ID:

dan_1770

 Coordinate:

scaffold_13266:4204891-4205128 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-25.3 -25.3 -25.1

Flybase annnotation

intron [Dana\GF12764-in]; CDS [Dana\GF12764-cds]; exon [dana_GLEANR_12781:3]; CDS [Dana\GF12764-cds]; exon [dana_GLEANR_12781:2]; intron [Dana\GF12764-in]

No Repeatable elements found

Sense Strand Reads

##################################################----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------######################################------------
CGACCGGCCAGTCCCGTCTGTGCACCTTTTTCGAGAACCTTGGATGGAAGGTGAGTGTCGCGGGTGTTGCAAGTTTGTTTTTTGGGGTTAATGATAATAGGATAGACTAAGGCTAAGGGCAGCTTCGTAAGTAGTGCCCCCAATGGGATAGGGAATGGGAATGGGAATGGGAGGTGATGCGGGTTCATTTTTTTGGTTACAACTCCTGATACAGAATGATACTCTTGTTAAATTCTTATTGCCCCCGAAAACTCGAAACAAAGCAATGAGCATGTTAAATATTTTCAGGTATTCCGCGTGCCTGAAACGGCCACTGTTTTACTCAGGTAAATGCTCTC
**********************************************************************************************************************************************.((((...((.(((((((((...((((((((...........(((((((((.((........)).))...)))))))..))))))))..))))))))).)))))).****************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total V106
head
 M044
female body
 M058
embryo
 V039
embryo
 V105
male body		 V055
head
........................................TGGATGGAAGGTGAGTGTCGC..................................................................................................................................................................................................................................................................................... 21 0 1 2.00 2 2 0 0 0 0 0
................................................................................................................................................................................................................................................................................................GTATTCCGCGTGCCTGAAACGGC........................... 23 0 1 1.00 1 0 0 1 0 0 0
.....................................................................................................................................................................................................................................AAATTCTTATTGCCCCCGA.......................................................................................... 19 0 1 1.00 1 0 0 0 1 0 0
..................................................................................................................................................................................................................................................................................................ATTCCGCGTGCCTGAAACGGCC.......................... 22 0 1 1.00 1 0 0 1 0 0 0
.............................................................................................................................................................................................................................................................................................................CTGAAACGGCCACTGTTTTACTCAG............ 25 0 1 1.00 1 1 0 0 0 0 0
..............................................................................................................................................................................................................................................................................................................TGAAACGGCCACTGTTTTA................. 19 0 1 1.00 1 0 1 0 0 0 0
......................................................................................................................................................................................................................................................................................................................CCACTGTTTTACTCAGGTAA........ 20 0 1 1.00 1 0 1 0 0 0 0
..............................................................................................................................................ATGGGATAGGGAATGGGAATGGG............................................................................................................................................................................. 23 0 1 1.00 1 0 0 0 0 1 0
...........................................ATGGAAGGTGAGTGTCGCGGG.................................................................................................................................................................................................................................................................................. 21 0 1 1.00 1 0 1 0 0 0 0
..............................................................................................................................................................................................................................................................................................................TGAAACGGCCACTGTTTTACTCAGT........... 25 1 1 1.00 1 0 1 0 0 0 0
......................................CTTGGATGGAGGGTGAGTGTCGC..................................................................................................................................................................................................................................................................................... 23 1 1 1.00 1 1 0 0 0 0 0
..................................................................................................................................................................................................................................................................................................ATTCCGCGTGCCTGAAAC.............................. 18 0 1 1.00 1 0 0 0 1 0 0
...............................................................................................................................................TGGGATAGGGAATGGGAATGG.............................................................................................................................................................................. 21 0 1 1.00 1 0 1 0 0 0 0
...............................................AAGGTGAGTGTCGCGGGTGTT.............................................................................................................................................................................................................................................................................. 21 0 1 1.00 1 1 0 0 0 0 0
..............................................................................................................................................ATGGGATAGGGAATGGGAATGGT............................................................................................................................................................................. 23 1 1 1.00 1 1 0 0 0 0 0
...................................................................................................................................................................................................................................................................................................................CGGCCACTGTTTTACTCAG............ 19 0 1 1.00 1 1 0 0 0 0 0
............................TTTCGAGAACCTTGGATGGAAG................................................................................................................................................................................................................................................................................................ 22 0 1 1.00 1 0 0 1 0 0 0
...................................................................................................................................................................................................................................................................................................TTACGCGTGCCTGAAACGGCCACTG...................... 25 1 1 1.00 1 0 0 1 0 0 0
.....................................................................................................................................................AGGGAATGGGAATGGGAATGG........................................................................................................................................................................ 21 0 4 0.75 3 0 0 1 1 1 0
........................................................................................................................................................GAATGGGAATGGGAATGGGA...................................................................................................................................................................... 20 0 20 0.65 13 0 2 0 0 11 0
.....................................................................................................................................................AGGGAATGGGAATGGGAATGGGA...................................................................................................................................................................... 23 0 4 0.50 2 2 0 0 0 0 0
.....................................................................................................................................................AGGGAATGGGAATGGGAATGGG....................................................................................................................................................................... 22 0 4 0.25 1 0 0 1 0 0 0
........................................................................................................................................................GAATGGGAATGGGAATGGG....................................................................................................................................................................... 19 0 20 0.25 5 4 0 1 0 0 0
...................................................................................................GGATTGACTAAGGCGACGGG........................................................................................................................................................................................................................... 20 3 4 0.25 1 0 1 0 0 0 0
.................................................................................................................................................................TGGTATTGGCAGGTGATGCGG............................................................................................................................................................ 21 3 4 0.25 1 0 0 0 0 0 1
........................................................................................................................................................GAATGGGAATGGGAATGG........................................................................................................................................................................ 18 0 20 0.20 4 0 0 0 0 4 0
.....................................................................................................................................................AGGGAATGGGAATGGGAATG......................................................................................................................................................................... 20 0 5 0.20 1 0 1 0 0 0 0
......................................................................AAGCTTGCTTCTTGGGGTT......................................................................................................................................................................................................................................................... 19 3 18 0.17 3 0 2 0 0 1 0
....................................................................................................GAAAGAGTAAGGCTAAGG............................................................................................................................................................................................................................ 18 2 6 0.17 1 0 0 0 0 0 1
...........................................................................................................................................................................................................................................................................................................................GTTTTACTGAGATAAATGCC... 20 3 7 0.14 1 0 0 1 0 0 0
.....................................................................................................................................................AGGGAATGGGAATGGGAAT.......................................................................................................................................................................... 19 0 8 0.13 1 0 0 1 0 0 0
......................................................................................................................................................GGGAATGGGAATGGGAATG......................................................................................................................................................................... 19 0 20 0.10 2 0 0 0 0 2 0
.........................................................................................................................................................................GGGGCTGATCCGGGTTCAT...................................................................................................................................................... 19 3 20 0.05 1 0 0 0 0 0 1
......................................................................................................................................................GGGAATGGGAATGGGAATGG........................................................................................................................................................................ 20 0 20 0.05 1 0 0 0 0 1 0
......................................................................................................................................................................ATGGGAGGTGACGTGAGT.......................................................................................................................................................... 18 3 20 0.05 1 0 0 0 0 0 1
.......................................................................................................................................................GGAATGGGAATGGGAATGG........................................................................................................................................................................ 19 0 20 0.05 1 0 1 0 0 0 0

Anti-sense strand reads

GCTGGCCGGTCAGGGCAGACACGTGGAAAAAGCTCTTGGAACCTACCTTCCACTCACAGCGCCCACAACGTTCAAACAAAAAACCCCAATTACTATTATCCTATCTGATTCCGATTCCCGTCGAAGCATTCATCACGGGGGTTACCCTATCCCTTACCCTTACCCTTACCCTCCACTACGCCCAAGTAAAAAAACCAATGTTGAGGACTATGTCTTACTATGAGAACAATTTAAGAATAACGGGGGCTTTTGAGCTTTGTTTCGTTACTCGTACAATTTATAAAAGTCCATAAGGCGCACGGACTTTGCCGGTGACAAAATGAGTCCATTTACGAGAG
******************************************************************************************.((((...((.(((((((((...((((((((...........(((((((((.((........)).))...)))))))..))))))))..))))))))).)))))).********************************************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total V039
embryo
 M044
female body
 M058
embryo
 V106
head
 V055
head
..........................................................................................................................GCAGCATTGATTACGGGGGTT................................................................................................................................................................................................... 21 3 1 1.00 1 0 1 0 0 0
...............................................................................................................................................................................................................................................................................................CCGTAAGGCGCACGGAAT................................. 18 2 3 1.00 3 0 0 0 3 0
.................................................................................................................................................................................................CCCAATGTTGAGGACAAT............................................................................................................................... 18 2 1 1.00 1 1 0 0 0 0
..............................AGCTCTTGGGACCTACCTTC................................................................................................................................................................................................................................................................................................ 20 1 1 1.00 1 0 1 0 0 0
..............................................................................................................................................................................................AAAACCATTGTTGAGGACAA................................................................................................................................ 20 2 1 1.00 1 1 0 0 0 0
........................................................................................................................................................................................................................................................................TTACTCGAACAATTTATTAGAGT................................................... 23 3 1 1.00 1 1 0 0 0 0
..........................................................................................................................................................................................................................................................................................TTAGTTCATAAGGCGCACGGA................................... 21 3 1 1.00 1 0 0 1 0 0
..........................................................................................................................................................................................AAAAAAAACCATTGTTGAGGACAA................................................................................................................................ 24 3 2 0.50 1 1 0 0 0 0
...............................................................................................................................................................................................AAACCATTGTTGAGGACAA................................................................................................................................ 19 2 3 0.33 1 0 0 1 0 0
.................................................................................................................ATTCCCTTAGGAGCATTCA.............................................................................................................................................................................................................. 19 3 13 0.31 4 0 0 0 4 0
..............................................................................................................................................................................................ACCACCAATGTTGAGGACAAT............................................................................................................................... 21 3 4 0.25 1 1 0 0 0 0
............................................................................................................................AGCATTGATTACGGGGGT.................................................................................................................................................................................................... 18 2 5 0.20 1 0 1 0 0 0
...............................................................................................................................................................................................................................................................................................................................AAGAGACCATTTACGAGA. 18 2 6 0.17 1 1 0 0 0 0
...............................................................CACCACGGTCAAACAAAAAAT.............................................................................................................................................................................................................................................................. 21 3 6 0.17 1 0 0 1 0 0
...........................................................................................................................................GGTTACCCTGTCCCTTAACA................................................................................................................................................................................... 20 3 11 0.09 1 0 0 0 0 1
............................................................................................................................................................................CCACCAGGCCCAAGAAAAAAA................................................................................................................................................. 21 3 14 0.07 1 0 0 1 0 0
.............................................................CCCTCAACGTTCAAGCACAA................................................................................................................................................................................................................................................................. 20 3 15 0.07 1 0 0 0 0 1
..............................................................CCACACCGATCAAACAAA.................................................................................................................................................................................................................................................................. 18 2 16 0.06 1 0 0 1 0 0
..............................................................................................................................................................................................................................................................................................CCCATAAGGGGCACGGACG................................. 19 3 16 0.06 1 0 0 0 0 1
...............................................................................................................................................................................................ATACCATTGTTGAGGACAAT............................................................................................................................... 20 3 17 0.06 1 1 0 0 0 0
................................................................................................................................................................................................CACCACTGTTGAGGACAAT............................................................................................................................... 19 3 18 0.06 1 1 0 0 0 0
...............................................................................................................................................................................................................................................................................................CCGTAAGTCGCACGGAAT................................. 18 3 20 0.05 1 0 0 0 1 0
.................................................................................................................................................................................................ACCATTGTTGAGGACAATT.............................................................................................................................. 19 3 20 0.05 1 0 0 1 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droAna3 scaffold_13266:4204841-4205178 + dan_1770 CGACCGGCCAGTCCCGTCTGTGCACCTTTTTCGAGAACCTTGGATGGAAGGTGAGTGTCGCGGGTG-TTGCAAG-TTT----GTTT--T-------TTGGGGT-----------------T---AATGAT---------------------------------------AATAGG----------------------------------------------------ATAGACTAAGGCTA-----------------------AGGGCAGCTTCGTAAGTAGTGCCC----CCAA---TGGG-----------------------------------ATAGGGAATGGGAATGGGAATGGGAGGT---------------GATGCGGGTTCATTTTTTTGGTT--ACAACTCCTGATACAGAATGATAC---T----CTTGT-TAAATTCTTATTGCCCCCGAA----A-------ACTCGAAACAAAGCAATGAGCATGTTAAATATTTTCAGGTATTCCGCGTGCCTGAAACGGCCACTGTTTTACTCAGGTAAATGC-TCTC
droBip1 scf7180000395751:20946-21245 + CGACTGGCCAGTCCCGCCTGTGCACCTTCTTCGAGAACCTTGGATGGAAGGTGAGTGTCGGGGGTG-TTGCA--------------A-------------------------------------------------------------------------------------GGGG--AT--------------------------------------GCTAGG---ATAGACTAAGGCTAAG---GCGATTGCTTCGGGATGGGGGGCAGCTCCGTAAGTAGTGCCC----CTGA---TGGGTGA--CGGCGG------------------------A---------------GGAGTGGGAGCA---------------GAAGCGGGTTCACTTTTT--CTT--A----------------------C------------------TTCTTATTGCCCC-CGA----A-------ACTCGAAACAAAGCAATGAGCATGTTAAATATTTTCAGGTATTCCGCGTGCCTGAAACGGCCACTGTTTTACTCAGGTAAATGC-TCTC
droKik1 scf7180000302639:34271-34592 - CGACGGGCCAGTCCCGATTGTGCACCTTCTTCGAGAACCTTGGATGGAAGGTGAGTGTCGTGGGG--AAGCA--------------AT------------GG-------------------------------------------GATGG-------------------GATGGGACCATGGGGGCATTTTGGGGGGATCCTGG--------------GGC--GATCCTAG-------------------------------------------TGTAAGTGGTGCCCAAGCAG--AGGCGGGCGA--CGGCG------------------------AA---------------AGAGGATGATGAGG---A---------GTAGCG---TCACCTTTA--GAGATA----------------------C-TCCCTCCTCTCTTAAAATTTCTATTGCCCCCTGA----A----A--AC-CGAAACAAAGCAATGAGCATGTTAAATATTTTCAGGTATTCCGCGTGCCTGAAACGGCCACTGTTTTACTCAGGTAAATGC-TCTC
droFic1 scf7180000453583:60734-61050 - CGACGGGACAGTCCCGATTGTGCACCTTCTTCGAGAACCTTGGATGGAAGGTGAGTGTCGTGGGG--AATC--------------TGTTTGGCTTTATG-GGGAT------------------T---GG-------------------G-----------------G--GATGGGA--AT--------------------------------------GCC--GATCCTAGACTAAGGCAA-GTTAGCGAT--------ACCG-CGGGCAGCTCTGTAAGTAG-------------AGG---------------------------------------------------------AGAAAG---TGG---AGCCACGGCAGTAGCGGGATTACCTTTA--GAT--T----------------------C-CCC----CTCAT-TACCATTCTATTGCCCC-GAA----A-------ACTCGAAACAAAGCAATGAGCATGTTAAATATTTTCAGGTATTCCGCGTGCCTGAAACGGCCACTGTTTTACTCAGGTAAATTC-TCTC
droEle1 scf7180000489694:178366-178682 - CGACTGGCCAGTCCCGCCTGTGCACCTTTTTTGAGAACCTTGGATGGAAGGTGAGTGTCGTGGGTG-TTTT-----------GTCG--T--------TGAGG-------------------------------------------GATGG-------------------GATGGGA--AT--------------------------------------GTC--GATCCTAGACTAAGGCAA-GATAGCGATTGCTTTGGGCCG-CGGGCTGCTCTGTAAGTAG-------------AGG---------------------------------------------------------AGAATG---TGA---GGCCGTGGCTGCAGCGGGATTACCTTTA--GAT--A----------------------C-TCC----CACTT-TACAATTCTATTGCCCC-GAA----A-------ACTCGAAACAAAGCAATGAGCATGTTAAATATTTTCAGGTATTCCGCGTGCCTGAAACGGCCACTGTTTTACTCAGGTAAATTC-TCTC
droRho1 scf7180000779872:72425-72730 - CGACGGGCCAGTCCCGATTGTGCACCTTCTTTGAGAACCTTGGATGGAAGGTGAGTGTCGTGGGTG-TTTT--------------------------TGGG--------------------------------------------------------------------GATGGGA--AT--------------------------------------GTC--GATCCTAGACTAAGGCAA-GATAGCGATTGCTTTGGGCAG-CGGGCAGCTCTGTAAGTAG-------------AGG---------------------------------------------------------AGAAAG---TGA---AGCCATGGCTGCAGCGGGATTACCTTTA--GAT--A----------------------C-TCC----CACTT-TACATTTCTATTGCCCC-GAA----A-------ACTCGAAACAAAGCAATGAGCATGTTAAATATTTTCAGGTATTCCGCGTGCCTGAAACGGCCACTGTTTTACTCAGGTAAATTC-TTTC
droBia1 scf7180000302292:2367850-2368177 - CGACGGGACAGTCCCGGTTGTGCACCTTCTTCGAGAACCTTGGATGGAAGGTGAGTGTCGTGGGTG-TTTC--------------TC----------TGGGG-------------------------------------------GATGAT-----AAATGGCGGGA-CGATGGGA--AT--------------------------------------GCC--GATCCTAGACTTAGGCAA-GTTAGCGATTGCTTTGGGCCG-CGGGCAGCTCTGTAAGTAG-------------AGG---------------------------------------------------------AGAACG---AAG---AGCCATGGCGGTAGCGGGATTACCTTTA--GAT--A----------------------CTCCC----CTCAT-TACAATTCTATTGTCCC-GAA----A-------ACTCGAAACAAAGCAATGAGCATGTTAAATATTTTCAGGTATTCCGCGTGCCTGAAACGGCCACTGTTTTACTCAGGTAAATTC-TCTC
droTak1 scf7180000416016:389594-389921 + CGACGGGACAGTCCCGGTTGTGCACCTTCTTCGAGAACCTTGGATGGAAGGTGAGTGTCGTGGGTG-TTTTCAT-TTTGTTCG--T--T-------TTGGGG---------------------------------------------AGG-------------------GATGGGA--CT--------------------------------------GCCTAGATCCTAGACTTAGGCGA-ATTAGCGATTGCTTTGGGCCG-CGGGCAGCTCTGTAAGTAG-------------AAG---------------------------------------------------------AGAATGAAGAG----AGCCATGGCGGTAGCGGGATTACCTTTA--GAT--A----------------------C-TCC----CTCAT-TACAATTCTATTGTCCC-GAA----A-------ACTCGAAACAAAGCAATGAGCATGTTAAATATTTTCAGGTATTCCGCGTGCCTGAAACGGCCACTGTTTTACTCAGGTAAATTC-TCTC
droEug1 scf7180000409672:3345801-3346154 - CGACAGGCCAGTCCCGTTTGTGCACCTTCTTTGAGAACCTTGGATGGAAGGTGAGTGTCGTGGGTGTATTGTATGTGTGTTTGTTT--T--------TGGGGGAAAAGGGAAGAAAAAGTTATT---GGG---------------------------------------AATGGGA--AT--------------------------------------GCC--GATCCTAGACTACGGCAA-GTTAGCTATTGCTTTGGGCCG-CGGGCAGCTCTGTAAGTAG-------------AGG---------------------------------------------------------AGAAA----TGATTGAGCCATGGCGATAGCGGGATTACCTTTA--GAT--A----------------------C-TCC----CTCAT-TACAATTCTATTGTCCC-GAAAAA-A-------ACTCGAAACAAAGCAATGAGCATGTTAAATATTTTCAGGTATTCCGCGTGCCTGAAACGGCCACTGTTTTACTCAGGTAAATTC-TCTC
dm3 chr2R:14325433-14325762 - CGACGGGACAGTCCCGCTTGTGCACTTTCTTCGAAAACCTTGGATGGAAGGTGAGTGTCGTGGGTGGATTC--------------TATT---------GGGGG------------------------------------------AATGGG-----AAATGG---GA--AATGGGT--AT--------------------------------------GCC--GATCCTAGACTAAGGCAA-GTTAGCGATTGCTTTGGGCCG-CGGGCCGCTCTGTAAGTAG-------------AGG---------------------------------------------------------AGGAAG---TGA---AGCCATGGCGATAGCGGGATTACCTTTA--GAT--ACGAT-------------------TCCC----CTCAT-TACAATTCTATTGTGCC-GAA----A-------ACTCGAAACAAAGCAATGAGCATGTTAAATATTTTCAGGTATTCCGCGTGCCTGAAACGGCCACTGTTTTACTCAGGTAAATTC-CCTC
droSim2 2r:14995292-14995613 - dsi_3030 CGACGGGACAGTCCCGCTTGTGCACTTTCTTCGAAAACCTTGGATGGAAGGTGAGTGTCGTGGGTG-ATTC--------------TATT---------GGGGGAA------------------T---GGG------------------------------------A--AATGGGT--AT--------------------------------------GCC--GATCCTAGACTAAGGCAA-GTTAGCGATTGCTTTGGGCCG-CGGGCAGCTCTGTAAGTAG-------------AGG---------------------------------------------------------AGGAAG---TGA---AGCCATGGCGATAGCGGGATTACCTTTA--GAT--ACGAT-------------------TCCC----CTCAT-TACAATTCTATTGTGCC-GAA----A-------ACTCGAAACAAAGCAATGAGCATGTTAAATATTTTCAGGTATTCCGCGTGCCTGAAACGGCCACTGTTTTACTCAGGTAAATTC-CCTC
droSec2 scaffold_1:11802170-11802491 - CGACGGGACAGTCCCGCTTGTGCACTTTCTTCGAAAACCTTGGATGGAAGGTGAGTGTCGTGGGTG-ATTC--------------TATT---------GGGGGAA------------------T---GGG------------------------------------A--AATGGGT--AT--------------------------------------GCC--GATCCTAGACTAAGGCAA-GTTAGCGATTGCTTTGGGCCG-CGGGCAGCTCTGTAAGTAG-------------AGG---------------------------------------------------------AGGAAG---TGA---AGCCATGGCGATAGCGGGATTACCTTTA--GAT--ACGAT-------------------TCCC----CTCAT-TACAATTCTATTGTGCC-GAA----A-------ACTCGAAACAAAGCAATGAGCATGTTAAATATTTTCAGGTATTCCGCGTGCCTGAAACGGCCACTGTTTTACTCAGGTAAATTC-CCTC
droYak3 2R:14860771-14861124 + dya_575 CGACGGGACAGTCCCGCTTGTGTACCTTCTTCGAGAACCTTGGATGGAAGGTGAGTGTCGTGGGTG-ATTC--------------TATT-------TTGGGGA-----------------G---AATGTGAAATGGGAACTGGGGAATGGG-----TAATGG---GT--AATGGGA--AT--------------------------------------GCC--GGTCCTAGACTAAGGCAA-GTTAGCGATTGCTTTGGGCCT-CGGGCAGCTCTGTAAGTAG-------------AGG---------------------------------------------------------AGGAGGATAAGA---AGCCATGGCGATAGCGGGATTACCTTTA--GAT--A--AA-------------------TCCC----CTCAT-TACAATTCTATTGTCCC-GAA----A-------ACTCGAAACAAAGCAATGAGCATGTTAAATATTTTCAGGTATTCCGCGTGCCTGAAACGGCCACTGTTTTACTCAGGTAAATTC-CCTC
droEre2 scaffold_4845:8533211-8533562 - CGACGGGACAGTCCCGCCTGTGCACCTTCTTCGAGAACCTTGGATGGAAGGTGAGTGTCGTGGGTG-ATTC--------------TATT---------GGGTG---------------------AATGGGA-ATGGGAAC-GGGGAATGGGAATGGGAATGG---GAATGATGGGA--AT--------------------------------------GCC--GATCCTAGACTAAGGCAA-GGTAGCGATTGCTTTGGGCCG-CGGGCAGCTCTGTAAGTAG-------------AGG---------------------------------------------------------AGGATG---AGA---AGCCATGGCGATAGCGGGATTACCTTTA--GAT--A----------------------CTCCC----CTCAT-TACAATTCTATTGTCCC-GAA----A-------ACTCGAAACAAAGCAATGAGCATGTTAAATATTTTCAGGTATTCCGCGTGCCTGAAACGGCCACTGTTTTACTCAGGTAAATTC-CCTC
dp5 3:11581234-11581587 - CAACGGGCCAGTCCCGTCTGTGCACGTTCTTTGAGAACCTGGGATGGAAGGTAAGTGTTGTGGGGC-ATTC--------------CATT---------CGGGT-----------------------------------------------------------------------------------ATTC-GGGGGTACCATTAGGTAGAAAAGGCCTGCGAGG--------CTT------G---AGC-TTTGTTTTGGGCCA-CGGGCAGC--TGTAAGTAGTGCCCAATCCTGG---TGGGCCAATCAGCGGGCAGAAGGCAGTAACAGACTAAGAA---------------AGAACCCGCTT----------------------AGAATATCT--C--AAT--ATCTC-------------------TTTC----TTTCG-TACCTTCCTATTGCCCC-GCA----A-------ACTCGAAACAAAGCAATGAGCATGTTAAATATTTTCAGGTGTTCCGCGTGCCTGAAACGGCCACTGTGTTACTCAGGTAAATGC-TCTC
droPer2 scaffold_4:6980302-6980655 - CAACGGGCCAGTCCCGTCTGTGCACGTTCTTTGAGAACCTGGGATGGAAGGTAAGTGTTGTGGGGC-ATTC--------------CATT---------CGGGT-----------------------------------------------------------------------------------ATTC-GGGGGTACCATTAGGTAGAAAAGGCCTGCGAGG--------CTT------G---AGC-TTTGTTTTGGGCCA-CGGGCAGC--TGTAAGTAGTGCCCAATCCTGG---TGGGCCAATCAGCGGGCAGAAGGCAGTAACAGACTAAGAA---------------AGAACCCGCTT----------------------AGAATATCT--C--AAT--ATCTC-------------------TTTC----TTTCG-TACCTTCCTATTGCCCC-GCA----A-------ACTCGAAACAAAGCAATGAGCATGTTAAATATTTTCAGGTGTTCCGCGTGCCTGAAACGGCCACTGTGTTACTCAGGTAAATGC-TCTC
droWil2 scf2_1100000004954:3380830-3380926 + C------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTC-GAA----AATTCGAA---CGAAACAAAGCAATGAGCATGTTAAATATTTTCAGGTTTTCCGCGTGCCTGAAACGGCCACTGTATTACTCAGGTAAATGC-----
droVir3 scaffold_12875:19948454-19948541 + -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A-------ACTCGAAACAAAGCAATGAGCATGTTAAATATTTTCAGGTATTCCGCGTGCCTGAAACGGCCACTGTACTACTCAGGTAAATGC--CTT
droMoj3 scaffold_6496:6247988-6248073 - C------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAAACAAAGCAATGAGCATGTTAAATATTTTCAGGTATTCCGCGTGCCTGAAACGGCGACAGTTCTACTCAGGTAAATGCATCAA
droGri2 scaffold_15245:11589763-11589873 - A------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T--------------------------TTCC----CCCAC---------------------A-AACAACTCGAATCTCGAAACAAAGCAATGAGCATGTTCAATATTTTCAGGTGTTCCGCGTGCCTGAAACGGCCACTGTACTACTCAGGTAAATGC-CTTA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droAna3
CGACCGGCCAGTCCCGTCTGTGCACCTTTTTCGAGAACCTTGGATGGAAGGTGAGTGTCGCGGGTG-TTGCAAG-TTT----GTTT--T-------TTGGGGT-----------------T---AATGAT---------------------------------------AATAGG----------------------------------------------------ATAGACTAAGGCTA-----------------------AGGGCAGCTTCGTAAGTAGTGCCC----CCAA---TGGG-----------------------------------ATAGGGAATGGGAATGGGAATGGGAGGT---------------GATGCGGGTTCATTTTTTTGGTT--ACAACTCCTGATACAGAATGATAC---T----CTTGT-TAAATTCTTATTGCCCCCGAA----A-------ACTCGAAACAAAGCAATGAGCATGTTAAATATTTTCAGGTATTCCGCGTGCCTGAAACGGCCACTGTTTTACTCAGGTAAATGC-TCTCSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
........................................TGGATGGAAGGTGAGTGTCGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.002000002
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATTCCGCGTGCCTGAAACGGC............................2311.001010000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATTCTTATTGCCCCCGA......................................................................................................1911.001001000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCCGCGTGCCTGAAACGGCC...........................2211.001010000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGAAACGGCCACTGTTTTACTCAG.............2511.001000001
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAAACGGCCACTGTTTTA..................1911.001100000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCACTGTTTTACTCAGGTAA.........2011.001100000
.......................................................................................................................................................................................................................................................................................................A---TGGG-----------------------------------ATAGGGAATGGGAATGGG..................................................................................................................................................................................................................2311.001000010
...........................................ATGGAAGGTGAGTGTCGCGGG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAAACGGCCACTGTTTTACTCAGT............2511.001100000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCCGCGTGCCTGAAAC...............................1811.001001000
...........................................................................................................................................................................................................................................................................................................TGGG-----------------------------------ATAGGGAATGGGAATGG...................................................................................................................................................................................................................2111.001100000
...............................................AAGGTGAGTGTCGCGGGTG-TT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000001
.......................................................................................................................................................................................................................................................................................................A---TGGG-----------------------------------ATAGGGAATGGGAATGGT..................................................................................................................................................................................................................2311.001000001
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGCCACTGTTTTACTCAG.............1911.001000001
............................TTTCGAGAACCTTGGATGGAAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001010000
....................................................................................................................................................................................................................................................................................................................................................AGGGAATGGGAATGGGAATGG.............................................................................................................................................................................................................2140.753011010
.......................................................................................................................................................................................................................................................................................................................................................GAATGGGAATGGGAATGGGA...........................................................................................................................................................................................................20200.65132000110
....................................................................................................................................................................................................................................................................................................................................................AGGGAATGGGAATGGGAATGGGA...........................................................................................................................................................................................................2340.502000002
....................................................................................................................................................................................................................................................................................................................................................AGGGAATGGGAATGGGAATGGG............................................................................................................................................................................................................2240.251010000
.......................................................................................................................................................................................................................................................................................................................................................GAATGGGAATGGGAATGGG............................................................................................................................................................................................................19200.255010004
.......................................................................................................................................................................................................................................................................................................................................................GAATGGGAATGGGAATGG.............................................................................................................................................................................................................18200.204000040
....................................................................................................................................................................................................................................................................................................................................................AGGGAATGGGAATGGGAATG..............................................................................................................................................................................................................2050.201100000
....................................................................................................................................................................................................................................................................................................................................................AGGGAATGGGAATGGGAAT...............................................................................................................................................................................................................1980.131010000
.....................................................................................................................................................................................................................................................................................................................................................GGGAATGGGAATGGGAATG..............................................................................................................................................................................................................19200.102000020
.....................................................................................................................................................................................................................................................................................................................................................GGGAATGGGAATGGGAATGG.............................................................................................................................................................................................................20200.051000010
......................................................................................................................................................................................................................................................................................................................................................GGAATGGGAATGGGAATGG.............................................................................................................................................................................................................19200.051100000
droBip1
CGACTGGCCAGTCCCGCCTGTGCACCTTCTTCGAGAACCTTGGATGGAAGGTGAGTGTCGGGGGTG-TTGCA--------------A-------------------------------------------------------------------------------------GGGG--AT--------------------------------------GCTAGG---ATAGACTAAGGCTAAG---GCGATTGCTTCGGGATGGGGGGCAGCTCCGTAAGTAGTGCCC----CTGA---TGGGTGA--CGGCGG------------------------A---------------GGAGTGGGAGCA---------------GAAGCGGGTTCACTTTTT--CTT--A----------------------C------------------TTCTTATTGCCCC-CGA----A-------ACTCGAAACAAAGCAATGAGCATGTTAAATATTTTCAGGTATTCCGCGTGCCTGAAACGGCCACTGTTTTACTCAGGTAAATGC-TCTCSizeHit CountTotal NormTotal
No Reads
droKik1
CGACGGGCCAGTCCCGATTGTGCACCTTCTTCGAGAACCTTGGATGGAAGGTGAGTGTCGTGGGG--AAGCA--------------AT------------GG-------------------------------------------GATGG-------------------GATGGGACCATGGGGGCATTTTGGGGGGATCCTGG--------------GGC--GATCCTAG-------------------------------------------TGTAAGTGGTGCCCAAGCAG--AGGCGGGCGA--CGGCG------------------------AA---------------AGAGGATGATGAGG---A---------GTAGCG---TCACCTTTA--GAGATA----------------------C-TCCCTCCTCTCTTAAAATTTCTATTGCCCCCTGA----A----A--AC-CGAAACAAAGCAATGAGCATGTTAAATATTTTCAGGTATTCCGCGTGCCTGAAACGGCCACTGTTTTACTCAGGTAAATGC-TCTCSizeHit CountTotal NormTotal
No Reads
droFic1
CGACGGGACAGTCCCGATTGTGCACCTTCTTCGAGAACCTTGGATGGAAGGTGAGTGTCGTGGGG--AATC--------------TGTTTGGCTTTATG-GGGAT------------------T---GG-------------------G-----------------G--GATGGGA--AT--------------------------------------GCC--GATCCTAGACTAAGGCAA-GTTAGCGAT--------ACCG-CGGGCAGCTCTGTAAGTAG-------------AGG---------------------------------------------------------AGAAAG---TGG---AGCCACGGCAGTAGCGGGATTACCTTTA--GAT--T----------------------C-CCC----CTCAT-TACCATTCTATTGCCCC-GAA----A-------ACTCGAAACAAAGCAATGAGCATGTTAAATATTTTCAGGTATTCCGCGTGCCTGAAACGGCCACTGTTTTACTCAGGTAAATTC-TCTCSizeHit CountTotal NormTotal
No Reads
droEle1
CGACTGGCCAGTCCCGCCTGTGCACCTTTTTTGAGAACCTTGGATGGAAGGTGAGTGTCGTGGGTG-TTTT-----------GTCG--T--------TGAGG-------------------------------------------GATGG-------------------GATGGGA--AT--------------------------------------GTC--GATCCTAGACTAAGGCAA-GATAGCGATTGCTTTGGGCCG-CGGGCTGCTCTGTAAGTAG-------------AGG---------------------------------------------------------AGAATG---TGA---GGCCGTGGCTGCAGCGGGATTACCTTTA--GAT--A----------------------C-TCC----CACTT-TACAATTCTATTGCCCC-GAA----A-------ACTCGAAACAAAGCAATGAGCATGTTAAATATTTTCAGGTATTCCGCGTGCCTGAAACGGCCACTGTTTTACTCAGGTAAATTC-TCTCSizeHit CountTotal NormTotal
No Reads
droRho1
CGACGGGCCAGTCCCGATTGTGCACCTTCTTTGAGAACCTTGGATGGAAGGTGAGTGTCGTGGGTG-TTTT--------------------------TGGG--------------------------------------------------------------------GATGGGA--AT--------------------------------------GTC--GATCCTAGACTAAGGCAA-GATAGCGATTGCTTTGGGCAG-CGGGCAGCTCTGTAAGTAG-------------AGG---------------------------------------------------------AGAAAG---TGA---AGCCATGGCTGCAGCGGGATTACCTTTA--GAT--A----------------------C-TCC----CACTT-TACATTTCTATTGCCCC-GAA----A-------ACTCGAAACAAAGCAATGAGCATGTTAAATATTTTCAGGTATTCCGCGTGCCTGAAACGGCCACTGTTTTACTCAGGTAAATTC-TTTCSizeHit CountTotal NormTotal
No Reads
droBia1
CGACGGGACAGTCCCGGTTGTGCACCTTCTTCGAGAACCTTGGATGGAAGGTGAGTGTCGTGGGTG-TTTC--------------TC----------TGGGG-------------------------------------------GATGAT-----AAATGGCGGGA-CGATGGGA--AT--------------------------------------GCC--GATCCTAGACTTAGGCAA-GTTAGCGATTGCTTTGGGCCG-CGGGCAGCTCTGTAAGTAG-------------AGG---------------------------------------------------------AGAACG---AAG---AGCCATGGCGGTAGCGGGATTACCTTTA--GAT--A----------------------CTCCC----CTCAT-TACAATTCTATTGTCCC-GAA----A-------ACTCGAAACAAAGCAATGAGCATGTTAAATATTTTCAGGTATTCCGCGTGCCTGAAACGGCCACTGTTTTACTCAGGTAAATTC-TCTCSizeHit CountTotal NormTotal
No Reads
droTak1
CGACGGGACAGTCCCGGTTGTGCACCTTCTTCGAGAACCTTGGATGGAAGGTGAGTGTCGTGGGTG-TTTTCAT-TTTGTTCG--T--T-------TTGGGG---------------------------------------------AGG-------------------GATGGGA--CT--------------------------------------GCCTAGATCCTAGACTTAGGCGA-ATTAGCGATTGCTTTGGGCCG-CGGGCAGCTCTGTAAGTAG-------------AAG---------------------------------------------------------AGAATGAAGAG----AGCCATGGCGGTAGCGGGATTACCTTTA--GAT--A----------------------C-TCC----CTCAT-TACAATTCTATTGTCCC-GAA----A-------ACTCGAAACAAAGCAATGAGCATGTTAAATATTTTCAGGTATTCCGCGTGCCTGAAACGGCCACTGTTTTACTCAGGTAAATTC-TCTCSizeHit CountTotal NormTotal
No Reads
droEug1
CGACAGGCCAGTCCCGTTTGTGCACCTTCTTTGAGAACCTTGGATGGAAGGTGAGTGTCGTGGGTGTATTGTATGTGTGTTTGTTT--T--------TGGGGGAAAAGGGAAGAAAAAGTTATT---GGG---------------------------------------AATGGGA--AT--------------------------------------GCC--GATCCTAGACTACGGCAA-GTTAGCTATTGCTTTGGGCCG-CGGGCAGCTCTGTAAGTAG-------------AGG---------------------------------------------------------AGAAA----TGATTGAGCCATGGCGATAGCGGGATTACCTTTA--GAT--A----------------------C-TCC----CTCAT-TACAATTCTATTGTCCC-GAAAAA-A-------ACTCGAAACAAAGCAATGAGCATGTTAAATATTTTCAGGTATTCCGCGTGCCTGAAACGGCCACTGTTTTACTCAGGTAAATTC-TCTCSizeHit CountTotal NormTotal
No Reads
dm3
CGACGGGACAGTCCCGCTTGTGCACTTTCTTCGAAAACCTTGGATGGAAGGTGAGTGTCGTGGGTGGATTC--------------TATT---------GGGGG------------------------------------------AATGGG-----AAATGG---GA--AATGGGT--AT--------------------------------------GCC--GATCCTAGACTAAGGCAA-GTTAGCGATTGCTTTGGGCCG-CGGGCCGCTCTGTAAGTAG-------------AGG---------------------------------------------------------AGGAAG---TGA---AGCCATGGCGATAGCGGGATTACCTTTA--GAT--ACGAT-------------------TCCC----CTCAT-TACAATTCTATTGTGCC-GAA----A-------ACTCGAAACAAAGCAATGAGCATGTTAAATATTTTCAGGTATTCCGCGTGCCTGAAACGGCCACTGTTTTACTCAGGTAAATTC-CCTCSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
..ACGGGACAGTCCCGCTTGTGCAC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23120.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020
..........GTCCCGCTTGTGCACTTTCTT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2119.0090000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCACTGTTTTACTCAGT............1817.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000600000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................T---------GGGGG------------------------------------------AATGGG-----AAATGG---G................................................................................................................................................................................................................................................................................................................................................................................................................1915.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000220000000
.......................................................................................................................................................................................................................................................................................................................................................................................ATGGCGATAGCGGGATTACCTTT........................................................................................................................................................................2313.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGGCCACTGTTTTACTCAGT............2213.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................T---------GGGGG------------------------------------------AATGGG-----AAATGG---GA--.............................................................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
.............................TTCGAAAACCTTGGATGGAAGGTAT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................GGGG------------------------------------------AATGGG-----AAATGG---GA--AATGGGT--....................................................................................................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000100000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGAGCATGTTAAATATTT.......................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAACAAAGCAATGAGCATG.................................................................2012.0020000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
..............CGCTTGTGCACTTTCTTCG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........GTCCCGCTTGTGCACTTTCTTCG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000
...........TCCCGCTTGTGCACTTTCTTCGAAAACC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAATGAGCATGTTAAATATTTT......................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000000000000000000000
.................................AAAACCTTGGATGGAAGGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAATGAGCATGTTAAATA..........................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000001000000
......GACAGTCCCGCTTGTGCACTTTCTTC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..................................................................................................................................................................................AT--------------------------------------GCC--GATCCTAGACTAAGGCAA-....................................................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGTATTCCGCGTGCCTGAA.................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAAGCAATGAGCATGTTAAATA..........................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAAACGGCCACTGTTTTACTCAGT............2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................CGGGCCGCTCTGTAAGTAG-------------AGG---------------------------------------------------------A.................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCCGCGTGCCTGAAACGGCCACT........................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTGAAACGGCCACTGTTTTACTCAGT............2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................CGAAAACCTTGGATGGAAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
..ACGGGACAGTCCCGCTTGTGCACTTTC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCGCGTGCCTGAAACGGCCACTGTT.....................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............CGCTTGTGCACTTTCTTCGAAAACCTTG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTATTCCGCGTGCCTGAAAC...............................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAATGAGCATGTTAAATATTTTCAG...................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTATTCCGCGTGCCTGA..................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCGCGTGCCTGAAACGG.............................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................CTTGGATGGAAGGTGAGTGTCGTGGGT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................TCCTAGACTAAGGCAA-GTTAG...............................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAATGAGCATGTTAAATATT........................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCGCGTGCCTGAAACGGCCACT........................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................GCTCTGTAAGTAG-------------AGG---------------------------------------------------------AGGAAG---TGA---...................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGCGTGCCTGAAACGGCCACTG.......................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................TGTGCACTTTCTTCGAAAACCTTGGATG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................CACTTTCTTCGAAAACCTTGGATGGAAGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................G-CGGGCCGCTCTGTAAGTAG-------------AGG---------------------------------------------------------AGG...............................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
.................................................................................................................................................................................................................................................................................CTGTAAGTAG-------------AGG---------------------------------------------------------AGGAAG---TG.......................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................ACTTTCTTCGAAAACCTTGGATGGAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................TTCGAAAACCTTGGATGGAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
..........................TTCTTCGAAAACCTTGGATGGAAGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................ATGG---GA--AATGGGT--AT--------------------------------------GCC--GAT....................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
......GACAGTCCCGCTTGTGCACTTT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................T---------GGGGG------------------------------------------AATGGG-----AAATGG---GC--.............................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAAGCAATGAGCATGTTA..............................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
..........................................................................................................................................................................................................................................................................................G-------------AGG---------------------------------------------------------AGGAAG---TGA---AGCCATGGC..........................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCGCGTGCCTGAAACGGCCACTGT......................2511.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........GTCCCGCTTGTGCACTTTCTTCGAAA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................AACCTTGGATGGAAGGTGAGTGT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........CAGTCCCGCTTGTGCACTTTCTTCGA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................GAAAACCTTGGATGGAAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
......GACAGTCCCGCTTGTGCACT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................CACTTTCTTCGAAAACCTTGGATGGAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................T---------GGGGG------------------------------------------AATGGG-----AAATGG---.................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
..................................................................................................................................................................................................................................................GTTAGCGATTGCTTTGGGCCG-..............................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCATGTTAAATATTTTCAG...................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................GTGAGTGTCGTGGGTGGATT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
...........................................ATGGAAGGTGAGTGTCGTGGG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
..........................TTCTTCGAAAACCTTGGATGGAAGTG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................TTCGAAAACCTTGGATGGAAGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............CCCGCTTGTGCACTTTCTTCGAAAACC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...CGGGACAGTCCCGCTTGTGCACT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCCGCGTGCCTGAAACG..............................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................TTTCTTCGAAAACCTTGGATGGAAGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................A-GTTAGCGATTGCTTTGGGCC................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCCGCGTGCCTGAAACGGCCACTG.......................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................AAAACCTTGGATGGAAGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAATGAGCATGTTAAATATTTTCA....................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................TCTGTAAGTAG-------------AGG---------------------------------------------------------AGGAA.............................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................CACTTTCTTCGAAAACCTTGGATGGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................C--GATCCTAGACTAAGGCAA-GT..................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................CATGGCGATAGCGGGATTACCTTTA--T....................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................AGG---------------------------------------------------------AGGAAG---TGA---AGCCATGGC..........................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................GGGGG------------------------------------------AATGGG-----AAATGG---GA--.............................................................................................................................................................................................................................................................................................................................................................................................................1921.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000000
.................................AAAACCTTGGATGGAAGGTATT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAAACGGCCACTGTTTTAC.................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................TT---------GGGGG------------------------------------------AATGGG-----AAATG.....................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
............................................................................................................................................................................GGGT--AT--------------------------------------GCC--GATCCTAGACTAA..........................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGTGCCTGAAACGGCCACTGTTTT...................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..........................TTCTTCGAAAACCTTGGAT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGAGCATGTTAAATATTTT......................................................2111.0010000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................GCACTTTCTTCGAAAACCTTGGATGGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................GATTC--------------TATT---------GGGGG------------------------------------------AATGGG-----AAATGG---.................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
..................................................................................................GGGGG------------------------------------------AATGGG-----AAATGG---G................................................................................................................................................................................................................................................................................................................................................................................................................1820.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGGCCACTGTTTTACTATC.............2140.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
CGACGGGACAGTCCCGCTTGTGCACTTTCTTCGAAAACCTTGGATGGAAGGTGAGTGTCGTGGGTG-ATTC--------------TATT---------GGGGGAA------------------T---GGG------------------------------------A--AATGGGT--AT--------------------------------------GCC--GATCCTAGACTAAGGCAA-GTTAGCGATTGCTTTGGGCCG-CGGGCAGCTCTGTAAGTAG-------------AGG---------------------------------------------------------AGGAAG---TGA---AGCCATGGCGATAGCGGGATTACCTTTA--GAT--ACGAT-------------------TCCC----CTCAT-TACAATTCTATTGTGCC-GAA----A-------ACTCGAAACAAAGCAATGAGCATGTTAAATATTTTCAGGTATTCCGCGTGCCTGAAACGGCCACTGTTTTACTCAGGTAAATTC-CCTCSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCCGCGTGCCTGAAACGGCCA..........................2312.00200020000000000000
..............CGCTTGTGCACTTTCTTCGAA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.00200001010000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAACGGCCACTGTTTTACTCAGT............2311.00100100000000000000
........................................TGGATGGAAGGTGAGTGTCG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000000001000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGCCACTGTTTTACTCAG.............1911.00110000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATTCCGCGTGCCTGAAACGGCCACT........................2711.00100010000000000000
......................................................................................ATT---------GGGGGAA------------------T---GGG------------------------------------A--AATGGG.......................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000000000001000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGGCCACTGTTTTACTCAG.............2111.00101000000000000000
..................................................................................................................................................................................................................................................GTTAGCGATTGCTTTGGGCCG-CGGGC.........................................................................................................................................................................................................................................................................................................2611.00100000000000100000
.......................ACTTTCTTCGAAAACCTTGGATG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100100000000000000
...........................................................................................................................................................................................................................................................................GCAGCTCTGTAAGTAG-------------AGG---------------------------------------------------------AGGAAG---.........................................................................................................................................................................................................2511.00100000000000100000
..............................................................................................................................................................................................................................................................................................................................................................................GA---AGCCATGGCGATAGCGGGAT...............................................................................................................................................................................2211.00100010000000000000
...............................................................................................................................................................................................................................................AA-GTTAGCGATTGCTTTGGGCCG-CGGGC.........................................................................................................................................................................................................................................................................................................2811.00101000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCCGCGTGCCTGA..................................1511.00100000000001000000
..................................................................................................GGGGGAA------------------T---GGG------------------------------------A--AATGGGT--A...................................................................................................................................................................................................................................................................................................................................................................................................2020.50100000000000001000
......................................................................................................GAA------------------T---GGG------------------------------------A--AATGGGT--AT--------------------------------------G...........................................................................................................................................................................................................................................................................................................................................................1820.50100000000001000000
.....................GCACTTTCTTCGAAA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1520.50100000010000000000
droSec2
CGACGGGACAGTCCCGCTTGTGCACTTTCTTCGAAAACCTTGGATGGAAGGTGAGTGTCGTGGGTG-ATTC--------------TATT---------GGGGGAA------------------T---GGG------------------------------------A--AATGGGT--AT--------------------------------------GCC--GATCCTAGACTAAGGCAA-GTTAGCGATTGCTTTGGGCCG-CGGGCAGCTCTGTAAGTAG-------------AGG---------------------------------------------------------AGGAAG---TGA---AGCCATGGCGATAGCGGGATTACCTTTA--GAT--ACGAT-------------------TCCC----CTCAT-TACAATTCTATTGTGCC-GAA----A-------ACTCGAAACAAAGCAATGAGCATGTTAAATATTTTCAGGTATTCCGCGTGCCTGAAACGGCCACTGTTTTACTCAGGTAAATTC-CCTCSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
....................TGCACTTTCTTCGAAAACCTTGGATG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0011000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATTCCGCGTGCCTGAAACGGCCACTGT......................2911.0010010
..................................................................................................GGGGGAA------------------T---GGG------------------------------------A--AATGGGT--A...................................................................................................................................................................................................................................................................................................................................................................................................2021.0020101
.......................................................................................TT---------GGGGGAA------------------T---GGG------------------------------------A--AATGGGT--A...................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100
..................................AAACCTTGGATGGAAGGTGAGTGT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010100
.......................................................................................TT---------GGGGGAA------------------T---GGG------------------------------------A--AATGGG.......................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100
.........................TTTCTTCGAAAACCTTGGATGGAAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010100
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATTCCGCGTGCCTGAAACGGCCACT........................2711.0010010
........................................................................................T---------GGGGGAA------------------T---GGG------------------------------------A--AATGGG.......................................................................................................................................................................................................................................................................................................................................................................................................1920.5011000
........................................................................................T---------GGGGGAA------------------T---GGG------------------------------------A--AATGGGT--....................................................................................................................................................................................................................................................................................................................................................................................................2020.5011000
...................................................................................................GGGGAA------------------T---GGG------------------------------------A--AATGGGT--....................................................................................................................................................................................................................................................................................................................................................................................................1830.3310100
........................................................................................T---------GGGGGAA------------------T---GGG------------------------------------A--AATGGGA--....................................................................................................................................................................................................................................................................................................................................................................................................2040.2510100
droYak3
CGACGGGACAGTCCCGCTTGTGTACCTTCTTCGAGAACCTTGGATGGAAGGTGAGTGTCGTGGGTG-ATTC--------------TATT-------TTGGGGA-----------------G---AATGTGAAATGGGAACTGGGGAATGGG-----TAATGG---GT--AATGGGA--AT--------------------------------------GCC--GGTCCTAGACTAAGGCAA-GTTAGCGATTGCTTTGGGCCT-CGGGCAGCTCTGTAAGTAG-------------AGG---------------------------------------------------------AGGAGGATAAGA---AGCCATGGCGATAGCGGGATTACCTTTA--GAT--A--AA-------------------TCCC----CTCAT-TACAATTCTATTGTCCC-GAA----A-------ACTCGAAACAAAGCAATGAGCATGTTAAATATTTTCAGGTATTCCGCGTGCCTGAAACGGCCACTGTTTTACTCAGGTAAATTC-CCTCSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
................................GAGAACCTTGGATGGAAGGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20110.0010000000100000
............................CTTCGAGAACCTTGGATGGAAGGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2418.00800100070000
......GACAGTCCCGCTTGTGTACCTTCTTCGA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2816.00600000000006
............................CTTCGAGAACCTTGGATGGAAGGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.00200200000000
...................................................................................................................................AATGGGAACTGGGGAATGGG-----TAATGG---GT--.............................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000010000
...........................................................................................................................................................................................................................................................................................................................................................................TAAGA---AGCCATGGCGATAGCGGGA................................................................................................................................................................................2411.00100000010000
......GACAGTCCCGCTTGTGTACCTT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00101000000000
....................................................................................................................................................GGG-----TAATGG---GT--AATGGGA--AT--------------------------------------............................................................................................................................................................................................................................................................................................................................................................2011.00101000000000
...............................................................................................................................................................................................................................................................................................................................................................................A---AGCCATGGCGATAGCGGGA................................................................................................................................................................................2011.00100000010000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTGAAACGGCCACTGTTTTACTCAG.............2611.00100100000000
............................CTTCGAGAACCTTGGATGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100000010000
..........................................................................................................................................................................................................................................................................................................................................................................ATAAGA---AGCCATGGCGATAGCGGGA................................................................................................................................................................................2511.00100000010000
...............................CGAGAACCTTGGATGGAAGGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000010000
...............................................................................................................................................................................................................................................AA-GTTAGCGATTGCTTTGGGCCT-..............................................................................................................................................................................................................................................................................................................2311.00100000010000
.............................................................................................................................................................................................................................................................................................................................................................................AGA---AGCCATGGCGATAGCGGGATT..............................................................................................................................................................................2411.00100000010000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATTCCGCGTGCCTGAAACGGCCACT........................2711.00100100000000
...............................CGAGAACCTTGGATGGAAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100000010000
.....................................................................................................................................................................GT--AATGGGA--AT--------------------------------------GCC--GGTCCTAGACTAAGG........................................................................................................................................................................................................................................................................................................................................2911.00100000010000
..........................................................................................................................................................................................................................................................................................................................................................................ATAAGA---AGCCATGGCGATAGCGGGAT...............................................................................................................................................................................2611.00100000010000
.....................................................................................................................................................GG-----TAATGG---GT--AATGGGA--AT--------------------------------------GCC--.......................................................................................................................................................................................................................................................................................................................................................2211.00100100000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCCGCGTGCCTGAAACGGC............................2111.00100100000000
........................................................................................................................................GAACTGGGGAATGGG-----TAATGG---GT--AATGG........................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000010000
...............................................................................................................................................................................................................................................AA-GTTAGCGATTGCTTTGGGCCT-C.............................................................................................................................................................................................................................................................................................................2411.00100100000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGCCACTGTTTTACTCAGT............2011.00100100000000
............................CTTCGAGAACCTTGGATGGAAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000010000
...........................TCTTCGAGAACCTTGGATGGAAGGTGAGT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.00100000010000
...............................................................................................................................GTGAAATGGGAACTGGGGAATGG................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100000010000
.........................................................................................................................................................................AATGGGA--AT--------------------------------------GCC--GGTCCTAGACTAAGGC.......................................................................................................................................................................................................................................................................................................................................2811.00100000010000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTATTCCGCGTGCCTGAAACGGCCA..........................2611.00100000010000
.......................................................................................................................................................................................................................................................................................................................................................................................ATGGCGATAGCGGGATTACCT..........................................................................................................................................................................2111.00100000010000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAACGGCCACTGTTTTACTCAGT............2411.00110000000000
..........................................................................................................................................................................................................................................................................................................................................................................ATAAGA---AGCCATGGCGATAGCGGG.................................................................................................................................................................................2411.00100000010000
................................GAGAACCTTGGATGGAAGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100000010000
.........................................................................................................................................................................................................................................................................................................................................................................GATAAGA---AGCCATGGCGATAGCG...................................................................................................................................................................................2311.00100000010000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCCGCGTGCCTGAAACGGCC...........................2211.00100000010000
............................................................................................................................................................................................................................................................................................................................................................................AAGA---AGCCATGGCGATAGCGGGA................................................................................................................................................................................2311.00100000010000
..............................TCGAGAACCTTGGATGGAAGGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000010000
droEre2
CGACGGGACAGTCCCGCCTGTGCACCTTCTTCGAGAACCTTGGATGGAAGGTGAGTGTCGTGGGTG-ATTC--------------TATT---------GGGTG---------------------AATGGGA-ATGGGAAC-GGGGAATGGGAATGGGAATGG---GAATGATGGGA--AT--------------------------------------GCC--GATCCTAGACTAAGGCAA-GGTAGCGATTGCTTTGGGCCG-CGGGCAGCTCTGTAAGTAG-------------AGG---------------------------------------------------------AGGATG---AGA---AGCCATGGCGATAGCGGGATTACCTTTA--GAT--A----------------------CTCCC----CTCAT-TACAATTCTATTGTCCC-GAA----A-------ACTCGAAACAAAGCAATGAGCATGTTAAATATTTTCAGGTATTCCGCGTGCCTGAAACGGCCACTGTTTTACTCAGGTAAATTC-CCTCSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
............................CTTCGAGAACCTTGGATGGAAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010001000
..............................TCGAGAACCTTGGATGGAAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000010
............................CTTCGAGAACCTTGGATGGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000010
........................................................................................................................................................................................................................................................................................................AGG---------------------------------------------------------AGGATG---AGA---AGCCATGGC..........................................................................................................................................................................................2111.0010001000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATTCCGCGTGCCTGAAACGGCCACTG.......................2711.0011000000
....GGGACAGTCCCGCCTGTGCAC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000
.......................................................................................TT---------GGGTG---------------------AATGGGA-ATGGGA............................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000100
......GACAGTCCCGCCTGTGCACCTTCTTCGA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010100000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGTATTCCGCGTGCCTGAAACGGCCA..........................2711.0011000000
.....................................................................................................................................................................................................................................................................................AAGTAG-------------AGG---------------------------------------------------------AGGATG---AGA---...................................................................................................................................................................................................1811.0010000100
...........................TCTTCGAGAACCTTGGATGGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0011000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCCTGAAACGGCCACTGTTTTAC.................2411.0011000000
............................CTTCGAGAACCTTGGATGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000010
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAATGAGCATGTTAAATATTT.......................................................2311.0010000010
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATTCCGCGTGCCTGAAACG..............................2111.0010000010
..........................................................................................................................................AC-GGGGAATGGGAATGCT.........................................................................................................................................................................................................................................................................................................................................................................................................................18120.0810000100
dp5
CAACGGGCCAGTCCCGTCTGTGCACGTTCTTTGAGAACCTGGGATGGAAGGTAAGTGTTGTGGGGC-ATTC--------------CATT---------CGGGT-----------------------------------------------------------------------------------ATTC-GGGGGTACCATTAGGTAGAAAAGGCCTGCGAGG--------CTT------G---AGC-TTTGTTTTGGGCCA-CGGGCAGC--TGTAAGTAGTGCCCAATCCTGG---TGGGCCAATCAGCGGGCAGAAGGCAGTAACAGACTAAGAA---------------AGAACCCGCTT----------------------AGAATATCT--C--AAT--ATCTC-------------------TTTC----TTTCG-TACCTTCCTATTGCCCC-GCA----A-------ACTCGAAACAAAGCAATGAGCATGTTAAATATTTTCAGGTGTTCCGCGTGCCTGAAACGGCCACTGTGTTACTCAGGTAAATGC-TCTCSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCCGCGTGCCTGAAACGGCCACT........................2511.0010100000000
.............CCGTCTGTGCACGTTCTTTGA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
..................................................................................................................................................................................................................................................................................................................................................................................................................AT--ATCTC-------------------TTTC----TTTCG-TACCTTCCT.................................................................................................................2511.0010001000000
.........................................................................................................................................................................................................................................TT------G---AGC-TTTGTTTTGGGCCA-CGGG..........................................................................................................................................................................................................................................................................................................2411.0010100000000
....GGGCCAGTCCCGTCTGTGCA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCCTGAAACGGCCACTGTG.....................2011.0010100000000
...............................TGAGAACCTGGGATGGAAGGTGTT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010100000000
............................................................................................................................................................................................................................GAGG--------CTT------G---AGC-TTTGTTTTGGGC.................................................................................................................................................................................................................................................................................................................2311.0010100000000
................................GAGAACCTGGGATGGAAGGTGTT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000001000
................................GAGAACCTGGGATGGAAGGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000010
............................................................................................................................................................................................................................GAGG--------CTT------G---AGC-TTTGTTTTGGG..................................................................................................................................................................................................................................................................................................................2211.0010000100000
...............................TGAGAACCTGGGATGGAAGGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000010
.....GGCCAGTCCCGTCTGTGCACGTTCTTTGA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010010000000
...............................TGAGAACCTGGGATGGAAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000001000
droPer2
CAACGGGCCAGTCCCGTCTGTGCACGTTCTTTGAGAACCTGGGATGGAAGGTAAGTGTTGTGGGGC-ATTC--------------CATT---------CGGGT-----------------------------------------------------------------------------------ATTC-GGGGGTACCATTAGGTAGAAAAGGCCTGCGAGG--------CTT------G---AGC-TTTGTTTTGGGCCA-CGGGCAGC--TGTAAGTAGTGCCCAATCCTGG---TGGGCCAATCAGCGGGCAGAAGGCAGTAACAGACTAAGAA---------------AGAACCCGCTT----------------------AGAATATCT--C--AAT--ATCTC-------------------TTTC----TTTCG-TACCTTCCTATTGCCCC-GCA----A-------ACTCGAAACAAAGCAATGAGCATGTTAAATATTTTCAGGTGTTCCGCGTGCCTGAAACGGCCACTGTGTTACTCAGGTAAATGC-TCTCSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAACGGCCACTGTGTTACTCAGT............2412.002200000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGAAACGGCCACTGTGTTACTCAGT............2612.002200000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAACGGCCACTGTGTTACT................1912.002200000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAACGGCCACTGTGTTACTCAGG............2411.001100000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCCGCGTGCCTGAAACGGCCACT........................2511.001001000
............................................................................................................................................................................................................................................................................................................GGGCCAATCAGCGGGCAGAAGGC...................................................................................................................................................................................................................................................2311.001001000
............................CTTTGAGAACCTGGGATGGAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000001
............................................................................................................................................................................................................GGTAGAAAAGGCCTGCGAGG--------CTT------G---AGC-T............................................................................................................................................................................................................................................................................................................................2811.001000001
................................GAGAACCTGGGATGGAAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000100
...........................TCTTTGAGAACCTGGGATGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001001000
............................CTTTGAGAACCTGGGATGGAAGGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001001000
...........TCCCGTCTGTGCACGTTCTTTGAGAACCT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.001000001
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTTCCGCGTGCCTGAAACGGCCACT........................2711.001001000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGAAACGGCCACTGTGTTACTCAGG............2611.001100000
..................TGTGCACGTTCTTTGAGAACCTGGGAT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000001
droWil2
C------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTC-GAA----AATTCGAA---CGAAACAAAGCAATGAGCATGTTAAATATTTTCAGGTTTTCCGCGTGCCTGAAACGGCCACTGTATTACTCAGGTAAATGC-----SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTCCGCGTGCCTGAAACGGC............................2111.00100010
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTCCGCGTGCCTGAAACGGCCACT........................2511.00101000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCCTGAAACGGCCACTGTATTACTCAG.............2811.00101000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAATGAGCATGTTAAATATTTTCAG...................................................2711.00100010
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGTTTTCCGCGTGCCTGAAACGGC............................2511.00100010
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGGCCACTGTATTACTCAG.............2111.00110000
droVir3
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A-------ACTCGAAACAAAGCAATGAGCATGTTAAATATTTTCAGGTATTCCGCGTGCCTGAAACGGCCACTGTACTACTCAGGTAAATGC--CTTSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCACTGTACTACTCAG.............1711.001000000000000000000000000000000000000000000000000000000001000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGCAATGAGCATGTTAAATATTTTCAG...................................................2811.001000000000000000000000000001000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTATTCCGCGTGCCTGAAA................................2011.001001000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGGCCACTGTACTACTCAGG............2111.001010000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGAGCATGTTAAATATTT.......................................................2011.001001000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGGCCACTGTACTACTCAGC............2211.001010000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCCTGAAACGGCCACTGTACTACTC...............2611.001100000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAATGAGCATGTTAAATATTT.......................................................2211.001001000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCACTGTACTACTCAGC............1811.001001000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCCGCGTGCCTGAAACGGCC...........................2211.001000100000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCCGCGTGCCTGAAACGGCCACT........................2411.001000000000000000000000000000000001000000000000000000000000000000
droMoj3
C------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAAACAAAGCAATGAGCATGTTAAATATTTTCAGGTATTCCGCGTGCCTGAAACGGCGACAGTTCTACTCAGGTAAATGCATCAASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGACAGTTCTACTCAGGT...........1811.001010000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAATGAGCATGTTAAATATTTTCA....................................................2511.001000010
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCCGCGTGCCTGAAACGGCGACAGT......................2711.001000001
droGri2
A------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T--------------------------TTCC----CCCAC---------------------A-AACAACTCGAATCTCGAAACAAAGCAATGAGCATGTTCAATATTTTCAGGTGTTCCGCGTGCCTGAAACGGCCACTGTACTACTCAGGTAAATGC-CTTASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
A------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T--------------------------TTCC----CCCAC---------------------A-AACAACT.............................................................................................1911.00110

Generated: 05/18/2015 at 02:54 AM