ID:

dan_1674

 Coordinate:

scaffold_13266:111849-111999 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-5.0 -4.4 -4.3 -4.1

Flybase annnotation

intron [Dana\GF12487-in]; exon [dana_GLEANR_12490:2]; CDS [Dana\GF12487-cds]; intron [Dana\GF12487-in]

No Repeatable elements found

mature
  1. scaffold_2989:662-687 -
  2. scaffold_3072:1091-1116 +
  3. scaffold_3268:1716-1741 -
  4. scaffold_6022:80-105 +
  5. scaffold_9845:226-251 -
  6. scaffold_10222:83-108 -
  7. scaffold_10222:1329-1354 -
  8. scaffold_10222:2912-2937 -
  9. scaffold_10222:4158-4183 -
  10. scaffold_11092:619-644 -
  11. scaffold_13077:39847-39872 -
  12. scaffold_13077:41091-41116 -
  13. scaffold_13077:42335-42360 -
  14. scaffold_13077:43581-43606 -
  15. scaffold_13077:44827-44852 -
  16. scaffold_13077:46073-46098 -
  17. scaffold_13077:48444-48469 -
  18. scaffold_13077:49690-49715 -
  19. scaffold_13077:74019-74044 -
  20. dan_1674  scaffold_13266:111924-111949 -
star
  1. scaffold_2989:618-638 -
  2. scaffold_3072:1140-1160 +
  3. scaffold_3268:1672-1692 -
  4. scaffold_5277:241-261 -
  5. scaffold_9845:182-202 -
  6. scaffold_10222:1285-1305 -
  7. scaffold_10222:2868-2888 -
  8. scaffold_10222:4114-4134 -
  9. scaffold_10685:1274-1294 -
  10. scaffold_11092:575-595 -
  11. scaffold_13077:39803-39823 -
  12. scaffold_13077:41047-41067 -
  13. scaffold_13077:42291-42311 -
  14. scaffold_13077:44783-44803 -
  15. scaffold_13077:46029-46049 -
  16. scaffold_13077:47275-47295 -
  17. scaffold_13077:49646-49666 -
  18. scaffold_13077:50888-50908 -
  19. scaffold_13077:73975-73995 -
  20. dan_1674  scaffold_13266:111880-111900 -
  21. scaffold_10222:39-59 -
  22. scaffold_11109:7-27 -
  23. scaffold_13077:43537-43557 -
  24. scaffold_13077:48400-48420 -

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------################################------------------
GAGGAGATTCTAATGTTTTTTTTTTTAATTTGTATATATGTTTATATATGCTTTTATTTGTTGTATGTCAGTGCTTGTTAATGTTTCACGTTTACAATTTATATTGGCACATTATAATATTGGCACAACAAGTTCATTAGTCATTGGTTTACAACAAGAAAAAGGAGGGGGCAAATTTAAACAATATAATTTACAAAAAAGAGGGAAGCGGCAAAGCCGTGCTACCGATGCTGGTAAGGGGCGGGGAGGAT
****************************************************************************************************................................((..((..((.(((........))))).....))..))********************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total M058
embryo
 M044
female body
 V105
male body		 V055
head
 V039
embryo
 V106
head
....................................................................................................ATATTGGCACATTATAATATTGGCAC............................................................................................................................. 26 0 20 1.05 21 21 0 0 0 0 0
..................................................................................................................TAATATTGGCACAACAAGTTCATTAGT.............................................................................................................. 27 0 20 0.95 19 12 7 0 0 0 0
.....................................................................................................TATTGGCACATTATAATATTGGCAC............................................................................................................................. 25 0 20 0.80 16 16 0 0 0 0 0
..............................................................................................................................................................................................................................TACCGATGCTGGTAAGGGGC......... 20 0 3 0.67 2 1 1 0 0 0 0
.....................................................................................................................................................TACAACAAGAAAAAGGAGGGG................................................................................. 21 0 20 0.60 12 10 2 0 0 0 0
.....................................................................................................................................................TACAACAAGAAAAAGGAGGGGGC............................................................................... 23 0 20 0.55 11 7 3 0 0 1 0
..................................................................................................................TAATATTGGCACAACAAGTTCATTAG............................................................................................................... 26 0 20 0.50 10 3 7 0 0 0 0
...............................................................................................................TTATAATATTGGCACAACAAGTTCAT.................................................................................................................. 26 0 20 0.40 8 7 1 0 0 0 0
....................................................................................................................................................TTACAACAAGAAAAAGGAGGG.................................................................................. 21 0 20 0.35 7 3 4 0 0 0 0
.....................................................................................................................TATTGGCACAACAAGTTCATTAGTC............................................................................................................. 25 0 20 0.35 7 5 2 0 0 0 0
..........................................................................................................................................................................................TAATTTACAAAAAAGAGGGAAGCGG........................................ 25 0 3 0.33 1 0 0 1 0 0 0
.....................................................TTATTTGTTGTATGTCAGTGCTTGT............................................................................................................................................................................. 25 0 3 0.33 1 0 0 1 0 0 0
.................................................................................................................................AAGTTCATTAGTCATTGGTTTACAA................................................................................................. 25 0 3 0.33 1 0 1 0 0 0 0
.....................................ATGTTTATATATGCTTTTATTTGTTGT........................................................................................................................................................................................... 27 0 3 0.33 1 1 0 0 0 0 0
.............................................................TGTATGTCAGTGCTTGTTAATGTT...................................................................................................................................................................... 24 0 3 0.33 1 0 0 1 0 0 0
....................................................................................................................................................TTACAACAAGAAAAAGGAGG................................................................................... 20 0 20 0.30 6 3 1 1 0 1 0
.............................................................................................................CATTATAATATTGGCACAACAAGTTC.................................................................................................................... 26 0 20 0.25 5 0 5 0 0 0 0
.............................................................................................................CATTATAATATTGGCACAACAAGTTCAT.................................................................................................................. 28 0 20 0.25 5 3 2 0 0 0 0
.......................................................ATTTGTTGTATGTCAGTGCTT............................................................................................................................................................................... 21 0 12 0.25 3 2 1 0 0 0 0
.....................................................................................................................................................TACAACAAGAAAAAGGAGGGGGCA.............................................................................. 24 0 20 0.25 5 0 5 0 0 0 0
..................................................................................................................................................................................................AAAATACAGGGAATCGGCAAA.................................... 21 3 12 0.25 3 0 2 0 0 0 1
.....................................................................................................................................................TACAACAAGAAAAAGGAGGGGGCAAAT........................................................................... 27 0 20 0.20 4 0 4 0 0 0 0
..................................................................................................................TAATATTGGCACAACAAGTTCATTAGTC............................................................................................................. 28 0 20 0.20 4 1 3 0 0 0 0
.....................................................................................................................................................TACAACAAGAAAAAGGAGGGGGCAAA............................................................................ 26 0 20 0.20 4 1 3 0 0 0 0
......................................................................................................................................................ACAACAAGAAAAAGGAGG................................................................................... 18 0 20 0.20 4 4 0 0 0 0 0
.....................................................................................................................TATTGGCACAACAAGTTCATTAGT.............................................................................................................. 24 0 20 0.20 4 3 0 1 0 0 0
....................................................................................................ATATTGGCACATTATAATATTGGCACA............................................................................................................................ 27 0 20 0.20 4 3 1 0 0 0 0
.....................................................................................................................................................TACAACAAGAAAAAGGAGGG.................................................................................. 20 0 20 0.20 4 0 1 3 0 0 0
.......................................................................................................................................................CAACAAGAAAAAGGAGGGG................................................................................. 19 0 20 0.15 3 2 1 0 0 0 0
...................................................................................................TATATTGGCACATTATAATATTGGCAC............................................................................................................................. 27 0 20 0.15 3 2 1 0 0 0 0
.....................................................................................................TATTGGCACATTATAATATTGGCACA............................................................................................................................ 26 0 20 0.15 3 3 0 0 0 0 0
.....................................................................................................................................................TACAACAAGAAAAAGGAGGGGG................................................................................ 22 0 20 0.15 3 3 0 0 0 0 0
...................................................................................................................AATATTGGCACAACAAGTTCATTAGT.............................................................................................................. 26 0 20 0.15 3 2 1 0 0 0 0
....................................................................................................................ATATTGGCACAACAAGTTCATTAGTC............................................................................................................. 26 0 20 0.15 3 1 2 0 0 0 0
...............................................................................................................TTATAATATTGGCACAACAAG....................................................................................................................... 21 0 20 0.15 3 1 2 0 0 0 0
......................................................................................................................................................ACAACAAGAAAAAGGAGGGG................................................................................. 20 0 20 0.15 3 3 0 0 0 0 0
...................................................................................................................................................................................................AAATACAGGGAATCGGCAAA.................................... 20 3 20 0.15 3 0 0 1 0 0 2
.......................................................................................................TTGGCACATTATAATATTGGC............................................................................................................................... 21 0 20 0.15 3 3 0 0 0 0 0
....................................................................................................................................................TTACAACAAGAAAAAGGAGGGGG................................................................................ 23 0 20 0.15 3 0 3 0 0 0 0
.....................................................................................TCACGTTTACAATTTATATTGGCAC............................................................................................................................................. 25 0 20 0.15 3 3 0 0 0 0 0
...................................................................................................................................................TTTACAACAAGAAAAAGGAGG................................................................................... 21 0 20 0.15 3 1 2 0 0 0 0
................................................................................................................................................TGGTTTACAACAAGAAAAAGGAGGGG................................................................................. 26 0 20 0.10 2 1 1 0 0 0 0
......................................................................................................................................................ACAACAAGAAAAAGGAGGGGGC............................................................................... 22 0 20 0.10 2 2 0 0 0 0 0
...........................................................................................................CACATTATAATATTGGCACAACAAGT...................................................................................................................... 26 0 20 0.10 2 1 1 0 0 0 0
.........................................................................................................GGCACATTATAATATTGGCAC............................................................................................................................. 21 0 20 0.10 2 1 1 0 0 0 0
................................................................................................................................................TGGTTTACAACAAGAAAAAGGAGG................................................................................... 24 0 20 0.10 2 1 1 0 0 0 0
......................................................................................CACGTTTACAATTTATATTGG................................................................................................................................................ 21 0 20 0.10 2 0 2 0 0 0 0
..................................................................................................................TAATATTGGCACAACAAGTTCATT................................................................................................................. 24 0 20 0.10 2 1 1 0 0 0 0
...................................................................................................................AATATTGGCACAACAAGTTCATTAG............................................................................................................... 25 0 20 0.10 2 0 2 0 0 0 0
.....................................................TTATTTGTTGTATGTCAGT................................................................................................................................................................................... 19 0 20 0.10 2 0 0 2 0 0 0
......................................................................................................................................................ACAACAAGAAAAAGGAGGGGG................................................................................ 21 0 20 0.10 2 2 0 0 0 0 0
.........................................................................................................................................................ACAAGAAAAAGGAGGGGGCAA............................................................................. 21 0 20 0.10 2 0 2 0 0 0 0
.....................................................................................................................................................TACAACAAGAAAAAGGAGGGGGCAAATT.......................................................................... 28 0 20 0.10 2 0 2 0 0 0 0
........................................................................................................................................................AACAAGAAAAAGGAGGGGGCA.............................................................................. 21 0 20 0.10 2 1 1 0 0 0 0
................................................................................................................................................TGGTTTACAACAAGAAAAAGGAGGGGG................................................................................ 27 0 20 0.10 2 1 1 0 0 0 0
...................................................................................................................................................TTTACAACAAGAAAAAGGAGGGG................................................................................. 23 0 20 0.10 2 0 2 0 0 0 0
.......................................................................................ACGTTTACAATTTATATTGGCAC............................................................................................................................................. 23 0 20 0.10 2 1 1 0 0 0 0
.................................................................................TGTTTCACGTTTACAATTTATATTGGCA.............................................................................................................................................. 28 0 20 0.10 2 0 2 0 0 0 0
..................................................................................................TTATATTGGCACATTATAATATTGGC............................................................................................................................... 26 0 20 0.10 2 2 0 0 0 0 0
.......................................................................................ACGTTTACAATTTATATTGGCACA............................................................................................................................................ 24 0 20 0.10 2 0 2 0 0 0 0
....................................................................................................................................................TTACAACAAGAAAAAGGAGGGG................................................................................. 22 0 20 0.10 2 0 2 0 0 0 0
......................................................TATTTGTTGTATGTCAGTGCT................................................................................................................................................................................ 21 0 12 0.08 1 0 1 0 0 0 0
.....................................................TTCTTTGTTGTATGTCAGTGC................................................................................................................................................................................. 21 1 12 0.08 1 1 0 0 0 0 0
........................................................TTTGTTGTATGTCAGTGCT................................................................................................................................................................................ 19 0 12 0.08 1 0 0 0 1 0 0
......................................................TATTTGTTGTATGTCAGTGCTT............................................................................................................................................................................... 22 0 12 0.08 1 0 0 0 0 0 1
.....................................................TTATTTGTTGTATGTCAGTGCTTTTT............................................................................................................................................................................ 26 1 12 0.08 1 0 0 0 1 0 0
........................................................TTTGTTGTATGTCAGTGCTT............................................................................................................................................................................... 20 0 12 0.08 1 0 1 0 0 0 0
........................................................................................................................................................................................................GAGTGAAGCGGCAAAACC................................. 18 2 15 0.07 1 0 0 0 1 0 0
.....................................................................................................................................................................................................................................GCGGGTAAGGGGCGGGC..... 17 2 19 0.05 1 0 0 0 1 0 0
...........................................................................................TTACAATTTATATTGGCACA............................................................................................................................................ 20 0 20 0.05 1 0 1 0 0 0 0
.....................................................................................................TATTGGCACATTATAATATT.................................................................................................................................. 20 0 20 0.05 1 1 0 0 0 0 0
........................................................................................................................................................................................TATAATTTACAAAAGGGAGGT.............................................. 21 3 20 0.05 1 1 0 0 0 0 0
......................................................................................................AGTGGCACATTATAATATTGG................................................................................................................................ 21 1 20 0.05 1 1 0 0 0 0 0
...................................................................................................................AATATTGGCACAACAAGTTCATTA................................................................................................................ 24 0 20 0.05 1 0 1 0 0 0 0
........................................................................................................TGGCACATTATAATATTGGC............................................................................................................................... 20 0 20 0.05 1 1 0 0 0 0 0
..................................................................................................................TAATATTGGCACAACAAGTTCATTT................................................................................................................ 25 1 20 0.05 1 0 1 0 0 0 0
......................................................................................................................................................ACAACAAGAAAAAGGAGGGT................................................................................. 20 1 20 0.05 1 1 0 0 0 0 0
.....................................................................................................TACTGGCACATTATAATATTGGCAC............................................................................................................................. 25 1 20 0.05 1 1 0 0 0 0 0
.................................................................................................TTTATATTGGCACATTATAATATTGGC............................................................................................................................... 27 0 20 0.05 1 1 0 0 0 0 0
.....................................................................................................................TATGGGCACAACAAGTTCATTATTC............................................................................................................. 25 2 20 0.05 1 1 0 0 0 0 0
.................................................................................................................ATAATATTGGCACAACAAGTT..................................................................................................................... 21 0 20 0.05 1 0 1 0 0 0 0
...............................................................................................................GTATAATATTGGCACAACAAG....................................................................................................................... 21 1 20 0.05 1 0 1 0 0 0 0
........................................................................................................................................................AACAAGAAAAAGGAGGGGGCAAATT.......................................................................... 25 0 20 0.05 1 0 1 0 0 0 0
.....................................................................................................................................................TACAACAAGAAAAAGGAGGGGGCAA............................................................................. 25 0 20 0.05 1 1 0 0 0 0 0
.....................................................................................................................................................TACAACAAGAAAAAGGAGGGGGCAATT........................................................................... 27 1 20 0.05 1 0 1 0 0 0 0
.......................................................................................................TTGGCACATTATAATATTGGCAC............................................................................................................................. 23 0 20 0.05 1 1 0 0 0 0 0
....................................................................................................ATATTGGCACATTATAATATTGGC............................................................................................................................... 24 0 20 0.05 1 1 0 0 0 0 0
.....................................................................................................................................................TACAACAAGAAAAAGGAGGGGGCAAG............................................................................ 26 1 20 0.05 1 0 1 0 0 0 0
....................................................................................................................GTATTGGCACAACAAGTTCAT.................................................................................................................. 21 1 20 0.05 1 0 1 0 0 0 0
.....................................................................................................TATTGGCATATTATAATATTGGCAC............................................................................................................................. 25 1 20 0.05 1 0 1 0 0 0 0
................................................................................................................................................TGGTTTACAACAAGAAAAAGGAGGG.................................................................................. 25 0 20 0.05 1 0 0 0 0 1 0
..............................................................................................................ATTATAATATTGGCACAACAAG....................................................................................................................... 22 0 20 0.05 1 0 1 0 0 0 0
.....................................................................................................TATGGGCACATTATAATATTGGCAC............................................................................................................................. 25 1 20 0.05 1 1 0 0 0 0 0
........................................................................................................................................................................................................AAGGGAAGCGGCAAAACCT................................ 19 3 20 0.05 1 0 0 0 1 0 0
.........................................................................................................GGCACATTATAATATTGGCACAACAAG....................................................................................................................... 27 0 20 0.05 1 1 0 0 0 0 0
...................................................TTTTATTTGTTGTATGTCAGT................................................................................................................................................................................... 21 0 20 0.05 1 0 0 0 1 0 0
...............................................................................................................TTATAATATTGGCACAACAAGTTCATTAG............................................................................................................... 29 0 20 0.05 1 0 1 0 0 0 0
.....................................................................................TCACGTTTACAATTTATATTGGCACAC........................................................................................................................................... 27 1 20 0.05 1 1 0 0 0 0 0
.........................................................................................................GGCACATTATAATATTGGCA.............................................................................................................................. 20 0 20 0.05 1 0 1 0 0 0 0
..................................................................................................................TAATATTGGCACAACAAGTTCATTA................................................................................................................ 25 0 20 0.05 1 0 1 0 0 0 0
.............................................................................................ACAATTTAGATTGGCACATTATAATATT.................................................................................................................................. 28 1 20 0.05 1 0 1 0 0 0 0
.....................................................................................................TATTGGCACATTATAATATTTGCAC............................................................................................................................. 25 1 20 0.05 1 1 0 0 0 0 0
...................................................................................................................AATATTGGAACAACAAGTCCATTAGTC............................................................................................................. 27 2 20 0.05 1 0 1 0 0 0 0
.................................................................................................................................................................................TAAACAATATAATTTACAAAAAAGAGG............................................... 27 0 20 0.05 1 1 0 0 0 0 0
.....................................................................................................................................................AACAACAAGAAAAAGGAGGGGGC............................................................................... 23 1 20 0.05 1 1 0 0 0 0 0
............................................................................................................................................................AGAAAAAGGAGGGGGCAAATTTA........................................................................ 23 0 20 0.05 1 1 0 0 0 0 0
............................................................................................................................................................AGAAAAAGGAGGGGGCAAATTTAAAC..................................................................... 26 0 20 0.05 1 1 0 0 0 0 0
.....................................................................................................................................................TGCAACAAGAAAAAGGAGGGGGC............................................................................... 23 1 20 0.05 1 1 0 0 0 0 0
.......................................................................................................TTGACACATTATAATATTGTC............................................................................................................................... 21 2 20 0.05 1 0 0 0 0 1 0
.....................................................................................................................TATTGGCACAACAAGTTCATTAGTT............................................................................................................. 25 1 20 0.05 1 1 0 0 0 0 0
....................................................................................................................ATATTGGCACAACAAGTTCATTAGT.............................................................................................................. 25 0 20 0.05 1 1 0 0 0 0 0
..................................................................................................................TAATATTGGCACAACAAGTTCATTAGC.............................................................................................................. 27 1 20 0.05 1 1 0 0 0 0 0
......................................................................................................................ATTGGCACAACAAGTTCATTAGC.............................................................................................................. 23 1 20 0.05 1 1 0 0 0 0 0
.................................................................................................................................................GGTTTACAACAAGAAAAAGGAGGGG................................................................................. 25 0 20 0.05 1 0 0 1 0 0 0
.......................................................................................................................................................CAACAAGAAAAAGGAGGGGGCC.............................................................................. 22 1 20 0.05 1 1 0 0 0 0 0
........................................................................................................TGGCACATTATAATATTGGCACAACAAG....................................................................................................................... 28 0 20 0.05 1 0 1 0 0 0 0
...................................................................................................................................................TTTACAACAAGAAAAAGGAGGGGGC............................................................................... 25 0 20 0.05 1 1 0 0 0 0 0
.......................................................................................................................................................CAACAAGAAAAAGAAGGGGC................................................................................ 20 2 20 0.05 1 0 1 0 0 0 0
..................................................................................................................................................GTTTACAACAAGAAAAAGGAG.................................................................................... 21 0 20 0.05 1 0 1 0 0 0 0
...................................................................................CTTCACGTTTACAATTTATATTGGCACA............................................................................................................................................ 28 1 20 0.05 1 1 0 0 0 0 0
....................................................................................................................................................TGACAACAAGAAAAAGGAGGGGGC............................................................................... 24 1 20 0.05 1 1 0 0 0 0 0
.....................................................................................................................TATTGGCACAACAAGTTC.................................................................................................................... 18 0 20 0.05 1 1 0 0 0 0 0
..........................................................................................................................................................................................TAATTTACAAAAAAGAGGTA............................................. 20 1 20 0.05 1 1 0 0 0 0 0
................................................................................................................TATAATATTGGCACAACAAGTTCATTAGT.............................................................................................................. 29 0 20 0.05 1 0 1 0 0 0 0
......................................................................................................ATTGGCACATTATAATATTGGCAC............................................................................................................................. 24 0 20 0.05 1 0 1 0 0 0 0
....................................................................................................................ATATTGGCACAACAAGTTCAT.................................................................................................................. 21 0 20 0.05 1 1 0 0 0 0 0
..................................................................................GGTTCACGTTTACAATTTATATTGGCAC............................................................................................................................................. 28 1 20 0.05 1 1 0 0 0 0 0
...................................................................................................................................................TTTACAACAAGAAAAAGGAGGG.................................................................................. 22 0 20 0.05 1 1 0 0 0 0 0
.........................................................................................................................................................ACAAGAAAGAGGAGGGGGCA.............................................................................. 20 1 20 0.05 1 0 1 0 0 0 0
................................................................................................................TATAATATTGGCACAACAAGTTCATTAG............................................................................................................... 28 0 20 0.05 1 0 1 0 0 0 0
.............................................................................................................CATTATAACATTGGCACAACAAG....................................................................................................................... 23 1 20 0.05 1 0 1 0 0 0 0
..................................................................................................................TAATATTGGCACAACAAGTTC.................................................................................................................... 21 0 20 0.05 1 0 1 0 0 0 0
......................................................................................................................................................ACAACAAGAAAAAGGAGGGGGCAAA............................................................................ 25 0 20 0.05 1 0 1 0 0 0 0
.......................................................................................................................................................CGACAAGAAAAAGGAGGGGG................................................................................ 20 1 20 0.05 1 1 0 0 0 0 0
..................................................................................................................TAATATTGGCCCAACAAGTTCATTAGT.............................................................................................................. 27 1 20 0.05 1 1 0 0 0 0 0
...............................................................................................................TTTTAATATTGGCACAACAAGTTCAT.................................................................................................................. 26 1 20 0.05 1 1 0 0 0 0 0
...................................................................................GCTCACGTTTACAATTTATATTGGCAC............................................................................................................................................. 27 2 20 0.05 1 0 1 0 0 0 0
............................................................................................TACAATTTATATTGGCACATT.......................................................................................................................................... 21 0 20 0.05 1 0 1 0 0 0 0
..................................................................................................TTATATTGGCACATTATAATATTGGCA.............................................................................................................................. 27 0 20 0.05 1 0 1 0 0 0 0
........................................................................................................................................................AACAAGAAAAAGGAGGGGGC............................................................................... 20 0 20 0.05 1 1 0 0 0 0 0
...........................................................................................TTACAATTTATATTGGCACATTATAAT..................................................................................................................................... 27 0 20 0.05 1 1 0 0 0 0 0
...........................................................................................................................CACAACAAGTTCATTAGTCA............................................................................................................ 20 0 20 0.05 1 0 1 0 0 0 0
.....................................................................................................................TATTGGCACAACAAGTTCATTAGC.............................................................................................................. 24 1 20 0.05 1 1 0 0 0 0 0
......................................................................................CACGTTTACAATTTATATTGGCACA............................................................................................................................................ 25 0 20 0.05 1 1 0 0 0 0 0
....................................................................................TTCACGTTTACAATTTATATTGGCACAT........................................................................................................................................... 28 0 20 0.05 1 0 1 0 0 0 0
......................................................................................................ATTGGCACATTATAATATTGG................................................................................................................................ 21 0 20 0.05 1 0 1 0 0 0 0
...................................................TGTTATTTGTTGTATGTCAGT................................................................................................................................................................................... 21 1 20 0.05 1 1 0 0 0 0 0
.............................................................................................ACAATTTATATTGGCACATTA......................................................................................................................................... 21 0 20 0.05 1 1 0 0 0 0 0
....................................................................................TTCACGTTTACAATTTATATTGGCACA............................................................................................................................................ 27 0 20 0.05 1 0 1 0 0 0 0
....................................................................................................................ATATCGACACAACAAGTTCATTAGT.............................................................................................................. 25 2 20 0.05 1 1 0 0 0 0 0
............................................................................................................ACATTATAATATTGGCACA............................................................................................................................ 19 0 20 0.05 1 0 1 0 0 0 0
...................................................................................TTTCACGTTTACAATTTATATTGGCACAC........................................................................................................................................... 29 1 20 0.05 1 0 1 0 0 0 0
.....................................................................................................................................................TACAACAAGAAAAAGGAGGGTGC............................................................................... 23 1 20 0.05 1 1 0 0 0 0 0
.....................................................................................................................TATTGGCACAACGAGTTCATTAGTC............................................................................................................. 25 1 20 0.05 1 0 0 0 0 1 0
...................................................................................................................AATATTGGCACAACAAGTTCAC.................................................................................................................. 22 1 20 0.05 1 1 0 0 0 0 0
.....................................................................................................................TATTGGCACAACAAGTTCATTAGTCA............................................................................................................ 26 0 20 0.05 1 0 1 0 0 0 0
.....................................................................................TCACGTTTACAATTTATATTGGCACA............................................................................................................................................ 26 0 20 0.05 1 0 1 0 0 0 0
....................................................................................................................AGCTTGGCACAACAAGTTCAT.................................................................................................................. 21 2 20 0.05 1 1 0 0 0 0 0
....................................................................................................ATATTGGCACACTATAATATTGGCAC............................................................................................................................. 26 1 20 0.05 1 1 0 0 0 0 0
.............................................................................................ACAATTTATATTGGCACATTATAAT..................................................................................................................................... 25 0 20 0.05 1 1 0 0 0 0 0
....................................................................................................................ATATTGGCACAACAAGTTCATTAGTCA............................................................................................................ 27 0 20 0.05 1 1 0 0 0 0 0
.................................................................................................TTTATATTGGCACATTATAATATTGGCAC............................................................................................................................. 29 0 20 0.05 1 1 0 0 0 0 0
.......................................................................................ACGTTTACAATTTATATTGGCACATTA......................................................................................................................................... 27 0 20 0.05 1 0 1 0 0 0 0
..................................................................................................TTATATTGGCACATTATAATATTGGCAC............................................................................................................................. 28 0 20 0.05 1 1 0 0 0 0 0
.......................................................................................ACGTTTACAATTTATATTGGCACATT.......................................................................................................................................... 26 0 20 0.05 1 0 1 0 0 0 0
....................................................................................................................ATATTGGCACAACAAGTTCATTAGC.............................................................................................................. 25 1 20 0.05 1 1 0 0 0 0 0
......................................................................................................................ATTGGCACAACAAGTTCATTAGT.............................................................................................................. 23 0 20 0.05 1 1 0 0 0 0 0
...................................................................................................................................................TTCACAACAAGAAAAAGGAGG................................................................................... 21 1 20 0.05 1 0 0 0 0 1 0
.....................................................................................................................................................TAAAACAAGAAAAAGGAGGGGGCAA............................................................................. 25 1 20 0.05 1 1 0 0 0 0 0
.........................................................................................................................................................ACAAGAAAAAGGAGGGGGCTT............................................................................. 21 2 20 0.05 1 1 0 0 0 0 0
...................................................................................................................................................TTTACAACAAGAAAAAGGAGGGGG................................................................................ 24 0 20 0.05 1 1 0 0 0 0 0
...........................................................................................................CACATTATAATATTGGCACAACAAG....................................................................................................................... 25 0 20 0.05 1 0 1 0 0 0 0
..................................................................................GTTTCACGCTTACAATTTATATTGGC............................................................................................................................................... 26 1 20 0.05 1 0 1 0 0 0 0
.........................................................................................................GTAACATTATAATATTGGCAC............................................................................................................................. 21 2 20 0.05 1 1 0 0 0 0 0
..................................................................................................................TAATATTGGCACAACAAGTTCTTTAG............................................................................................................... 26 1 20 0.05 1 0 1 0 0 0 0
....................................................................................................................CTATTGGCACAACAAGTTCATTAGTC............................................................................................................. 26 1 20 0.05 1 1 0 0 0 0 0
.............................................................................................................................................................GAAAAAGGAGGGGGCAAATTTAAACA.................................................................... 26 0 20 0.05 1 0 1 0 0 0 0
...................................................................................................................AATATTGGCACAACAAGTTCATTAGTC............................................................................................................. 27 0 20 0.05 1 0 1 0 0 0 0
...................................................................................................................................................TTCACAACAAGAAAAAGGAGGG.................................................................................. 22 1 20 0.05 1 1 0 0 0 0 0
...............................................................................................................................................................AAAAGGAGGGGGCAAATTTAAACAAT.................................................................. 26 0 20 0.05 1 1 0 0 0 0 0
..................................................................................................TTATATTGGCACATTATAATATTGGCACA............................................................................................................................ 29 0 20 0.05 1 0 1 0 0 0 0
........................................................................................................GGGCACATTATAATATTGGCACAACAAG....................................................................................................................... 28 1 20 0.05 1 0 1 0 0 0 0
............................................................................................TACAATTTATATTGGCACATTATAATATT.................................................................................................................................. 29 0 20 0.05 1 0 1 0 0 0 0
...................................................TTTGATTTGTTGTCTGTCAG.................................................................................................................................................................................... 20 2 20 0.05 1 0 0 0 1 0 0
..........................................................................................TTTACAATTTATATTGGCACATTATAA...................................................................................................................................... 27 0 20 0.05 1 0 1 0 0 0 0
....................................................................................................................................................TTACAACAAGAAAAAGGAGGGGGC............................................................................... 24 0 20 0.05 1 1 0 0 0 0 0
..............................................................................................................ATTATAATATTGGCACAACAAGTTCAT.................................................................................................................. 27 0 20 0.05 1 1 0 0 0 0 0
.............................................................................................................CATTATAATATTGGCACAACA......................................................................................................................... 21 0 20 0.05 1 0 1 0 0 0 0
....................................................................................TTCACGTTTACAATTTATATTGGCAC............................................................................................................................................. 26 0 20 0.05 1 1 0 0 0 0 0
..........................................................................................................................................................CAAGAAAAAGGAGGGGGCAA............................................................................. 20 0 20 0.05 1 0 1 0 0 0 0
............................................................................................................ACATTATAATATTGGCACAA........................................................................................................................... 20 0 20 0.05 1 1 0 0 0 0 0
..................................................................................................................ATCTATTGGCACAACAAGTTCATTAGTC............................................................................................................. 28 3 20 0.05 1 1 0 0 0 0 0
..........................................................................................................................................................CAAGAAAAAGGAGGGGGCAAATTTA........................................................................ 25 0 20 0.05 1 0 1 0 0 0 0
.....................................................................................................................TATTGGCACAACAAGTTCATTAG............................................................................................................... 23 0 20 0.05 1 0 1 0 0 0 0
................................................................................................................................................TGGTTTACAACAAGAAAAAGGAG.................................................................................... 23 0 20 0.05 1 0 0 0 0 1 0
.....................................................................................................................................................TACAACAATAAAAAGGAGGGGG................................................................................ 22 1 20 0.05 1 0 1 0 0 0 0
.................................................................................................................AGAAGATTGGCACAACAAGTTCATTAGC.............................................................................................................. 28 3 20 0.05 1 1 0 0 0 0 0
........................................................................................................................TGGCACAACAAGTTCATTAGT.............................................................................................................. 21 0 20 0.05 1 0 0 0 0 1 0
.........................................................................................................................................................ACAAGAAAAAGGAGGGGGCAAATT.......................................................................... 24 0 20 0.05 1 0 1 0 0 0 0
.................................................................................TGTTTCACGTTTACAATTTATATTGGCAC............................................................................................................................................. 29 0 20 0.05 1 0 1 0 0 0 0
..............................................................................................CAATTTATATTGGCACATTATAATAT................................................................................................................................... 26 0 20 0.05 1 1 0 0 0 0 0
.....................................................................................................................................................TACAACAAGAAAAAGGAGGGGGCAATTT.......................................................................... 28 1 20 0.05 1 0 1 0 0 0 0
.................................................................................................................ATAATATTGGCACAACAAGTTCATTAGT.............................................................................................................. 28 0 20 0.05 1 0 1 0 0 0 0
.............................................................................................................CATTATAATATTGGCACAACAAGTTCA................................................................................................................... 27 0 20 0.05 1 1 0 0 0 0 0
............................................................................................................CCATTATAATATTGGCACAA........................................................................................................................... 20 1 20 0.05 1 0 1 0 0 0 0
........................................................................................................................................................................................TATAATTTACAAAAAAGAGGGA............................................. 22 0 20 0.05 1 1 0 0 0 0 0
.....................................................................................................................................................................ATGGGGCAAATTTAAACAATATAATT............................................................ 26 1 20 0.05 1 1 0 0 0 0 0
.....................................................................................................TATTGGCACATTATAATATTGGCACAAC.......................................................................................................................... 28 0 20 0.05 1 0 1 0 0 0 0
...............................................................................................................................................................................TTTAAACAATATAATTTACAAAAAAGAGG............................................... 29 0 20 0.05 1 1 0 0 0 0 0
.......................................................................................................TGGGCACATTATAATATTGGCACA............................................................................................................................ 24 1 20 0.05 1 1 0 0 0 0 0
...................................................................................................................................................................................AACAATATAATTTACAAAAAAGAGGG.............................................. 26 0 20 0.05 1 1 0 0 0 0 0
.......................................................................................................TGGGCACATTATAATATTGGCACAAC.......................................................................................................................... 26 1 20 0.05 1 1 0 0 0 0 0
............................................................................................TACAATTTATATTGGCACATTATAATA.................................................................................................................................... 27 0 20 0.05 1 1 0 0 0 0 0
.....................................................................................................................................................................................................................................GCTGGTAACCGGCGGGGTG... 19 3 20 0.05 1 0 0 0 1 0 0
........................................................................................................TGGCACATTATAATATTGGCAC............................................................................................................................. 22 0 20 0.05 1 1 0 0 0 0 0
.....................................................................................................TATTGGCACATTATAATATTGGGAC............................................................................................................................. 25 1 20 0.05 1 1 0 0 0 0 0
..............................................................................................................ATTATAATATTGGCACAACAAGTTCAC.................................................................................................................. 27 1 20 0.05 1 1 0 0 0 0 0
.......................................................................................................TGGGCACATTATAATATTGGC............................................................................................................................... 21 1 20 0.05 1 1 0 0 0 0 0
.....................................................................................................TATCGGCACATTATAATATTGGCACAAC.......................................................................................................................... 28 1 20 0.05 1 1 0 0 0 0 0

Anti-sense strand reads

CTCCTCTAAGATTACAAAAAAAAAAATTAAACATATATACAAATATATACGAAAATAAACAACATACAGTCACGAACAATTACAAAGTGCAAATGTTAAATATAACCGTGTAATATTATAACCGTGTTGTTCAAGTAATCAGTAACCAAATGTTGTTCTTTTTCCTCCCCCGTTTAAATTTGTTATATTAAATGTTTTTTCTCCCTTCGCCGTTTCGGCACGATGGCTACGACCATTCCCCGCCCCTCCTA
*********************************************************************************................................((..((..((.(((........))))).....))..))**************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M044
female body
 M058
embryo
 V039
embryo
...................................................................................................................................................................CCTCCCCCGTTTAAATTTGTT................................................................... 21 0 20 0.65 13 11 2 0
......................................................................................................................................................................................................................TCGGCACGATGGCTACGACCATTCCC........... 26 0 3 0.33 1 1 0 0
.....................................................................TCACGAACAATTACAAAGTGCAAATGTT.......................................................................................................................................................... 28 0 3 0.33 1 0 1 0
.....................................................................................................................ATAACCGTGTTGTTCAAGTAATCAGTA........................................................................................................... 27 0 3 0.33 1 1 0 0
...........................................................................................................................................CAGTAACCAAATGTTGTTCTTTTTCCTCG................................................................................... 29 1 3 0.33 1 1 0 0
........................................................................................................................ACCGTGTTGTTCAAGTAATCA.............................................................................................................. 21 0 20 0.20 4 4 0 0
.......................................................................................................................................................................CCCCGTTTAAATTTGTTATAT............................................................... 21 0 20 0.20 4 0 4 0
.....................................................................................................................ATAACCGTGTTGTTCAAGTAATCAGT............................................................................................................ 26 0 20 0.15 3 3 0 0
.......................................................................................................................AACCGTGTTGTTCAAGTAAT................................................................................................................ 20 0 20 0.15 3 3 0 0
.............................................................................................................................................................CTTTTTCCTCCCCCGTTTAAATTTGT.................................................................... 26 0 20 0.10 2 2 0 0
....................................................................................................................................................................CTCCCCCGTTTAAATTTGTT................................................................... 20 0 20 0.10 2 2 0 0
...................................................................................................................................................................CCTCCCCCGTTTAAATTTGTTATAT............................................................... 25 0 20 0.10 2 2 0 0
................................................................................................................................................................TTTCCTCCCCCGTTTAAATTTGTTAT................................................................. 26 0 20 0.10 2 2 0 0
..................................................................................................................ATTATAACCGTGTTGTTCAAGTAATCA.............................................................................................................. 27 0 20 0.10 2 2 0 0
...............................................................................................................................................................TTTTCCTCCCCCGTTTAAATTTGTTAT................................................................. 27 0 20 0.10 2 2 0 0
.............................................................................................................GTAATATTATAACCGTGTTGTTCAAGT................................................................................................................... 27 0 20 0.10 2 2 0 0
.................................................................................................................................................................TTCCTCCCCCGTTTAAATTT...................................................................... 20 0 20 0.10 2 2 0 0
.................................................................................................................................................................TTCCTCCCCCGTTTAAATTTG..................................................................... 21 0 20 0.10 2 2 0 0
..........................................................................................................CGTGTAATATTATAACCGTGTTGTTCAA..................................................................................................................... 28 0 20 0.10 2 1 1 0
.......................................................................................................................................................GTTGTTCTTTTTCCTCCCCCGTTTAA.......................................................................... 26 0 20 0.10 2 2 0 0
.....................................................................................................................ATAACCGTGTTGTTCAAGTAATCAG............................................................................................................. 25 0 20 0.10 2 2 0 0
...................................................................................................................TTATAACCGTGTTGTTCAAGTAAT................................................................................................................ 24 0 20 0.10 2 2 0 0
..............................................................................................................................................................TTTTTCCTCCCCCGTTTAAAT........................................................................ 21 0 20 0.10 2 1 1 0
..................................................................................................................................................................TCCTCCCCCGTTTAAATTTGT.................................................................... 21 0 20 0.10 2 2 0 0
...................................................................................................................TTATAACCGTGTTGTTCAAGT................................................................................................................... 21 0 20 0.10 2 1 1 0
..........................................................................................................................................................GTTCTTTTTCCTCCCCCGTTT............................................................................ 21 0 20 0.10 2 2 0 0
....................................................................................................................................................................CTCCCCCGTTTAAATTTGTTA.................................................................. 21 0 20 0.10 2 2 0 0
..........................................................................................................................................................GTTCTTTTTCCTCCCCCGTTTAAAT........................................................................ 25 0 20 0.10 2 2 0 0
.................................................................ACAGTCACGAACAAATAAA....................................................................................................................................................................... 19 2 12 0.08 1 0 1 0
.................................................................................ACAAAGTGCAAATGTTAAAGA..................................................................................................................................................... 21 1 20 0.05 1 0 1 0
..........................................................................................................CGTGTAATATTATAACCGTGTTGT......................................................................................................................... 24 0 20 0.05 1 0 0 1
.................................................................................................................................................................TTCCTCCCCCGTTTAAATTTGTTATATT.............................................................. 28 0 20 0.05 1 1 0 0
.........................................................................................................................................................TGTTCTTTTTCCTCCCCCGTTTAAA......................................................................... 25 0 20 0.05 1 1 0 0
.................................................................................................................................................CCAAATGTTGTTCTTTTTCCT..................................................................................... 21 0 20 0.05 1 0 1 0
................................................................................................................ATATTATAACCGTGTTGTTCAAGTAAT................................................................................................................ 27 0 20 0.05 1 1 0 0
..........................................................................................................CTTGTAATATTATAACCGTGTTGTT........................................................................................................................ 25 1 20 0.05 1 0 0 1
...................................................................................................................................................................CCTCCCCCGTTTGAATTTGTT................................................................... 21 1 20 0.05 1 1 0 0
...............................................................................................................AATATTATAACCGTGTTGTTCAAGTAAT................................................................................................................ 28 0 20 0.05 1 1 0 0
.....................................................................................................................................................................TCCCCCGTTTAAATTTGTTATATTAAAT.......................................................... 28 0 20 0.05 1 1 0 0
..........................................................................................................................CGTGTTGTTCAAGTAATCAGT............................................................................................................ 21 0 20 0.05 1 1 0 0
.......................................................................................................................................................GTTGTTCTTTTTCCTCCCCC................................................................................ 20 0 20 0.05 1 1 0 0
....................................................................................................TATAACCGTGTAATATTATA................................................................................................................................... 20 0 20 0.05 1 1 0 0
..........................................................................................................................CGTGTTGTTCAAGTAATCA.............................................................................................................. 19 0 20 0.05 1 1 0 0
..........................................................................................................................................................................CGTTTAAATTTGTTATATTAA............................................................ 21 0 20 0.05 1 0 1 0
..................................................................................................................................................................CCCTCCCCCGTTTAAATTTGTTAT................................................................. 24 1 20 0.05 1 0 1 0
................................................................................................................ATATTATAACCGTGTTGTTCAAGTAA................................................................................................................. 26 0 20 0.05 1 1 0 0
..............................................................................................................................................................TTTTTCCGCCCCCGTTTA........................................................................... 18 1 20 0.05 1 0 0 1
.................................................................................................................TATTATAACCGTGTTGTTCAAGTAAT................................................................................................................ 26 0 20 0.05 1 1 0 0
..........................................................................................................................................................GTTCTTTTTCCACCCCCGTT............................................................................. 20 1 20 0.05 1 1 0 0
..................................................................................................................ATTATAACCGTGTTGTTCAAGTAATCAGT............................................................................................................ 29 0 20 0.05 1 1 0 0
...........................................................................................................GTGTAATATTATAACCGTGTTGTTCAA..................................................................................................................... 27 0 20 0.05 1 0 1 0
.........................................................................................................................................................TGTTCTTTTTCCTCCCCCGTTT............................................................................ 22 0 20 0.05 1 1 0 0
........................................................................................................................................................................CCCGTTTAAATTTGTTATATT.............................................................. 21 0 20 0.05 1 0 1 0
.............................................................................AATTACAAAGTGCAAATGTTAAATATA................................................................................................................................................... 27 0 20 0.05 1 1 0 0
...............................................................................................................................................................TTTTCCTCCCCCGTTTAAATTTGTT................................................................... 25 0 20 0.05 1 1 0 0
..........................................................................................................................................................GTTCTTTTTCCTCCCCCGTTTA........................................................................... 22 0 20 0.05 1 1 0 0
.........................................................................................................................CCGTGTTGTTCAAGTAATCA.............................................................................................................. 20 0 20 0.05 1 0 1 0
..................................................................................................................ATTATAACCGTGTTGTTCAAGTAATC............................................................................................................... 26 0 20 0.05 1 1 0 0
.....................................................................................................................ATAACCGTGTTGTTCAAGTAATC............................................................................................................... 23 0 20 0.05 1 1 0 0
.....................................................................................................................................................................TCCCCCGTTTAAATTTGTTATATT.............................................................. 24 0 20 0.05 1 1 0 0
............................................................................................................................................................TCTTTTTCCTCCCCCGTTTAAATTTGTT................................................................... 28 0 20 0.05 1 1 0 0
..........................................................................................................................................................GTTCTTTTTCCTCCCCCGTTTAAATTT...................................................................... 27 0 20 0.05 1 1 0 0
.......................................................................................................AACCGTTTAATATTATAACCGTGTTGTT........................................................................................................................ 28 1 20 0.05 1 0 0 1
.......................................................................................................................................................GTTGTTCTTTTTCCTCCCCCGTT............................................................................. 23 0 20 0.05 1 1 0 0
..................................................................................................................................................CAAATGTTGTTCTTTTTCATCCCCCGT.............................................................................. 27 1 20 0.05 1 1 0 0
..........................................................................................................................................................GTTCTTTTTCCTCCCCCGTTTAAA......................................................................... 24 0 20 0.05 1 1 0 0
..........................................................................................................CGTGTAATATTATAACCGTGTTGTT........................................................................................................................ 25 0 20 0.05 1 1 0 0
.............................................................................................TGTTAAATATAGCCGTGTAAT......................................................................................................................................... 21 1 20 0.05 1 1 0 0
....................................................................................................................................................................CTCCCCCGTTTATATTTGTTA.................................................................. 21 1 20 0.05 1 1 0 0
...............................................................................................................................................................TTTTCCTCCCCCGTTTAAATTTGTTA.................................................................. 26 0 20 0.05 1 1 0 0
.........................................................................................................................CCGTGTTGTTCAAGTAATCAG............................................................................................................. 21 0 20 0.05 1 0 1 0
..................................................................................................................ATTATAACCGTGTTGTTCAAGTA.................................................................................................................. 23 0 20 0.05 1 1 0 0
.........................................................................................................................................................................CTGTTTAAATTTGTTATATGA............................................................. 21 2 20 0.05 1 0 1 0
.............................................................................................................................................................................TTAAATTTGTTATATTAAATGTTTTTT................................................... 27 0 20 0.05 1 0 1 0
.....................................................................................................................ATAACCGTGTTGTTCAAGTAA................................................................................................................. 21 0 20 0.05 1 1 0 0
......................................................................................................................................................................CCCCCGTTTAAATTTGTTATAT............................................................... 22 0 20 0.05 1 0 1 0
.....................................................................................................................ATAACCGTGTTGTTCAAGTAATCA.............................................................................................................. 24 0 20 0.05 1 1 0 0
.....................................................................................................................................................ATGTTGTTCTTTTTCCTCCCCCGTT............................................................................. 25 0 20 0.05 1 1 0 0
.......................................................................................................................................................GTTGTTCTTTTTCCTCCCCCGTTTAAA......................................................................... 27 0 20 0.05 1 1 0 0
................................................................................................................................................ACCAAATGTTGTTCTTTTTCC...................................................................................... 21 0 20 0.05 1 1 0 0
.....................................................................................................................................................................................GTTATATTAAATGTTTTTCCT................................................. 21 1 20 0.05 1 0 1 0
..................................................................................................................ATTATAACCGTGTTGTTCAAGTAATCAG............................................................................................................. 28 0 20 0.05 1 1 0 0
..........................................................................................................CGTGTAATATTATAACCGTT............................................................................................................................. 20 1 20 0.05 1 0 1 0
....................................................................................................................................................................CTCCCCCGTTTAAATTTGT.................................................................... 19 0 20 0.05 1 1 0 0
.................................................................................................................................................CCAAATGTTGTTCTTTTTCCTCCCCCGT.............................................................................. 28 0 20 0.05 1 1 0 0
.....................................................................................................................................................................TCCCCCGTTTAAATTTGTTAT................................................................. 21 0 20 0.05 1 0 0 1
...................................................................................................................TTATAACCGTGTTGTTCAAGTAATC............................................................................................................... 25 0 20 0.05 1 1 0 0
................................................................................................................ATATTATAACCGTGTTGTTCAAGTAATC............................................................................................................... 28 0 20 0.05 1 0 1 0
...............................................................................................................................................................TTTTCCTCCCCCGTTTAAATT....................................................................... 21 0 20 0.05 1 1 0 0
................................................................................................................................................................CTTCCTCCCCCGTTTAAAT........................................................................ 19 1 20 0.05 1 0 1 0
...................................................................................................................................................................CCTCCCCCGTTTAAATTTGTTA.................................................................. 22 0 20 0.05 1 1 0 0
.....................................................................................................................................................................TCCCCCGTTTAAATTCGTTATATT.............................................................. 24 1 20 0.05 1 1 0 0
.........................................................................................................................................................TGTTCTTTTTCCTCCCCCGTT............................................................................. 21 0 20 0.05 1 1 0 0
.............................................................................................................GTAATATTATAACCGTGTTGTTCAA..................................................................................................................... 25 0 20 0.05 1 1 0 0
.................................................................................................................................................................TTCCTCCCCCGTCTAAATTTG..................................................................... 21 1 20 0.05 1 1 0 0
.......................................................................................................................................................GTTGTTCTTTTTCCTCCCCCGTTTAAAT........................................................................ 28 0 20 0.05 1 1 0 0
..................................................................................................................................................................TCCTCCCCCGTTTAAATTTGTT................................................................... 22 0 20 0.05 1 1 0 0
...................................................................................................................TTATAACCGTGTTGTTCAAGTAATCA.............................................................................................................. 26 0 20 0.05 1 1 0 0
...................................................................................................................TTATAACCGTGTTGTTCAAGTAATCAG............................................................................................................. 27 0 20 0.05 1 0 1 0
......................................................................................................TAACCGTGTAATATTATAACC................................................................................................................................ 21 0 20 0.05 1 0 1 0
.......................................................................................................AACCGTGTAATATTATAACCGTGTTGTT........................................................................................................................ 28 0 20 0.05 1 1 0 0
..................................................................................................................................................CAAATGTTGTTCTTTTTCCTCCCCCGTTT............................................................................ 29 0 20 0.05 1 1 0 0
.............................................................................................................................................................................TTAAATTTGTTATATTAAATGTTTTT.................................................... 26 0 20 0.05 1 0 1 0
..............................................................................................................AAATATTATAACCGTGTTGTTCAAGTA.................................................................................................................. 27 1 20 0.05 1 1 0 0
....................................................................................................................................................................CTCCCCCGTTTAAATTTGTTATATTA............................................................. 26 0 20 0.05 1 1 0 0
.........................................................................................................................CCGTGTTGTTCAAGTAAGC............................................................................................................... 19 1 20 0.05 1 0 1 0
.....................................................................................................ATAACCGTGTAATATTATAACC................................................................................................................................ 22 0 20 0.05 1 1 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droAna3 scaffold_13266:111799-112049 - dan_1674 GAGGAGATTCTAATGTTTTTTTTTTTAATTTGTATATATGTTTATATA----TGCTTTTATTTGTTGTATGTCAGTGCTTGTTAATGTTTCACGTTTACAATT----------------------------------------------------------TATATTGGCACATTATAATATTGGCACAACAAGTTCATTAGTCATTGGTTTACAACAAGAAAAAGGAGGGGGCAAATTTAAACAATATAATTTACAAAAAAGAGGGAAGCGGCAAAGCCGTGCTACCGATGCTGGTAAGGGGCGGGGAGGAT
droBip1 scf7180000393822:7470-7490 + GATGAGATACGGATGTGTTT-------------------------------------------------------------------------------------------------------------------T---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droEle1 scf7180000491278:2010288-2010340 - TGTTTTTT-------------TTT---GTATATGTGTATGTTTATACATACATACATATGTATGTAAG-------------------------------------------------------------------T---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
dm3 chrUextra:9353701-9353760 - TTTTTATA-------ATTATTTCTTTAAATTCTGAATATGTTTCAATG----TCTTTTAATTTGATG--------------------------------------------------------------------TTTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droSec2 scaffold_182:20687-20809 + GAGTAGGTTTTTTTTTTTTT-----------------------------------------------------------TTTTTTTTTTCCATTTTCAACGTCTGGTGACGTTGTCATTTTATTGTCCTCTGATTTTTGCTTAAAATATATAGTGACAATTTG---TGGCAAATTACATTTTCGG--------------------------------------------------------------------------------------------------------------------------------
droVir3 scaffold_12963:15567618-15567699 + TTTTCATT-----------------ATATTTGTATTTCTATTTGTATT----TGTTTTTGTTTTTGGTTTTTCTGTTATTTTTTTTTTTTCATTTTTGGCATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droMoj3 scaffold_6498:77060-77108 - TTTTTT---------------TTTGTAATTTTTATTTTTTTCTTTTTT----TGTATTAATTTGCTG--------------------------------------------------------------------T---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droAna3
GAGGAGATTCTAATGTTTTTTTTTTTAATTTGTATATATGTTTATATA----TGCTTTTATTTGTTGTATGTCAGTGCTTGTTAATGTTTCACGTTTACAATT----------------------------------------------------------TATATTGGCACATTATAATATTGGCACAACAAGTTCATTAGTCATTGGTTTACAACAAGAAAAAGGAGGGGGCAAATTTAAACAATATAATTTACAAAAAAGAGGGAAGCGGCAAAGCCGTGCTACCGATGCTGGTAAGGGGCGGGGAGGATSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
..................................................................................................................................................................ATATTGGCACATTATAATATTGGCAC.............................................................................................................................26201.05210210000
................................................................................................................................................................................TAATATTGGCACAACAAGTTCATTAGT..............................................................................................................27200.95197120000
...................................................................................................................................................................TATTGGCACATTATAATATTGGCAC.............................................................................................................................25200.80160160000
............................................................................................................................................................................................................................................................................................TACCGATGCTGGTAAGGGGC.........2030.672110000
...................................................................................................................................................................................................................TACAACAAGAAAAAGGAGGGG.................................................................................21200.60122100000
...................................................................................................................................................................................................................TACAACAAGAAAAAGGAGGGGGC...............................................................................23200.5511371000
................................................................................................................................................................................TAATATTGGCACAACAAGTTCATTAG...............................................................................................................26200.5010730000
.............................................................................................................................................................................TTATAATATTGGCACAACAAGTTCAT..................................................................................................................26200.408170000
..................................................................................................................................................................................................................TTACAACAAGAAAAAGGAGGG..................................................................................21200.357430000
...................................................................................................................................................................................TATTGGCACAACAAGTTCATTAGTC.............................................................................................................25200.357250000
........................................................................................................................................................................................................................................................TAATTTACAAAAAAGAGGGAAGCGG........................................2530.331000010
.........................................................TTATTTGTTGTATGTCAGTGCTTGT.......................................................................................................................................................................................................................................2530.331000010
...............................................................................................................................................................................................AAGTTCATTAGTCATTGGTTTACAA.................................................................................................2530.331100000
.....................................ATGTTTATATA----TGCTTTTATTTGTTGT.....................................................................................................................................................................................................................................................2730.331010000
.................................................................TGTATGTCAGTGCTTGTTAATGTT................................................................................................................................................................................................................................2430.331000010
..................................................................................................................................................................................................................TTACAACAAGAAAAAGGAGG...................................................................................20200.306131010
...........................................................................................................................................................................CATTATAATATTGGCACAACAAGTTC....................................................................................................................26200.255500000
...........................................................................................................................................................................CATTATAATATTGGCACAACAAGTTCAT..................................................................................................................28200.255230000
...........................................................ATTTGTTGTATGTCAGTGCTT.........................................................................................................................................................................................................................................21120.253120000
...................................................................................................................................................................................................................TACAACAAGAAAAAGGAGGGGGCA..............................................................................24200.255500000
...................................................................................................................................................................................................................TACAACAAGAAAAAGGAGGGGGCAAAT...........................................................................27200.204400000
................................................................................................................................................................................TAATATTGGCACAACAAGTTCATTAGTC.............................................................................................................28200.204310000
...................................................................................................................................................................................................................TACAACAAGAAAAAGGAGGGGGCAAA............................................................................26200.204310000
....................................................................................................................................................................................................................ACAACAAGAAAAAGGAGG...................................................................................18200.204040000
...................................................................................................................................................................................TATTGGCACAACAAGTTCATTAGT..............................................................................................................24200.204030010
..................................................................................................................................................................ATATTGGCACATTATAATATTGGCACA............................................................................................................................27200.204130000
...................................................................................................................................................................................................................TACAACAAGAAAAAGGAGGG..................................................................................20200.204100030
.....................................................................................................................................................................................................................CAACAAGAAAAAGGAGGGG.................................................................................19200.153120000
.................................................................................................................................................................TATATTGGCACATTATAATATTGGCAC.............................................................................................................................27200.153120000
...................................................................................................................................................................TATTGGCACATTATAATATTGGCACA............................................................................................................................26200.153030000
...................................................................................................................................................................................................................TACAACAAGAAAAAGGAGGGGG................................................................................22200.153030000
.................................................................................................................................................................................AATATTGGCACAACAAGTTCATTAGT..............................................................................................................26200.153120000
..................................................................................................................................................................................ATATTGGCACAACAAGTTCATTAGTC.............................................................................................................26200.153210000
.............................................................................................................................................................................TTATAATATTGGCACAACAAG.......................................................................................................................21200.153210000
....................................................................................................................................................................................................................ACAACAAGAAAAAGGAGGGG.................................................................................20200.153030000
.....................................................................................................................................................................TTGGCACATTATAATATTGGC...............................................................................................................................21200.153030000
..................................................................................................................................................................................................................TTACAACAAGAAAAAGGAGGGGG................................................................................23200.153300000
.........................................................................................TCACGTTTACAATT----------------------------------------------------------TATATTGGCAC.............................................................................................................................................25200.153030000
.................................................................................................................................................................................................................TTTACAACAAGAAAAAGGAGG...................................................................................21200.153210000
..............................................................................................................................................................................................................TGGTTTACAACAAGAAAAAGGAGGGG.................................................................................26200.102110000
....................................................................................................................................................................................................................ACAACAAGAAAAAGGAGGGGGC...............................................................................22200.102020000
.........................................................................................................................................................................CACATTATAATATTGGCACAACAAGT......................................................................................................................26200.102110000
.......................................................................................................................................................................GGCACATTATAATATTGGCAC.............................................................................................................................21200.102110000
..............................................................................................................................................................................................................TGGTTTACAACAAGAAAAAGGAGG...................................................................................24200.102110000
..........................................................................................CACGTTTACAATT----------------------------------------------------------TATATTGG................................................................................................................................................21200.102200000
................................................................................................................................................................................TAATATTGGCACAACAAGTTCATT.................................................................................................................24200.102110000
.................................................................................................................................................................................AATATTGGCACAACAAGTTCATTAG...............................................................................................................25200.102200000
.........................................................TTATTTGTTGTATGTCAGT.............................................................................................................................................................................................................................................19200.102000020
....................................................................................................................................................................................................................ACAACAAGAAAAAGGAGGGGG................................................................................21200.102020000
.......................................................................................................................................................................................................................ACAAGAAAAAGGAGGGGGCAA.............................................................................21200.102200000
...................................................................................................................................................................................................................TACAACAAGAAAAAGGAGGGGGCAAATT..........................................................................28200.102200000
......................................................................................................................................................................................................................AACAAGAAAAAGGAGGGGGCA..............................................................................21200.102110000
..............................................................................................................................................................................................................TGGTTTACAACAAGAAAAAGGAGGGGG................................................................................27200.102110000
.................................................................................................................................................................................................................TTTACAACAAGAAAAAGGAGGGG.................................................................................23200.102200000
...........................................................................................ACGTTTACAATT----------------------------------------------------------TATATTGGCAC.............................................................................................................................................23200.102110000
.....................................................................................TGTTTCACGTTTACAATT----------------------------------------------------------TATATTGGCA..............................................................................................................................................28200.102200000
......................................................................................................T----------------------------------------------------------TATATTGGCACATTATAATATTGGC...............................................................................................................................26200.102020000
...........................................................................................ACGTTTACAATT----------------------------------------------------------TATATTGGCACA............................................................................................................................................24200.102200000
..................................................................................................................................................................................................................TTACAACAAGAAAAAGGAGGGG.................................................................................22200.102200000
..........................................................TATTTGTTGTATGTCAGTGCT..........................................................................................................................................................................................................................................21120.081100000
............................................................TTTGTTGTATGTCAGTGCT..........................................................................................................................................................................................................................................19120.081000100
..........................................................TATTTGTTGTATGTCAGTGCTT.........................................................................................................................................................................................................................................22120.081000001
............................................................TTTGTTGTATGTCAGTGCTT.........................................................................................................................................................................................................................................20120.081100000
...............................................................................................TTACAATT----------------------------------------------------------TATATTGGCACA............................................................................................................................................20200.051100000
...................................................................................................................................................................TATTGGCACATTATAATATT..................................................................................................................................20200.051010000
.................................................................................................................................................................................AATATTGGCACAACAAGTTCATTA................................................................................................................24200.051100000
......................................................................................................................................................................TGGCACATTATAATATTGGC...............................................................................................................................20200.051010000
................................................................................................................................................................................TAATATTGGCACAACAAGTTCATTT................................................................................................................25200.051100000
....................................................................................................................................................................................................................ACAACAAGAAAAAGGAGGGT.................................................................................20200.051010000
.....................................................................................................TT----------------------------------------------------------TATATTGGCACATTATAATATTGGC...............................................................................................................................27200.051010000
...............................................................................................................................................................................ATAATATTGGCACAACAAGTT.....................................................................................................................21200.051100000
......................................................................................................................................................................................................................AACAAGAAAAAGGAGGGGGCAAATT..........................................................................25200.051100000
...................................................................................................................................................................................................................TACAACAAGAAAAAGGAGGGGGCAA.............................................................................25200.051010000
.....................................................................................................................................................................TTGGCACATTATAATATTGGCAC.............................................................................................................................23200.051010000
..................................................................................................................................................................ATATTGGCACATTATAATATTGGC...............................................................................................................................24200.051010000
...................................................................................................................................................................................................................TACAACAAGAAAAAGGAGGGGGCAAG............................................................................26200.051100000
..............................................................................................................................................................................................................TGGTTTACAACAAGAAAAAGGAGGG..................................................................................25200.051001000
............................................................................................................................................................................ATTATAATATTGGCACAACAAG.......................................................................................................................22200.051100000
.......................................................................................................................................................................GGCACATTATAATATTGGCACAACAAG.......................................................................................................................27200.051010000
.......................................................TTTTATTTGTTGTATGTCAGT.............................................................................................................................................................................................................................................21200.051000100
.............................................................................................................................................................................TTATAATATTGGCACAACAAGTTCATTAG...............................................................................................................29200.051100000
.........................................................................................TCACGTTTACAATT----------------------------------------------------------TATATTGGCACAC...........................................................................................................................................27200.051010000
.......................................................................................................................................................................GGCACATTATAATATTGGCA..............................................................................................................................20200.051100000
................................................................................................................................................................................TAATATTGGCACAACAAGTTCATTA................................................................................................................25200.051100000
...............................................................................................................................................................................................................................................TAAACAATATAATTTACAAAAAAGAGG...............................................27200.051010000
..........................................................................................................................................................................................................................AGAAAAAGGAGGGGGCAAATTTA........................................................................23200.051010000
..........................................................................................................................................................................................................................AGAAAAAGGAGGGGGCAAATTTAAAC.....................................................................26200.051010000
...................................................................................................................................................................................TATTGGCACAACAAGTTCATTAGTT.............................................................................................................25200.051010000
..................................................................................................................................................................................ATATTGGCACAACAAGTTCATTAGT..............................................................................................................25200.051010000
................................................................................................................................................................................TAATATTGGCACAACAAGTTCATTAGC..............................................................................................................27200.051010000
....................................................................................................................................................................................ATTGGCACAACAAGTTCATTAGC..............................................................................................................23200.051010000
...............................................................................................................................................................................................................GGTTTACAACAAGAAAAAGGAGGGG.................................................................................25200.051000010
.....................................................................................................................................................................................................................CAACAAGAAAAAGGAGGGGGCC..............................................................................22200.051010000
......................................................................................................................................................................TGGCACATTATAATATTGGCACAACAAG.......................................................................................................................28200.051100000
.................................................................................................................................................................................................................TTTACAACAAGAAAAAGGAGGGGGC...............................................................................25200.051010000
................................................................................................................................................................................................................GTTTACAACAAGAAAAAGGAG....................................................................................21200.051100000
...................................................................................................................................................................................TATTGGCACAACAAGTTC....................................................................................................................18200.051010000
..............................................................................................................................................................................TATAATATTGGCACAACAAGTTCATTAGT..............................................................................................................29200.051100000
....................................................................................................................................................................ATTGGCACATTATAATATTGGCAC.............................................................................................................................24200.051100000
..................................................................................................................................................................................ATATTGGCACAACAAGTTCAT..................................................................................................................21200.051010000
.................................................................................................................................................................................................................TTTACAACAAGAAAAAGGAGGG..................................................................................22200.051010000
..............................................................................................................................................................................TATAATATTGGCACAACAAGTTCATTAG...............................................................................................................28200.051100000
................................................................................................................................................................................TAATATTGGCACAACAAGTTC....................................................................................................................21200.051100000
....................................................................................................................................................................................................................ACAACAAGAAAAAGGAGGGGGCAAA............................................................................25200.051100000
................................................................................................TACAATT----------------------------------------------------------TATATTGGCACATT..........................................................................................................................................21200.051100000
......................................................................................................T----------------------------------------------------------TATATTGGCACATTATAATATTGGCA..............................................................................................................................27200.051100000
......................................................................................................................................................................................................................AACAAGAAAAAGGAGGGGGC...............................................................................20200.051010000
...............................................................................................TTACAATT----------------------------------------------------------TATATTGGCACATTATAAT.....................................................................................................................................27200.051010000
.........................................................................................................................................................................................CACAACAAGTTCATTAGTCA............................................................................................................20200.051100000
...................................................................................................................................................................................TATTGGCACAACAAGTTCATTAGC..............................................................................................................24200.051010000
..........................................................................................CACGTTTACAATT----------------------------------------------------------TATATTGGCACA............................................................................................................................................25200.051010000
........................................................................................TTCACGTTTACAATT----------------------------------------------------------TATATTGGCACAT...........................................................................................................................................28200.051100000
....................................................................................................................................................................ATTGGCACATTATAATATTGG................................................................................................................................21200.051100000
.................................................................................................ACAATT----------------------------------------------------------TATATTGGCACATTA.........................................................................................................................................21200.051010000
........................................................................................TTCACGTTTACAATT----------------------------------------------------------TATATTGGCACA............................................................................................................................................27200.051100000
..........................................................................................................................................................................ACATTATAATATTGGCACA............................................................................................................................19200.051100000
.......................................................................................TTTCACGTTTACAATT----------------------------------------------------------TATATTGGCACAC...........................................................................................................................................29200.051100000
.................................................................................................................................................................................AATATTGGCACAACAAGTTCAC..................................................................................................................22200.051010000
...................................................................................................................................................................................TATTGGCACAACAAGTTCATTAGTCA............................................................................................................26200.051100000
.........................................................................................TCACGTTTACAATT----------------------------------------------------------TATATTGGCACA............................................................................................................................................26200.051100000
.................................................................................................ACAATT----------------------------------------------------------TATATTGGCACATTATAAT.....................................................................................................................................25200.051010000
..................................................................................................................................................................................ATATTGGCACAACAAGTTCATTAGTCA............................................................................................................27200.051010000
.....................................................................................................TT----------------------------------------------------------TATATTGGCACATTATAATATTGGCAC.............................................................................................................................29200.051010000
...........................................................................................ACGTTTACAATT----------------------------------------------------------TATATTGGCACATTA.........................................................................................................................................27200.051100000
......................................................................................................T----------------------------------------------------------TATATTGGCACATTATAATATTGGCAC.............................................................................................................................28200.051010000
...........................................................................................ACGTTTACAATT----------------------------------------------------------TATATTGGCACATT..........................................................................................................................................26200.051100000
..................................................................................................................................................................................ATATTGGCACAACAAGTTCATTAGC..............................................................................................................25200.051010000
....................................................................................................................................................................................ATTGGCACAACAAGTTCATTAGT..............................................................................................................23200.051010000
.......................................................................................................................................................................................................................ACAAGAAAAAGGAGGGGGCTT.............................................................................21200.051010000
.................................................................................................................................................................................................................TTTACAACAAGAAAAAGGAGGGGG................................................................................24200.051010000
.........................................................................................................................................................................CACATTATAATATTGGCACAACAAG.......................................................................................................................25200.051100000
...........................................................................................................................................................................................................................GAAAAAGGAGGGGGCAAATTTAAACA....................................................................26200.051100000
.................................................................................................................................................................................AATATTGGCACAACAAGTTCATTAGTC.............................................................................................................27200.051100000
.............................................................................................................................................................................................................................AAAAGGAGGGGGCAAATTTAAACAAT..................................................................26200.051010000
......................................................................................................T----------------------------------------------------------TATATTGGCACATTATAATATTGGCACA............................................................................................................................29200.051100000
................................................................................................TACAATT----------------------------------------------------------TATATTGGCACATTATAATATT..................................................................................................................................29200.051100000
..............................................................................................TTTACAATT----------------------------------------------------------TATATTGGCACATTATAA......................................................................................................................................27200.051100000
..................................................................................................................................................................................................................TTACAACAAGAAAAAGGAGGGGGC...............................................................................24200.051010000
............................................................................................................................................................................ATTATAATATTGGCACAACAAGTTCAT..................................................................................................................27200.051010000
...........................................................................................................................................................................CATTATAATATTGGCACAACA.........................................................................................................................21200.051100000
........................................................................................TTCACGTTTACAATT----------------------------------------------------------TATATTGGCAC.............................................................................................................................................26200.051010000
........................................................................................................................................................................................................................CAAGAAAAAGGAGGGGGCAA.............................................................................20200.051100000
..........................................................................................................................................................................ACATTATAATATTGGCACAA...........................................................................................................................20200.051010000
........................................................................................................................................................................................................................CAAGAAAAAGGAGGGGGCAAATTTA........................................................................25200.051100000
...................................................................................................................................................................................TATTGGCACAACAAGTTCATTAG...............................................................................................................23200.051100000
..............................................................................................................................................................................................................TGGTTTACAACAAGAAAAAGGAG....................................................................................23200.051001000
......................................................................................................................................................................................TGGCACAACAAGTTCATTAGT..............................................................................................................21200.051001000
.......................................................................................................................................................................................................................ACAAGAAAAAGGAGGGGGCAAATT..........................................................................24200.051100000
.....................................................................................TGTTTCACGTTTACAATT----------------------------------------------------------TATATTGGCAC.............................................................................................................................................29200.051100000
..................................................................................................CAATT----------------------------------------------------------TATATTGGCACATTATAATAT...................................................................................................................................26200.051010000
...............................................................................................................................................................................ATAATATTGGCACAACAAGTTCATTAGT..............................................................................................................28200.051100000
...........................................................................................................................................................................CATTATAATATTGGCACAACAAGTTCA...................................................................................................................27200.051010000
......................................................................................................................................................................................................................................................TATAATTTACAAAAAAGAGGGA.............................................22200.051010000
...................................................................................................................................................................TATTGGCACATTATAATATTGGCACAAC..........................................................................................................................28200.051100000
.............................................................................................................................................................................................................................................TTTAAACAATATAATTTACAAAAAAGAGG...............................................29200.051010000
.................................................................................................................................................................................................................................................AACAATATAATTTACAAAAAAGAGGG..............................................26200.051010000
................................................................................................TACAATT----------------------------------------------------------TATATTGGCACATTATAATA....................................................................................................................................27200.051010000
......................................................................................................................................................................TGGCACATTATAATATTGGCAC.............................................................................................................................22200.051010000
............................................................................................................................................................................ATTATAATATTGGCACAACAAGTTCAC..................................................................................................................27200.051010000
droBip1
GATGAGATACGGATGTGTTT-------------------------------------------------------------------------------------------------------------------T---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
TGTTTTTT-------------TTT---GTATATGTGTATGTTTATACATACATACATATGTATGTAAG-------------------------------------------------------------------T---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
dm3
TTTTTATA-------ATTATTTCTTTAAATTCTGAATATGTTTCAATG----TCTTTTAATTTGATG--------------------------------------------------------------------TTTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.......................TTTAAATTCTGAATATGTTTCAAT..........................................................................................................................................................................................................................................................................24101.401400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001210100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................TAAATTCTGAATATGTTTCAAT..........................................................................................................................................................................................................................................................................22100.9090000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001006200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................TAAATTCTGAATATGTTTCAATG----T....................................................................................................................................................................................................................................................................2490.8980000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000103400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................TAAATTCTGAATATGTTTCAATG----TC...................................................................................................................................................................................................................................................................2590.8980000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000002000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
.......................TTTAAATTCTGAATATGTTTCAATG----T....................................................................................................................................................................................................................................................................2690.7870000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................TTCTTTAAATTCTGAATATGTTTC.............................................................................................................................................................................................................................................................................24110.5560000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000101000000000000000000000000000000021000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................TTAAATTCTGAATATGTTTCAATG----T....................................................................................................................................................................................................................................................................2590.4440000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................TTCTTTAAATTCTGAATATGTTTCAATG----.....................................................................................................................................................................................................................................................................2890.3330000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000001010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....TATA-------ATTATTTCTTTAAATTCTGAAT....................................................................................................................................................................................................................................................................................26120.3340000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................TTTAAATTCTGAATATGT................................................................................................................................................................................................................................................................................18120.3340000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................TAAATTCTGAATATGTTT..............................................................................................................................................................................................................................................................................18120.3340000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001010200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................TTAAATTCTGAATATGTTTCAAT..........................................................................................................................................................................................................................................................................23100.3030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................TTCTTTAAATTCTGAATATGTTTCAA...........................................................................................................................................................................................................................................................................26100.3030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................TTTCTTTAAATTCTGAATATGTTTCAAT..........................................................................................................................................................................................................................................................................28100.3030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................TGTTTCAATG----TCTTTTAATTTGATG--------------------------------------------------------------------..................................................................................................................................................................................25200.2550000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000
....................TTCTTTAAATTCTGAATATG.................................................................................................................................................................................................................................................................................20120.2530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.......................TTTAAATTCTGAATATGTT...............................................................................................................................................................................................................................................................................19120.2530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................TTAAATTCTGAATATGTTT..............................................................................................................................................................................................................................................................................19120.2530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................TATTTCTTTAAATTCTGAATATGTT...............................................................................................................................................................................................................................................................................25120.2530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................TATTTCTTTAAATTCTGAA.....................................................................................................................................................................................................................................................................................19170.2440000000000000000000000000000000000000000000000000000000000000000000000000000021100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................TTAAATTCTGAATATGTTTCAATG----TCT..................................................................................................................................................................................................................................................................2790.2220000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................TTTAAATTCTGAATATGTTTCAATG----TC...................................................................................................................................................................................................................................................................2790.2220000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................TTTAAATTCTGAATATGTTTCAATG----.....................................................................................................................................................................................................................................................................2590.2220000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................TGTTTCAATG----TCTTTTAATTTGATG--------------------------------------------------------------------T.................................................................................................................................................................................26200.2040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................TGTTTCAATG----TCTTTTAATTTGATG--------------------------------------------------------------------TT................................................................................................................................................................................27200.2040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.........................TAAATTCTGAATATGTTTC.............................................................................................................................................................................................................................................................................19110.1820000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................TTATTTCTTTAAATTCTGAAT....................................................................................................................................................................................................................................................................................21170.1830000000000000000000000000000000000000000000000000000000000000000000000000000020010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................TTATTTCTTTAAATTCTGA......................................................................................................................................................................................................................................................................................19170.1830000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................TTAAATTCTGAATATGTT...............................................................................................................................................................................................................................................................................18120.1720000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................TTCTTTAAATTCTGAATATGT................................................................................................................................................................................................................................................................................21120.1720000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................TATGTTTCAATG----TCTTTTAATTTGA........................................................................................................................................................................................................................................................25200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......A-------ATTATTTCTTTAAATTCTGA......................................................................................................................................................................................................................................................................................21170.1220000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................TATTTCTTTAAATTCTGAAT....................................................................................................................................................................................................................................................................................20170.1220000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............ATTATTTCTTTAAATTCTGAA.....................................................................................................................................................................................................................................................................................21170.1220000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................TTCTGAATATGTTTCAATG----TCTTT................................................................................................................................................................................................................................................................2490.1110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................TTAAATTCTGAATATGTTTCAATG----TC...................................................................................................................................................................................................................................................................2690.1110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................TATTTCTTTAAATTCTGA......................................................................................................................................................................................................................................................................................18180.1120000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................AAATTCTGAATATGTTTCAATG----T....................................................................................................................................................................................................................................................................2390.1110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................TGAATATGTTTCAATG----TCTTTTAAT............................................................................................................................................................................................................................................................2590.1110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................TAAATTCTGAATATGTTTCAATG----TCT..................................................................................................................................................................................................................................................................2690.1110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................TCTGAATATGTTTCAATG----TCTTTTAA.............................................................................................................................................................................................................................................................2690.1110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................TTCTGAATATGTTTCAATG----TCTTTTA..............................................................................................................................................................................................................................................................2690.1110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................CTGAATATGTTTCAATG----TCTT.................................................................................................................................................................................................................................................................2190.1110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
................................TGAATATGTTTCAATG----TCTTT................................................................................................................................................................................................................................................................2190.1110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................TCTTTAAATTCTGAATATGTTTCAAT..........................................................................................................................................................................................................................................................................26100.1010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................TATGTTTCAATG----TCTTTTAATTTGATG--------------------------------------------------------------------T.................................................................................................................................................................................28200.1020000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................AATATGTTTCAATG----TCTTTTA..............................................................................................................................................................................................................................................................21200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000
...................TTTCTTTAAATTCTGAATATGTTTC.............................................................................................................................................................................................................................................................................25110.0910000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................TTCTTTAAATTCTGAATATGTTTCAC...........................................................................................................................................................................................................................................................................26110.0910000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................TCTTTAAATTCTGAATATGTTTC.............................................................................................................................................................................................................................................................................23110.0910000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................TATTTCTTTAAATTCTGAATATGTTTC.............................................................................................................................................................................................................................................................................27110.0910000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......TA-------ATTATTTCTTTAAATTCTGAATA...................................................................................................................................................................................................................................................................................25120.0810000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................TCTTTAAATTCTGAATATGTT...............................................................................................................................................................................................................................................................................21120.0810000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......TA-------ATTATTTCTTTAAATTCTGA......................................................................................................................................................................................................................................................................................22120.0810000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.TTTTATA-------ATTATTTCTTTAAATTCTGA......................................................................................................................................................................................................................................................................................27120.0810000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......TA-------ATTATTTCTTTAAATTCTGAATATGT................................................................................................................................................................................................................................................................................28120.0810000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....TATA-------ATTATTTCTTTAAATTCTGAATA...................................................................................................................................................................................................................................................................................27120.0810000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................TTCTTTAAATTCTGAATATGTTT..............................................................................................................................................................................................................................................................................23120.0810000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................TTATTTCTTTAAATTCTGAATATGT................................................................................................................................................................................................................................................................................25120.0810000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................TTTCTTTAAATTCTGAATATGTTT..............................................................................................................................................................................................................................................................................24120.0810000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................ATTTCTTTAAATTCTGAATATGTT...............................................................................................................................................................................................................................................................................24120.0810000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................TTTAAATTCTGAATATG.................................................................................................................................................................................................................................................................................17120.0810000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................TATTTCTTTAAATTCTGAATATGT................................................................................................................................................................................................................................................................................24120.0810000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......A-------ATTATTTCTTTAAATTCTGAA.....................................................................................................................................................................................................................................................................................22170.0610000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................TATTTCTTTAAATTCTGAATA...................................................................................................................................................................................................................................................................................21170.0610000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................TTCTTTAAATTCTGAATA...................................................................................................................................................................................................................................................................................18180.0610000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................TATGTTTCAATG----TCTTTTAATTTGATG--------------------------------------------------------------------..................................................................................................................................................................................27200.0510000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................TGTTTCAATG----TCTTTTAATTTGATG--------------------------------------------------------------------TTT...............................................................................................................................................................................28200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................TGTTTCAATG----TCTTTTAATTTGA........................................................................................................................................................................................................................................................23200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................TATGTTTCAATG----TCTTTTAATTTGATT--------------------------------------------------------------------..................................................................................................................................................................................27200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................TG----TCTTTTAATTTGATG--------------------------------------------------------------------TC................................................................................................................................................................................19200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................TGTTTCAATG----TCTTTTAATTT..........................................................................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
....................................TATGTTTCAATG----TCTTTTAATTT..........................................................................................................................................................................................................................................................23200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................TGTTTCAATG----TCTTTTAATT...........................................................................................................................................................................................................................................................20200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................ATGTTTCAATG----TCTTTTAATTTGATG--------------------------------------------------------------------..................................................................................................................................................................................26200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSec2
GAGTAGGTTTTTTTTTTTTT-----------------------------------------------------------TTTTTTTTTTCCATTTTCAACGTCTGGTGACGTTGTCATTTTATTGTCCTCTGATTTTTGCTTAAAATATATAGTGACAATTTG---TGGCAAATTACATTTTCGG--------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
........................................................................................................................TATTGTCCTCTGATTTTTGCTTAAAA.......................................................................................................................................................................26200.601212000
..............................................................................................................................................................ATTTG---TGGCAAATTACATTTTCGG--------------------------------------------------------------------------------------------------------------------------------24200.2555000
........................................................................................................................TATTGTCCTCTGATTTTTGCTTAAA........................................................................................................................................................................25200.2555000
..................................................................................................................................................TATATAGTGACAATTTG---TGGCAAAT...........................................................................................................................................25200.2553020
.......................................................................................................................TTATTGTCCTCTGATTTTTGCTT...........................................................................................................................................................................23200.2552021
........................................................................................................................TATTGTCCTCTGATTTTTGCTTAA.........................................................................................................................................................................24200.1533000
........................................................................................................................TATTGTCCTCTGATTTTTGCTTAAAAT......................................................................................................................................................................2770.1411000
......................................................................................................CTGGTGACGTTGTCATTTTATT.............................................................................................................................................................................................2290.1110100
........................................................................................................................TATTGTCCTCTGATTTTTGCTT...........................................................................................................................................................................22200.1020020
.........................................................................................................................ATTGTCCTCTGATTTTTGCTTA..........................................................................................................................................................................22200.1022000
........................................................................................................................TATTGTCCTCTGATTTTTGCTTA..........................................................................................................................................................................23200.1021010
......................................................................................................................TTTATTGTCCTCTGATTTTTGCTT...........................................................................................................................................................................24200.1020020
.....................................................................................................................................................ATAGTGACAATTTG---TGGC...............................................................................................................................................18200.0510010
....................................................................................................................................................TATAGTGACAATTTG---TGGCAAATTA.........................................................................................................................................25200.0511000
.......................................................................................................................TTATTGTCCTCTGATTTTTGCT............................................................................................................................................................................22200.0511000
........................................................................................................................TATTGTCCTCTGATTTTTGT.............................................................................................................................................................................20200.0510010
..................................................................................................................................................TATATAGTGACAATTTG---TGGCAAATT..........................................................................................................................................26200.0511000
.........................................................................................................................ATTGTCCTCTGATTTTTGCTTAAAA.......................................................................................................................................................................25200.0511000
.......................................................................................................................TTATTGTCCTCTGATTTTTGCTTA..........................................................................................................................................................................24200.0511000
....................................................................................................................................................TATAGTGACAATTTG---TGGC...............................................................................................................................................19200.0511000
..................................................................................................................................................TATATAGTGACAATTTG---TGAA...............................................................................................................................................21200.0510010
...............................................................................................................................................AAATATATAGTGACAATTTG---TGTTT..............................................................................................................................................25200.0510001
.......................................................................................................................TTATTGTCCTCTGATTTTTGC.............................................................................................................................................................................21200.0511000
droVir3
TTTTCATT-----------------ATATTTGTATTTCTATTTGTATT----TGTTTTTGTTTTTGGTTTTTCTGTTATTTTTTTTTTTTCATTTTTGGCATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
No Reads
droMoj3
TTTTTT---------------TTTGTAATTTTTATTTTTTTCTTTTTT----TGTATTAATTTGCTG--------------------------------------------------------------------T---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads

Generated: 05/18/2015 at 02:49 AM