ID:

dan_1787

 Coordinate:

scaffold_13266:4888446-4888596 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-8.4 -8.3 -8.2

Flybase annnotation

exon [dana_GLEANR_12127:3]; CDS [Dana\GF12116-cds]; intron [Dana\GF12116-in]

Repeatable elements

NameClassFamilyStrand
Helitron-2_DVirRCHelitron+
Hoana1DNAhAT-hobo-
mature
  1. scaffold_3722:6069-6094 -
  2. scaffold_11349:45086-45111 -
  3. scaffold_12671:173964-173989 -
  4. scaffold_12839:1993-2018 -
  5. scaffold_13034:1927147-1927172 -
  6. scaffold_13082:821264-821289 -
  7. scaffold_13089:218792-218817 -
  8. scaffold_13099:596625-596650 -
  9. scaffold_13099:1044470-1044495 -
  10. scaffold_13137:152302-152327 -
  11. scaffold_13165:220554-220579 -
  12. scaffold_13165:262532-262557 -
  13. scaffold_13228:914116-914141 -
  14. scaffold_13248:4226201-4226226 -
  15. dan_1787  scaffold_13266:4888492-4888517 -
  16. scaffold_13272:230113-230138 -
  17. scaffold_13340:8580801-8580826 -
  18. scaffold_13767:109529-109554 -
  19. scaffold_13767:123829-123854 -
  20. scaffold_13770:471160-471185 -
star
  1. scaffold_9661:4057-4077 -
  2. scaffold_12671:43769-43789 -
  3. scaffold_12911:1699908-1699928 -
  4. scaffold_12913:135131-135151 -
  5. scaffold_12928:478349-478369 -
  6. scaffold_13034:663157-663177 -
  7. scaffold_13077:121773-121793 -
  8. scaffold_13082:3829044-3829064 -
  9. scaffold_13099:1708720-1708740 -
  10. scaffold_13099:1905962-1905982 -
  11. scaffold_13230:2738080-2738100 -
  12. scaffold_13250:485080-485100 -
  13. scaffold_13333:815672-815692 -
  14. scaffold_13339:876241-876261 -
  15. scaffold_13339:877142-877162 -
  16. scaffold_13339:1917656-1917676 -
  17. scaffold_13339:2679970-2679990 -
  18. scaffold_13499:829343-829363 -
  19. scaffold_13499:840671-840691 -
  20. scaffold_13499:953599-953619 -
  21. scaffold_3985:5419-5439 +
  22. scaffold_9742:4935-4955 +
  23. scaffold_11590:33487-33507 +
  24. scaffold_12671:140425-140445 +
  25. scaffold_13045:338788-338808 +
  26. scaffold_13045:1110526-1110546 +
  27. scaffold_13077:204836-204856 +
  28. scaffold_13111:1341203-1341223 +
  29. scaffold_13168:40395-40415 +
  30. scaffold_13230:2650616-2650636 +
  31. scaffold_13230:3180760-3180780 +
  32. scaffold_13248:3986120-3986140 +
  33. scaffold_13266:15919927-15919947 +
  34. scaffold_13266:19806195-19806215 +
  35. dan_2810  scaffold_13339:2216854-2216874 +
  36. scaffold_13340:1899774-1899794 +
  37. scaffold_13417:4016797-4016817 +
  38. scaffold_13499:378172-378192 +
  39. scaffold_13499:381667-381687 +
  40. scaffold_13499:388065-388085 +
  41. scaffold_3708:2840-2860 +
  42. scaffold_9424:22-42 +
  43. scaffold_12605:14873-14893 +
  44. scaffold_12911:1837336-1837356 +
  45. scaffold_12916:15584632-15584652 +
  46. scaffold_12943:1042214-1042234 +
  47. scaffold_12947:512729-512749 +
  48. scaffold_13034:1081163-1081183 +
  49. scaffold_13079:136979-136999 +
  50. scaffold_13082:983107-983127 +
  51. scaffold_13082:987028-987048 +
  52. scaffold_13089:54962-54982 +
  53. scaffold_13099:614824-614844 +
  54. scaffold_13099:2675731-2675751 +
  55. scaffold_13165:399385-399405 +
  56. scaffold_13258:1346649-1346669 +
  57. scaffold_13266:18701294-18701314 +
  58. scaffold_13272:301249-301269 +
  59. scaffold_13339:4112430-4112450 +
  60. scaffold_13767:1078422-1078442 +
  61. scaffold_343:1523-1543 -
  62. scaffold_3860:155-175 -
  63. scaffold_9013:791-811 -
  64. scaffold_12671:27186-27206 -
  65. scaffold_12671:174004-174024 -
  66. scaffold_12911:1493805-1493825 -
  67. scaffold_13089:218832-218852 -
  68. scaffold_13099:596665-596685 -
  69. scaffold_13099:615776-615796 -
  70. scaffold_13099:1044510-1044530 -
  71. scaffold_13165:220594-220614 -
  72. scaffold_13165:262572-262592 -
  73. scaffold_13250:718793-718813 -
  74. scaffold_13260:1802939-1802959 -
  75. dan_1787  scaffold_13266:4888532-4888552 -
  76. scaffold_13276:50582-50602 -
  77. scaffold_13337:21668935-21668955 -
  78. scaffold_13339:4257632-4257652 -
  79. scaffold_13340:3492277-3492297 -
  80. scaffold_13340:18018479-18018499 -
  81. scaffold_298:1096-1116 +
  82. scaffold_9025:674-694 +
  83. scaffold_10513:124215-124235 +
  84. scaffold_10764:515-535 +
  85. scaffold_12911:1613965-1613985 +
  86. scaffold_13034:787861-787881 +
  87. scaffold_13043:467394-467414 +
  88. scaffold_13043:504194-504214 +
  89. scaffold_13099:222935-222955 +
  90. scaffold_13111:43521-43541 +
  91. scaffold_13165:79880-79900 +
  92. scaffold_13230:3524132-3524152 +
  93. scaffold_13250:1354475-1354495 +
  94. scaffold_13258:189681-189701 +
  95. scaffold_13260:2090110-2090130 +
  96. dan_3145  scaffold_13340:17500077-17500097 +
  97. scaffold_13417:5127953-5127973 +
  98. scaffold_13417:6771602-6771622 +
  99. scaffold_13744:203402-203422 +
  100. scaffold_13767:1523155-1523175 +
  101. scaffold_8908:640-660 -
  102. scaffold_9339:8122-8142 -
  103. scaffold_10149:2098-2118 -
  104. scaffold_10675:900-920 -
  105. scaffold_13248:407517-407537 -
  106. scaffold_13248:2315537-2315557 -
  107. scaffold_13248:3062046-3062066 -
  108. scaffold_13248:3902176-3902196 -
  109. scaffold_13266:2901054-2901074 -
  110. scaffold_13266:18034860-18034880 -
  111. scaffold_13337:5371050-5371070 -
  112. scaffold_13337:7208493-7208513 -
  113. scaffold_13337:15853493-15853513 -
  114. scaffold_13337:21483616-21483636 -
  115. scaffold_13340:1653013-1653033 -
  116. scaffold_13340:13984266-13984286 -
  117. scaffold_13340:14663143-14663163 -
  118. scaffold_13417:258036-258056 -
  119. scaffold_13417:5258302-5258322 -
  120. scaffold_13499:546151-546171 -

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
CAGACAGACGGACAGACGGACCGACGGACAGACGGACAGACGGACATGCTTATATCGACTCAGGAGGTGATCCTGATCAAGAATATATATACTTTATAGGGTCGGAGATGTCTCCTTCACTGCGTTGCACACTTTTGACCAAAATTATAATACCCTCTGCAAGGGTATAAAAAGGATGAAACTTATAATCTACTATTACAGGTTCCCAAGTCCAAAGTGCAGACTTACCACCAGAAAAGCTCAAGATATTC
**********************************************************************************************.....((((((((.(((.................))).))))))))...............************************************************************************************************ 		Read size # Mismatch Hit Count Total Norm Total M058
embryo
 M044
female body
 V106
head
 V055
head
........................................................................................................................................................................................................................TTGCAGACTTACCACCAGAAAAG............ 23 1 1 1.00 1 1 0 0 0
................................................................................................................................................................................................................................TTACCACCAGAAAAGCTCAAG...... 21 0 1 1.00 1 0 1 0 0
...........................................................................................................................................................................................................TCCCAAGTCCAAAGTGCAGA............................ 20 0 1 1.00 1 1 0 0 0
.........................GGACAGACGGACAGACGGACA............................................................................................................................................................................................................. 21 0 20 0.65 13 0 0 13 0
.................................................................................................................................CACTTTTGACCAAAATTATAATACCC................................................................................................ 26 0 20 0.60 12 12 0 0 0
......................................GACGGACATGCTTATATCGACTCAGG........................................................................................................................................................................................... 26 0 20 0.35 7 7 0 0 0
..............................................................................................TATAGGGTCGGAGATGTCTCC........................................................................................................................................ 21 0 20 0.35 7 0 0 0 7
......................................................................................................................................................................................................................TATTGCAGACTTACCACCA.................. 19 2 3 0.33 1 1 0 0 0
...............................................................................................................................................................................................................AAGACAAAAGTGCAGACTTTCC...................... 22 3 3 0.33 1 0 0 0 1
.....................................................................................................................................................................................................AAAGGTTCCCAGGTCCAAA................................... 19 2 4 0.25 1 0 1 0 0
.........GGACAGACGGACCGACGGACA............................................................................................................................................................................................................................. 21 0 20 0.15 3 0 0 3 0
......GACGGACAGACGGACCGACGGAC.............................................................................................................................................................................................................................. 23 0 20 0.10 2 2 0 0 0
..................................................TATATCGACTCAGGAGGT....................................................................................................................................................................................... 18 0 20 0.05 1 0 1 0 0
............................................CATGCTTATATCGACTCAGGAGGTG...................................................................................................................................................................................... 25 0 20 0.05 1 0 0 1 0
..............................................TGCTTATATCGACTCAGGAGGTG...................................................................................................................................................................................... 23 0 20 0.05 1 0 1 0 0
.AGACAGACGGACAGACGGACCGACTT................................................................................................................................................................................................................................ 26 2 20 0.05 1 0 1 0 0

Anti-sense strand reads

GTCTGTCTGCCTGTCTGCCTGGCTGCCTGTCTGCCTGTCTGCCTGTACGAATATAGCTGAGTCCTCCACTAGGACTAGTTCTTATATATATGAAATATCCCAGCCTCTACAGAGGAAGTGACGCAACGTGTGAAAACTGGTTTTAATATTATGGGAGACGTTCCCATATTTTTCCTACTTTGAATATTAGATGATAATGTCCAAGGGTTCAGGTTTCACGTCTGAATGGTGGTCTTTTCGAGTTCTATAAG
************************************************************************************************.....((((((((.(((.................))).))))))))...............********************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M058
embryo
 M044
female body
 V105
male body		 V039
embryo
 V055
head
.............................................................................................................CAGAGGAAGTGACGCAACGTGTGAA..................................................................................................................... 25 0 20 7.60 152 152 0 0 0 0
..........................................................................................................................GCAACGTGTGAAAACTGGTTTTAATAT...................................................................................................... 27 0 20 2.00 40 0 0 40 0 0
..............................CTGCCTGTCTGCCTGTACGAATATAGCT................................................................................................................................................................................................. 28 0 20 0.90 18 18 0 0 0 0
..........................................................................................................CTACAGAGGAAGTGACGCAACGTG......................................................................................................................... 24 0 20 0.90 18 18 0 0 0 0
............................................................................................................ACAGAGGAAGTGACGCAACGTGTGA...................................................................................................................... 25 0 20 0.75 15 0 15 0 0 0
....................................................................................................................AGTGACGCAACGTGTGAAAA................................................................................................................... 20 0 20 0.60 12 0 12 0 0 0
...........................TGTCTGCCTGTCTGCCTGTACGAATAT..................................................................................................................................................................................................... 27 0 20 0.35 7 7 0 0 0 0
.................................CCTGTCTGCCTGTACGAATATAGCT................................................................................................................................................................................................. 25 0 20 0.35 7 7 0 0 0 0
......................................CTGCCTGTACGAATATAGCTGAGTCC........................................................................................................................................................................................... 26 0 20 0.25 5 0 5 0 0 0
....................................GTCTGCCTGTACGAATATAGC.................................................................................................................................................................................................. 21 0 20 0.20 4 0 2 2 0 0
...........................................................................................................TACAGAGGAAGTGACGCAACGT.......................................................................................................................... 22 0 20 0.20 4 0 4 0 0 0
.............................................................................................................CAGAGGAAGTGACGCAACGTGTGA...................................................................................................................... 24 0 20 0.20 4 0 4 0 0 0
...........................................................................................................................................................................................................................GTCTGAATGGTGGTGGTTTA............ 20 3 8 0.13 1 0 0 1 0 0
GTCTGTCTGCCTGTCTGCCTGGCTGCCT............................................................................................................................................................................................................................... 28 0 20 0.10 2 0 2 0 0 0
............GTCTGCCTGGCTGCCTGTCTG.......................................................................................................................................................................................................................... 21 0 20 0.10 2 0 2 0 0 0
..............................................................................................................AGAGGAAGTGACGCAACGTGT........................................................................................................................ 21 0 20 0.10 2 0 0 0 0 2
.................................................................CCACTAGGACTAGTTCTTATATATATG............................................................................................................................................................... 27 0 20 0.10 2 0 2 0 0 0
.......TGCCTGTCTGCCTGGCTGCCTGTCTGCC........................................................................................................................................................................................................................ 28 0 20 0.10 2 0 1 1 0 0
..................CTGGCTGCCTGTCTGCCCGTCTGCCT............................................................................................................................................................................................................... 26 1 20 0.05 1 0 1 0 0 0
..............................................................CCTCCACTAGGACTAGTTCTTAT...................................................................................................................................................................... 23 0 20 0.05 1 0 0 0 1 0
.............TCTGCCTGGCTGCCTGTCTGC......................................................................................................................................................................................................................... 21 0 20 0.05 1 0 0 1 0 0
.............................................................................................................................ACGTGTGAAAACTGGTTTTAATAT...................................................................................................... 24 0 20 0.05 1 0 1 0 0 0
.........................................CCTGTACGAATATAGCTGAGTCCTC......................................................................................................................................................................................... 25 0 20 0.05 1 1 0 0 0 0
..............................................................................................................AGAGGAAGTGACGCAACGTGTGA...................................................................................................................... 23 0 20 0.05 1 0 0 0 1 0
..........................................CTGTACGAATATAGCTGAGTCCTCCA....................................................................................................................................................................................... 26 0 20 0.05 1 0 1 0 0 0
..................CTGGCTGCCTGTCTGCCTGTCTGCC................................................................................................................................................................................................................ 25 0 20 0.05 1 1 0 0 0 0
.................................CCTGTCTGCCTGTACGAATATAGCTGAGT............................................................................................................................................................................................. 29 0 20 0.05 1 1 0 0 0 0
............................................................................................................................AACGTGTGAAAACTGGTTTT........................................................................................................... 20 0 20 0.05 1 0 0 0 1 0
...................................TGTCTGCCTGTACGAATATAGCTGAG.............................................................................................................................................................................................. 26 0 20 0.05 1 0 1 0 0 0
.............................TCTGCCTGTCTGCCTGTACGAA........................................................................................................................................................................................................ 22 0 20 0.05 1 0 0 1 0 0
....................GGCTGCCTGTCTGCCTGTCTG.................................................................................................................................................................................................................. 21 0 20 0.05 1 0 0 1 0 0
....................GGCTGCCTGTCTGCCTGTCTGCCTGTA............................................................................................................................................................................................................ 27 0 20 0.05 1 0 1 0 0 0
...................................TGTCTGCCTGTACGAATATAGC.................................................................................................................................................................................................. 22 0 20 0.05 1 0 0 1 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droAna3 scaffold_13266:4888396-4888646 - dan_1787 CAGACAGACGGACAGACGGACCGACG----------------GACAGACGGACAGACGGACATGCTTATATCGACTCAGGAGGTGATCCTGATCAAGA----ATATATATACTTTA-TAGGGTCGGAGATGTCTCCTTCACTGCGTTGCACACT-------TTTGACCAAAATTATAATACCCT-------------CTGCA-----AGGGTATAAAAAGG---------A-TGAAAC---------------TT------------------------------------------------------------------------ATAATCTACTA-------------------TTACAGG-----TTCCCAAGTCCAAAGTGCAGA-----CTTA------C---------------------CACCAGAA---------------------------------------------AAGCTC----------------AAGATATTC
droBip1 scf7180000394735:238-495 + CAGACAGACGGACAGACGGACAGACG----------------GACAGACGGACAGACGGACATGCTCATATCAACTCAGGAGGTGATCCTGATCAAGA----ATATATATACTTTA-TAGGGTCTGAGATGTCTCCTTCACTGCGTTGCACACT-------TTTGACCAAAATTATAATACCCT-------------CTGCA-----AGGGTATAAAAATG---------GACG-AAA---------------AA--------------------------------------------T-------------------------CTAAAA--------AATATTTTG---------TCTCAGG-----ATTTCGAT-------------------GCA------G---------------------AATGGTGG---------------------------------------------CGAATCGATCCAGAAATCGTTTAAAGTATTC
droKik1 scf7180000302468:425774-426012 - CGGACAGACGGA----CGGACGGACG----------------GACAGACGGACAGACGGACATGGCTAGATCGACTCGGCTGTTGATGCTGATCAAGA----ATATATATACTTTA-TAGGGTCGGAAAGGTTTCCTTCACTGCGTTGCAAACT-------TCTGACTGAAATTATAATACCC---------------TGCA-----AGGGTATAAAAATC---------A-GA--------------------------T-T--------------------------------------------------------------TTATAATACAAAATAATATT------------------------TTT-----------------------CTAA------GTCAAGGAATCATTTCCGACCC----C-A-----------------------------------------------TAACC----------------CATATATAT
droFic1 scf7180000453838:430178-430441 - CAGACAGACGGACAGACGGACAGACGGACCGACGGACAGACGGACAGACGGACAGACGTACATACCTATTTCGATTCAGATGGTGATGCTGATCAAGA----ATATATATACTTTA-TGGGGTCTAAGGTGTCTCCTTCAATGCGTTGCAAACT-------TCTGACTGAAATTATAATACCCTTTT-GC------TCTGCA-----AGGGTATAATTAGA---------A-TCAAGA--------------------------------------------------------------CAAT----------------------------------------T---TG-------------------TTGTAGTTAATTA-ATGC----CTA------------------------------GCG----C-A-----------------------CA-CATAC-------CTATAAAA--TTTT----------------GGGTGATTC
droEle1 scf7180000491249:2783855-2784116 + CAGACGGACGGACAGACGGACAGACGGACA------------GACGGACGGACAGACGGGCATGGCTAGATCGACTCTACTAGTGATGCTGATCAAGAATATATGTATATACTTTA-TAGGGTCGGAGATGTCTCCTTCACTGCGTTGCAAACT-------TCTGACTGAAATTATAATACCCT-------------CTGCA-----AGGGTATAAAAAAT---------T-ATAATACT-------------CAAA--------------------------TACACTTA--TATGCA-AT---------------T-------TCTTAA--------AATA----------------------------------TTTAAATTGTAGC-----TTTA-----AA------------------------TAAAA---------------------------------------------AAACTA----------------AATTTCTTC
droRho1 scf7180000768095:1191-1429 + CAGACAGACGGACAGACGGACAGACG----------------GACAGACGGACAGACGGACATGGCTATATCAACTCAGGAGGTGATCCTGATCAAGA----ATATATATACTTTA-TAGGGTCGGAGATGTCTCCTTCACTGCGTTGCACACT-------TTTGACCAAAATTATAATACCCT-------------CTGCA-----AGGGTATAAAAAGA---------A-ACAAAA---------------TT-----------------------------------------------------GAT----------TACA---------------------------------TTTTGATAAAC-----AA-----AGCCATAA------TTTA-----AA----------------------GCAAAAA---------------------------------------------AAGCAC----------------G-ATTTGTT
droBia1 scf7180000301276:16779-17026 - -------ACGGACAGACAGACGGACA----------------GACGGACGGACAGACGGGCATGGCTAGATCGACTCGTCTAGTGACGCTGATCAAGA----ATATATATGCTTTA-TGGGGTCGCAAACGTTTCCTTCACTGCGTTGCAAACT-------TCTATCTGAAATCATTATACCCT-------------CTGCA-----AGGGTATAAAAATA---------A-TAACAA---------------TT------------------------------------------------------AT----------CA--------------A-------------------TTTTAAG-----TTTGCAAGGACAG--------------------------------------------------CGGCGGTGCAGATTCACAATGCTTACAG-TGA----------------AAATAG----------------AAAATTGTC
droTak1 scf7180000415378:488273-488508 + CGGACAGACGGTCAGACGGACAGACG----------------GACAGACGGACAGACGGACATGGCTATATCGACTCCCCTATTGATCCTGATCAAGA----ATATATATACTTTA-TGGGGTCGGAAACGTCTCCTTCACTGCGTTACAAACT-------TCTGACCAAAATTATAATACCCT-------------CTGCA-----AGGGTATAAAAACA---------A-AAAAAA---------------TAAT-----------------------------------A--------------------------------------------------TT---TG-------------------CTGCAAAGAATTAAATACAAT--TGTATTA------C---------------------CAGAAGAA---------------------------------------------AA-----------------------AATATT
droEug1 scf7180000408987:103791-104035 + CGGACGGACGGACGGACGGACGGACG----------------GACGGACGGACAGACGGACATGGCTCAATCGACTTCGCTATTGATCCTGATCAAGA----ATATATATACTTTA-TAGGGTCGCAAAAGCTTCCTTCTATCTGTTACATACT-------TTTCAACGAATCTAGTATACCCTTTT-AC------TCTACGAGTAACGGGTATAAACATA---------A-AA--------------------------T-T----------------------------------------ATATTAAT----------TATA---------------------------------TT--------------------------------------------------------------------------------------AAAAAAAATAAAAC-TTAAAAAAAAA--------AATGTT----------------AAGCTATTG
dm3 chr3L:21725163-21725350 - ----------------------GACG----------------TTCATACGGACAGACGGGCATGGCCAGATCGACTCGGCTATTGATCCTGATCATAT----ATGTATATACTTTA-TATGGTCGGAAAAGTTTCCT-------GTTACATAAT-------TTTCAACACATCT------------T-AC------TCTACGAGTAAGGAGTATGAATACT---------A-TA--------------------------T-T--------------------------------------------------------------TTTTAAC-----------------------------CCG-----ATTTTC--------------A-----CTTA------C---------------------CATGATAA---------------------------------------------AAACTC----------------A-------A
droSim2 x:20771195-20771422 + ------------------------------------------GACATTCATACAGACGGACAGGGCCAGATCGACTCTGCTATTGATCCTGATCAGGA----ATATA--TAGTTTA-TATGGTCGGAATAGCTTCCTTCTGCCTTTTACATACT-------TTTCAACGAATCTAGTGTACTCATTC-AC------TCTATGAGTAACGGGTATAATGAAC----------------C--------------CCAGA-----------------------------------TTCAATC-CGTTTACAAATCGTAA------------------------------------------------------------GTTAAAAATAT----TTAACTTA-----------------------------------------------------------------A-------CTAAATGA--GTTC----------------GTGACATTG
droSec2 scaffold_11:1866469-1866664 - A---------------------------------------------GAAAGACAGACGGACATGCTCAGATCGACTCAGCTAGTAATCCTAATCAAGA----ATATACATAAACTAATAGGGTCGGAAACGCAA---TCCACCTGTTACATACT-------TTTCAACGAATCTAGTAAGCGT-TTT-GC------TCTACGAGTAAGATGTATTAAGCCT---------A-AGAAAT--------------TTATT-----------------------------------TTCGGC----------------------------------------------------------------------------AAGTCC-AAGTGCAG-------TTA------A---------------------------------------------------------------------------------------------------AACCAG
droYak3 v2_chrUn_1899:5338-5592 + CGGACAGACAGACAGACGGACAGACA----------------GACGGACGGACAGACGGACATGGCCAGATCGACTCAACTATTGATCCTGATCAAGA----ATATAAATACTTTA-TATGGTCGGAAACGCTTTATTCTGCCTGTTACATACT-------TTTCAACGAATCTATTATACCCTTTT-AC------TCTACGAGTAACGGGTATAAAGATACTGTAAT--G-AAATGC---------------CAGC-----------------------------------A---------CCGACAAATCACAAGTCCCTACC---------------------------------TCCCAACATAC-----------------------------------------------------------------A---------------------------------------------AAGATT----------------AACTCCTTT
droEre2 scaffold_4845:2374596-2374847 + CGGACAGATGGA--------CGAACA----------------GACGGACGGACAGACAGACATGACCAGATCGACTCGGCTATTGATTATGATCAAGA----ATATATATACTTTA-TATAGTCGGAAATGCTTCATTCTACCTGTTACA-----------------CGAATCTAGTATACCCTTTT-AC------TCTACAAGTAACGGGTATAACAAAA---------T-AGAATG---------------CT--ATAG-TCGAGTTCCCCGACTATCAGATACTCTTTACTCAGC----------------------------------------------------------------------------TAGTAT-AAGTGC----------TA-----AC-------------------------GAGA---------------------------------------------AATTTC----------------AAAATTTTC
dp5 Unknown_singleton_3996:1320-1596 + ------GACGGACAGACGGACGGACG----------------GACAGACGGACAGACAGACAGGGCTCAATCGACTCGGCTATTGATGCTGATCAAGA----ATATATATACTTTA-TGGGGTCGGAAACGATTCCTTCTGGACGTTACACACATCCACTTTTACCACAAATCTTATATACCCCAAT-ACTCAT----TTTGAGTATCGGGTATAAAAAGA---------G-CGAACACCGAGGTAAGTGGAGTGTCA-----------------------------------TATACA-GA---------------CTCTTGCA---------------------------------CTTCAAAGTAC------------------AAAGTTACTTTA-----TC------------------------GGTAA---------------------------------------------AAACTC----------------GTGATTATA
droPer2 scaffold_43:421536-421789 - ------GACGGACAGACGGACAGACG----------------GACGGACGGACAGACAGACAGGGCTCAATCGACTCGGCTATTGATGCTGATCAAGA----ATATATATACTTTA-TAGGGTCGGAAACGATTCCTTCTGGACGTTACACACATCCACTTTTACCACAAATCTAATATACCCCAAT-ACTCAT----TTTGAGTATCGGGTATAAAAATG---------A-AAA---------------------------T--------------------------------------------------------------TTCAAAT-----------TT---TTTTTCAAATTTCAAA-----TTTCCAA------A--GTAGC-----CTTATATTCAG---------------------------CC-------------------------------------------------------------------AAAAGATAT
droWil2 scf2_1100000007057:265-512 - CAGACGGACGGACGGACGGACGGACG----------------GACGGACGGACGGACGGACATGGCTATTTCAACTCGTCTCGTCGTGCTGATCAAGA----ATATATATACTTTA-TATGGTCGGAAATGCTTCCTTCTATGCGTTGCACACT-------TCTGACCAAAATTAATATACCCTTTT-----------TGCA-----AGGGTATAAAAACGTTTTATCTAA-AAAGGC---------------TAAT-----------------------------------A---------TTGCG------------------------------------------------------------------AAAGAACGGCCTACAAT-----CTTA------G---------------------CATAGGAA---------------------------------------------AGAACG----------------AAGATATTG
droVir3 scaffold_12941:454609-454836 + CAGACAGACGGA--------CAGACG----------------GATAGACGGACAGACGGACATGCCTATATCGACTCGGCTGTTGATGCTGATTAAGA----ATATATATACTTTA-TGGGGTCGGAGATGTCTCCTTCTATGCGTTACACATT-------TCACGACAAAATTATAATACCCT-------------CTGCA-----AGGATATAAAAAGC---------G-TAAC-C-----------AGCCTGTCATCCTTCCAGTCCCTTCAATACAGGG---------------------------------------------------------------------------------------------------------------------------------TACCATTTCTGCCCC----AAAA---------------------------------------------A-----------------------------A
droMoj3 scaffold_6680:19903197-19903455 - CGGACGGACGGACGGACGGACGGACG----------------GACGGACGGACAGACGGACAGGGCTATATCGACTCAGCTCGTCACGCTGATCAAGA----ATATATATACTTTG-TGGGGTCTGCCACGCCTCCTTCTGCCCGTTACATACT-------TTTTCACAAAACCATTATACCCTGATTTCCCATTTTCAATGGGTTCAGGGTATAATAATA---------A-GAAA-T--------------GTATT-----------------------------------ATCAACA-CATTAATCAAACATC------------------------------------------------------------------AGGTGTAAA-----TTTA-----AC-------------------------AG-G---------------------------------------------CAACTA----------------AAGTTCTTA
droGri2 scaffold_14624:817604-817820 + -----------------------ACG----------------GACAGACTGCCAGACGAACATGGGCACATCGACTCGGCTAGCGATGCTGATAAAGA----ATATATATATTTGAGGGGGGTCGGATATGTTGCCTACAATGCATTACAAACT-------CGAAATCAAAATGATAATATCAT-------------CTACA-----AGGACATTAAAATG---------TATA-AAA---------------GT--------------------------------------------C-------------------------TTGTGG--------TATATTTAG---------TCGAAGC-----TTTATAACCCTAAAGAGCAGG-----AGTA------A---------------------------------------------------------------------------------------------------GAAAAG

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droAna3
CAGACAGACGGACAGACGGACCGACG----------------GACAGACGGACAGACGGACATGCTTATATCGACTCAGGAGGTGATCCTGATCAAGA----ATATATATACTTTA-TAGGGTCGGAGATGTCTCCTTCACTGCGTTGCACACT-------TTTGACCAAAATTATAATACCCT-------------CTGCA-----AGGGTATAAAAAGG---------A-TGAAAC---------------TT------------------------------------------------------------------------ATAATCTACTA-------------------TTACAGG-----TTCCCAAGTCCAAAGTGCAGA-----CTTA------C---------------------CACCAGAA---------------------------------------------AAGCTC----------------AAGATATTCSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
............................................................................................................................................................................................................................................................................................................................................................................................................TTA------C---------------------CACCAGAA---------------------------------------------AAGCTC----------------AAG......2111.001100000
..................................................................................................................................................................................................................................................................................................................................................................................TCCCAAGTCCAAAGTGCAGA-----....................................................................................................................2011.001010000
.........................G----------------GACAGACGGACAGACGGACA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.65130000013
......................................................................................................................................................CACT-------TTTGACCAAAATTATAATACCC........................................................................................................................................................................................................................................................................................................................................26200.60120120000
......................................................GACGGACATGCTTATATCGACTCAGG...............................................................................................................................................................................................................................................................................................................................................................................................................................................26200.357070000
..................................................................................................................TA-TAGGGTCGGAGATGTCTCC.......................................................................................................................................................................................................................................................................................................................................................................................21200.357000700
.........GGACAGACGGACCGACG----------------GACA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.153000003
......GACGGACAGACGGACCGACG----------------GAC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.102020000
..................................................................TATATCGACTCAGGAGGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................18200.051100000
............................................................CATGCTTATATCGACTCAGGAGGTG..........................................................................................................................................................................................................................................................................................................................................................................................................................................25200.051000001
..............................................................TGCTTATATCGACTCAGGAGGTG..........................................................................................................................................................................................................................................................................................................................................................................................................................................23200.051100000
.AGACAGACGGACAGACGGACCGACT----------------T....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.051100000
droBip1
CAGACAGACGGACAGACGGACAGACG----------------GACAGACGGACAGACGGACATGCTCATATCAACTCAGGAGGTGATCCTGATCAAGA----ATATATATACTTTA-TAGGGTCTGAGATGTCTCCTTCACTGCGTTGCACACT-------TTTGACCAAAATTATAATACCCT-------------CTGCA-----AGGGTATAAAAATG---------GACG-AAA---------------AA--------------------------------------------T-------------------------CTAAAA--------AATATTTTG---------TCTCAGG-----ATTTCGAT-------------------GCA------G---------------------AATGGTGG---------------------------------------------CGAATCGATCCAGAAATCGTTTAAAGTATTCSizeHit CountTotal NormTotal
No Reads
droKik1
CGGACAGACGGA----CGGACGGACG----------------GACAGACGGACAGACGGACATGGCTAGATCGACTCGGCTGTTGATGCTGATCAAGA----ATATATATACTTTA-TAGGGTCGGAAAGGTTTCCTTCACTGCGTTGCAAACT-------TCTGACTGAAATTATAATACCC---------------TGCA-----AGGGTATAAAAATC---------A-GA--------------------------T-T--------------------------------------------------------------TTATAATACAAAATAATATT------------------------TTT-----------------------CTAA------GTCAAGGAATCATTTCCGACCC----C-A-----------------------------------------------TAACC----------------CATATATATSizeHit CountTotal NormTotal
No Reads
droFic1
CAGACAGACGGACAGACGGACAGACGGACCGACGGACAGACGGACAGACGGACAGACGTACATACCTATTTCGATTCAGATGGTGATGCTGATCAAGA----ATATATATACTTTA-TGGGGTCTAAGGTGTCTCCTTCAATGCGTTGCAAACT-------TCTGACTGAAATTATAATACCCTTTT-GC------TCTGCA-----AGGGTATAATTAGA---------A-TCAAGA--------------------------------------------------------------CAAT----------------------------------------T---TG-------------------TTGTAGTTAATTA-ATGC----CTA------------------------------GCG----C-A-----------------------CA-CATAC-------CTATAAAA--TTTT----------------GGGTGATTCSizeHit CountTotal NormTotal
No Reads
droEle1
CAGACGGACGGACAGACGGACAGACGGACA------------GACGGACGGACAGACGGGCATGGCTAGATCGACTCTACTAGTGATGCTGATCAAGAATATATGTATATACTTTA-TAGGGTCGGAGATGTCTCCTTCACTGCGTTGCAAACT-------TCTGACTGAAATTATAATACCCT-------------CTGCA-----AGGGTATAAAAAAT---------T-ATAATACT-------------CAAA--------------------------TACACTTA--TATGCA-AT---------------T-------TCTTAA--------AATA----------------------------------TTTAAATTGTAGC-----TTTA-----AA------------------------TAAAA---------------------------------------------AAACTA----------------AATTTCTTCSizeHit CountTotal NormTotal
No Reads
droRho1
CAGACAGACGGACAGACGGACAGACG----------------GACAGACGGACAGACGGACATGGCTATATCAACTCAGGAGGTGATCCTGATCAAGA----ATATATATACTTTA-TAGGGTCGGAGATGTCTCCTTCACTGCGTTGCACACT-------TTTGACCAAAATTATAATACCCT-------------CTGCA-----AGGGTATAAAAAGA---------A-ACAAAA---------------TT-----------------------------------------------------GAT----------TACA---------------------------------TTTTGATAAAC-----AA-----AGCCATAA------TTTA-----AA----------------------GCAAAAA---------------------------------------------AAGCAC----------------G-ATTTGTTSizeHit CountTotal NormTotal
No Reads
droBia1
-------ACGGACAGACAGACGGACA----------------GACGGACGGACAGACGGGCATGGCTAGATCGACTCGTCTAGTGACGCTGATCAAGA----ATATATATGCTTTA-TGGGGTCGCAAACGTTTCCTTCACTGCGTTGCAAACT-------TCTATCTGAAATCATTATACCCT-------------CTGCA-----AGGGTATAAAAATA---------A-TAACAA---------------TT------------------------------------------------------AT----------CA--------------A-------------------TTTTAAG-----TTTGCAAGGACAG--------------------------------------------------CGGCGGTGCAGATTCACAATGCTTACAG-TGA----------------AAATAG----------------AAAATTGTCSizeHit CountTotal NormTotal
No Reads
droTak1
CGGACAGACGGTCAGACGGACAGACG----------------GACAGACGGACAGACGGACATGGCTATATCGACTCCCCTATTGATCCTGATCAAGA----ATATATATACTTTA-TGGGGTCGGAAACGTCTCCTTCACTGCGTTACAAACT-------TCTGACCAAAATTATAATACCCT-------------CTGCA-----AGGGTATAAAAACA---------A-AAAAAA---------------TAAT-----------------------------------A--------------------------------------------------TT---TG-------------------CTGCAAAGAATTAAATACAAT--TGTATTA------C---------------------CAGAAGAA---------------------------------------------AA-----------------------AATATTSizeHit CountTotal NormTotal
No Reads
droEug1
CGGACGGACGGACGGACGGACGGACG----------------GACGGACGGACAGACGGACATGGCTCAATCGACTTCGCTATTGATCCTGATCAAGA----ATATATATACTTTA-TAGGGTCGCAAAAGCTTCCTTCTATCTGTTACATACT-------TTTCAACGAATCTAGTATACCCTTTT-AC------TCTACGAGTAACGGGTATAAACATA---------A-AA--------------------------T-T----------------------------------------ATATTAAT----------TATA---------------------------------TT--------------------------------------------------------------------------------------AAAAAAAATAAAAC-TTAAAAAAAAA--------AATGTT----------------AAGCTATTGSizeHit CountTotal NormTotal
No Reads
dm3
----------------------GACG----------------TTCATACGGACAGACGGGCATGGCCAGATCGACTCGGCTATTGATCCTGATCATAT----ATGTATATACTTTA-TATGGTCGGAAAAGTTTCCT-------GTTACATAAT-------TTTCAACACATCT------------T-AC------TCTACGAGTAAGGAGTATGAATACT---------A-TA--------------------------T-T--------------------------------------------------------------TTTTAAC-----------------------------CCG-----ATTTTC--------------A-----CTTA------C---------------------CATGATAA---------------------------------------------AAACTC----------------A-------ASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
...........................................TCATACGGACAGACGGGCATGGCCAGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................2727.50150000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000103000000000101041000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000
............................................CATACGGACAGACGGGCATGGCCAGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................2627.50150000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000001000000040000000000000001120000000000000000000000000000000000000000000000000000000000000000000011000000100000000000000000002000000
..........................................TTCATACGGACAGACGGGCATGGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................2463.83230000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000102100000000002100000000000000000000000000000000000002000000001001000200000000000000210000000000000000000000000000000000000000000000000000000000000000000000000000111000000000000000101000000
..............................................TACGGACAGACGGGCATGGCCAGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................2423.5070000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000300000100000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
..........................................TTCATACGGACAGACGGGCATGG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................2362.83170000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101000200000000000011000000000000000000000000000000000000000200000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000101000000220000000000000001100000000
..........................................TTCATACGGACAGACGGGCATGGCCAGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................2822.5050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100100000000000000000000000000000000000000000000000000000000001000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
...........................................TCATACGGACAGACGGGCATGGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................2372.29160000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000100000000000100000000000000000000000000000000000000000000040000000000000000100001001010000000000000000000000000000000000000000000000000000000000001000000000000000111000000000000000100000000
.......................................................................CGACTCGGCTATTGATCCTGA...................................................................................................................................................................................................................................................................................................................................................................................................................................21202.254500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000440000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
..............................................TACGGACAGACGGGCATGGCCAGATC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................2622.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000010000100000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
......................GACG----------------TTCATACGGACAGACGGGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................2342.0080000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
..........................................TTCATACGGACAGACGGGCA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................2082.00160000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000046300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000100000000000000000000000000
...........................................TCATACGGACAGACGGGCATGG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................2271.57110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000100000001110000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000100100000
....................................................CAGACGGGCATGGCCAGATCGAC....................................................................................................................................................................................................................................................................................................................................................................................................................................................2331.3340000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................TCATACGGACAGACGGGCATGGCCA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................2531.3340000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................TACGGACAGACGGGCATGGCCA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................2231.3340000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000100000
............................................CATACGGACAGACGGGCA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................18101.30130000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000001107200000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
..........................................................................................................ATATACTTTA-TATGGTCGGAAAAG............................................................................................................................................................................................................................................................................................................................................................................................2451.2060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000330000000000000000000000000
.........................G----------------TTCATACGGACAGACGGGCATGGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................2561.1770000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000006000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................CATACGGACAGACGGGCATGGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................2271.1480000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000100010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000010000000000000000020000000
............................................CATACGGACAGACGGGCATGG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................2171.1480000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000100000000000000000000000000000000000000000000000000000000000000200110000000000000000000000000000000000000000000000000000000010000000000000000000000000100000000000000000000000000
...........................................TCATACGGACAGACGGGCA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................19101.10110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000001215100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................TTA-TATGGTCGGAAAAGTTTCCT-------GTTAC..........................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................TTCATACGGACAGACGGGCATGGCCA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................2631.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000100000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................TAAC-----------------------------CCG-----ATTTTC--------------A-----CTTA------C---------------------CATGATAA---------------------------------------------A..............................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................C-----------------------------CCG-----ATTTTC--------------A-----CTTA------C---------------------CATGATAA---------------------------------------------AAA............................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................TCATACGGACAGACGGGCATGGCCAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................2621.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................TAAGGAGTATGAATACT---------A-TA--------------------------T-T--------------------------------------------------------------TTTTA.....................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................TTCATACGGACAGACGGGCAT................................................................................................................................................................................................................................................................................................................................................................................................................................................................2181.0080000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001002100010000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000001000000
.................................................................................................T----ATGTATATACTTTA-TATGGTCGGA................................................................................................................................................................................................................................................................................................................................................................................................2521.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................ATAAT-------TTTCAACACATCA------------.....................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................TTCATACGGACAGACGGGCATGGCC............................................................................................................................................................................................................................................................................................................................................................................................................................................................2531.0030000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................ATACGGACAGACGGGCATGG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................2070.7150000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................TTCATACGGACAGACGGGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................1980.6350000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000010000000000000000000000000
.........................................................................................................TATATACTTTA-TATGGTCGGAAAAG............................................................................................................................................................................................................................................................................................................................................................................................2550.6030000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................TACTTTA-TATGGTCGGAAAA.............................................................................................................................................................................................................................................................................................................................................................................................2070.5740000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000
.............................................ATACGGACAGACGGGCATGGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................2170.5740000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000001000100000000000000010
..............................................TACGGACAGACGGGCATGGCCAGAT........................................................................................................................................................................................................................................................................................................................................................................................................................................................2520.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................CATACGGACAGACGGGCATGGCCAGAT........................................................................................................................................................................................................................................................................................................................................................................................................................................................2720.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................GACAGACGGGCATGGCCAGATCG......................................................................................................................................................................................................................................................................................................................................................................................................................................................2320.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
.........................G----------------TTCATACGGACAGACGGGCATGG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................2460.5030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000
........................CG----------------TTCATACGGACAGACGGGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................2140.5020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
....................................................CAGACGGGCATGGCCAGATCGACTC..................................................................................................................................................................................................................................................................................................................................................................................................................................................2520.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
.............................................ATACGGACAGACGGGCATGGCCAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................2420.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................T----ATGTATATACTTTA-TATGGTCGGAAA..............................................................................................................................................................................................................................................................................................................................................................................................2720.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................TACTTTA-TATGGTCGGAAAAG............................................................................................................................................................................................................................................................................................................................................................................................2170.4330000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001110000000000000000000000000000000000
............................................CATACGGACAGACGGGCAT................................................................................................................................................................................................................................................................................................................................................................................................................................................................19100.4040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002011000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................CCAGATCGACTCGGCTATTGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................21200.4080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000010006000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................TCATACGGACAGACGGGCATG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................2180.3830000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
....................................................CAGACGGGCATGGCCAGATCGACT...................................................................................................................................................................................................................................................................................................................................................................................................................................................2430.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................GACGGGCATGGCCAGATCGAC....................................................................................................................................................................................................................................................................................................................................................................................................................................................2130.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................CAGACGGGCATGGCCAGATC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................2030.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................CAGACGGGCATGGCCAGATCGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2230.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................TCATACGGACAGACGGGCATGGCC............................................................................................................................................................................................................................................................................................................................................................................................................................................................2430.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................TCATACGGACAGACGGGCATGGCCAC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................2630.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................GACGGGCATGGCCAGATCGACT...................................................................................................................................................................................................................................................................................................................................................................................................................................................2230.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
......................................................................TCGACTCGGCTATTGATCCTGA...................................................................................................................................................................................................................................................................................................................................................................................................................................22200.3060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000030000000000000000000000000
.........................G----------------TTCATACGGACAGACGGGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................2070.2920000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000100000000
.........................G----------------TTCATACGGACAGACGGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................1970.2920000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
......................................................................TCGACTCGGCTATTGATCCTG....................................................................................................................................................................................................................................................................................................................................................................................................................................21200.2550000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000
.......................ACG----------------TTCATACGGACAGACGGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................2140.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
..................................................................CAGATCGACTCGGCTATTGATC.......................................................................................................................................................................................................................................................................................................................................................................................................................................22200.2550000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................CG----------------TTCATACGGACAGACGGGCATG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................2440.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................TCATACGGACAGACGGGCATGGCCTTT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................2780.2520000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................AGATCGACTCGGCTATTGATC.......................................................................................................................................................................................................................................................................................................................................................................................................................................21200.2550000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000020000000000000000000000000000000000000000000000000000
............................................CATACGGACAGACGGGCATG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................2080.2520000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................TACGGACAGACGGGCATGG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................19140.2130000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000010000000000000001000000000
...........................................TCATACGGACAGACGGGCAT................................................................................................................................................................................................................................................................................................................................................................................................................................................................20100.2020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................TCATACGGACAGACGGGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................18100.2020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................TCGACTCGGCTATTGATCCT.....................................................................................................................................................................................................................................................................................................................................................................................................................................20200.2040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
......................................................................TCGACTCGGCTATTGATCCTGATCA................................................................................................................................................................................................................................................................................................................................................................................................................................25200.2040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................TTCATACGGACAGACGGGCATGGCCTT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................2760.1710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................TTCATACGGACAGACGGGCATGGCCAT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................2760.1710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................CCAGATCGACTCGGCTATTGAT........................................................................................................................................................................................................................................................................................................................................................................................................................................22200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
............................................................CATGGCCAGATCGACTCGGCT..............................................................................................................................................................................................................................................................................................................................................................................................................................................21200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................ATATACTTTA-TATGGTCGGAA...............................................................................................................................................................................................................................................................................................................................................................................................21200.1530000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000
..............................................................TGGCCAGATCGACTCGGCTATTGATC.......................................................................................................................................................................................................................................................................................................................................................................................................................................26200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010100100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................ATACTTTA-TATGGTCGGAAAA.............................................................................................................................................................................................................................................................................................................................................................................................2170.1410000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.........................G----------------TTCATACGGACAGACGGGCAT................................................................................................................................................................................................................................................................................................................................................................................................................................................................2270.1410000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................TACGGACAGACGGGCATGGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................20140.1420000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................TCATACGGACAGACGGGCATGGCG............................................................................................................................................................................................................................................................................................................................................................................................................................................................2470.1410000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................G----------------TTCATACGGACAGACGGGCA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................2170.1410000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................ATACTTTA-TATGGTCGGAAAAG............................................................................................................................................................................................................................................................................................................................................................................................2270.1410000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
..............................................TACGGACAGACGGGCATG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................18150.1320000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................TTCATACGGACAGACGGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................1880.1310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
..........................................TTCATACGGACAGACGGGCC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................2090.1110000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................TCATACGGACAGACGGGCATGGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................23100.1010000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................TCGGCTATTGATCCTGAT..................................................................................................................................................................................................................................................................................................................................................................................................................................18200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................CATGGCCAGATCGACTCGGCTA.............................................................................................................................................................................................................................................................................................................................................................................................................................................22200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
..................................................................CAGATCGACTCGGCTATTGAT........................................................................................................................................................................................................................................................................................................................................................................................................................................21200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................AGATCGACTCGGCTATTGAT........................................................................................................................................................................................................................................................................................................................................................................................................................................20200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000
................................................................GCCAGATCGACTCGGCTATTGATCCTG....................................................................................................................................................................................................................................................................................................................................................................................................................................27200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................CATGGCCAGATCGACTCGGCTATTGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................26200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................CCAGATCGACTCGGCTATTG..........................................................................................................................................................................................................................................................................................................................................................................................................................................20200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000
.....................................................................ATCGACTCGGCTATTGATCCTGATCA................................................................................................................................................................................................................................................................................................................................................................................................................................26200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................TGGCCAGATCGACTCGGCTATTGAT........................................................................................................................................................................................................................................................................................................................................................................................................................................25200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................TATACTTTA-TATGGTCGGAAAAA............................................................................................................................................................................................................................................................................................................................................................................................23110.0910000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
.................................................................................................................TTA-TATGGTCGGAAAAGTTTCCT-------TA.............................................................................................................................................................................................................................................................................................................................................................................25150.0710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000
..............................................TACGGACAGACGGGCATGGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................20170.0610000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................TACGGACAGACGGGCATGGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................20180.0610000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................GCCAGATCGACTCGGCTAT............................................................................................................................................................................................................................................................................................................................................................................................................................................19200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
................................................................GCCAGATCGACTCGGCTATTGATC.......................................................................................................................................................................................................................................................................................................................................................................................................................................24200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................GCCAGATCGACTCGGCTATTGATCCTGA...................................................................................................................................................................................................................................................................................................................................................................................................................................28200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................ATATACTTTA-TATGGTCGGAAA..............................................................................................................................................................................................................................................................................................................................................................................................22200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000
...............................................................GGCCAGATCGACTCGGCTATTGATC.......................................................................................................................................................................................................................................................................................................................................................................................................................................25200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................TCGGCTATTGATCCTGATCA................................................................................................................................................................................................................................................................................................................................................................................................................................20200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................GCCAGATCGACTCGGCTATTG..........................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
------------------------------------------GACATTCATACAGACGGACAGGGCCAGATCGACTCTGCTATTGATCCTGATCAGGA----ATATA--TAGTTTA-TATGGTCGGAATAGCTTCCTTCTGCCTTTTACATACT-------TTTCAACGAATCTAGTGTACTCATTC-AC------TCTATGAGTAACGGGTATAATGAAC----------------C--------------CCAGA-----------------------------------TTCAATC-CGTTTACAAATCGTAA------------------------------------------------------------GTTAAAAATAT----TTAACTTA-----------------------------------------------------------------A-------CTAAATGA--GTTC----------------GTGACATTGSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.................................................................................................................................................................TTTCAACGAATCTAGTGTACTCATT.....................................................................................................................................................................................................................................................................................................................................25111.001100200050400000000
....................................................................................................................................................................................................TCTATGAGTAACGGGTATAATGAAC----------------C--------------CCAGA-----------------------------------...........................................................................................................................................................................................................................3118.00800000080000000000
.............................................................................................................TAGTTTA-TATGGTCGGAATAGCTTCC.......................................................................................................................................................................................................................................................................................................................................................................................2616.00600000040200000000
......................................................................................................................................................................................................TATGAGTAACGGGTATAATGAAC----------------C--------------CCAGA-----------------------------------...........................................................................................................................................................................................................................2914.00400000020200000000
......................................................GACGGACAGGGCCAGATCGACTCTGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................2613.00300300000000000000
.............................................................................................................TAGTTTA-TATGGTCGGAATAGCT..........................................................................................................................................................................................................................................................................................................................................................................................2313.00300000020100000000
........................................................................................................................................................................................................TGAGTAACGGGTATAATGAAC----------------C--------------CCAGA-----------------------------------...........................................................................................................................................................................................................................2713.00300000010200000000
..................................................TACAGACGGACAGGGCCAGATCGACTC..................................................................................................................................................................................................................................................................................................................................................................................................................................................2713.00300300000000000000
..........................................GACATTCATACAGACGGACAGGGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.00200000000000020000
.......................................................................................................TATA--TAGTTTA-TATGGTCGGAATAGCT..........................................................................................................................................................................................................................................................................................................................................................................................2712.00200100010000000000
.............................................................................................................TAGTTTA-TATGGTCGGAATAGC...........................................................................................................................................................................................................................................................................................................................................................................................2212.00200000010100000000
.......................................................................................................TATA--TAGTTTA-TATGGTCGGAATAG............................................................................................................................................................................................................................................................................................................................................................................................2512.00200000000100010000
.........................................................................................................TA--TAGTTTA-TATGGTCGGAATAGCT..........................................................................................................................................................................................................................................................................................................................................................................................2512.00200200000000000000
....................................................................................................................................................................................................TCTATGAGTAACGGGTATAATGAA...................................................................................................................................................................................................................................................................................................2412.00200000010010000000
....................................................................GATCGACTCTGCTATTGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................1891.7816000016000000000000
....................................................CAGACGGACAGGGCCAGATCGACTC..................................................................................................................................................................................................................................................................................................................................................................................................................................................2521.50300300000000000000
..................................................................................................................TA-TATGGTCGGAATAGCTTCCTTC....................................................................................................................................................................................................................................................................................................................................................................................2411.00100000010000000000
..................................................TACAGACGGACAGGGCCAGATCGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000010000000000
................................................................................................................................................................................................................................................................................................................................................................................................TAT----TTAACTTA-----------------------------------------------------------------A-------CTAAATGA--GTTC----------------GT.......2611.00100010000000000000
.............................................................................................................TAGTTTA-TATGGTCGGAATAGCTT.........................................................................................................................................................................................................................................................................................................................................................................................2411.00100000000100000000
.........................................................................................................................................................................................................................................................................................................TC-CGTTTACAAATCGTAA------------------------------------------------------------GTTAAAAATA.............................................................................................................................2811.00100000000100000000
................................................................................................GA----ATATA--TAGTTTA-TATGGTCGGAA...............................................................................................................................................................................................................................................................................................................................................................................................2511.00100000000001000000
.............................................................AGGGCCAGATCGACTCTGCTATTGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000010000000000
.............................................................................................................TAGTTTA-TATGGTCGGAATAGCTTCCT......................................................................................................................................................................................................................................................................................................................................................................................2711.00100000010000000000
.............................................................................................................TAGTTTA-TATGGTCGGAATAGCTTC........................................................................................................................................................................................................................................................................................................................................................................................2511.00100000010000000000
.............................................................................................................TAGTTTA-TATGGTCGGAAT..............................................................................................................................................................................................................................................................................................................................................................................................1911.00100000010000000000
....................................................................................................................................................................................................................................................................................................TTCAATC-CGTTTACAAATCGTAA------------------------------------------------------------GTTAAAAA...............................................................................................................................3111.00100000000100000000
...........................................................................................................................................................................................................................AC----------------C--------------CCAGA-----------------------------------TTCAATC-CGTTTACAAA.........................................................................................................................................................................................................2511.00100000000100000000
......................................................................TCGACTCTGCTATTGATCCTGATCAGGA----A........................................................................................................................................................................................................................................................................................................................................................................................................................2921.00200000010100000000
.............................................................AGGGCCAGATCGACTCTGCTATTGATCC......................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000000100000000
..................................................TACAGACGGACAGGGCCAGATCGAC....................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000000100000000
....................................................................GATCGACTCTGCTATTGAT........................................................................................................................................................................................................................................................................................................................................................................................................................................1990.89800008000000000000
...........................................................................................................................................TGCCTTTTACATACT-------TTTCAACGAA....................................................................................................................................................................................................................................................................................................................................................2550.80400000010300000000
...........................................................................TCTGCTATTGATCCTGATCAG...............................................................................................................................................................................................................................................................................................................................................................................................................................2130.67200000001001000000
..................................................................................................................TA-TATGGTCGGAATAGCT..........................................................................................................................................................................................................................................................................................................................................................................................1820.50100000010000000000
...........................................................................TCTGCTATTGATCCTGATCAGGA----A........................................................................................................................................................................................................................................................................................................................................................................................................................2420.50100000000100000000
..................................................................................................................TA-TATGGTCGGAATAGC...........................................................................................................................................................................................................................................................................................................................................................................................1720.50100000000001000000
...................................................................................................................................................ACATACT-------TTTCAACGAATCTAGTGT............................................................................................................................................................................................................................................................................................................................................25100.40400000000103000000
...............................................................GGCCAGATCGACTCTGCTATTGATCCTGA...................................................................................................................................................................................................................................................................................................................................................................................................................................2930.33100000010000000000
.................................................................................ATTGATCCTGATCAGGA----ATATA--TA................................................................................................................................................................................................................................................................................................................................................................................................................2460.33200000000200000000
......................................................................TCGACTCTGCTATTGATCCTGATCAG...............................................................................................................................................................................................................................................................................................................................................................................................................................2630.33100000001000000000
....................................................................GATCGACTCTGCTATTGATCCTGA...................................................................................................................................................................................................................................................................................................................................................................................................................................2470.29200010000001000000
...................................................................................................................................................ACATACT-------TTTCAACGAATCTAGT..............................................................................................................................................................................................................................................................................................................................................23200.25500000030002000000
.....................................................................................................................................TCCTTCTGCCTTTTACATACT-------TTTCAAC.......................................................................................................................................................................................................................................................................................................................................................2840.25100000010000000000
...................................................ACAGACGGACAGGGCCAGATCGAC....................................................................................................................................................................................................................................................................................................................................................................................................................................................2440.25100100000000000000
.................................................................................ATTGATCCTGATCAGGA----AT.......................................................................................................................................................................................................................................................................................................................................................................................................................1990.22200000000002000000
.................................................................................ATTGATCCTGATCAGGA----A........................................................................................................................................................................................................................................................................................................................................................................................................................1890.22200000000002000000
.........................................................................................................................................TCTGCCTTTTACATACT-------TTTCAACGAA....................................................................................................................................................................................................................................................................................................................................................2750.20100000010000000000
........................................................................................................................................TTCTGCCTTTTACATACT-------TTTCAACGAA....................................................................................................................................................................................................................................................................................................................................................2850.20100000000100000000
....................................................................................................................................TTCCTTCTGCCTTTTACATACT-------..............................................................................................................................................................................................................................................................................................................................................................2260.17100000000100000000
................................................................................TATTGATCCTGATCAGGA----ATATA--TA................................................................................................................................................................................................................................................................................................................................................................................................................2560.17100000000100000000
................................................................GCCAGATCGACTCTGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................1660.17100000000001000000
....................................................................GATCGACTCTGCTATTGATCCTGAT..................................................................................................................................................................................................................................................................................................................................................................................................................................2560.17100000000001000000
......................................................................TCGACTCTGCTATTGATCCTGATC.................................................................................................................................................................................................................................................................................................................................................................................................................................2460.17100000000000010000
.....................................................AGACGGACAGGGCCAGATC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................1970.14110000000000000000
....................................................................................GATCCTGATCAGGA----AT.......................................................................................................................................................................................................................................................................................................................................................................................................................16170.12200000000002000000
........................................................CGGACAGGGCCAGATCGACTC..................................................................................................................................................................................................................................................................................................................................................................................................................................................2190.11110000000000000000
.................................................................................ATTGATCCTGATCAGGA----.........................................................................................................................................................................................................................................................................................................................................................................................................................17100.10100000000100000000
......................................................GACGGACAGGGCCAGATCGAC....................................................................................................................................................................................................................................................................................................................................................................................................................................................21110.09100000010000000000
..............................................................................GCTATTGATCCTGATCAG...............................................................................................................................................................................................................................................................................................................................................................................................................................18130.08110000000000000000
...............................................................................................................................................TTTTACATACT-------TTTCAACGAAT...................................................................................................................................................................................................................................................................................................................................................22140.07100000000010000000
.................................................................................................................................................................TTTCAACGAATCTAGTGTA...........................................................................................................................................................................................................................................................................................................................................19150.07100000000001000000
.................................................................................................................................................................TTTCAACGAATCTAGTGT............................................................................................................................................................................................................................................................................................................................................18150.07100000000001000000
....................................................................................................................................................................................................TCTATGAGTAACGGGTA..........................................................................................................................................................................................................................................................................................................17170.06100000000001000000
....................................................................................................................................................................................................TCTATGAGTAACGGG............................................................................................................................................................................................................................................................................................................15180.06100000000001000000
........................................................................................................................................................................................................TGAGTAACGGGTATA........................................................................................................................................................................................................................................................................................................15200.05100000000001000000
........................................................CGGACAGGGCCAGAT........................................................................................................................................................................................................................................................................................................................................................................................................................................................15200.05100000010000000000
droSec2
A---------------------------------------------GAAAGACAGACGGACATGCTCAGATCGACTCAGCTAGTAATCCTAATCAAGA----ATATACATAAACTAATAGGGTCGGAAACGCAA---TCCACCTGTTACATACT-------TTTCAACGAATCTAGTAAGCGT-TTT-GC------TCTACGAGTAAGATGTATTAAGCCT---------A-AGAAAT--------------TTATT-----------------------------------TTCGGC----------------------------------------------------------------------------AAGTCC-AAGTGCAG-------TTA------A---------------------------------------------------------------------------------------------------AACCAGSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
No Reads
droYak3
CGGACAGACAGACAGACGGACAGACA----------------GACGGACGGACAGACGGACATGGCCAGATCGACTCAACTATTGATCCTGATCAAGA----ATATAAATACTTTA-TATGGTCGGAAACGCTTTATTCTGCCTGTTACATACT-------TTTCAACGAATCTATTATACCCTTTT-AC------TCTACGAGTAACGGGTATAAAGATACTGTAAT--G-AAATGC---------------CAGC-----------------------------------A---------CCGACAAATCACAAGTCCCTACC---------------------------------TCCCAACATAC-----------------------------------------------------------------A---------------------------------------------AAGATT----------------AACTCCTTTSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.......................................................................................................................................................................................TTTT-AC------TCTACGAGTAACGGGTATA........................................................................................................................................................................................................................................................................................................25200.10200200000000
........................CA----------------GACGGACGGACAGACGGAC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.10220000000000
.........................................................................................................TAAATACTTTA-TATGGTCGG.................................................................................................................................................................................................................................................................................................................................................................................................20180.06101000000000
............................................................................................................................................................................................AC------TCTACGAGTAACGGGTATAAAGA....................................................................................................................................................................................................................................................................................................25200.05101000000000
................CGGACAGACA----------------GACGGACGGAC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05100100000000
...........................................ACGGACGGACAGACGGACATGGCCAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.05110000000000
..........................................................................................................................................................................................T-AC------TCTACGAGTAACGGGTATAAAGA....................................................................................................................................................................................................................................................................................................26200.05101000000000
.........................................................................................................................................................................AATCTATTATACCCTTTT-AC------T..........................................................................................................................................................................................................................................................................................................................21200.05101000000000
..............................................GACGGACAGACGGACATGGCCAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.05101000000000
............................................................................................................ATACTTTA-TATGGTCGGAAACGCT..........................................................................................................................................................................................................................................................................................................................................................................................24200.05100000010000
..........................................................................................................................................................................................T-AC------TCTACGAGTAACGGGTAT.........................................................................................................................................................................................................................................................................................................21200.05101000000000
......................................................................................................................................................TACT-------TTTCAACGAATCTATTATACCC........................................................................................................................................................................................................................................................................................................................................26200.05101000000000
droEre2
CGGACAGATGGA--------CGAACA----------------GACGGACGGACAGACAGACATGACCAGATCGACTCGGCTATTGATTATGATCAAGA----ATATATATACTTTA-TATAGTCGGAAATGCTTCATTCTACCTGTTACA-----------------CGAATCTAGTATACCCTTTT-AC------TCTACAAGTAACGGGTATAACAAAA---------T-AGAATG---------------CT--ATAG-TCGAGTTCCCCGACTATCAGATACTCTTTACTCAGC----------------------------------------------------------------------------TAGTAT-AAGTGC----------TA-----AC-------------------------GAGA---------------------------------------------AATTTC----------------AAAATTTTCSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
...........................................................................................................................................................................TCTAGTATACCCTTTT-AC------TCTACAAG...................................................................................................................................................................................................................................................................................................................26120.0811000000
.................................................................................................................................................................................................................................................................................................................................................................................................GC----------TA-----AC-------------------------GAGA---------------------------------------------AATTTC----------------AAA......19200.0510000010
dp5
------GACGGACAGACGGACGGACG----------------GACAGACGGACAGACAGACAGGGCTCAATCGACTCGGCTATTGATGCTGATCAAGA----ATATATATACTTTA-TGGGGTCGGAAACGATTCCTTCTGGACGTTACACACATCCACTTTTACCACAAATCTTATATACCCCAAT-ACTCAT----TTTGAGTATCGGGTATAAAAAGA---------G-CGAACACCGAGGTAAGTGGAGTGTCA-----------------------------------TATACA-GA---------------CTCTTGCA---------------------------------CTTCAAAGTAC------------------AAAGTTACTTTA-----TC------------------------GGTAA---------------------------------------------AAACTC----------------GTGATTATASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
......GACGGACAGACGGACGGACG----------------G....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................212010.60212000000002120
............CAGACGGACGGACG----------------GACAGACGGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................24204.058100000008100
.......ACGGACAGACGGACGGACG----------------GAC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22203.406800000000680
..............................................................................................................................................................................................TCAT----TTTGAGTATCGGGTATAAA......................................................................................................................................................................................................................................................................................................23202.304604600000000
...........ACAGACGGACGGACG----------------GACAGACGGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................25202.154300000004300
.......................................................................................................................................................................................................TTGAGTATCGGGTATAAAAAGA---------G-C......................................................................................................................................................................................................................................................................................24122.002401300003800
..........................................................................................GATCAAGA----ATATATATACTTTA-TGGGG.....................................................................................................................................................................................................................................................................................................................................................................................................27201.152302300000000
...............ACGGACGGACG----------------GACAGACGGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.901801800000000
...........ACAGACGGACGGACG----------------GACAGACGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.851700000000170
..........GACAGACGGACGGACG----------------GACAGACGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.851700000000170
.................GGACGGACG----------------GACAGACGGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.751500000000150
................CGGACGGACG----------------GACAGACGGACAGAC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.701400000001400
...........................................................ACAGGGCTCAATCGACTCGGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................21200.651301300000000
............CAGACGGACGGACG----------------GACAGACG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.601200000001200
...........ACAGACGGACGGACG----------------GACAGACG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.4590000000090
..........................................................................................................................TCGGAAACGATTCCTTCTGGACGTTACA.........................................................................................................................................................................................................................................................................................................................................................................28200.4590900000000
......................GACG----------------GACAGACGGACAGACAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.4590000000900
.......................ACG----------------GACAGACGGACAGACAGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.4590200000700
........................CG----------------GACAGACGGACAGACAGACAGGGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.4590000000072
........................................................................................................................................................................................................................................................................................................................................................................TCAAAGTAC------------------AAAGTTACTTTA-----TC------------------------GG...............................................................................25120.4250000000320
..................................................................................................................TA-TGGGGTCGGAAACGATTC........................................................................................................................................................................................................................................................................................................................................................................................20200.4080800000000
..................GACGGACG----------------GACAGACGGACAGACAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.4080000000080
.......................................................................................................................................................................................................TTGAGTATCGGGTATAAAAAGA---------G-.......................................................................................................................................................................................................................................................................................23200.4080600000110
....................CGGACG----------------GACAGACGGACAGACAGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.3570000000700
...........................................................................................................................CGGAAACGATTCCTTCTGGACG..............................................................................................................................................................................................................................................................................................................................................................................22200.3570000000070
......................................................................................................................................................................................................TTTGAGTATCGGGTATAAAAAGA---------G-C......................................................................................................................................................................................................................................................................................25120.2530200000010
.............................................................................GGCTATTGATGCTGATCAAGA----.........................................................................................................................................................................................................................................................................................................................................................................................................................21200.2550500000000
.....................GGACG----------------GACAGACGGACAGACAGAC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.2550000001400
.......................................................................CGACTCGGCTATTGATGCTGATC.................................................................................................................................................................................................................................................................................................................................................................................................................................23200.2550500000000
........................................................................................................................................................................................................................................................................................................................................................................................................TACTTTA-----TC------------------------GGTAA---------------------------------------------AAACTC----------------GTGAT....25140.2130000000300
..........................................GACAGACGGACAGACAGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.2040400000000
..............GACGGACGGACG----------------GACAGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.2040000000004
.......................ACG----------------GACAGACGGACAGACAGACAGGGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.2040100000300
..................................................................................TTGATGCTGATCAAGA----ATATATA..................................................................................................................................................................................................................................................................................................................................................................................................................23200.2040000000400
...............................................................................................................CTTTA-TGGGGTCGGAAACG............................................................................................................................................................................................................................................................................................................................................................................................19200.2040400000000
............CAGACGGACGGACG----------------GACAGAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.2040400000000
....................................................................................................................................................................................................................ATAAAAAGA---------G-CGAACACC...............................................................................................................................................................................................................................................................................1860.1710010000000
.......................................................................................................................................................................................................TTGAGTATCGGGTATAAAAAGA---------G-CGA....................................................................................................................................................................................................................................................................................2660.1710100000000
........................................................................................................................................................................................................TGAGTATCGGGTATAAAAAGA---------G-C......................................................................................................................................................................................................................................................................................23120.1720000000200
.........................................................................................................................................................................................................................AAGA---------G-CGAACACCGAGGTAAG.......................................................................................................................................................................................................................................................................21130.1520000002000
..................GACGGACG----------------GACAGACGGACAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.1530300000000
..........GACAGACGGACGGACG----------------GACAGACGGAC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.1530000000300
....................................................CAGACAGACAGGGCTCAATCGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.1530300000000
............................................CAGACGGACAGACAGACAGGGCT............................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.1530000000030
..............................................................................................................................................................................................TCAT----TTTGAGTATCGGGTATAAAA.....................................................................................................................................................................................................................................................................................................24200.1530000000300
........................................................................................................ATATATACTTTA-TGGGGTCG..................................................................................................................................................................................................................................................................................................................................................................................................20200.1530000003000
.......................................................................................................................GGGTCGGAAACGATTCCTTCTGGAC...............................................................................................................................................................................................................................................................................................................................................................................25200.1530300000000
..............................................................................................................................................................................................................TCGGGTATAAAAAGA---------G-CGAG...................................................................................................................................................................................................................................................................................2070.1410100000000
.............................................................................................................................................................................................................ATCGGGTATAAAAAGA---------G-CGT....................................................................................................................................................................................................................................................................................2080.1310100000000
.......................ACG----------------GACAGACGGACAGACAGACAGGG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.1020000000011
.............................................................................................................TACTTTA-TGGGGTCGGAAACG............................................................................................................................................................................................................................................................................................................................................................................................21200.1020000002000
..........................................................................................................................................................................................T-ACTCAT----TTTGAGTATCGG.............................................................................................................................................................................................................................................................................................................19200.1020200000000
...........ACAGACGGACGGACG----------------GACAGACGT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.1020200000000
..............................................GACGGACAGACAGACAGGGCTCAAT........................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.1020000000101
.......................................................................................................................................................................................................TTGAGTATCGGGTATAAAAAGA---------.........................................................................................................................................................................................................................................................................................22200.1020200000000
..................GACGGACG----------------GACAGACGGACAGA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.1020200000000
........................................................................................................................................................................................................TGAGTATCGGGTATAAAAAGA---------G-.......................................................................................................................................................................................................................................................................................22200.1020000000020
..............................................GACGGACAGACAGACAGGGCT............................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.1020000000002
................................................................................................GA----ATATATATACTTTA-TGGGG.....................................................................................................................................................................................................................................................................................................................................................................................................21200.1020200000000
.......ACGGACAGACGGACGGACG----------------GACAGACC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.1020000000020
................CGGACGGACG----------------GACAGACGGACAGACA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.1020000000200
........................................................................................CTGATCAAGA----ATATATATACTTTA-TGGG......................................................................................................................................................................................................................................................................................................................................................................................................28200.1020200000000
......................GACG----------------GACAGACGGACAGACAGACAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.1020000000200
.........GGACAGACGGACGGACG----------------GACAGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.1020200000000
............................................CAGACGGACAGACAGACAGG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.1020100000010
.......................ACG----------------GACAGACGGACAGACAGAC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.1020000000200
......................GACG----------------GACAGACGGACAGACAGACAGGG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.1020000000020
...............................................ACGGACAGACAGACAGGG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.1020200000000
................................................................................................................................................................................................AT----TTTGAGTATCGGGTATAAAAAG...................................................................................................................................................................................................................................................................................................24200.1020000000200
.................................................................................................................................CGATTCCTTCTGGACGTTACACACA.....................................................................................................................................................................................................................................................................................................................................................................25200.1020020000000
.................................................................................ATTGATGCTGATCAAGA----ATAT.....................................................................................................................................................................................................................................................................................................................................................................................................................21200.1020000002000
...................................................................................................................................................ACACACATCCACTTTTACCAC.......................................................................................................................................................................................................................................................................................................................................................21200.1020002000000
....................................................CAGACAGACAGGGCTCAATCGACTCGG................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.1020000000020
.............................................................................................CAAGA----ATATATATACTTTA-TG........................................................................................................................................................................................................................................................................................................................................................................................................21200.1020000000020
................CGGACGGACG----------------GACAGACGGAC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.1020200000000
................................................................................................................................ACGATTCCTTCTGGACGTTACACA.......................................................................................................................................................................................................................................................................................................................................................................24200.1020200000000
...............ACGGACGGACG----------------GACAGACGGAC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.1020200000000
..............................................................................................................................................................................................................................................................................................................................................................................TAC------------------AAAGTTACTTTA-----TC------------------------GGT..............................................................................20120.0810000100000
.........................................................................................................................................................................................................GAGTATCGGGTATAAAAAGA---------G-C......................................................................................................................................................................................................................................................................................22120.0810100000000
........................................................................................................................................................................................................................................................................................................ACA-GA---------------CTCTTGCA---------------------------------CTTCAAAGTAC------------------A...........................................................................................................................25150.0710100000000
........................................................................................................................................................................................................................................................................................................................................................................................................TACTTTA-----TC------------------------GGTAA---------------------------------------------AAACTC----------------GT.......22150.0710000000100
........................................................................................................................................................................................................................................................................................................ACA-GA---------------CTCTTGCA---------------------------------CTTCAAAGTAC------------------............................................................................................................................24150.0710100000000
.......................................................................................................................................................................................................................................................................................................TACA-GA---------------CTCTTGCA---------------------------------CTTCAAA..................................................................................................................................................21180.0610100000000
...........................................................................................................................................................................................................................................ACACCGAGGTAAGTGGAGTGT...............................................................................................................................................................................................................................................................21190.0510100000000
............................................CAGACGGACAGACAGACAGGGCTCAAT........................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.0510000000010
...........................................................................................................................................TGGACGTTACACACATCCACT...............................................................................................................................................................................................................................................................................................................................................................21200.0510001000000
...........................................................................................ATCAAGA----ATATATATACTTTA-TGGG......................................................................................................................................................................................................................................................................................................................................................................................................25200.0510100000000
.....................................................................................................................................TCCTTCTGGACGTTACACAC......................................................................................................................................................................................................................................................................................................................................................................20200.0510000001000
.....................GGACG----------------GACAGACGGACAGACAGACA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.0510000000100
......................................................................................................................................................................................................TTTGAGTATCGGGTATAAAAAGA---------G-.......................................................................................................................................................................................................................................................................................24200.0510100000000
......................................................................................TGCTGATCAAGA----ATATAT...................................................................................................................................................................................................................................................................................................................................................................................................................18200.0510000000010
.............................................AGACGGACAGACAGACAGGGCTCAAT........................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.0510000000010
.........GGACAGACGGACGGACG----------------GACAGACGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.0510000001000
..............................................GACGGACAGACAGACAGGGCTCAATC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.0510000000001
........................CG----------------GACAGACGGACAGACAGAC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510010000000
..........................................................................................................ATATACTTTA-TGGGGTCGG.................................................................................................................................................................................................................................................................................................................................................................................................19200.0510000001000
.....................................................................................................................................................ACACATCCACTTTTACCAC.......................................................................................................................................................................................................................................................................................................................................................19200.0510100000000
...............................................................................................................................................................................................CAT----TTTGAGTATCGGGTATAA.......................................................................................................................................................................................................................................................................................................21200.0510000001000
..................................................................................TTGATGCTGATCAAGA----ATATATATAC...............................................................................................................................................................................................................................................................................................................................................................................................................26200.0510000000010
.........................................................................................................................................TCTGGACGTTACACACATCC..................................................................................................................................................................................................................................................................................................................................................................20200.0510000000100
...................ACGGACG----------------GACAGACGGACA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.0510000000100
..................................................................................TTGATGCTGATCAAGA----ATATATAT.................................................................................................................................................................................................................................................................................................................................................................................................................24200.0510100000000
..................GACGGACG----------------GACAGACGGACAGACA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.0510100000000
.............................................AGACGGACAGACAGACAGGGCT............................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.0510000000010
..............................................GACGGACAGACAGACAGG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.0510100000000
.......ACGGACAGACGGACGGACG----------------GACAGACGGAC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................30200.0510000000100
........................................................................................................ATATATACTTTA-TGGGGTCGGAA...............................................................................................................................................................................................................................................................................................................................................................................................23200.0510100000000
....................CGGACG----------------GACAGACGGACAGACC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.0510100000000
..........................................................................CTCGGCTATTGATGCTGATCAAGA----.........................................................................................................................................................................................................................................................................................................................................................................................................................24200.0510100000000
.................GGACGGACG----------------GACAGACGGACAGACAC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.0510010000000
..................GACGGACG----------------GACAGACGGACAGACAGAC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.0510000000010
...............................................ACGGACAGACAGACAGGGCTCA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.0510000000010
.........GGACAGACGGACGGACG----------------GACAGACGGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.0510000000100
.................GGACGGACG----------------GACAGACGGACAGACAGAC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................28200.0510010000000
...............................................ACGGACAGACAGACAGGGCTCAATC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.0510000000100
....................................................................................GATGCTGATCAAGA----ATATATATACT..............................................................................................................................................................................................................................................................................................................................................................................................................25200.0510100000000
......................GACG----------------GACAGACGGACAGACAGACAGG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.0510100000000
................CGGACGGACG----------------GACAGACGGACAGACAGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................28200.0510000000010
.......................................................................................GCTGATCAAGA----ATATATATACTTT............................................................................................................................................................................................................................................................................................................................................................................................................24200.0510010000000
........................................................................................................................................................................................................TGAGTATCGGGTATAAAAAGA---------.........................................................................................................................................................................................................................................................................................21200.0510000000010
...............................................................................................................................AACGATTCCTTCTGGACGTTA...........................................................................................................................................................................................................................................................................................................................................................................21200.0510000000010
............................................CAGACGGACAGACAGACAGGGCTCAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.0510000000010
....................CGGACG----------------GACAGACGGACAGACAGACAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.0510000000100
.............AGACGGACGGACG----------------GACAGACGGACAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.0510000000010
...........................................................ACAGGGCTCAATCGACTCGGCT..............................................................................................................................................................................................................................................................................................................................................................................................................................................22200.0510100000000
...........................................ACAGACGGACAGACAGACAGGGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.0510000000100
................................................................................................................................................................................................AT----TTTGAGTATCGGGTATA........................................................................................................................................................................................................................................................................................................19200.0510000001000
...........................................................................................................................CGGAAACGATTCCTTCTGGACGTTA...........................................................................................................................................................................................................................................................................................................................................................................25200.0510000100000
..............................................................................................................ACTTTA-TGGGGTCGGAAACG............................................................................................................................................................................................................................................................................................................................................................................................20200.0510000000010
droPer2
------GACGGACAGACGGACAGACG----------------GACGGACGGACAGACAGACAGGGCTCAATCGACTCGGCTATTGATGCTGATCAAGA----ATATATATACTTTA-TAGGGTCGGAAACGATTCCTTCTGGACGTTACACACATCCACTTTTACCACAAATCTAATATACCCCAAT-ACTCAT----TTTGAGTATCGGGTATAAAAATG---------A-AAA---------------------------T--------------------------------------------------------------TTCAAAT-----------TT---TTTTTCAAATTTCAAA-----TTTCCAA------A--GTAGC-----CTTATATTCAG---------------------------CC-------------------------------------------------------------------AAAAGATATSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
....................................................................................................................................TTCCTTCTGGACGTTACACACATC...................................................................................................................................................................................................................................................................................................................................................................24200.153030000
................................................................................................................................................................................................AT----TTTGAGTATCGGGTATAAAAATG---------A-AA.....................................................................................................................................................................................................................................................................................28190.051010000
................................................................GCTCAATCGACTCGGCTATTG..........................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051000001
droWil2
CAGACGGACGGACGGACGGACGGACG----------------GACGGACGGACGGACGGACATGGCTATTTCAACTCGTCTCGTCGTGCTGATCAAGA----ATATATATACTTTA-TATGGTCGGAAATGCTTCCTTCTATGCGTTGCACACT-------TCTGACCAAAATTAATATACCCTTTT-----------TGCA-----AGGGTATAAAAACGTTTTATCTAA-AAAGGC---------------TAAT-----------------------------------A---------TTGCG------------------------------------------------------------------AAAGAACGGCCTACAAT-----CTTA------G---------------------CATAGGAA---------------------------------------------AGAACG----------------AAGATATTGSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.....................................................................................................................................TCCTTCTATGCGTTGCACACT-------TCTG..........................................................................................................................................................................................................................................................................................................................................................25200.30600060
..................................................................................................................TA-TATGGTCGGAAATGCTTCC.......................................................................................................................................................................................................................................................................................................................................................................................21200.10202000
..............................................................................................................................................GCGTTGCACACT-------TCTGACC.......................................................................................................................................................................................................................................................................................................................................................19200.10202000
.............................................................................................................................................................................................................................................................................................................................................................................................................TA------G---------------------CATAGGAA---------------------------------------------AGAACG----------------AAGA.....21200.05100100
..............................................................................................................ACTTTA-TATGGTCGGAAATGC...........................................................................................................................................................................................................................................................................................................................................................................................21200.05100010
.......................................................................................................................................CTTCTATGCGTTGCACACT-------TCTGACC.......................................................................................................................................................................................................................................................................................................................................................26200.05101000
....................................................................................................................................................................................................................................................................................................................................................................................................AT-----CTTA------G---------------------CATAGGAA---------------------------------------------AGAACG----------------AAGATA...27200.05101000
..............................................................................................................................................GCGTTGCACACT-------TCTGACCAAAA...................................................................................................................................................................................................................................................................................................................................................23200.05100010
............................................................................................................ATACTTTA-TATGGTCGGAAATGCT..........................................................................................................................................................................................................................................................................................................................................................................................24200.05101000
droVir3
CAGACAGACGGA--------CAGACG----------------GATAGACGGACAGACGGACATGCCTATATCGACTCGGCTGTTGATGCTGATTAAGA----ATATATATACTTTA-TGGGGTCGGAGATGTCTCCTTCTATGCGTTACACATT-------TCACGACAAAATTATAATACCCT-------------CTGCA-----AGGATATAAAAAGC---------G-TAAC-C-----------AGCCTGTCATCCTTCCAGTCCCTTCAATACAGGG---------------------------------------------------------------------------------------------------------------------------------TACCATTTCTGCCCC----AAAA---------------------------------------------A-----------------------------ASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
............................................................................................TTAAGA----ATATATATACTTTA-TGGGG.....................................................................................................................................................................................................................................................................................................................................................................................................25201.25250010000000000000000000000024000000000000000000000000000000000000
.................................................................................................................................................TTACACATT-------TCACGACAAAATTATAA.............................................................................................................................................................................................................................................................................................................................................26200.95190000000000000000000000000019000000000000000000000000000000000000
.................................................................................................................................................TTACACATT-------TCACGACAAA....................................................................................................................................................................................................................................................................................................................................................19200.306000000000000000000000000000000000000240000000000000000000000000
.................................................................................................................................................TTACACATT-------TCACGACAAAATTATA..............................................................................................................................................................................................................................................................................................................................................25200.306000000000000000000000000030030000000000000000000000000000000000
..............................................................................................AAGA----ATATATATACTTTA-TGGGGTC...................................................................................................................................................................................................................................................................................................................................................................................................25200.306000000000000000000000000006000000000000000000000000000000000000
.................................................................................................................................................TTACACATT-------TCACGACAAAAT..................................................................................................................................................................................................................................................................................................................................................21200.204000000000000000000000000000010000000300000000000000000000000000
......................................................................................................................................................................................................................AAAAAGC---------G-TAAC-C-----------AGCCTGTCATTA..........................................................................................................................................................................................................................................................2560.171000000000000000000000000001000000000000000000000000000000000000
.................................................................................................................................................TTACACATT-------TCACGACAAAATTATAATA...........................................................................................................................................................................................................................................................................................................................................28200.153001000000000000000000000000000010000100000000000000000000000000
..............................................................................GCTGTTGATGCTGATTAAGA----ATATAT...................................................................................................................................................................................................................................................................................................................................................................................................................26200.153000000000000000000000000003000000000000000000000000000000000000
.................................................................................................A----ATATATATACTTTA-TGGGGTCGG.................................................................................................................................................................................................................................................................................................................................................................................................24200.153000000000000000000000000000030000000000000000000000000000000000
............................................................................................TTAAGA----ATATATATACTTTA-TGGGGTC...................................................................................................................................................................................................................................................................................................................................................................................................27200.153000000000000000000000000030000000000000000000000000000000000000
.................................................................................................................................................TTACACATT-------TCACGACAAAATTATAATAC..........................................................................................................................................................................................................................................................................................................................................29200.153000000000000000000000000000300000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................TTCCAGTCCCTTCAATACAGG.....................................................................................................................................................................................................................................21200.102002000000000000000000000000000000000000000000000000000000000000
................................................................................................................TTTA-TGGGGTCGGAGATGTCTCCTTC....................................................................................................................................................................................................................................................................................................................................................................................26200.102000000000000000000000000000000000002000000000000000000000000000
...........................................................................................................................................................................................................................................................................TCCCTTCAATACAGGG---------------------------------------------------------------------------------------------------------------------------------TACCATTTC..........................................................................................25200.102000000000000000000000000000000000000000000000000000000000000002
.........................................................................................................................................TCTATGCGTTACACATT-------TCACGACAAA....................................................................................................................................................................................................................................................................................................................................................27200.102000000000000000000000000002000000000000000000000000000000000000
.................................................................................................................TTA-TGGGGTCGGAGATGTCTCCTTC....................................................................................................................................................................................................................................................................................................................................................................................25200.102000000000000000000000000000100010000000000000000000000000000000
..........................................................................................................ATATACTTTA-TGGGGTCGGAG...............................................................................................................................................................................................................................................................................................................................................................................................21200.102000000000000000000000000000020000000000000000000000000000000000
...........................................................................................................................................TATGCGTTACACATT-------TCACGACAAAAT..................................................................................................................................................................................................................................................................................................................................................27200.102000000000000000000000000000000002000000000000000000000000000000
........................................................................................................................................TTCTATGCGTTACACATT-------TCACGACA......................................................................................................................................................................................................................................................................................................................................................26200.102001000000000000000000000000000010000000000000000000000000000000
..........................................GATAGACGGACAGACGGACAT................................................................................................................................................................................................................................................................................................................................................................................................................................................................21120.081000000000000000000000000000010000000000000000000000000000000000
.....................................................................................ATGCTGATTAAGA----ATATATATACT..............................................................................................................................................................................................................................................................................................................................................................................................................24200.051000000000000000000000000100000000000000000000000000000000000000
.....................................................................................................................................TCCTTCTATGCGTTACACATT-------TCACGACA......................................................................................................................................................................................................................................................................................................................................................29200.051000000000000000000000000000100000000000000000000000000000000000
...............................................................................................AGA----ATATATATACTTTA-TGGGGTCG..................................................................................................................................................................................................................................................................................................................................................................................................25200.051000000000000000000000000000000000000001000000000000000000000000
...........................................................................................................................................TATGCGTTACACATT-------TCACGA........................................................................................................................................................................................................................................................................................................................................................21200.051000000000000000000000000000000000000010000000000000000000000000
..........................................................................................................................................CTATGCGTTACACATT-------TCACGACAAAAT..................................................................................................................................................................................................................................................................................................................................................28200.051000000000000000000000000010000000000000000000000000000000000000
..................................................................................................................................................TACACATT-------TCACGACAAAATTATAAT............................................................................................................................................................................................................................................................................................................................................26200.051000000000000000000000000000010000000000000000000000000000000000
...............................................................................................................CTTTA-TGGGGTCGGAGATGTCT.........................................................................................................................................................................................................................................................................................................................................................................................22200.051000000000000000000000000001000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................TCCAGTCCCTTCAATACAGGG---------------------------------------------------------------------------------------------------------------------------------TACCATT............................................................................................28200.051001000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................TGTCTCCTTCTATGCGTTACACA.......................................................................................................................................................................................................................................................................................................................................................................23200.051000000000000000000000000000000000010000000000000000000000000000
...................................................................................................................................................ACACATT-------TCACGACAAAATTATA..............................................................................................................................................................................................................................................................................................................................................23200.051001000000000000000000000000000000000000000000000000000000000000
....................................................................................GATGCTGATTAAGA----ATAT.....................................................................................................................................................................................................................................................................................................................................................................................................................18200.051000000000000000000000000000010000000000000000000000000000000000
............................................................................................TTAAGA----ATATATATACTTTA-TGGGGT....................................................................................................................................................................................................................................................................................................................................................................................................26200.051000000000000000000000000000010000000000000000000000000000000000
...................................................................................................................A-TGGGGTCGGAGATGTCTCC.......................................................................................................................................................................................................................................................................................................................................................................................20200.051000000001000000000000000000000000000000000000000000000000000000
..................................................................................................................TA-TGGGGTCGGAGATGTCTCC.......................................................................................................................................................................................................................................................................................................................................................................................21200.051000000000100000000000000000000000000000000000000000000000000000
.........................................................................................TGATTAAGA----ATATATATACTTTA-TGGG......................................................................................................................................................................................................................................................................................................................................................................................................27200.051000000000000000000000000000000000010000000000000000000000000000
........................................................................................................................................................................AAAATTATAATACCCT-------------CTGCA-----A...............................................................................................................................................................................................................................................................................................................22200.051000000000000000000000000100000000000000000000000000000000000000
............................................................................................TTAAGA----ATATATATACTTTA-TGG.......................................................................................................................................................................................................................................................................................................................................................................................................23200.051000000000000000000000000001000000000000000000000000000000000000
......................................................................................................................................................................................................................AAAAAGC---------G-TAAC-C-----------AGCCTGTC..............................................................................................................................................................................................................................................................21200.051000000000000000000000000001000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................CCCTTCAATACAGGG---------------------------------------------------------------------------------------------------------------------------------TACCATTTCTG........................................................................................26200.051001000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................T-------TCACGACAAAATTATAA.............................................................................................................................................................................................................................................................................................................................................18200.051000000000000000000000000000000000000100000000000000000000000000
......................................................................................TGCTGATTAAGA----ATATAT...................................................................................................................................................................................................................................................................................................................................................................................................................18200.051000000000000000000000000000000010000000000000000000000000000000
.............................................................................................TAAGA----ATATATATACTTTA-TGGGGTCG..................................................................................................................................................................................................................................................................................................................................................................................................27200.051000000000000000000000000000000000000100000000000000000000000000
.............................................................................................................................................TGCGTTACACATT-------TCACGACAAAAT..................................................................................................................................................................................................................................................................................................................................................25200.051000000000000000000000000000000000010000000000000000000000000000
droMoj3
CGGACGGACGGACGGACGGACGGACG----------------GACGGACGGACAGACGGACAGGGCTATATCGACTCAGCTCGTCACGCTGATCAAGA----ATATATATACTTTG-TGGGGTCTGCCACGCCTCCTTCTGCCCGTTACATACT-------TTTTCACAAAACCATTATACCCTGATTTCCCATTTTCAATGGGTTCAGGGTATAATAATA---------A-GAAA-T--------------GTATT-----------------------------------ATCAACA-CATTAATCAAACATC------------------------------------------------------------------AGGTGTAAA-----TTTA-----AC-------------------------AG-G---------------------------------------------CAACTA----------------AAGTTCTTASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
..........................................................................................................................TCTGCCACGCCTCCTTCTGCC................................................................................................................................................................................................................................................................................................................................................................................21200.75150000150
..............GACGGACGGACG----------------GACGGAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.051000001
...........................................ACGGACGGACAGACGGACAGG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051100000
CGGACGGACGGACGGACGGAC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051000001
..............................................................................................................ACTTTG-TGGGGTCTGCCACG............................................................................................................................................................................................................................................................................................................................................................................................20200.051100000
droGri2
-----------------------ACG----------------GACAGACTGCCAGACGAACATGGGCACATCGACTCGGCTAGCGATGCTGATAAAGA----ATATATATATTTGAGGGGGGTCGGATATGTTGCCTACAATGCATTACAAACT-------CGAAATCAAAATGATAATATCAT-------------CTACA-----AGGACATTAAAATG---------TATA-AAA---------------GT--------------------------------------------C-------------------------TTGTGG--------TATATTTAG---------TCGAAGC-----TTTATAACCCTAAAGAGCAGG-----AGTA------A---------------------------------------------------------------------------------------------------GAAAAGSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/18/2015 at 03:04 AM