA---AAA----A--A-----G-AGC--GCTGG------AAGAAGAAGAAGCAGC--------------SizeHit CountTotal NormTotal
No Reads
droEug1
CAATGGAGAAAAGAATAGAACTGGAGCGACGCGCACGCAAAGTAAATCAGGTATGT-A---------------------------------------------------------------------------------------------------------------------------------A-AAAAA---------------AAACGCGCCACA-AA-----------------------------CTTA-------------------------------------------------------------------------------------------------------------------AAT-TAAACCC-TAAATTAGAA----GCCATGTT--TGT--GTG------TCA------GTA-------------CA-----------------------------TCATCCATGTA--AATCTAGTTTCAATTTGGAT-------------TTAGACGCCATAT---AA---AA--------A-------------------------GA---AGAAG------------------SizeHit CountTotal NormTotal
No Reads
dm3
CAATGGAGAAGAGAATAGAACTGGAAAGACGCGCACGCAAAGTAAATCAGGTAAGC-T----------------------------------------------------------------------------------------------------------------AAATACA---AACGATGAAAAAAA---------------ACACGCGCCACA-AA-----------------------------CTTA-------------------------------------------------------------------------------------------------------------------AAT-TGAGGTC-CAAATTAAGT----GACGCTTT--CGT--GTG------TGT------GTG-------------CA-----------------------------TT-ATCATGTA--AATCTAGTTTCAATTTGTTC-------------ATAGACGACATAC---AA---AA--------A--------GTGCTACGG---------A---AGAAGCAGC---AAA---G----SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
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........................................................................................................................................................................................................................................................................................................................................................................................TGAGGTC-CAAATTAAGT----GACG...............................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000
...........................GACGCGCACGCAAAGTAAATC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................GACGCTTT--CGT--GTG------TGT------GT................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTTTCAATTTGTTC-------------ATAGACGC.............................................................................2311.0010000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TT-ATCATGTA--AATCTAGTTTC...........................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAATTTGTTC-------------ATAGACGACA...........................................................................2011.0010000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................ACGCTTT--CGT--GTG------TGT------GTG-------------C.................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
.............AATAGAACTGGAAAGACGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AC---AA---AA--------A--------GTGCTACGG---------A---AGAAA..................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
............GAATAGAACTGGAAAGACGCGCACG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................AGAACTGGAAAGACGCGCACG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
.............AATAGAACTGGAAAGACGCGCA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........AGAGAATAGAACTGGAAAGACA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.............AATAGAACTGGAAAGACGCGCACGCAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............ATAGAACTGGAAAGACGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................AGAACTGGAAAGACGCGCACC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................GT--GTG------TGT------GTG-------------CA-----------------------------TT-ATCATG..........................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................GAAAGACGCGCACGCAAAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................AGACGCGCACGCAAAGTAAAT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTA--AATCTAGTTTCAATTTG.....................................................................................................2211.0010000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............GAATAGAACTGGAAAGACGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................GAACTGGAAAGACGCGCACGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................AGAACTGGAAAGACGCGCAC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...TGGAGAAGAGAATAGAACTG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAC---AA---AA--------A--------GTGCTACGG---------A---AGAAGCA................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AC---AA---AA--------A--------GTGCTACGG---------A---AGA....................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A---AA--------A--------GTGCTACGG---------A---AGAAGCAA...............2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGACATAC---AA---AA--------A--------GTGCTACGG---------A---AGA....................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
............GAATAGAACTGGAAAGACGCGCC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATGTA--AATCTAGTTTCAATT.......................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........AGAATAGAACTGGAAAGACG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAC---AA---AA--------A--------GTGCTACGG---------A---AGA....................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
............GAATAGAACTGGAAAGACGCGCG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................GTAAGC-T----------------------------------------------------------------------------------------------------------------AAATACA---AACGATG......................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
....................................................................................................................................................................................AACGATGAAAAAAA---------------ACACGCGT........................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
................................................................................................................................................................................................................................................................................................................................................................................................CAAATTAAGT----GACGCTTT--CG.......................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................T--GTG------TGT------GTG-------------CA-----------------------------TT-ATCATGT.........................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGACGACATAC---AA---AA--------A--------GTGC.........................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................CTTT--CGT--GTG------TGT------GTG-------------CA-----------------------------TT-A...............................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........GAGAATAGAACTGGAAAGACGCG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................TTA-------------------------------------------------------------------------------------------------------------------AAT-TGAGGTC-CAAATTAA.........................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA--------A--------GTGCTACGG---------A---AGAAGCA................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...............................................................................................................................................................................................................................................................TA-------------------------------------------------------------------------------------------------------------------AAT-TGAGGTC-CAAATTAAG........................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...............TAGAACTGGAAAGACGCGCACGCA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....GGAGAAGAGAATAGAACTGGAAA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................CAAAGTAAATCAGGTAAGC-T----------------------------------------------------------------------------------------------------------------A......................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA--------A--------GTGCTACGG---------A---AGAAGCAGC---G..........2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................T----GACGCTTT--CGT--GTG------TGT------GTG-------------C.................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA---AA--------A--------GTGCTACGG---------A---AGAAGCA................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
................................................................................................................................................................................................................................................................A-------------------------------------------------------------------------------------------------------------------AAT-TGAGGTC-CAAATTAAG........................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................TGGAAAGACGCGCACGCAAAGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTCAATTTGTTC-------------ATAGACGA.............................................................................2111.0010000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AC---AA---AA--------A--------GTGCTACGG---------A---AGAA...................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000
....GGAGAAGAGAATAGAACTGGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........AGAGAATAGAACTGGAAAGACGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................ACGCAAAGTAAATCAGGTAAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................AA-----------------------------CTTA-------------------------------------------------------------------------------------------------------------------AAT-TGAGGTC-CAAAT............................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA--------A--------GTGCTACGG---------A---AGAAGCAG...............2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTACGG---------A---AGAAGCAGC---AAA---G----2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
droSim2
CAATGGAGAAGAGAATAGAACTGGAAAGACGCGCACGCAAAGTAAATCAGGTAAGC-T----------------------------------------------------------------------------------------------------------------AAATACA---AACGAAGA-AAAAA---------------ACACGCGCCACA-AA-----------------------------CTTA-------------------------------------------------------------------------------------------------------------------AAT-TGAGGCC-CAAATTAAGT----GACGCTTT--CGT--GTG------TGT------GTG-------------CA-----------------------------TT-ATCATGTA--AATCTAGTTTCAATTTGTTC-------------ATAGACGCCATAG---GA---AA--------A--------GTGCTCGT---------GA---AGAAGCAGC---AAA---G----SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
...............TAGAACTGGAAAGACGCGCACGCAAAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2713.00300000002100000000
...........AGAATAGAACTGGAAAGACGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.00200000000000020000
..................................................................................................................................................................................................................................................................................................................................................................................................................CTTT--CGT--GTG------TGT------GTG-------------CA-----------------------------TT-................................................................................................................................2012.00200000200000000000
.............AATAGAACTGGAAAGACGCGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.00200000000010010000
..............ATAGAACTGGAAAGACGCGCAC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.00202000000000000000
...TGGAGAAGAGAATAGAACTGGAAAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000001000000000
...................................................TAAGC-T----------------------------------------------------------------------------------------------------------------AAATACA---AACGAAGA-....................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000000100000000
...........AGAATAGAACTGGAAAGACGCGCAC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000000000001000
...............TAGAACTGGAAAGACGCGCAC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000000000001000
..................AACTGGAAAGACGCGCACGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000000000001000
.............AATAGAACTGGAAAGACGCG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000000000001000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTC-------------ATAGACGCCATAG---GA---A...............................................................2011.00100000001000000000
..............ATAGAACTGGAAAGACGCGCA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000000000001000
..............ATAGAACTGGAAAGACGCGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000000000100000
...................................................................................................................................................................................................................................................................................................................................................................................................................TTT--CGT--GTG------TGT------GTG-------------CA-----------------------------TT-ATC.............................................................................................................................2211.00100001000000000000
................................GCACGCAAAGTAAATCAGGTA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000000100000000
droSec2
CAATGGAGAAGAGAATAGAACTGGAAAGACGCGCACGCAAAGTAAATCAGGTAAGC-T----------------------------------------------------------------------------------------------------------------AAATACA---AACGATGA-AAAAA---------------ACACGCGCCACA-AA-----------------------------CTTA-------------------------------------------------------------------------------------------------------------------AAT-TGAGGCC-CAAATTAAGT----GACGCTTT--CGT--GTG------TGT------GTG-------------CA-----------------------------TT-ATCATGTA--AATCTAGTTTCAATTTGTTC-------------ATAGACGCCATAG---GA---AA--------A--------GTGCTCGT---------GA---AGAAGCAGC---AAA---G----SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C-------------ATAGACGCCATAG---GA---AA--------A--------GT...........................................2111.0010100
.........................................................................................................................................................................................................................................................................................................................................................................................................T----GACGCTTT--CGT--GTG------TGT------GTG-------------..................................................................................................................................................................2111.0010010
.....................................................................................................................................................................................................................................................................................................................................................................................................TAAGT----GACGCTTT--CGT--GTG------TGT------..................................................................................................................................................................................2211.0010100
.........AGAGAATAGAACTGGAAAGAC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0011000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGTTC-------------ATAGACGCCATAG---G....................................................................2111.0010100
......................................................................................................................................................................................................................................................................................................................................................................................................AAGT----GACGCTTT--CGT--GTG------TGT------..................................................................................................................................................................................2111.0010001
.................GAACTGGAAAGACGCGCACGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0011000
.....................................................................................................................................................................................................................................................................................................................................................................................................TAAGT----GACGCTTT--CGT--GTG------TG.........................................................................................................................................................................................2111.0010010
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCAATTTGTTC-------------ATAGACGCC............................................................................2111.0010001
........................AAAGACGCGCACGCAAAGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010001
...........AGAATAGAACTGGAAAGACG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010001
.............AATAGAACTGGAAAGACGCGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010010
droYak3
CAATGGAGAAGAGAATAGAACTGGAGCGACGCGCACGCAAAGTAAATCAGGTAAGC-A----------------------------------------------------------------------------------------------------------------AAATACA---A--GAACAAAAAAA---------------ACACGCGCCACA-AT-----------------------------CTTA-------------------------------------------------------------------------------------------------------------------AAT-TGAAGCC-CAAATTAAGT----GACTCTTT--CAT--GT--------GT------GTG-------------CA-----------------------------TT-ATCACGTA--AATCTAGTTTCAATTTGTGT-------------ATAGACGCCATAG---AA---AAA-------A--------GTGCTCGGC---------A---AGAAACAGC---AAA---G----SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
........................AGCGACGCGCACGCAAAGTAAATCAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2616.00600000000006
..............................................................................................................................................................................................................................................................................................................................................................................................C-CAAATTAAGT----GACTCTTT--C........................................................................................................................................................................................................2011.00101000000000
..................AACTGGAGCGACGCGCACGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100100000000
..ATGGAGAAGAGAATAGAACTGGAGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000010000
...........AGAATAGAACTGGAGCGACGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000000000
.......GAAGAGAATAGAACTGGAGCGACGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000010000
.................GAACTGGAGCGACGCGCACGCA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000010000
....................................................................................................................................................................................................................................................................................................................................................................................AAT-TGAAGCC-CAAATTAAGT----G..................................................................................................................................................................................................................2111.00101000000000
.AATGGAGAAGAGAATAGAACTGGAGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000010000
.............AATAGAACTGGAGCGACGCGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000010000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTTTCAATTTGTGT-------------ATAGA................................................................................2011.00101000000000
.................GAACTGGAGCGACGCGCC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100010000000
droEre2
CAATGGAGAAGAGAATAGAACTGGAAAGACGCGCACGCAAAGTAAATCAGGTAAGC-A----------------------------------------------------------------------------------------------------------------AAATACA------------AAAAA---------------ACACGCGCCAGA-AA-----------------------------CTTA-------------------------------------------------------------------------------------------------------------------AAT-TAAAGCC-CAAATTAAGC----GACGCTTT--CGT--GTG------TGT------GTG-------------CA-----------------------------TT-ATCATGCA--AATCTAGTTTCAATTTGTGT-------------ATAGACGCCATAG---AG---AAA-------A--------GT--GCTGG------GA-A---AGAAGCAGC---AAA---G----SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGTTTCAATTTGTGT-------------ATAG.................................................................................2012.0021000100
..........GAGAATAGAACTGGAAAGACGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000010
..ATGGAGAAGAGAATAGAACTGGAAAGA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000100
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAGACGCCATAG---AG---AAA-------A--------G............................................2011.0010000100
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGTGT-------------ATAGACGCCATAG---AG---T...............................................................2211.0011000000
..............ATAGAACTGGAAAGACGCGCAC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0011000000
.............................................................................................................................................................................................AAAAA---------------ACACGCGCCAGA-AA-----------------------------CT..................................................................................................................................................................................................................................................................................................................................................................2111.0010000100
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCATAG---AG---AAA-------A--------GT--GCTGG------GA-...........................2111.0010000100
................................................................................................................................................................................................................................................................................................................................................................................................................CGCTTT--CGT--GTG------TGT------GTG-------------C.................................................................................................................................................................1911.0010000010
.AATGGAGAAGAGAATAGAACTGGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0011000000
dp5
CAATGGAGAAGAGAATAGAGTTGGAGCGGCGAGCACGGAAGGCGAACCAGGTGAGT-TG---TTTAGTTATATGCTTGC---------------------------------------------------------------------------------------------------------------------------AGCCGAAAACCGCGCAAAA-AT-----------------------------CCT-------------------------------------TTACATTT----TGTGATTACACAAAAATTTT---CATTCA-----AATTCCCTTTTCCGTGTCCGTCTCTGTGATT---GTGTTTGTCC-----------------------TATGT--GTA------TGT------GTGTAAGGCAGCAGTGCAGCAGCAGCGGGGCAGTTACAGCAACTACGCC-ATCATGTA--AATCTAGTTTCAATTTGTGTCGATGTCGCCCGACTCGACGCCATAT---AA---AAA-------A-----G-ATT--GCTGG------AAGA---AGAAGCAGCAGCAGAA--GCGACSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...................GTTGGAGCGGCGAGCACGGAAGGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.0020100001000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA-------A-----G-ATT--GCTGG------AAGA---AGA....................1912.0020200000000
.........................GCGGCGAGCACGGAAGGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.0020200000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTGTGTCGATGTCGCCCGA.....................................................................................2112.0020100100000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGATGTCGCCCGACTCGACGC.............................................................................2112.0020200000000
...............................................................................................................................................................................................................................................................................................................................AATTTT---CATTCA-----AATTCCCT......................................................................................................................................................................................................................................................................2011.0010100000000
.....................................GAAGGCGAACCAGGTGAGT-TG---...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCAATTTGTGTCGATGTCGC.........................................................................................2111.0010100000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAGGCAGCAGTGCAGCAGC...........................................................................................................................................................2011.0010100000000
...............................................................................................................................................................................................................................................................................................................................................................................ATT---GTGTTTGTCC-----------------------TATGT--GTA------...........................................................................................................................................................................................2111.0010100000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAATTTGTGTCGATGTCGCC........................................................................................2111.0010100000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TT--GCTGG------AAGA---AGAAGCAGC..............2011.0010000001000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGGGCAGTTACAGCAACTAC....................................................................................................................................2111.0010000001000
....................TTGGAGCGGCGAGCACGGAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
.................GAGTTGGAGCGGCGAGCACGGAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000010000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGTGCAGCAGCAGCGGGGC...................................................................................................................................................2111.0010100000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGATGTCGCCCGACTCGACG..............................................................................2111.0010100000000
.........................................................................................................................................................................................................................................................................................................................................................................................TTGTCC-----------------------TATGT--GTA------TGT------GTGT..............................................................................................................................................................................2111.0010000001000
..................................................................................................................................................................................................................................................................................................................................................................GTCCGTCTCTGTGATT---GTGTT.......................................................................................................................................................................................................................................2111.0010000001000
....................TTGGAGCGGCGAGCACGGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGTGCAGCAGCAGCGGG.....................................................................................................................................................2011.0010100000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGTGTCGATGTCGCCCGAC....................................................................................2011.0010000001000
...........................................................................................................................................................................................................................................................................................................................................TCA-----AATTCCCTTTTCCGTGTC............................................................................................................................................................................................................................................................2111.0010000001000
droPer2
CAATGGAGAAGAGAATAGAGTTGGAGCGGCGAGCACGGAAGGCGAACCAGGTGAGT-TT------AGTTATATGCTTGC---------------------------------------------------------------------------------------------------------------------------AGCCGAAAACCGCGCAAAA-AT-----------------------------CCT-------------------------------------TTACATTA----TGTGATTACACAAAAATTTT---CATTCA-----AATTCCCTTTTCCGTGTCCGTCTCTGTGATT---GTGTTTGTCC-----------------------TATGT--GTA------TGT------GTGTATGGCAGCAGTGCAGCAGCAGCGGGGCAGTTACAGCAACTACGCC-ATCATGTA--AATCTAGTTTCAATTTGTGTCGATGTCGCCCGTCTCGACGCCATAT---AA---AAA-------A-----G-ATT--GCTGG------AAGA---AGAAGCAGCAGCAGAA--GCGACSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGTGTCGATGTCGCCCGTC....................................................................................2111.001000010
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTCGATGTCGCCCGTCTC..................................................................................1911.001010000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCAGCAGCAGCGGGGCAGT................................................................................................................................................2111.001000001
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTAGTTTCAATTTGTGTCGAT..............................................................................................2111.001000001
..........................................................................................................................................................................................................................................................................................................................................................................................TGTCC-----------------------TATGT--GTA------TGT------GTGTA.............................................................................................................................................................................2111.001000001
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGTCGATGTCGCCCGTC....................................................................................1911.001010000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGCAGCGGGGCAGTTA..............................................................................................................................................2011.001010000
..................AGTTGGAGCGGCGAGCACGGAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000010
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGTGCAGCAGCAGCGG......................................................................................................................................................2011.001010000
........................................................................................................................................................................................................................................................................................................................................................................................................................TGT--GTA------TGT------GTGTATGGCAGC......................................................................................................................................................................2111.001000001
........AAGAGAATAGAGTTGGAGCGG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001010000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTGTGTCGATGTCGCCCGT.....................................................................................2111.001000010
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTCGATGTCGCCCGTCTCGT................................................................................2111.001010000
CAATGGAGAAGAGAATAGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1920.501000001
droWil2
CAATGGAGAAGAGAATAGAATTGGAGCGACGCGCACGCAAAGCAAATCAGGTAAGT-TT--ATTTAG---TGTGCTTGTGTATGTTTGTGTTT---TTGTTGTTGATATTTTTTTTCCTTTTGTATGGAAAGCATAGGTAAAAGTGGA--GAA-----------------AAATGTGGGAAACTAAGA-AAAAA---------------AAACGCGCAAAA---------------------------------T------GTTCATGTTGTTTTTTTTCTTCTCACATAGCTTTT-CT------TCTGATTACACA--AATTTT---CTTTCA----------------------------------------T-TACAAA------------GAC---------TATGT--CTTTGTGTGTGA------GTT-------------CAGCGGCAGCGGCG-----AC--TAACTACGCC-ATCATGTA--AATCTAGTTTCAATTTGTGT---------------CGTCGAC----------------------------------------------------------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
..........................................................T--ATTTAG---TGTGCTTGTGTATG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.00201010
............................................................................TGTGTATGTTTGTGTTT---TTGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100100
.........................................................TT--ATTTAG---TGTGCTTGTGTAT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100001
...................................................................................................................................................................................................................ACGCGCAAAA---------------------------------T------GTTCATGTTG..................................................................................................................................................................................................................................................................................................................................................2111.00101000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................GTGA------GTT-------------CAGCGGCAGCGGCG-----...............................................................................................................................................2111.00101000
................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGTGTGA------GTT-------------CAGCGGCAG.........................................................................................................................................................2111.00100010
...........................................................................................................................................AAAAGTGGA--GAA-----------------AAATGTGGGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100010
........................................................................................................................................................................................................................................................................................................................................................................................................................................A------GTT-------------CAGCGGCAGCGGCG-----AC--T..........................................................................................................................................2111.00101000
...................................................................................GTTTGTGTTT---TTGTTGTTGAT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000
....GGAGAAGAGAATAGAATTGGAGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00101000
...................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTGA------GTT-------------CAGCGGCAGCGG......................................................................................................................................................2111.00101000
..ATGGAGAAGAGAATAGAATTGGAGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100010
......................................................................................................................................................................................................................................................................................................................................................................................................................................TGA------GTT-------------CAGCGGCAGCGGCG-----A..............................................................................................................................................2111.00101000
....................................................................................................................................................................................................................................................................................TTTCTTCTCACATAGCTTTT-CT------TCTGAT..........................................................................................................................................................................................................................................................................................................2811.00101000
.............................................................................................................................................AAGTGGA--GAA-----------------AAATGTGGGAATT..........................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100001
.................................................................................ATGTTTGTGTTT---TTGTTGTTG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100010
................AGAATTGGAGCGACGCGCACG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100001
.................................CACGCAAAGCAAATCAGGTA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2020.50100001
droVir3
CAATGGAAAAGAGAATAGAATTGGAGAGACGCGCACGCAAAGCGAACCAGGTAAGT-TC--ATT----TTTAAA-----------------AT---TTGTGATTGATATTG----------TGTAAAGAAA--------------------------GAAGGGGAGCGACAGAGACA---AACA------------------AGCCGAA--------------------------------AAAACGCGCAAAATTGAAT-------TTTTTTTTTTTTG--------------------TTGGCTGTGATTACACA--AATTTT---CA--------------------------------------------T-TACAAC------------GTG-----C----AAGTGTGTG------TGT------GTG-------------CA-----------------ACAACAACTACGCC-ATCATGTA--AATCTAGTTTCAATTTGTGCCGTTGTC------GTCGACGCCATAA---AA---AAG-------AGCGCAA-AGC--GCTGA------GCAA---AGAAGCGGC---AAA---T-AACSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGTGCCGTTGTC------GTCGAC...............................................................................1912.002000000000000000000000000000000000000000000000000000000000000002
................AGAATTGGAGAGACGCGCACGCAAAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000000000000000000100000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGACGCCATAA---AA---AAG-------AGCGC.................................................2111.001000000000000000000000001000000000000000000000000000000000000000
.....................TGGAGAGACGCGCACGCAAAGCG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000100000000000000000000000000000000000000000000000
...TGGAAAAGAGAATAGAATTGGAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000100000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGCCGTTGTC------GTCGACGCC............................................................................2111.001000000000000000000000000000000000100000000000000000000000000000
............GAATAGAATTGGAGAGACGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000010000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATAA---AA---AAG-------AGCGCAA-AGC--GCTGA------GC............................2711.001000000000000000000100000000000000000000000000000000000000000000
.....................................................................................................ATTGATATTG----------TGTAAAGAAA--------------------------G...................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000100000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTCAATTTGTGCCGTTGTC------G....................................................................................2111.001000000000000000000000000000000000000001000000000000000000000000
..ATGGAAAAGAGAATAGAATT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000010000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGTGCCGTTGTC------GTCGACGCCATAA---AA---AAG-------AGCGC.................................................3611.001000000000000000000000000000000000000000000000000000000000010000
......AAAAGAGAATAGAATTGGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000010000000000000000000000000000000000000000000000000
..............ATAGAATTGGAGAGACGCGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000000000000000000000000000000000000000000000000000000000000
........AAGAGAATAGAATTGGAGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000001000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................A--------------------------------AAAACGCGCAAAATTGAAT-------TAAA..................................................................................................................................................................................................................................................................................................................................................2450.201000000000000000000000000000000000010000000000000000000000000000
droMoj3
--ATGGAGAAGAGAATAGAATTGGAGAGACGCGCACGCAAAGCGAATCAGGTAAGT-TTTCTTTTTGTTTTAAACATGC-----------AATTTATT-----------------------------------------AAAGGTGGACGGAAGAAGGAAGCG-------AAGTGCA----------------------------------------------AAACAAATACAAGCCGAAAAAACGCGCAAAATTAAATAG-----TTTGTTTT--------------------T-TTTTTTGCTGTGATTACACA--AATTTT---CA-------------------------------------------------------------------------------AT--GTG------TGAGTGTGTGTG-------------CA-----------------ACAATAACTACGCC-ATCATGTA--AATCTAGTTTCAATTTGTGTCGCT---------GTCGACGCCATAA---AA---AG--------A--------GC--GC------------A---AAAAGC-----------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.....................................................................TTAAACATGC-----------AATTTATT-----------------------------------------AAA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
droGri2
---TGGAAAAGAGAATAGAATTGGAAAGACGCGCACGCAAAGTGAACCAGGTAAGATTTT--CTTCGTCTTCCTCTTGC-----------TATTTATTGCTATTGATAATG----------TG------------------------ACAA---------AAAA------------A---AAAAAGGG-AAGAAAAACACCAAGCCAAAAAACGCGCAAAA--------------------------------CTTG---------------------------------GCTTTT-TT-------TTTATTACACA--AATTTT--------------------TTTTTTTGTATC----------------------AAC------------GCATAACGCT----TGTGTGTA------TGT------GTGTC-----------CTATAACA-----------ACAGCAACTACGCC-ATCATGTA--AATCTAGTTTCAGTTTGTGCCGTTGTC------GTTGACGCCATAA---AAA--AAG-------AGCGCAAAATC--ACTGA------AAGA---AGAAGCGGC--------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
.......................GAAAGACGCGCACGCAAAGTG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00110
.................................................................................................................................................................................................................AAACGCGCAAAA--------------------------------CTTG---------------------------------GCTTT..........................................................................................................................................................................................................................................................................................................................2111.00110

Generated: 05/18/2015 at 03:22 AM