ID:

dan_1679

 Coordinate:

scaffold_13266:201915-202065 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

Flybase annnotation

CDS [Dana\GF12470-cds]; exon [dana_GLEANR_12473:6]; intron [Dana\GF12470-in]

No Repeatable elements found

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
GTTATATAAACTTACAATTTATTTTTAAAGACTAAAACATAAATATAAAACAACAAATAACTTTTATAATTTAAAAGTGAATATTTTTTAAACAATATTTCAATTGAAAACTCAACAAAAAAAGACAAACAAAAGGCAATAGATTTCTATAAAGAACTTTTAAAAAATGTCCATATTGTCCCTTCCACATCCCTTGTTCAGCTCATGGATCAGCACATCAAGGACCAGCATGCCCAGATGCAGAAGATGCA
**************************************************.(((((...(((((((.....)))))))(((((((........)))))))...((((....))))...................((((((((((((((....))))............)))..))))))).............)))))...************************************************** 		Read size # Mismatch Hit Count Total Norm Total M058
embryo
 M044
female body
 V039
embryo
 V055
head
..........................................................................................................................................................................................AGGTCCCTTGTTCGGCTCATGG........................................... 22 3 1 1.00 1 0 1 0 0
.....................................................................................................................................................................................................................................ATGCCCAGATGCAGAAGATGC. 21 0 1 1.00 1 0 0 1 0
.............................................................................................................................................................................................TCCCTTGTTCGGCTCATGG........................................... 19 1 1 1.00 1 0 1 0 0
................................................................................................................................................................................................................ATCAGCACATCAAGGACCAGCATGCCC................ 27 0 1 1.00 1 1 0 0 0
........................................AAATAGAAAACTACAAATAAC.............................................................................................................................................................................................. 21 2 4 0.25 1 1 0 0 0
.......................................................................................................................................................................................................AGCTTCTTGATCAGCACATCA............................... 21 3 4 0.25 1 0 0 0 1
.................................................................................................................AACAAAAAAAGACAAACC........................................................................................................................ 18 1 5 0.20 1 1 0 0 0
.................................................................................................................AACAAAACAAGACAAACAAA...................................................................................................................... 20 1 5 0.20 1 1 0 0 0
................................................................................................................CAACCAAAAAAGACAAACCAAAT.................................................................................................................... 23 3 8 0.13 1 1 0 0 0
.....................................................................................................................AAAAAAGACAAACAAGAGAC.................................................................................................................. 20 2 11 0.09 1 1 0 0 0
.............................................................................................................................................................................................................TGGATCAGCACGCCACGGAC.......................... 20 3 13 0.08 1 0 1 0 0
........................................................................................................................................................................................................................ATCTAGGACAACCATGCCC................ 19 3 13 0.08 1 0 0 1 0
............................................................................................................................ACAAACAAAAGGCGATAAA............................................................................................................ 19 2 20 0.05 1 0 0 0 1
....................................................................................................................AAAAAAAGACAAACCAAA..................................................................................................................... 18 1 20 0.05 1 1 0 0 0
......................................................................................................................AAAAAGACAAACAAAAGGAC................................................................................................................. 20 2 20 0.05 1 1 0 0 0
.....................................................................................................................GAAAAAGACAACCAAAAGGCG................................................................................................................. 21 3 20 0.05 1 1 0 0 0
.......................................................................................................................ACAAGACAAACAAAAGGGAAC............................................................................................................... 21 3 20 0.05 1 1 0 0 0
..................................................................................................................AAAAAAAAAGACAAACAA....................................................................................................................... 18 1 20 0.05 1 1 0 0 0

Anti-sense strand reads

CAATATATTTGAATGTTAAATAAAAATTTCTGATTTTGTATTTATATTTTGTTGTTTATTGAAAATATTAAATTTTCACTTATAAAAAATTTGTTATAAAGTTAACTTTTGAGTTGTTTTTTTCTGTTTGTTTTCCGTTATCTAAAGATATTTCTTGAAAATTTTTTACAGGTATAACAGGGAAGGTGTAGGGAACAAGTCGAGTACCTAGTCGTGTAGTTCCTGGTCGTACGGGTCTACGTCTTCTACGT
**************************************************.(((((...(((((((.....)))))))(((((((........)))))))...((((....))))...................((((((((((((((....))))............)))..))))))).............)))))...************************************************** 		Read size # Mismatch Hit Count Total Norm Total V055
head
 M044
female body
 V105
male body		 M058
embryo
 V106
head
..............................................................................................................................................................................TAACAGGGAAGGTCGAGGGA......................................................... 20 2 1 1.00 1 1 0 0 0 0
.............................................................................................................................................................................................AGGGAACAAGTCGAGTACCTAGTCGT.................................... 26 0 1 1.00 1 0 1 0 0 0
.............................................................................................................................................................................ATAACAGGGAAGGGGTA............................................................. 17 1 3 0.33 1 1 0 0 0 0
...................................................................................................................................................................................................CGAGTCGAGTACCCAGTC...................................... 18 2 5 0.20 1 0 0 1 0 0
.....................................................................................................................................................................................................AGTCGAGTACCCAGTCTGG................................... 19 3 12 0.08 1 0 0 1 0 0
.............................................................................................................TGACTTGTCTTTCTCTGTTTG......................................................................................................................... 21 3 20 0.05 1 0 0 1 0 0
........................................ATTATTTTCTGTTGTTTATTGA............................................................................................................................................................................................. 22 3 20 0.05 1 0 0 0 1 0
....ATGTTGGAATGTTAATTAAAA.................................................................................................................................................................................................................................. 21 3 20 0.05 1 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droAna3 scaffold_13266:201865-202115 - dan_1679 GTTATATAA-A----CTTACAATTTATTTTTAAAGACTAAAACATAAATATAAAAC--------------------------------------------------------------------------------------------------------------------------A----------------------------------------------------------------------------------------------ACAAATAACTTTTATAATTT---------AAAAGTGAA--------TA----------------T----------------TTTTT-----------------------------------AAACAATAT-----------------------------------------------------------------------------TTCAATTGAAAACTCAACAAAAAAAGACAAACAAAAGGCAATAGATTTC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATA-------------AAGAACTTTTAAAAAATGT--------------------------------------------------------------------------------------------------CCATATTGTCC---CTTCCACATCCCTTGTTCAGCTCATGGATC---------------------------AGCACATCAAG----------------GACCAGCATGCCCAGATGC----AGAAGATGCA
droBip1 scf7180000396730:1223343-1223542 - ATTATATTA------ACTT--------------------------------------------------TAAAG-----------------------------A----------------------------------------------------------------------------------------------------------------------------------------TATTTTTTAAAACTTC-------------------------------------CTACAGACTT----------------------------------------------------------------------------------------------CAACTT-----------------------------------------------------------------------------TTCAATTGAAAACCCAACAACAAAAGACCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TC-------------------TATAATTTGTCATAAAAAAGAACTTTTATAAAATAT--------------------------------------------------------------------------------------------------CCATGTTGTCC---CTTCCTAATCCCTTGCTTAGCTCATGGATC---------------------------AGCACATCAAG----------------GACCAACATGCCCAGATGC----AGAAGATGCA
droKik1 scf7180000302476:808020-808207 + AAATACACTTACACA-------------------------------------------GTTCTAAA-------------------------------------------------------------------------------------------------------------------------------------------------TGTTACA----GCTCTTTTAAAACCAATAT---------------TGGAT-------------------------------------------------------------TCAATTGATACATTTT----------------AG-T-AAAACAAGAAATCCTTTAATTAATAAGATAATTCCTA--------------------------------ACAATTCCCCATGTTCC---------------------------------TGA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGTGCAGCTTATGGACC---------------------------AACACATCAAG----------------GACCAGCATGCCCAGATGC----AAAAGATGCA
droFic1 scf7180000453665:11962-12144 + GCAAAATCG------ATTC--------------------------------------------------AA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGTATTTTTATACGTGAAAATACGTCCAAATAC----GGTTGTTTAAAACGCTGTATCTCCGTTAGTTTG---------ACTTTAATTGAC-----------------TCAAAATTTTT-----------------------------------ACAAAATGT-----------------------------------------------------------------------------TCT-----------------------------------------------------------------CGATAT-ATTGGTCA-----------------------------------------------------------------------------------------------TTCAGAAAAA------AATAAAAA---AAAATA------------------------------------GTAAAAA-------------------ATTTTTT---------------------------------------------------------------------------------------------------------------------------------------------------------AAAAACCT------------------------------------------------------------------------------------------TGTAAAA
droEle1 scf7180000491338:246427-246739 + GTAATACAA------TTCC-------------------------------------AATTTAATTACTTTAAGCTTACTTAGCAGAACATATTTATATTTAAAAAATTTCTATAAACTATTTCTATAAACTATATTTTTAAAGCAAATCTATGACCATTAAAACCTTAAATAAAATATATCAATTAGAGTTCCTTTTAATTTACTTCTTTAAGGTATG----GCTAT-------TTAATAT---------------CTGAT-------------------------------------------------------------TTATTTGAAATATTTT----------------TT--------------------------------------------------------------------------------------TTT---------------------------------TTAACGTGTAGGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCCGCATCC----------------------------------------------------------------------------------------GTG------GAG-CGCTAT--TC-AGGCCA---------------------------GGATGCGGACGATGAT------------GTTGACGTTGATGTGGTCGACTGCAGTGAC--T--C----GGAAATGCCG
droRho1 scf7180000779985:553337-553592 - ATAGTAATAAACA--------------------------------------------------------TA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATATTTTAATATAAG-------------------------------------CTACAAAATG---TATT---------ATTTCAATTAACTTAATATTTT-TGAAAATATTTATT-----------------------TATTTCCAGAATATCAAAGACTAT-----------------------------------------------------------------------------TGCGGGTAAAGCCTGAATTTTGATTGTTTT--CCAAGGCGGTGCGATTAAAGGACGACAAAATTGTGCGGC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAAAAAAAGT----------------------------------------------------------------------------------------------GCA----GGCTCAC---GCTCAAGGGC------------AA---------------------------CTGGAGCAGTTTGAGC------------AGCAG-CAACAGCAGCAGCAGCAGC----AGCAGCAGCA
droBia1 scf7180000302422:7891045-7891135 + AAACGATAA------A-------------------------AGAGACACAGAAAAT--------------------------------------------------------------------------------------------------------------------------A----------------------------------------------------------------------------------------------ATACAAAGTATATG-----------------TAATTAAAAAATTGGTA----------------TTTT-TAAAAATGAATATC-------------------------------------------------------TTAAGTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACATTTTAA
droTak1 scf7180000415785:76901-77159 + ATTATATGT------A-------------------------CG---------------TGTTGAGA-------------------------------------------------------------------------------------------------------------------------------------------------ACAAAAA----CCATATTTTAAATTACAAA---------------TAAAATCAATTG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGAGCAAGAA-----------------------------------------------------------------------------------CAGAATAACCACTGCAAAAATACCTTTTAAACACAAA---------------TACGATATTTTAAAAAAATATATAAATTCAAACAAAAGCTGTAATAAGAA---AGTATAAACAATATTTAAA-------------ATAACAATACATTTAAATAAAATCAACCCACT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGGACGTCGGAC---------------------------AAATGCTGCAA----------------TATCAGCAACCGCAACAGC----AACAACAGCA
droEug1 scf7180000409711:2030656-2030883 - ACACAAATTTAATCAATTTATGTTTGAAAGGAGCAAA----AAATAAGTAAAACAG--------------------------------------------------------------------------------------------------------------------------GACAAATAA------------------------------------------------------------------------------------------AATTCCTTTTAAAGCTCTTTAGCCCCCAGACGAAAATC---------AATT---------C----------------TTTTT-----------------------------------TGGGAACGT-----------------------------------------------------------------------------TCCAGCCGGAAAGAAAATAAAAAAAGTCAT--CCATGGAAATGCG---------------------------------------------------------------------------------------------------AAACGAGCTGGGAAACA----------------------------------------------------------------------------------------AAAAA-------------------TATTA-T---------------------------------------------------------------------------------------------------------------------------------------------------------TCCGGCCTAG--------------------------------------------------------------GACGAGCCAAAAGAGCAAA----CACAACTGCA
dm3 chrX:21423249-21423398 - GTGGAAGTG------A-----------------------------AATACGAAACAAAAATATTAAGTCCAAAG-----------------------------G--------------------------------------------------------------------------C--AACTAAGTT---------------------TT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAACCAACATATAAAAATAAAAAATTAAAACAA---TATAGAATTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAATAATAC---AACACAAA-AATTTACAAA-------------A------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAAAAAAACAAACAAG----TGAAACTAGA
droSim2 3r:20053977-20054192 + TTGTATAGA------ATCAACGTTTGCAGCTAAAAACCAAAACGAAAACCGAAACTAATAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GATAATTTTACAGGTT---------TAAGGCGGCAATGTTCATTT----------------TT-TAAGGAATAACGATA-------------------------------------------------------TTAAGATATCATA--------------------------A------------TTAAC-ATAACAAAT--AGCAACTAAAAACCAAGCAAAAAAAGAAAAAC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAAAAAA-------------------TATTTTT---------------------------------------------------------------------------------------------------------------------------------------------------------TATAATTTCGC-----------------------------------------------------------------------AGCACTTTCACATGATACCCGCA
droSec2 scaffold_0:17969495-17969620 - ATTCAACAG------CAAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAGAAAAAGCAATCCATTTT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGA-------------------------------GCACCAC--TC----------------------------------------------------------------------------------------GCA----TGC---CCCTGC---TCCAACTATGATGCAGCCA---------------------------ATCCA------------GCAGCAACTGCAGCAG-CACTTGCAGCAACATCAGC----AGATGCAGCA
droYak3 3L:3465804-3465935 + ATTCCCAGT------G-------------------------TA---------------TTTT----------------------------------------------------------------------------------------------------------------------------TCTA---------------------GT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAAC-----------------------------------------------------------------------------TAAAGTAAAAATATAAAAAAAAAAACTCAA--CCAAAATCATTTC---------------------------------------------------------------------------------------------------AAACAAAATGCAATAATTCAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T---------------------------AATAATTCAAA----------------ACTCGAAAAAAATAAAAAA----ACAAAAAACA
droEre2 scaffold_4820:7521511-7521727 - TTGTATAGA------ATCAACGTTTGCAGCTAAAAACCAAAACGAAAACCGAAACTAATAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GATAATTTTACAGGTT---------TAAGGCGGAAATGTTCATTT----------------TTTTAAGGAATAACGATA-------------------------------------------------------TTAAGATATCATA--------------------------A------------TTAAC-ATAACAAAT--AGTAACTAAAAACCAAGCAAAAAAAGAAAAAC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAAAAAA-------------------TATTTTT---------------------------------------------------------------------------------------------------------------------------------------------------------TATAATTTCGC-----------------------------------------------------------------------AGCACTTTCACATGATACCCGCA
dp5 XR_group8:1668369-1668626 + TTGTAAGAG------TTTA--------------------------------------------------AA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTAATTCA---------------ATTAACAGC----AG--GCGCAGCAGAA-----------GTAACAACAATGCCTATGC----------------CTCTGAGAAATTGAAACA-------------------------------------------------------AAAAAATATAGTGTAAATC------GTATAAACTAAATT-TAACAACAAAAATCAAGCAA-------------ATTGTGATCTCAGCAATGAG------------------------AATGGACTATCAAATGCCCCCGCCAGCATTGGCCCTGCAACAGCAACAACAGCAGCAGC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCATGGCC------------TGCAA-CACCAACAGAATCAGCTGC----AGTTGTTGCA
droPer2 scaffold_25:771613-771731 + TAACCAATGTACC--------------------------------------------------------AG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAAGTCATCAAAAA-A----------------------------------------------------AA---------AATATA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAACTTCGA-------------------------------AATTCTG--ACAGA------------------------------------------------------------------------------------TGCTGCCATGTTTTCC---CTTTCAGATTGCTATCACTGCGA-----------------------------------------------------------------------GCCACTTGC----AGCTGCTGCG
droWil2 scf2_1100000004968:2067454-2067646 + CTTATGCAA------A-------------------------TG---------------GCTCCAAC-------------------------------------------------------------------------------------------------------------------------------------------------AAAAAACTTCCGTTTTT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCCATGCAAGCATCGACATATTTTC-AAAAAAAAAAAAAAAACACTACAGCTTACACTCTTTTCATTGTTAAATAAAGTTGGTCAAAGTGAAATAAGTCAA-------------TTTAAGACAA------AAAAAAAA---AAAATAAATAAAATTTAAT----------------------------------------------------TTTG---------------------------------------------------------------------------------------------------------------------------------------------------------TGGAAAGT------------------------------------------------------------------------------------------TAAAAAA
droVir3 scaffold_12970:10095798-10096060 - TATAAACAT------A-------------------------TAATATATACAAAAG--------------------------------------------------------------------------------------------------------------------------T----------------------------------------------------------------------------------------------AAATAACATATATA--------------------------------CAC----------------CACAAATATTATACATAT-------------------------------------------------------ATACAAGATTATATAAATCTA---TATACAAGCTATATTTTTAATACAAAAATTAAT-AA----------------AAAATATTAACAAAAAAAAAAAAAACAAACGCAATGCGCCTAAAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAG---------ACCAC-------------------------------AAAAAAATCAGCAAC----------------------------------------------------------------------------------------------TCTGCTGCCG---CTTTCAGGCGAGCTGTTCAAA---ACGCTG---------------------------CGCATATCGCC--------------GCCAACCGTT-GCGCAACAGC----AGCAGCAGCA
droMoj3 scaffold_6473:649583-649865 + TTTTTTTCT------TCTA--------------------------------------------------TA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTTTTTTAACACGTAAAGCTTACTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAACATGAG-----------------------------------------------------------------------------------CC------------------------------------------------------------------------------------AA------AAAGAAAATCGAAAATATATAAAAACAAAATTTGATGAAAATT----------CAAAGAA---------AATATAGAAA-------------------------------AATTTTG--GCCTTTGGCTTTTTGGCAAAAATGCGCTTTTCTCATAATTTGTTTTCTCTTCTTCTCTTCTCTTCTCTGTTCTGTGCGCTGTCCGTAAACGTCGTCGCGT-------TCCTTTGCCC------------A-----------------G----------ATGTTGCAGCTCTCGAGT----------------CAGCAACTGTTGCAGCCGC----AAGTGCCGCA
droGri2 scaffold_15203:10159870-10160094 - AACACAACACACGCA-------------------------------------------TTTCGTAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGACAATA-------------------------------------------------------GTAATAAAAAAAA--------------------------A------------ATAAA-ATAAAAAAT--A---------AAAGAAGAAGAAGAAGAAAAAC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAAAAAC---------AAGAGGTTGC-------------------------------AATTTTG--CCAGATAGCTAATTAT---------------------------------------------------------------------------TAGTTAACTTGTAT---CTTTAAGATACGCGGCGCAGCGCATTGCTTAATAGACCAGAATA--GACAA------AGAATGCCGAG----------------CAGCAGAGGCAACAGCAGC----AGTAGAGGCA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droAna3
GTTATATAA-A----CTTACAATTTATTTTTAAAGACTAAAACATAAATATAAAAC--------------------------------------------------------------------------------------------------------------------------A----------------------------------------------------------------------------------------------ACAAATAACTTTTATAATTT---------AAAAGTGAA--------TA----------------T----------------TTTTT-----------------------------------AAACAATAT-----------------------------------------------------------------------------TTCAATTGAAAACTCAACAAAAAAAGACAAACAAAAGGCAATAGATTTC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATA-------------AAGAACTTTTAAAAAATGT--------------------------------------------------------------------------------------------------CCATATTGTCC---CTTCCACATCCCTTGTTCAGCTCATGGATC---------------------------AGCACATCAAG----------------GACCAGCATGCCCAGATGC----AGAAGATGCASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGCCCAGATGC----AGAAGATGC.2111.001001000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATC---------------------------AGCACATCAAG----------------GACCAGCATGCCC....................2711.001010000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAAAAAAAGACAAACC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1850.201010000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAGACAAACAAAAGGAC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051010000
droBip1
ATTATATTA------ACTT--------------------------------------------------TAAAG-----------------------------A----------------------------------------------------------------------------------------------------------------------------------------TATTTTTTAAAACTTC-------------------------------------CTACAGACTT----------------------------------------------------------------------------------------------CAACTT-----------------------------------------------------------------------------TTCAATTGAAAACCCAACAACAAAAGACCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TC-------------------TATAATTTGTCATAAAAAAGAACTTTTATAAAATAT--------------------------------------------------------------------------------------------------CCATGTTGTCC---CTTCCTAATCCCTTGCTTAGCTCATGGATC---------------------------AGCACATCAAG----------------GACCAACATGCCCAGATGC----AGAAGATGCASizeHit CountTotal NormTotal
No Reads
droKik1
AAATACACTTACACA-------------------------------------------GTTCTAAA-------------------------------------------------------------------------------------------------------------------------------------------------TGTTACA----GCTCTTTTAAAACCAATAT---------------TGGAT-------------------------------------------------------------TCAATTGATACATTTT----------------AG-T-AAAACAAGAAATCCTTTAATTAATAAGATAATTCCTA--------------------------------ACAATTCCCCATGTTCC---------------------------------TGA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGTGCAGCTTATGGACC---------------------------AACACATCAAG----------------GACCAGCATGCCCAGATGC----AAAAGATGCASizeHit CountTotal NormTotal
No Reads
droFic1
GCAAAATCG------ATTC--------------------------------------------------AA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGTATTTTTATACGTGAAAATACGTCCAAATAC----GGTTGTTTAAAACGCTGTATCTCCGTTAGTTTG---------ACTTTAATTGAC-----------------TCAAAATTTTT-----------------------------------ACAAAATGT-----------------------------------------------------------------------------TCT-----------------------------------------------------------------CGATAT-ATTGGTCA-----------------------------------------------------------------------------------------------TTCAGAAAAA------AATAAAAA---AAAATA------------------------------------GTAAAAA-------------------ATTTTTT---------------------------------------------------------------------------------------------------------------------------------------------------------AAAAACCT------------------------------------------------------------------------------------------TGTAAAASizeHit CountTotal NormTotal
No Reads
droEle1
GTAATACAA------TTCC-------------------------------------AATTTAATTACTTTAAGCTTACTTAGCAGAACATATTTATATTTAAAAAATTTCTATAAACTATTTCTATAAACTATATTTTTAAAGCAAATCTATGACCATTAAAACCTTAAATAAAATATATCAATTAGAGTTCCTTTTAATTTACTTCTTTAAGGTATG----GCTAT-------TTAATAT---------------CTGAT-------------------------------------------------------------TTATTTGAAATATTTT----------------TT--------------------------------------------------------------------------------------TTT---------------------------------TTAACGTGTAGGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCCGCATCC----------------------------------------------------------------------------------------GTG------GAG-CGCTAT--TC-AGGCCA---------------------------GGATGCGGACGATGAT------------GTTGACGTTGATGTGGTCGACTGCAGTGAC--T--C----GGAAATGCCGSizeHit CountTotal NormTotal
No Reads
droRho1
ATAGTAATAAACA--------------------------------------------------------TA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATATTTTAATATAAG-------------------------------------CTACAAAATG---TATT---------ATTTCAATTAACTTAATATTTT-TGAAAATATTTATT-----------------------TATTTCCAGAATATCAAAGACTAT-----------------------------------------------------------------------------TGCGGGTAAAGCCTGAATTTTGATTGTTTT--CCAAGGCGGTGCGATTAAAGGACGACAAAATTGTGCGGC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAAAAAAAGT----------------------------------------------------------------------------------------------GCA----GGCTCAC---GCTCAAGGGC------------AA---------------------------CTGGAGCAGTTTGAGC------------AGCAG-CAACAGCAGCAGCAGCAGC----AGCAGCAGCASizeHit CountTotal NormTotal
No Reads
droBia1
AAACGATAA------A-------------------------AGAGACACAGAAAAT--------------------------------------------------------------------------------------------------------------------------A----------------------------------------------------------------------------------------------ATACAAAGTATATG-----------------TAATTAAAAAATTGGTA----------------TTTT-TAAAAATGAATATC-------------------------------------------------------TTAAGTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACATTTTAASizeHit CountTotal NormTotal
No Reads
droTak1
ATTATATGT------A-------------------------CG---------------TGTTGAGA-------------------------------------------------------------------------------------------------------------------------------------------------ACAAAAA----CCATATTTTAAATTACAAA---------------TAAAATCAATTG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGAGCAAGAA-----------------------------------------------------------------------------------CAGAATAACCACTGCAAAAATACCTTTTAAACACAAA---------------TACGATATTTTAAAAAAATATATAAATTCAAACAAAAGCTGTAATAAGAA---AGTATAAACAATATTTAAA-------------ATAACAATACATTTAAATAAAATCAACCCACT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGGACGTCGGAC---------------------------AAATGCTGCAA----------------TATCAGCAACCGCAACAGC----AACAACAGCASizeHit CountTotal NormTotal
No Reads
droEug1
ACACAAATTTAATCAATTTATGTTTGAAAGGAGCAAA----AAATAAGTAAAACAG--------------------------------------------------------------------------------------------------------------------------GACAAATAA------------------------------------------------------------------------------------------AATTCCTTTTAAAGCTCTTTAGCCCCCAGACGAAAATC---------AATT---------C----------------TTTTT-----------------------------------TGGGAACGT-----------------------------------------------------------------------------TCCAGCCGGAAAGAAAATAAAAAAAGTCAT--CCATGGAAATGCG---------------------------------------------------------------------------------------------------AAACGAGCTGGGAAACA----------------------------------------------------------------------------------------AAAAA-------------------TATTA-T---------------------------------------------------------------------------------------------------------------------------------------------------------TCCGGCCTAG--------------------------------------------------------------GACGAGCCAAAAGAGCAAA----CACAACTGCASizeHit CountTotal NormTotal
No Reads
dm3
GTGGAAGTG------A-----------------------------AATACGAAACAAAAATATTAAGTCCAAAG-----------------------------G--------------------------------------------------------------------------C--AACTAAGTT---------------------TT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAACCAACATATAAAAATAAAAAATTAAAACAA---TATAGAATTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAATAATAC---AACACAAA-AATTTACAAA-------------A------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAAAAAAACAAACAAG----TGAAACTAGASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
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........................................................................................................................................................................................................................................................................................................................................................................................................................................TAAAACAA---TATAGAATTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TA.......................................................................................................................................................................................................................................................................................................................................................20200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................TAAGTT---------------------TT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAACCAACATATAAAAA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.1020000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
...................................................................................................................................................................................................................TT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAACCAACATATAAAAATAAAAAA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................ATATTAAGTCCAAAG-----------------------------G--------------------------------------------------------------------------C--AACTAAGTT---------------------.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000
........G------A-----------------------------AATACGAAACAAAAATATTAAGTC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................ACAAAAATATTAAGTCCAAAG-----------------------------G--------------------------------------------------------------------------C--.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100
.............................................................ATTAAGTCCAAAG-----------------------------G--------------------------------------------------------------------------C--AACTAA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACAAA-------------A------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAAAAAAACAAACAAG----TGAAA.....28200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................T------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAATAATAC---AACACAAA-AAC.................................................................................................................................................................................................................................................................................................................................21200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................TCCAAAG-----------------------------G--------------------------------------------------------------------------C--AACTAAGTT---------------------TT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000100
..........................................................AATATTAAGTCCAAAG-----------------------------G--------------------------------------------------------------------------C--A....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000001000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................AAAATTAAAACAA---TATAGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............A-----------------------------AATACGAAACAAAAATATTAAGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAAAAAACAAACAAG----TGA.......19200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................AAG-----------------------------G--------------------------------------------------------------------------C--AACTAAGTT---------------------TT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAACC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
.....................................................................CAAAG-----------------------------G--------------------------------------------------------------------------C--AACTAAGTT---------------------TT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAACCAAC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.0510000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................T---------------------TT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAACCAACATATAAAAA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACAAA-------------A------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAAAAAAACAAACAAG----TGAA......27200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
........................................................................AG-----------------------------G--------------------------------------------------------------------------C--AACTAAGTT---------------------TT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAACCAACA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................ATTAAAACAA---TATAGAATTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------.........................................................................................................................................................................................................................................................................................................................................................20200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............A-----------------------------AATACGAAACAAAAATATTAAGTCCAA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................T---------------------TT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAACCAACATATAAAC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.0510000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................AAGTCCAAAG-----------------------------G--------------------------------------------------------------------------C--AACTAAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
..............................................ATACGAAACAAAAATATTAAGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................AAG-----------------------------G--------------------------------------------------------------------------C--AACTAAGTT---------------------TT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGAATTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAATAATAC---AACA.........................................................................................................................................................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
droSim2
TTGTATAGA------ATCAACGTTTGCAGCTAAAAACCAAAACGAAAACCGAAACTAATAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GATAATTTTACAGGTT---------TAAGGCGGCAATGTTCATTT----------------TT-TAAGGAATAACGATA-------------------------------------------------------TTAAGATATCATA--------------------------A------------TTAAC-ATAACAAAT--AGCAACTAAAAACCAAGCAAAAAAAGAAAAAC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAAAAAA-------------------TATTTTT---------------------------------------------------------------------------------------------------------------------------------------------------------TATAATTTCGC-----------------------------------------------------------------------AGCACTTTCACATGATACCCGCASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
........................................................................................................................................................................................................................................................................................AATTTTACAGGTT---------TAAGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100001000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAGAAAAAC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAAAAA.............................................................................................................................................................................................................................................................................................1830.33100000000000001000
droSec2
ATTCAACAG------CAAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAGAAAAAGCAATCCATTTT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGA-------------------------------GCACCAC--TC----------------------------------------------------------------------------------------GCA----TGC---CCCTGC---TCCAACTATGATGCAGCCA---------------------------ATCCA------------GCAGCAACTGCAGCAG-CACTTGCAGCAACATCAGC----AGATGCAGCASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
No Reads
droYak3
ATTCCCAGT------G-------------------------TA---------------TTTT----------------------------------------------------------------------------------------------------------------------------TCTA---------------------GT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAAC-----------------------------------------------------------------------------TAAAGTAAAAATATAAAAAAAAAAACTCAA--CCAAAATCATTTC---------------------------------------------------------------------------------------------------AAACAAAATGCAATAATTCAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T---------------------------AATAATTCAAA----------------ACTCGAAAAAAATAAAAAA----ACAAAAAACASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
No Reads
droEre2
TTGTATAGA------ATCAACGTTTGCAGCTAAAAACCAAAACGAAAACCGAAACTAATAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GATAATTTTACAGGTT---------TAAGGCGGAAATGTTCATTT----------------TTTTAAGGAATAACGATA-------------------------------------------------------TTAAGATATCATA--------------------------A------------TTAAC-ATAACAAAT--AGTAACTAAAAACCAAGCAAAAAAAGAAAAAC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAAAAAA-------------------TATTTTT---------------------------------------------------------------------------------------------------------------------------------------------------------TATAATTTCGC-----------------------------------------------------------------------AGCACTTTCACATGATACCCGCASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
No Reads
dp5
TTGTAAGAG------TTTA--------------------------------------------------AA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTAATTCA---------------ATTAACAGC----AG--GCGCAGCAGAA-----------GTAACAACAATGCCTATGC----------------CTCTGAGAAATTGAAACA-------------------------------------------------------AAAAAATATAGTGTAAATC------GTATAAACTAAATT-TAACAACAAAAATCAAGCAA-------------ATTGTGATCTCAGCAATGAG------------------------AATGGACTATCAAATGCCCCCGCCAGCATTGGCCCTGCAACAGCAACAACAGCAGCAGC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCATGGCC------------TGCAA-CACCAACAGAATCAGCTGC----AGTTGTTGCASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
..........................................................................................................................................................................................................................................................................................................................GCCTATGC----------------CTCTGAGAAATT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAGAATCAGCTGC----AGTTGTTG..2411.0010100000000
................TTA--------------------------------------------------AA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTAATTCA---------------ATTAACAGC----AG--G................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010100000000
.............................................................................................................................................................................................................................................................................................AGCAGAA-----------GTAACAACAATGCCTATGC----------------........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010010000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAACAGCAGCAGC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCAT.......................................................21190.0510000000100
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACAGCAACAACAGCAGCAGC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------............................................................23200.0510000001000
droPer2
TAACCAATGTACC--------------------------------------------------------AG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAAGTCATCAAAAA-A----------------------------------------------------AA---------AATATA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAACTTCGA-------------------------------AATTCTG--ACAGA------------------------------------------------------------------------------------TGCTGCCATGTTTTCC---CTTTCAGATTGCTATCACTGCGA-----------------------------------------------------------------------GCCACTTGC----AGCTGCTGCGSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
No Reads
droWil2
CTTATGCAA------A-------------------------TG---------------GCTCCAAC-------------------------------------------------------------------------------------------------------------------------------------------------AAAAAACTTCCGTTTTT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCCATGCAAGCATCGACATATTTTC-AAAAAAAAAAAAAAAACACTACAGCTTACACTCTTTTCATTGTTAAATAAAGTTGGTCAAAGTGAAATAAGTCAA-------------TTTAAGACAA------AAAAAAAA---AAAATAAATAAAATTTAAT----------------------------------------------------TTTG---------------------------------------------------------------------------------------------------------------------------------------------------------TGGAAAGT------------------------------------------------------------------------------------------TAAAAAASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCATGCAAGCATCGACATATT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100010
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTCAAAGTGAAATAAGT........................................................................................................................................................................................................................................................................................................................................................................................1811.00100100
droVir3
TATAAACAT------A-------------------------TAATATATACAAAAG--------------------------------------------------------------------------------------------------------------------------T----------------------------------------------------------------------------------------------AAATAACATATATA--------------------------------CAC----------------CACAAATATTATACATAT-------------------------------------------------------ATACAAGATTATATAAATCTA---TATACAAGCTATATTTTTAATACAAAAATTAAT-AA----------------AAAATATTAACAAAAAAAAAAAAAACAAACGCAATGCGCCTAAAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAG---------ACCAC-------------------------------AAAAAAATCAGCAAC----------------------------------------------------------------------------------------------TCTGCTGCCG---CTTTCAGGCGAGCTGTTCAAA---ACGCTG---------------------------CGCATATCGCC--------------GCCAACCGTT-GCGCAACAGC----AGCAGCAGCASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G---------ACCAC-------------------------------AAAAAAATCAGCAAC----------------------------------------------------------------------------------------------TCTGCT............................................................................................................................2711.001001000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................CATATATA--------------------------------CAC----------------CACAAATATT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGCAACAGC----AGCAGCAGC.19140.071001000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTAAT-AA----------------AAAATATTAAT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.051000000000000000100000000000000000000000000000000000000000000000
droMoj3
TTTTTTTCT------TCTA--------------------------------------------------TA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTTTTTTAACACGTAAAGCTTACTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAACATGAG-----------------------------------------------------------------------------------CC------------------------------------------------------------------------------------AA------AAAGAAAATCGAAAATATATAAAAACAAAATTTGATGAAAATT----------CAAAGAA---------AATATAGAAA-------------------------------AATTTTG--GCCTTTGGCTTTTTGGCAAAAATGCGCTTTTCTCATAATTTGTTTTCTCTTCTTCTCTTCTCTTCTCTGTTCTGTGCGCTGTCCGTAAACGTCGTCGCGT-------TCCTTTGCCC------------A-----------------G----------ATGTTGCAGCTCTCGAGT----------------CAGCAACTGTTGCAGCCGC----AAGTGCCGCASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTCGTCGCGT-------TCCTTTGCCC------------A-----------------G----------...................................................................2311.001100000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCTCTCGAGT----------------CAGCAACTGTTGC....................2611.001100000
droGri2
AACACAACACACGCA-------------------------------------------TTTCGTAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGACAATA-------------------------------------------------------GTAATAAAAAAAA--------------------------A------------ATAAA-ATAAAAAAT--A---------AAAGAAGAAGAAGAAGAAAAAC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAAAAAC---------AAGAGGTTGC-------------------------------AATTTTG--CCAGATAGCTAATTAT---------------------------------------------------------------------------TAGTTAACTTGTAT---CTTTAAGATACGCGGCGCAGCGCATTGCTTAATAGACCAGAATA--GACAA------AGAATGCCGAG----------------CAGCAGAGGCAACAGCAGC----AGTAGAGGCASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/18/2015 at 02:43 AM