ID:

dan_1628

Coordinate:

scaffold_13250:3478600-3478750 +

Confidence:

Candidate

Type:

Unknown

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-4.7 -4.4 -4.4

Flybase annnotation

CDS [Dana\GF13004-cds]; exon [dana_GLEANR_1302:3]; intron [Dana\GF13004-in]

Repeatable elements

NameClassFamilyStrand
Helitron-2N1_DVirRCHelitron+
Hoana1DNAhAT-hobo-
mature
  1. dan_1628  scaffold_13250:3478665-3478685 +
  2. scaffold_13266:18696337-18696357 +
star
  1. scaffold_1272:17-44 +
  2. scaffold_3721:623-650 +
  3. scaffold_7064:4344-4371 +
  4. scaffold_8785:1512-1539 +
  5. scaffold_12911:87365-87392 +
  6. scaffold_12948:410279-410306 +
  7. scaffold_13010:235477-235504 +
  8. scaffold_13034:1082131-1082158 +
  9. scaffold_13077:272312-272339 -
  10. scaffold_13089:663495-663522 -
  11. scaffold_13099:2402517-2402544 -
  12. scaffold_13111:620961-620988 +
  13. scaffold_13137:147291-147318 +
  14. dan_1628  scaffold_13250:3478703-3478730 +
  15. scaffold_13260:1903763-1903790 -
  16. scaffold_13260:2001873-2001900 -
  17. scaffold_13337:21577367-21577394 -
  18. scaffold_13339:3364146-3364173 +
  19. scaffold_13417:6085813-6085840 +
  20. scaffold_13417:6759739-6759766 +

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
AGACAAAGTGCCCAACAAATAGTCGCGGTCAAGAATGCTCAGAACGTGGCGTAAGTAAATTATAAGTCAATACCTTTTATACTCTTGCAGAGGGTATTATAATTTTAGTCGAAAGTGTGCAACGCAGTGAAGAAGTCATCTCCGACCCTATAAATTATATATATTCTTGATCAGGATCACCTCCTGAGTCGTTATAAGCATGTCCGTTTGTACGTCTGTCTGTCTGTTTTTACGCAAACTAGTCACTCAGT
*******************************************************************************************************************((((...))))((((....(((......)))..................((((....)))))))).**********************************************************************
Read size # Mismatch Hit Count Total Norm Total V106
head
M058
embryo
V039
embryo
V055
head
V105
male body
M044
female body
..........................GGTCAAGAATGCTCAGAACGTGGCGTT...................................................................................................................................................................................................... 27 1 1 3.00 3 3 0 0 0 0 0
AGACAAAGTGCCCAACAAATAGTCGC................................................................................................................................................................................................................................. 26 0 1 1.00 1 0 1 0 0 0 0
...........................................................TTATAAGTCAATAGCCGTTAT........................................................................................................................................................................... 21 3 2 0.50 1 0 0 0 1 0 0
...................................................................................................................TGTGCAACGCAGTGAAGAAGT................................................................................................................... 21 0 2 0.50 1 0 0 1 0 0 0
.........................................................................................................................................................ATTATATATATTCTTGATCAGGATCACC...................................................................... 28 0 20 0.35 7 0 7 0 0 0 0
.................................................................................................................................................................................CACCTCCTGAGTCGTTATAAGCATGTC............................................... 27 0 4 0.25 1 0 0 0 0 0 1
..................................................................................................ATAATTTTAGGCGAAAGGG...................................................................................................................................... 19 2 4 0.25 1 0 0 0 0 1 0
...............................................................................................................................................................TATATTCTTGATCAGGATCACCTCCT.................................................................. 26 0 20 0.25 5 0 5 0 0 0 0
.........................................................................................................................................................ATCATATATATTCTTGATCAGGATCACC...................................................................... 28 1 20 0.10 2 0 2 0 0 0 0
................................................................................................................................................................ATATTCTTGATCAGGATCACCTC.................................................................... 23 0 20 0.10 2 0 0 2 0 0 0
.........................................................................................................................................................ATTTTATATATTCTTGATCAGGATCACC...................................................................... 28 1 20 0.05 1 0 1 0 0 0 0
.........................................................................................................................................................ATTTTATCTATTCTTGATCAGGATCACC...................................................................... 28 2 20 0.05 1 0 1 0 0 0 0
......................................................................................GCAGAGGGTTTTATAATTTTAGTC............................................................................................................................................. 24 1 20 0.05 1 0 0 0 0 1 0
.......................................................................................................................................................AAATTATATATATTCTTGATCAGGAT.......................................................................... 26 0 20 0.05 1 0 1 0 0 0 0
...................................................................................CTTGCAGAGGGTATTATAATTTTAGTC............................................................................................................................................. 27 0 20 0.05 1 0 0 0 0 1 0
.............................................................................................................CGAAAGTGTGCAACGCAGTGAAG....................................................................................................................... 23 0 20 0.05 1 0 1 0 0 0 0

Anti-sense strand reads

TCTGTTTCACGGGTTGTTTATCAGCGCCAGTTCTTACGAGTCTTGCACCGCATTCATTTAATATTCAGTTATGGAAAATATGAGAACGTCTCCCATAATATTAAAATCAGCTTTCACACGTTGCGTCACTTCTTCAGTAGAGGCTGGGATATTTAATATATATAAGAACTAGTCCTAGTGGAGGACTCAGCAATATTCGTACAGGCAAACATGCAGACAGACAGACAAAAATGCGTTTGATCAGTGAGTCA
**********************************************************************((((...))))((((....(((......)))..................((((....)))))))).*******************************************************************************************************************
Read size # Mismatch Hit Count Total Norm Total M058
embryo
V055
head
V039
embryo
M044
female body
V105
male body
..............................................................AGCCAGTTATGGAAAATATTA........................................................................................................................................................................ 21 3 6 0.17 1 0 1 0 0 0
..............................................................................................................................................................................CTAGTGGAGGACTCAGCAATA........................................................ 21 0 9 0.11 1 1 0 0 0 0
............................................................................................................................................................................TCCTAGTGGAGGACTCAGCAA.......................................................... 21 0 11 0.09 1 0 0 0 1 0
........................................................................................................................................GTAGAGGCTGGGATATTTAATATAT.......................................................................................... 25 0 18 0.06 1 1 0 0 0 0
...........................................................................................................................CTTCACTACTTCAGTAAAGGC........................................................................................................... 21 3 18 0.06 1 0 0 1 0 0
...........................................................................................................................................................................................................AGAAAACATGCAGACAGA.............................. 18 2 19 0.05 1 0 0 1 0 0
...........................................................................................................................................GAGGCTGGGATATTTAATATA........................................................................................... 21 0 19 0.05 1 0 1 0 0 0
.......................................................................................GTCTCCCATAATATTAAAATC............................................................................................................................................... 21 0 20 0.05 1 0 0 0 0 1
.............................................................................................................................................GGCTGGGATATTTAATATATA......................................................................................... 21 0 20 0.05 1 1 0 0 0 0
..........................................................................................................................................AGAGGCTGGGATATTTAAT.............................................................................................. 19 0 20 0.05 1 1 0 0 0 0
..........................................................................................................................................AGAGGCTGGGCTATTTAATATATAT........................................................................................ 25 1 20 0.05 1 1 0 0 0 0
..........................................................................................................................................AGAGGCTGGGAAATTTAATATATAT........................................................................................ 25 1 20 0.05 1 1 0 0 0 0
........................................................................................................................................GTAGAGGCTGGGATATTTAAT.............................................................................................. 21 0 20 0.05 1 0 1 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droAna3 scaffold_13250:3478550-3478800 + dan_1628 AG-AC-AAAGT--GCCCAA----CAAATAGTCG----------------------------------------------------CGGTCA-----------------------------------------------------------------------AGAATGCTCAGAACGT-----------GGCGTAAGTAA---------ATT--AT--AA------GTCAA---------------TAC-CTTTTATACTCTT-----G--CA-G------AGGGTATTATAATTTTAGTCG-------AAAGT-GTGCAACGCAGTGAAGAAGTCATCT-CCGACCCTATAAATTATATATATTCTTGATCAGGATCACCTCCTGAGTCGTTATAAGCATGTCCGTTTGTACGTCTGTCTGTCTG----T----TTTTACGCAAACTAGTCACTCAGT-
droBip1 scf7180000395138:68941-69186 + CG-AA-TAGGT--CTGCAA----TAA-C-------------GAGT-----------------------------------------------------------------------------------------------------------------TG-ACGAAGGCCG------------AG-GGC-----------TTTTC-----GAAATT--ACTTTTTAAT------------------CAG-TTTTTATTCCCTT-----G--CA-G------AGGGTATTATAATTTTGTCCA-------AAAGT-GTGCAACGCAGTGAAGGAGACATCT-CCGACCCTATAAAGTATATATATTCTTGATCAGGATCACCTCCTGAGTTGATATGAGCATGTCCGTCTGTCCGTCTGTCTGTCTGTCTGT----TTCTACGCGAACTAGTCTCTCAGT-
droKik1 scf7180000301803:10543-10793 - AA-AA-T------GCTTAA----ATAATAATTA-----TAT-----------------------------------------------AAA--AGATAACAAAAA--AAATGCTT--AAATA---------------------------------------------ATAA------------TAAAGC-----------AA-AC-----A-----------------------------------TAT-TCATTATACCCTT-----G--C---------AGGGTATTATAATTTCAGTCA-------GAAGTTTTGCAACGCAAGGAAGGAGACCTTT-CCGACCCTATAAAGTATATATATTCTTGATTAGCATCAACAGCCGAGTCGATCTAGCCATGTCCGTCTGTCCATCTGTCTGCCTGTCTGT----TTCTACGCAAACTAGTCCCTCAGT-
droFic1 scf7180000451924:1468-1717 - AG-AT-AAGTT--ATAC-------AAAATATCTCGATA----AAT-TGTGACCAGTATAAAAAAGGACCCAC------------------------------------------------------------------------------------------------------------------------------------------------------T------T---------------GACG-TTTTAATACCCTT-----G--CA-GGTCAAAAGGGTATTATAATTTCAGTCA-------GAAGT-TTGCAACGCAGTGAAGGAGACACCT-TGGACCCCTTAAAGTATATATATTCTTGATCAGCATCACCATCTGAATCGAAATATGTATGTACGTCTGTCCGTCGGTCCGTCTGTCTGT----TTCTATGTAAACTAGTCTCTCAGT-
droEle1 scf7180000491218:12965-13216 - GG-AC-AACAA--TAACAT----ATAGCTCCCA-----TAG---------------------------------G-------AAC-AAT-----------------------------------------------------------------------C-GGAAAAA--------TGAAGG-----------AAAAAA---------ATT--AT--ACCTT------T---------------GCTG-TTTTTATACCCTT-----G--CA-G------AGGGTATTATGATTTCAGTCA-------GAAGT-TTGCAACGCAGTGAAGGAGACGTTT-CCGACCCTATAAAGTATATATATTCTTGATCAGCATCACTAGGCGAGTCGATCTAGCCATGTCCGTCTGTCCGTCAGTCTGTCCGTCCGT----TTCTACGCAAACTAGTCTCTCAGT-
droRho1 scf7180000776864:531-783 + AG-AA-AACGT--GCA--G-----CATAA---------------------------------------------AATAAAAC---TGAAGT----------------------ATGC-----------------------------------AA---ATTT-AGAAATG--------TACATC-----------AAACAA---------TTT--AA--AA--------------------------GTT-TTTTTATACCCTT-----G--CA-G------AGGGTATTATAATTTTGGTCA-------AAAGT-GTGCAACGCAGTGAAGGAGACATCT-CCGACCCTATAAAGTATATATATTCTTGATCAGGATCACCTCCTGAGTTGATATAGCCATGTCCGTCTGTTCGTCTGTCCGTCTGTCTGT----TTCTACGCAAACTAGTCTCTCAGT-
droBia1 scf7180000301523:15615-15879 - GG-AC-AACTT--TATCAT----ATAGCTGTCA-----TAG---------------------------------G-------AAC-GAT-----------------------------------------------------------------------C-GGAAAA---------------------GGCGTA-GAAG---------GTT--AT--AT------GTTAAAAAACACCAGAGATTTTA-TTTTTATACCCTT-----G--CA-G------AGGGTATAATAATTTCAGTCA-------GAAGT-TTGCAACGCAATGAAGACGACGTTTGCCGACTCCATAAAGTATTTATATTCATGATCAGCGTCACTAGACGAGTAGATCTAGCCATGTCCGTCTGTCCGTCCGTCTGTCTGTCCGT----TTCTACGCAAACTAGTCTCTCAGT-
droTak1 scf7180000410693:6977-7225 + AG-AA-AATGT--GGA--C-------------------------------------------------CCACTAAGTTGTCT---TGGGTT-----------------------------------------------------------------------ATGAGATTTAAAGCAA-----------AACATAG--AA---------ACT--CT--AA------AT-----------------CATA-TTTTTATACCCTT-----G--CA-G------AGGGTATTATGATTTCAGTCA-------GAAGT-TTGCAACGCAGTGAAGGAGATGTTT-CCGACCCCATAAAGTATATATATTCTTGATCAGCATCACTAGACGAGTCGATCTAGCCATGTCCGTCTGTCCGTCTGTCCGTCCG----T----TTCTACGCAAACTAGTCTCTCAGT-
droEug1 scf7180000409672:473548-473786 - AA-AA-AT-----CCCCAA----AAG-TAA-----------ATTC-------------------------------TTGTCT---TG-----------ACAGA----------------------------------------------------------AAGAAAGCTA------------AGTTTC-----------AA-------ATT--AT--AT--TTC--C------------------CAA-TTTTTATACCCGTTACTCG--TAG-AGTAAAAGGGTATACTAGATTCGTTGA-------AAAGT-ATGTAACAGATAGAAGGAAGCTTTT-GTGACCCTATAAAGTATATATATTCTTGATCAGGATCAATAGCGAAGTCGATTGAGCCATGTCCGTCTGTCCGTCCGTCCGTCCGTCCGT----CCG----------------------
dm3 chrX:18737258-18737457 - TG-TACAATAT--GCTCAAAAG-TTAAAAATGCTCATA----GA-TG--------------------------------------------------------------GCGCCA--AAATA----------------------------------------------A--------------TA---------------------------------AG--------------------------GGC-TTATTATACCCGTTACTCG--TAG-AGTAAAAGGGTATACTAGACTCGTTGA-------AGAGT-AAGTAAC----------AGTCGTTT-CCGACTGTATAGAGTATATATATTCTTGATCAGGATCAATAGCCAAGTCGATCTAGCCATGCCCGTATGTATGT---------------------------------------------
droSim2 3l:17833127-17833363 - AG-AC-AAATA--GCTG-------AACAAATCA-----TATAAGC-----------------------------------------------------------------------------------------------------------------T-C-AGACAGCTG------------AGTGGC-----------AATTC-----TTAT--------------------------------TCA-TTTTAATACCCGTTACTCT--TAG-AGTGAAGGGGTATACTAGATTCGTTGA-------AGAGT-ACGTAACAGGTAAAAGGAAGTGTTT-CCGACCATATAAAGTATATATATTATTAATCAGGAACAATATCCAAGTCGTTCTGGCCATTTCCGTCTGTCTGTATGAACATCTC-------------------ACATCTCAGGAACTA
droSec2 scaffold_30:162415-162655 + AG-AC-AAATA--GCTG-------AACAAATCA-----TACAAGC-----------------------------------------------------------------------------------------------------------------T-C-AGACAGCTG------------AGTGGC-----------AATTC-----TTAT--------------------------------TCA-TTTTAATACCCGTTACTCT--TAG-AGTAAAGGGGTATACTAGGTTCGTTGA-------AGAGT-ACGTAACAGGTAAAAGGAAGTGTTT-CCGACCATATAAAGTATATATATTATTAATCAGGAACAATATCCAAGTCGTTCTGGCCATTTCCGTCTGTCTGTATGAACGTCTC----A----TCTC------ACATCTCAGGAACT-
droYak3 v2_chrUn_554:53344-53581 - AA-AG-CCA------CCAC----GAAAAAATCG-----TG-----------------------------------------------TGCA-----------------------------------------------------------------------AAAAAATCG------------TATGGC-----------GTTAC-----GCATC-------T------T---------------GTTA-TTCTAATGTCTTT-----G--G-----TAAAAGGGTATACTAGATTCGTTGA-------AAAGT-ATGTAACAGGCAGAAGGAAGCGTTT-CCGACCATATAAAGTATATATATTCTTGATCAGGATCAGTAGCCGAGTCGATCTGGCCATGTCCGTCTGTCCGTCCGTTTGTCCG----T----ATGAACGTCGAGATCTCAGAAACT-
droEre2 scaffold_4845:16095410-16095653 - AC-GT-A--TT--GGCTGA---CAG-A-----------TGC---------------------------------A-------GA-CGGTCA-----------------------------------------------------------------------GCGGGATACAAAAAGA-----------AACA----------------ATA--AT--AA------AT-----------------AATATTTATAATACCCGTTACTCG--TAG-AGTAAAAGGGTATACTAGATGCGTTGA-------AGAGT-ATGTAACAGGGAGAAGAAAGCGTTT-CCGACCGTATAAAGTATACATATTCTTGATCAGGATCAATAGCCGATTCGATCTGGTCATGTCTGTTTGTCCGTTCGTCTGTCTGTCCGT----CCGTA--TGAACTA-----------
dp5 XL_group1a:222996-223230 + CG-GT-CCGAAGTATT--------------------------------------------------------------------------------------------------------------------------------------------------------CGG------------CGCGAC-----------GTTAC-----TCATTT--AC------GTTGA---------------ACA-TTTTTATACTCAA-----A--ATG-AGTATTGGGGTATATTAGATTTGTGGTGAAAGTGGATGT-GTGTAACGTCCAGAAGGAATCGTTT-CCGACCCTATAAAGTATATATATTCTTGATCAGCATCAATAGCCGAGTCGATTGAGCCATGTCTGTCTGTCCGTCTGTCCGTCCC----C----TTCAGCGCCTAATGCTCAAAGACT-
droPer2 scaffold_5782:152-397 + AA-GT-G-------CCGTA---CAG-TT---------------------------------------------CAG---------TGGTCAGTGAATGACAAGAATTTAGTGCAG--ATATA----------------------------------------------T---------TTGGG-----------AAAAG-A--------GGT--A-------------------------------TGT-TTTTTATACCCGATACTCAAAATG-AGTATTGGGGTATATTAGATTTGTGGTAAAAGTGGATGT-GTGTAACGTCCAGAAGGAATCGTTT-CCGACCCTATAAAGTATATATATTCTTGATCAGCATCAATAGCCGAGTCGATTGAGCCCTGTCTGTCTGTCCGTCTGTCCGTCCGT---------------------------------
droWil2 scf2_1100000010066:531-775 + AAGAA-AACGA--GTGCAG----CAAATAATCT----------------------------------------------------TATGCA--AG-------A-------------------------------------------------AAAAGATA-GAGAAAACAA------------AGCAGC-----------G-------------------------AT------------------CAA-TTTTTATACCCTT-----G--CA-----AAAAGGGTATATTAATTTTGGTCA-------AAAGT-GTGCAACGCATAGAAGGAAGCATCT-CCGACCATATAAAGTATATATATTCTTGATCAGCACGACGAGACGAGTTCAAATAGCCATGTCCGTCCGTCCGTCCGTCCGTCTG----G----ATCAACGCAAACTCCTCCTAGACC-
droVir3 scaffold_10231:1216-1485 - TG-AA-T--GT--ACTCAA----CAAA-AG---------------TA--------------------------------------------------------------GCGGTT--AAGTGAAAATAATAAATTGAAATATATTTTTTTAT----------AGTAACCTA---ACGT-----------GT-AAAACTTA---------ATT--ATATAT--------------------------ATA-TTTTTATACCCTT-----G--CA-G------AGGGTATTATAATTTTGTCGT-------GAAAT-GTGCAACGCATAGAAGGAGACATCT-CCGACCCCATAAAGTATATATATTCTTAATCAGCATCAACAGCCGAGTCGATATAGCCATGTCCGTCTGTCCGTCTGTCTGT------------TTCTATGCGAACTAGCC-CTCAGT-
droMoj3 scaffold_6680:23996483-23996735 - AG-AG-AAACT--CA---C----ACA------------CACACACTG-----------------------------------------C---------------------------------------------------------------------------CAAGCTC------------AGCTGC-----------AATGCTCACTAT--GG--GA--------------------------ACT-TAATTATACCCTGAACCCA--TTG-AAAATCAGGGTATAATGGTTTTGTT-A-------AAAGT-ATGTAACAGGCAGAAGGAGGCGTGG-CAGACCCCACAAACTATATATATTCTTGATCAGGGCGACGAGCTGAGTCGATTTGGTCCTGTCCGTCTGTCCGTCCGTCCGTCCGTCCGTATGTATGAACGCGTCGATCTCAGAAGGT-
droGri2 scaffold_15110:18661177-18661433 - CA-AG-GC-----GCTCAC----AGAGCAATCA-----CAGAAACTG--------------------------------------------------------------GCGCTG--ACGTCAC-------------------------------------------GGTA---------AGT-----------AAAAG----GC-----AT--AT--GC--------------------------ATT-TTTTTATACCCTCAACCAA--GTGGGTAAAAAGGGTATAATGGTTTTGTTCA-------AATGT-ATGTAACAGGCAGAAGGAATCATCT-TCGACCCCATAAAACATATATATTCTTGATCACGGTCAACAGTCGAGTCGATATAGCCATGTCCGTCTGTCCGTCCGTCCGTCTGT--------ATGAACACGCAGATCTCAGAGACT-

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droAna3
AG-AC-AAAGT--GCCCAA----CAAATAGTCG----------------------------------------------------CGGTCA-----------------------------------------------------------------------AGAATGCTCAGAACGT-----------GGCGTAAGTAA---------ATT--AT--AA------GTCAA---------------TAC-CTTTTATACTCTT-----G--CA-G------AGGGTATTATAATTTTAGTCG-------AAAGT-GTGCAACGCAGTGAAGAAGTCATCT-CCGACCCTATAAATTATATATATTCTTGATCAGGATCACCTCCTGAGTCGTTATAAGCATGTCCGTTTGTACGTCTGTCTGTCTG----T----TTTTACGCAAACTAGTCACTCAGT-SizeHit CountTotal NormTotalM044
Female-body
M058
Embryo
V039
Embryo
V055
Head
V105
Male-body
V106
Head
......................................................................................GGTCA-----------------------------------------------------------------------AGAATGCTCAGAACGT-----------GGCGTT.........................................................................................................................................................................................................................................................................2713.003000003
AG-AC-AAAGT--GCCCAA----CAAATAGTCG----------------------------------------------------C......................................................................................................................................................................................................................................................................................................................................................................................2611.001010000
.........................................................................................................................................................................................................................................................................................................................T-GTGCAACGCAGTGAAGAAGT.............................................................................................................................2120.501001000
.................................................................................................................................................................................................................................................................................................................................................................ATTATATATATTCTTGATCAGGATCACC...............................................................................28200.357070000
.........................................................................................................................................................................................................................................................................................................................................................................................CACCTCCTGAGTCGTTATAAGCATGTC........................................................2740.251100000
.......................................................................................................................................................................................................................................................................................................................................................................TATATTCTTGATCAGGATCACCTCCT...........................................................................26200.255050000
........................................................................................................................................................................................................................................................................................................................................................................ATATTCTTGATCAGGATCACCTC.............................................................................23200.102002000
...............................................................................................................................................................................................................................................................................................................................................................AAATTATATATATTCTTGATCAGGAT...................................................................................26200.051010000
....................................................................................................................................................................................................................................................................CTT-----G--CA-G------AGGGTATTATAATTTTAGTC...............................................................................................................................................................27200.051000010
............................................................................................................................................................................................................................................................................................................CG-------AAAGT-GTGCAACGCAGTGAAG.................................................................................................................................23200.051010000
droBip1
CG-AA-TAGGT--CTGCAA----TAA-C-------------GAGT-----------------------------------------------------------------------------------------------------------------TG-ACGAAGGCCG------------AG-GGC-----------TTTTC-----GAAATT--ACTTTTTAAT------------------CAG-TTTTTATTCCCTT-----G--CA-G------AGGGTATTATAATTTTGTCCA-------AAAGT-GTGCAACGCAGTGAAGGAGACATCT-CCGACCCTATAAAGTATATATATTCTTGATCAGGATCACCTCCTGAGTTGATATGAGCATGTCCGTCTGTCCGTCTGTCTGTCTGTCTGT----TTCTACGCGAACTAGTCTCTCAGT-SizeHit CountTotal NormTotal
No Reads
droKik1
AA-AA-T------GCTTAA----ATAATAATTA-----TAT-----------------------------------------------AAA--AGATAACAAAAA--AAATGCTT--AAATA---------------------------------------------ATAA------------TAAAGC-----------AA-AC-----A-----------------------------------TAT-TCATTATACCCTT-----G--C---------AGGGTATTATAATTTCAGTCA-------GAAGTTTTGCAACGCAAGGAAGGAGACCTTT-CCGACCCTATAAAGTATATATATTCTTGATTAGCATCAACAGCCGAGTCGATCTAGCCATGTCCGTCTGTCCATCTGTCTGCCTGTCTGT----TTCTACGCAAACTAGTCCCTCAGT-SizeHit CountTotal NormTotal
No Reads
droFic1
AG-AT-AAGTT--ATAC-------AAAATATCTCGATA----AAT-TGTGACCAGTATAAAAAAGGACCCAC------------------------------------------------------------------------------------------------------------------------------------------------------T------T---------------GACG-TTTTAATACCCTT-----G--CA-GGTCAAAAGGGTATTATAATTTCAGTCA-------GAAGT-TTGCAACGCAGTGAAGGAGACACCT-TGGACCCCTTAAAGTATATATATTCTTGATCAGCATCACCATCTGAATCGAAATATGTATGTACGTCTGTCCGTCGGTCCGTCTGTCTGT----TTCTATGTAAACTAGTCTCTCAGT-SizeHit CountTotal NormTotal
No Reads
droEle1
GG-AC-AACAA--TAACAT----ATAGCTCCCA-----TAG---------------------------------G-------AAC-AAT-----------------------------------------------------------------------C-GGAAAAA--------TGAAGG-----------AAAAAA---------ATT--AT--ACCTT------T---------------GCTG-TTTTTATACCCTT-----G--CA-G------AGGGTATTATGATTTCAGTCA-------GAAGT-TTGCAACGCAGTGAAGGAGACGTTT-CCGACCCTATAAAGTATATATATTCTTGATCAGCATCACTAGGCGAGTCGATCTAGCCATGTCCGTCTGTCCGTCAGTCTGTCCGTCCGT----TTCTACGCAAACTAGTCTCTCAGT-SizeHit CountTotal NormTotal
No Reads
droRho1
AG-AA-AACGT--GCA--G-----CATAA---------------------------------------------AATAAAAC---TGAAGT----------------------ATGC-----------------------------------AA---ATTT-AGAAATG--------TACATC-----------AAACAA---------TTT--AA--AA--------------------------GTT-TTTTTATACCCTT-----G--CA-G------AGGGTATTATAATTTTGGTCA-------AAAGT-GTGCAACGCAGTGAAGGAGACATCT-CCGACCCTATAAAGTATATATATTCTTGATCAGGATCACCTCCTGAGTTGATATAGCCATGTCCGTCTGTTCGTCTGTCCGTCTGTCTGT----TTCTACGCAAACTAGTCTCTCAGT-SizeHit CountTotal NormTotal
No Reads
droBia1
GG-AC-AACTT--TATCAT----ATAGCTGTCA-----TAG---------------------------------G-------AAC-GAT-----------------------------------------------------------------------C-GGAAAA---------------------GGCGTA-GAAG---------GTT--AT--AT------GTTAAAAAACACCAGAGATTTTA-TTTTTATACCCTT-----G--CA-G------AGGGTATAATAATTTCAGTCA-------GAAGT-TTGCAACGCAATGAAGACGACGTTTGCCGACTCCATAAAGTATTTATATTCATGATCAGCGTCACTAGACGAGTAGATCTAGCCATGTCCGTCTGTCCGTCCGTCTGTCTGTCCGT----TTCTACGCAAACTAGTCTCTCAGT-SizeHit CountTotal NormTotal
No Reads
droTak1
AG-AA-AATGT--GGA--C-------------------------------------------------CCACTAAGTTGTCT---TGGGTT-----------------------------------------------------------------------ATGAGATTTAAAGCAA-----------AACATAG--AA---------ACT--CT--AA------AT-----------------CATA-TTTTTATACCCTT-----G--CA-G------AGGGTATTATGATTTCAGTCA-------GAAGT-TTGCAACGCAGTGAAGGAGATGTTT-CCGACCCCATAAAGTATATATATTCTTGATCAGCATCACTAGACGAGTCGATCTAGCCATGTCCGTCTGTCCGTCTGTCCGTCCG----T----TTCTACGCAAACTAGTCTCTCAGT-SizeHit CountTotal NormTotal
No Reads
droEug1
AA-AA-AT-----CCCCAA----AAG-TAA-----------ATTC-------------------------------TTGTCT---TG-----------ACAGA----------------------------------------------------------AAGAAAGCTA------------AGTTTC-----------AA-------ATT--AT--AT--TTC--C------------------CAA-TTTTTATACCCGTTACTCG--TAG-AGTAAAAGGGTATACTAGATTCGTTGA-------AAAGT-ATGTAACAGATAGAAGGAAGCTTTT-GTGACCCTATAAAGTATATATATTCTTGATCAGGATCAATAGCGAAGTCGATTGAGCCATGTCCGTCTGTCCGTCCGTCCGTCCGTCCGT----CCG----------------------SizeHit CountTotal NormTotal
No Reads
dm3
TG-TACAATAT--GCTCAAAAG-TTAAAAATGCTCATA----GA-TG--------------------------------------------------------------GCGCCA--AAATA----------------------------------------------A--------------TA---------------------------------AG--------------------------GGC-TTATTATACCCGTTACTCG--TAG-AGTAAAAGGGTATACTAGACTCGTTGA-------AGAGT-AAGTAAC----------AGTCGTTT-CCGACTGTATAGAGTATATATATTCTTGATCAGGATCAATAGCCAAGTCGATCTAGCCATGCCCGTATGTATGT---------------------------------------------SizeHit CountTotal NormTotalGSM154618
Ovary
GSM154620
Ovary
GSM154621
Ovary
GSM154622
Ovary
GSM180328
Head
GSM180329
Mixed-body
GSM180330
Embryo
GSM180331
Embryo
GSM180332
Embryo
GSM180333
Embryo
GSM180334
Larvae
GSM180335
Disc
GSM180336
Pupae
GSM180337
S2
GSM231091
Ovary
GSM239041
Head
GSM239050
Head
GSM239051
S2
GSM239052
S2
GSM246084
Head
GSM266765
S2
GSM280082
Ovary
GSM280083
Ovary
GSM280084
Ovary
GSM280085
Testis
GSM280086
Ovary
GSM280087
S2-NP
GSM280088
S2-NP
GSM312995
Head
GSM313160
Head
GSM313161
Head
GSM313162
Head
GSM313163
Head
GSM313164
Head
GSM313165
Head
GSM343287
Embryo
GSM379050
Ovary
GSM379051
Ovary
GSM379052
Ovary
GSM379053
Ovary
GSM379054
Ovary
GSM379055
Ovary
GSM379056
Ovary
GSM379057
Ovary
GSM379058
Ovary
GSM379059
Ovary
GSM379060
Ovary
GSM379061
Ovary
GSM379062
Ovary
GSM379063
Ovary
GSM379064
Ovary
GSM379065
Ovary
GSM379066
Ovary
GSM379067
Ovary
GSM424739
S2
GSM424740
S2
GSM424741
S2
GSM467729
Female-body
GSM467730
Female-body
GSM467731
Female-body
M002
CS
M003
Male-body
M004
Male-body
M005
ML-DmD32
M006
ML-DmD32
M029
OSC
M030
OSC
M031
OSC
M032
S2-R+
M033
S2-R+
M034
S2-R+
M035
S2-R+
M036
S2-R+
M037
S2-R+
M038
S2-R+
M039
S2-R+
M048
S2-R+
OSS2
OSS
OSS6
OSS
OSS7
OSS
OSS8
OSS
S1
Head
S10
Embryo
S11
Embryo
S12
Embryo
S13
Embryo
S14
Embryo
S15
S2-GMR
S16
Kc
S17
Larvae
S18
Larvae
S19
Pupae
S2
Head
S20
Pupae
S21
Disc
S22
Head
S23
Female-body
S24
Male-body
S25
Larvae
S26
Larvae
S27
Pupae
S28
Pupae
S29
Head
S3
Male-body
S30
S2-GMR
S31
S2
S32
S2
S33
Kc
S34
Kc
S35
Kc
S4
Female-body
S5
Disc
S6
Embryo
S7
Embryo
S8
S2
S9
Embryo
SRR001337
Head
SRR001338
Head
SRR001339
Head
SRR001340
Head
SRR001341
Head
SRR001342
Head
SRR001343
Head
SRR001344
Head
SRR001345
Head
SRR001346
Head
SRR001347
Head
SRR001348
Head
SRR001349
Head
SRR001664
Head
SRR010951
Ovary
SRR010952
Ovary
SRR010953
Ovary
SRR010954
Ovary
SRR010955
Ovary
SRR010956
Ovary
SRR010957
Ovary
SRR010958
Ovary
SRR010959
Ovary
SRR010960
Ovary
SRR014268
Embryo
SRR014269
Embryo
SRR014270
Embryo
SRR014271
Embryo
SRR014272
Embryo
SRR014273
Ovary
SRR014274
Ovary
SRR014275
Ovary
SRR014276
Ovary
SRR014277
Ovary
SRR014278
Ovary
SRR014279
Ovary
SRR014280
Ovary
SRR014281
Ovary
SRR014282
Ovary
SRR023197
S2
SRR023399
S2
SRR023400
S2
SRR023402
S2
SRR023407
S2
SRR029028
S2
SRR029029
S2
SRR029030
S2
SRR029031
S2
SRR029032
S2
SRR029033
S2
SRR029608
Head
SRR029633
Head
SRR030145
gb3
SRR031692
Head
SRR031693
Head
SRR031694
Head
SRR031696
Head
SRR031697
Head
SRR031698
Head
SRR031699
Head
SRR031700
Head
SRR031701
Head
SRR031702
Head
SRR031703
Head
SRR031704
Head
SRR032092
S2
SRR032093
S2
SRR032094
S2
SRR032095
S2-NP
SRR032096
S2-NP
SRR032152
Head
SRR060643
Testis
SRR060644
Ovary
SRR060645
Testis
SRR060646
Ovary
SRR060647
Ovary
SRR060648
Ovary
SRR060649
Ovary
SRR060650
Testis
SRR060651
Ovary
SRR060652
Testis
SRR060653
Ovary
SRR065151
Ovary
SRR065152
Ovary
SRR065153
Ovary
SRR065154
Ovary
SRR065155
Ovary
SRR065800
Ovary
SRR065801
Ovary
SRR065802
Ovary
SRR065803
Ovary
SRR065804
Ovary
SRR065805
Ovary
SRR065806
Ovary
SRR065807
Ovary
SRR097865
S2-NP
SRR097866
S2-NP
SRR097867
S2-NP
SRR298536
Ovary
SRR298537
Ovary
SRR298711
Ovary
SRR298712
Ovary
SRR317110
Ovary
SRR317111
Ovary
SRR317112
Ovary
SRR317113
Ovary
SRR317114
Ovary
SRR317115
Ovary
SRR317116
Ovary
SRR317117
Ovary
SRR341115
S2
SRR341116
S2
SRR341117
S2
SRR341118
S2
SRR351332
Mixed-body
SRR351333
Mixed-body
T004
OSC
T005
CME-L1
V001
Embryo
V002
Embryo
V003
S2
V006
Female-body
V007
Head
V008
S2
V009
CME-L1
V010
ML-DmD20-C5
V011
Sg4
V012
Male-body
V013
Head
V014
DTT
V015
DreRFHV
V018
Kc167
V019
GM2
V020
S2-R+
V021
ML-DmD21
V022
ML-DmD32
V023
Head
V024
Kc167
V025
S2-R+
V026
1182-2H
V027
ML-DmD21
V028
CME-W1-Cl.8+
V029
ML-DmD9
V030
ML-DmD8
V031
GM2
V032
S1
V033
CME-W1-Cl.8+
V034
ML-DmD16-C3
V035
ML-DmD32
V036
ML-DmD20-C5
V037
S2
V038
S2
V063
Ovary
V0632
Ovary
V064
Ovary
V0642
Ovary
V065
Ovary
V0652
Ovary
V066
Ovary
V0662
Ovary
V067
S2-NP
V073
mbn2
V074
S3
V075
ML-DmBG1-C1
V076
ML-DmBG3-C2
V077
Head
V078
Head
V079
Head
V080
Head
V081
Embryo
V082
Embryo
V083
Male-body
V084
Female-body
V085
CME-W2
V086
Female-body
V088
Ovary
V0882
Ovary
V089
Ovary
V0892
Ovary
V090
Male-body
V091
fGS/OSS
V092
Male-body
V093
Male-body
V094
S2-R+
V095
S2-R+
V096
Ovary
V097
Ovary
V098
Ovary
V125
ML-DmD9
V126
CME-L1
V127
G2
V128
S3
V129
ML-DmBG1-C1
V130
ML-DmBG3-C2
V131
ML-DmD16-C3
V132
ML-DmD32
V133
Sg4
V134
ML-DmD8
V135
CME-W2
V136
Male-body
V137
Head
V138
Male-body
V139
Female-body
V140
Female-body
V141
Female-body
V142
Female-body
V144
OSC
V145
S2
V146
S1
V147
1182-2H
V148
mbn2
GSM1528798
follicle cells
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.........................................................................................................................................................................................................................................................................................................................................................................TATTCTTGATCAGGATCAATAGC............................................................................23200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................TCG--TAG-AGTAAAAGGGTATACT.........................................................................................................................................................................22200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................ATATATATTCTTGATCAGGAT...................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................G--TAG-AGTAAAAGGGTATACTA........................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................CAGGATCAATAGCCAAGTC......................................................................19200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
AG-AC-AAATA--GCTG-------AACAAATCA-----TATAAGC-----------------------------------------------------------------------------------------------------------------T-C-AGACAGCTG------------AGTGGC-----------AATTC-----TTAT--------------------------------TCA-TTTTAATACCCGTTACTCT--TAG-AGTGAAGGGGTATACTAGATTCGTTGA-------AGAGT-ACGTAACAGGTAAAAGGAAGTGTTT-CCGACCATATAAAGTATATATATTATTAATCAGGAACAATATCCAAGTCGTTCTGGCCATTTCCGTCTGTCTGTATGAACATCTC-------------------ACATCTCAGGAACTASizeHit CountTotal NormTotalM023
Head
M024
Male-body
M025
Embryo
M053
Female-body
O001
Testis
O002
Head
SRR553485
Ovary
SRR553486
Ovary
SRR553487
Ovary
SRR553488
Ovary
SRR618934
Ovary
V044
Embryo
SRR902008
Ovary
SRR902009
Testis
SRR1275487
Male larvae
SRR1275485
Male prepupae
SRR1275483
Male prepupae
.......................................................................................................................................................................................................................................................................................AAGGGGTATACTAGATTCGTTGA-------A......................................................................................................................................................2460.33200000020000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................ACATCTCAGGAACTA1550.20100000000001000000
........................................................................................................................................................................................................................................................................................AGGGGTATACTAGATTCGTTGA-------A......................................................................................................................................................2360.17100000010000000000
.......................................................................................................................................................................................................................................................................................AAGGGGTATACTAGATTCGTTGA-------.......................................................................................................................................................2360.17100000000000010000
........................................................................................................................................................................................................................................................................................AGGGGTATACTAGATTCGTTG...............................................................................................................................................................2170.14100000000000010000
.......................................................................................................................................................................................................................................................................................AAGGGGTATACTAGATTCGTTG...............................................................................................................................................................2270.14100000000001000000
..................................................................................................................................................................................................................................................................................................................................................................................................................TCCGTCTGTCTGTATGAACAT.....................................2180.13100000000100000000
.......................................................................................................................................................................................................................................................................................AAGGGGTATACTAGATTCGTTT...............................................................................................................................................................22110.09100000000000010000
droSec2
AG-AC-AAATA--GCTG-------AACAAATCA-----TACAAGC-----------------------------------------------------------------------------------------------------------------T-C-AGACAGCTG------------AGTGGC-----------AATTC-----TTAT--------------------------------TCA-TTTTAATACCCGTTACTCT--TAG-AGTAAAGGGGTATACTAGGTTCGTTGA-------AGAGT-ACGTAACAGGTAAAAGGAAGTGTTT-CCGACCATATAAAGTATATATATTATTAATCAGGAACAATATCCAAGTCGTTCTGGCCATTTCCGTCTGTCTGTATGAACGTCTC----A----TCTC------ACATCTCAGGAACT-SizeHit CountTotal NormTotalM054
Female-body
V113
Male-body
V114
Embryo
V115
Head
................................................................................................................................................................................................................................................................................................................................................GTTT-CCGACCATATAAAGT........................................................................................................19200.0510010
droYak3
AA-AG-CCA------CCAC----GAAAAAATCG-----TG-----------------------------------------------TGCA-----------------------------------------------------------------------AAAAAATCG------------TATGGC-----------GTTAC-----GCATC-------T------T---------------GTTA-TTCTAATGTCTTT-----G--G-----TAAAAGGGTATACTAGATTCGTTGA-------AAAGT-ATGTAACAGGCAGAAGGAAGCGTTT-CCGACCATATAAAGTATATATATTCTTGATCAGGATCAGTAGCCGAGTCGATCTGGCCATGTCCGTCTGTCCGTCCGTTTGTCCG----T----ATGAACGTCGAGATCTCAGAAACT-SizeHit CountTotal NormTotalM026
Head
M043
Female-body
M056
Embryo
V046
Embryo
V052
Head
V058
Head
V120
Male-body
SRR1275488
Male larvae
SRR1275486
Male prepupae
SRR1275484
Male prepupae
GSM1528802
follicle cells
...................................................................................................................................................................................................................CATC-------T------T---------------GTTA-TTCTAATGTCTTT-----G--G-----T......................................................................................................................................................................................26201.0521000000000021
.......................................................................................................................................................................................................................................................................................................TCGTTGA-------AAAGT-ATGTAACAGGCAGA...................................................................................................................................26200.9018018000000000
.............................................................................................................................................................................................................................................................................................................................................................................................AGCCGAGTCGATCTGGCCATGTCCGTC....................................................27200.30600600000000
.....................................................................................................................................................................................................................................T---------------GTTA-TTCTAATGTCTTT-----G--G-----TAAAAGG................................................................................................................................................................................2740.25101000000000
............................................................................................................................................................................................................................................................................................................................................................................TCTTGATCAGGATCAGTAGCCGAGTC......................................................................26200.15303000000000
.......................................................................................................................................................................................................................................................TA-TTCTAATGTCTTT-----G--G-----TAAAAGGG...............................................................................................................................................................................2580.13101000000000
.......................................................................................................................................................................................................................................................TA-TTCTAATGTCTTT-----G--G-----TAAAAGGGTA.............................................................................................................................................................................2780.13101000000000
.....................................................................................................................................................................................................................................T---------------GTTA-TTCTAATGTCTTT-----G--G-----TAA....................................................................................................................................................................................2380.13101000000000
...................................................................................................................................................................................................................................................................CTTT-----G--G-----TAAAAGGGTATACTAGATTCGT.................................................................................................................................................................2890.11100000010000
..............................................................................................................................................................................................................................................................................................................................................................................TTGATCAGGATCAGTAGCCGAGTC......................................................................24200.10202000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................TGGCCATGTCCGTCTGTCCGTCCGTT........................................26200.10202000000000
...................................................................................................................................................................................................................CATC-------T------T---------------GTTA-TTCTAATGTCTTT-----G--G-----TA.....................................................................................................................................................................................27200.10202000000000
.....................................................................................................................................................................................................................TC-------T------T---------------GTTA-TTCTAATGTCTTT-----G--G-----.......................................................................................................................................................................................23200.05101000000000
.......................................................................................TGCA-----------------------------------------------------------------------AAAAAATCG------------TATGGC-----------GTTAC-----GCATC-------..............................................................................................................................................................................................................................................29200.05100100000000
.....................................................................................................................................................................................................................TC-------T------T---------------GTTA-TTCTAATGTCTTT-----................................................................................................................................................................................................21200.05101000000000
............................AATCG-----TG-----------------------------------------------TGCA-----------------------------------------------------------------------AAAAAATCG------------TATGGC-----------....................................................................................................................................................................................................................................................................26200.05101000000000
...................................................................................................................................................................AAAAATCG------------TATGGC-----------GTTAC-----GCATC-------T------.......................................................................................................................................................................................................................................25200.05101000000000
.....................................................................................................................................................................................................................TC-------T------T---------------GTTA-TTCTAATGTCTTT-----G--G-----TA.....................................................................................................................................................................................25200.05101000000000
..............................TCG-----TG-----------------------------------------------TGCA-----------------------------------------------------------------------AAAAAATCG------------TATGGC-----------GT..................................................................................................................................................................................................................................................................26200.05100100000000
.................................................................................................................................................................................................................................................................................................................................................................................................GAGTCGATCTGGCCATGTCCGTCT...................................................24200.05100000010000
.............................................................................................................................................................................................................................................................................................................................................................................................................CCATGTCCGTCTGTCCGTCCGTT........................................23200.05100100000000
..............................................................................................................................................................................................................................................................................................................................................................................................................CATGTCCGTCTGTCCGTCCGTT........................................22200.05110000000000
droEre2
AC-GT-A--TT--GGCTGA---CAG-A-----------TGC---------------------------------A-------GA-CGGTCA-----------------------------------------------------------------------GCGGGATACAAAAAGA-----------AACA----------------ATA--AT--AA------AT-----------------AATATTTATAATACCCGTTACTCG--TAG-AGTAAAAGGGTATACTAGATGCGTTGA-------AGAGT-ATGTAACAGGGAGAAGAAAGCGTTT-CCGACCGTATAAAGTATACATATTCTTGATCAGGATCAATAGCCGATTCGATCTGGTCATGTCTGTTTGTCCGTTCGTCTGTCTGTCCGT----CCGTA--TGAACTA-----------SizeHit CountTotal NormTotalM055
Female-body
M057
Embryo
V060
Head
V040
Embryo
V107
Male-body
V108
Head
GSM1528801
follicle cells
.....................................................................................................................................................................................................................................................................................................................................................................TACATATTCTTGATCAGGATCAATAGC............................................................................27120.0811000000
dp5
CG-GT-CCGAAGTATT--------------------------------------------------------------------------------------------------------------------------------------------------------CGG------------CGCGAC-----------GTTAC-----TCATTT--AC------GTTGA---------------ACA-TTTTTATACTCAA-----A--ATG-AGTATTGGGGTATATTAGATTTGTGGTGAAAGTGGATGT-GTGTAACGTCCAGAAGGAATCGTTT-CCGACCCTATAAAGTATATATATTCTTGATCAGCATCAATAGCCGAGTCGATTGAGCCATGTCTGTCTGTCCGTCTGTCCGTCCC----C----TTCAGCGCCTAATGCTCAAAGACT-SizeHit CountTotal NormTotalM022
Male-body
M040
Female-body
M059
Embryo
M062
Head
V043
Embryo
V051
Head
V112
Male-body
SRR902010
Ovary
SRR902011
Testis
SRR902012
CNS imaginal disc
.......................................................................................................................................................................................................................................................................................................................................GAAGGAATCGTTT-CCGACCCTATAAAG.........................................................................................................27202.855705100000060
......................................................................................................................................................................................................................................................................................................................................................................................................................TCTGTCCGTCTGTCCGTCCC----C----.........................21202.354704520000000
.................................................................................................................................................................................................................................................................................................................................................................................................GAGTCGATTGAGCCATGTCTG......................................................21202.054104100000000
......................................................................................................................................................................................................................................................................................................TTTGTGGTGAAAGTGGAT....................................................................................................................................................18201.953903900000000
...............................................................................................................................................................................................................................................................................................................................................................................TGATCAGCATCAATAGCCGA.........................................................................20201.903803800000000
......................................................................................................................................................................................................................................................................................................TTTGTGGTGAAAGTGGATGT-GTGT.............................................................................................................................................24201.3527000000131400
.......................................................................................................................................................................................................................................................................................................................................GAAGGAATCGTTT-CCGACCCTATA............................................................................................................24201.152302300000000
.......................................................................................................................................................................................................................................................................................................................................GAAGGAATCGTTT-CCGACCCTATAA...........................................................................................................25201.052101920000000
....................................................................................................................................................................................................................................................................................................................................................................ATATATATTCTTGATCAGCAT...................................................................................21200.951901900000000
......................................................................................................................................................................................................................................................................................................TTTGTGGTGAAAGTGGATGT-GT...............................................................................................................................................22200.851700000000170
................................................................................................................................................................................................................................................................................................................................................................................................CGAGTCGATTGAGCCATGTCT.......................................................21200.551101000001000
....................................................................................................................................................................................................................................................................................................GATTTGTGGTGAAAGTGGATG...................................................................................................................................................21200.50100900010000
..........................................................................................................................................................................................................................................................................................................TGGTGAAAGTGGATGT-GTGTA............................................................................................................................................21200.501000000010000
.................................................................................................................................................................................................................................................................................................................AGTGGATGT-GTGTAACGTC.......................................................................................................................................19200.50100010009000
...............................................................................................................................................................................................................................................................................ATG-AGTATTGGGGTATATTAG.......................................................................................................................................................................21200.4590900000000
.......................................................................................................................................................................................................................................................................................................TTGTGGTGAAAGTGGATGT-G................................................................................................................................................20200.3570000100420
...................................................................................................................................................................................................................................................................................................AGATTTGTGGTGAAAGTGG......................................................................................................................................................19200.2550500000000
.............................................................................................................................................................................................................................................................................................................TGAAAGTGGATGT-GTGTAACG.........................................................................................................................................21200.2550000005000
................................................................................................................................................................................................................................................................................................................................................................................................................TGTCTGTCTGTCCGTCTGTCC.......................................21200.2550000005000
........................................................................................................................................................................................................................................................................................................................................................................................................................TGTCCGTCTGTCCGTCCC----C----TTCAGC...................25200.2550400000100
...............................................................................................................................................................................................................................................................................................TATTAGATTTGTGGTGAAAGT........................................................................................................................................................21200.2550000004010
................................................................................................................................................................................................................................................................................TG-AGTATTGGGGTATATTAG.......................................................................................................................................................................20200.2040400000000
........................................................................................................................................................................................................................................................................................................................................................................................................................TGTCCGTCTGTCCGTCCC----C----TTCAG....................24200.2040000000400
.......................................................................................................................................................................................................................................................................................................................TGT-GTGTAACGTCCAGAAGG................................................................................................................................20200.2040000040000
......................................................................................................................................................................................................................................................................................................TTTGTGGTGAAAGTGGATGT-GTG..............................................................................................................................................23200.2040040000000
.........................................................................................................................................................................................................................................................................................................GTGGTGAAAGTGGATGT-GTGT.............................................................................................................................................21200.2040000004000
.............................................................................................................................................................................................................................................................................................................................................................................................................CCATGTCTGTCTGTCCGTCT...........................................20200.1530000003000
............................................................................................................................................................................................................................................................................................................GTGAAAGTGGATGT-GTGTA............................................................................................................................................19200.1530000001020
..........................................................................................................................................................................................................................................................................................................................................................................................................GAGCCATGTCTGTCTGTCCGTCTG..........................................24200.1530000000300
...........................................................................................................................................................................................................................................................................................................................................................................................ATAGCCGAGTCGATTGAGCCA............................................................21200.1530000003000
.......................................................................................................................................................................................................................................................................................................................................................................................................ATTGAGCCATGTCTGTCTGTC................................................21200.1530000003000
......................................................................................................................................................................................................................................................................................ATTGGGGTATATTAGATTTGT.................................................................................................................................................................21200.1530000003000
..................................................................................................................................................................................................................................................................................................TAGATTTGTGGTGAAAGTGGAT....................................................................................................................................................22200.1530200001000
.............................................................................................................................................................................................................................................................................................................TGAAAGTGGATGT-GTGTAAC..........................................................................................................................................20200.1530000000030
............................................................................................................................................................................................................................................................................................................................................................................TCTTGATCAGCATCAATAGCCGAGTC......................................................................26200.1530300000000
.............................................................................................................................................................................................................................................................................................................TGAAAGTGGATGT-GTGTAACGTC.......................................................................................................................................23200.1530300000000
..................................................................................................................................................................................................................................................................................................TAGATTTGTGGTGAAAGTGGA.....................................................................................................................................................21200.1530000003000
.........................................................................................................................................................................................................................................................................................................................................................................................CAATAGCCGAGTCGATTGAG...............................................................20200.1530000000030
.....................................................................................................................................................................................................................................................................................................................................................................TATATATTCTTGATCAGCATC..................................................................................21200.1530000000030
.......................................................................................................................................................................................................................................................................................................................................................................................................................................CCC----C----TTCAGCGCCTAATGCTCA.......22200.1020200000000
............................................................................................................................................................................................................................................................................................................................................AATCGTTT-CCGACCCTATAAA..........................................................................................................21200.1020200000000
..............................................................................................................................................................................................................................................................................................................................................................................................................CATGTCTGTCTGTCCGTCTGTCCGTCCC----..............................28200.1020000000020
................................................................................................................................................................................................................................................................................................ATTAGATTTGTGGTGAAAGTG.......................................................................................................................................................21200.1020000100010
................................................................................................................................................................................................................................................................................................................................................................................................................TGTCTGTCTGTCCGTCTGTCCGT.....................................23200.1020200000000
............................................................................................................................................................................................................................................................................................................................................................................................................GCCATGTCTGTCTGTCCGTC............................................20200.1020200000000
.................................................................................................................................................................................................................................................................................................................................CGTCCAGAAGGAATCGTT.........................................................................................................................18200.1020200000000
.............................................................................................................................................................................................................................................................................................................................................................................................................CCATGTCTGTCTGTCCGTC............................................19200.1020000020000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCGCCTAATGCTCAAAGACT-21200.1020200000000
.....................................................................................................................................................................................................................................................................................................................................................................................................CGATTGAGCCATGTCTGTCTGTC................................................23200.1020000000020
..............................................................................................................................................................................................................................................................................................................GAAAGTGGATGT-GTGTAACGTCC......................................................................................................................................23200.1020200000000
............................................................................................................................................................................................................................................................................................................GTGAAAGTGGATGT-GTGTAACG.........................................................................................................................................22200.1020000000020
.........................................................................................................................................................................................................................................................................................................................................................................................................TGAGCCATGTCTGTCTGTCCGTCTGTCC.......................................28200.1020200000000
....................................................................................................................................................................................................................................................................................................................................................................................................................TGTCTGTCCGTCTGTCCGTCCC----C----.........................23200.1020200000000
........................................................................................................................................................................................................................................................................................................TGTGGTGAAAGTGGATGT-GTGT.............................................................................................................................................22200.1020000000200
..................................................................................................................................................................................................................................................................................................................................................................................................AGTCGATTGAGCCATGTCTGT.....................................................21200.1020000002000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCGCCTAATGCTCAAAGACT-22200.1020200000000
..............................................................................................................................................................................................................................................................................................................................................................................................GCCGAGTCGATTGAGCCATGTC........................................................22200.1020200000000
.......................................................................................................................................................................................................................................................................................................................................GAAGGAATCGTTT-CCGACCCTATAAAGT........................................................................................................28200.1020010000010
......................................................................................................................................................................................................................................................................................................TTTGTGGTGAAAGTGGATGT-GTGTA............................................................................................................................................25200.1020000000020
.........................................................................................................................................................................................................................................................................................................................................................................................................................GTCCGTCTGTCCGTCCC----C----T........................19200.1020200000000
.......................................................................................................................................................................................................................................................................................................................................GAAGGAATCGTTT-CCGACCCTATAAAGA........................................................................................................28200.1020100000100
......................................................................................................................................................................................................................................................................................................................................................................................................................TCTGTCCGTCTGTCCGTCCC----C----T........................22200.1020000000020
................................................................................................................................................................................................................................................................................................................................................................................................................TGTCTGTCTGTCCGTCTGTCCGTCCC----..............................26200.0510000001000
................................................................................................................................................................................................................................................................................TG-AGTATTGGGGTATATTAGATTTG..................................................................................................................................................................25200.0510010000000
..............................................................................................................................................................................................................................................................................................................................................................................................................CATGTCTGTCTGTCCGTC............................................18200.0510100000000
...........................................................................................................................................................................................................................................................................................................GGTGAAAGTGGATGT-GTGTA............................................................................................................................................20200.0510001000000
............................................................................................................................................................................................................................................................................................................................................................................................................................CGTCTGTCCGTCCC----C----TTCAG....................20200.0510000010000
.......................................................................................................................................................................................................................................................................................................................................................................................................ATTGAGCCATGTCTGTCTG..................................................19200.0510000001000
.............................................................................................................................................................................................................................................................................................TATATTAGATTTGTGGTGAAAGTGGA.....................................................................................................................................................26200.0510000000100
...............................................................................................................................................................................................................................................................................................................................................................................................CCGAGTCGATTGAGCCATGTC........................................................21200.0510100000000
..........................................................................................................................................................................................................................................................................................................................................................................................................GAGCCATGTCTGTCTGTCCGTCTGTCA.......................................27200.0510100000000
.........................................................................................................................................................................................................................................................................................................................................................................................CAATAGCCGAGTCGATTGAGC..............................................................21200.0511000000000
.......................................................................................................................................................................................................................................................................................................................................................................................ATCAATAGCCGAGTCGATTGAGCCA............................................................25200.0510000001000
..............................................................................................................................................................................................................................................................................................................................TAACGTCCAGAAGGAATCGTTT-CCGA...................................................................................................................26200.0510100000000
......................................................................................................................................................................................................................................................................................................TTTGTGGTGAAAGTGGATGT-GTGTAAC..........................................................................................................................................27200.0510010000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................GTCCC----C----TTCAGCGCCTAATGC..........21200.0510100000000
.....................................................................................................................................................................................................................................................................................................ATTTGTGGTGAAAGTGGATGT-GTG..............................................................................................................................................24200.0510100000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................TCTGTCCGTCCC----C----TTCAGCG..................20200.0510000000010
......................................................................................................................................................................................................................................................................................................TTTGTGGTGAAAGTGGATGT-GTGTAA...........................................................................................................................................26200.0510000000010
...............................................................................................................................................................................................................................................................................ATG-AGTATTGGGGTATATTAGATTTG..................................................................................................................................................................26200.0510100000000
..................................................................................................................................................................................................................................................................................................................................................................................................AGTCGATTGAGCCATGTCTGTCT...................................................23200.0510100000000
..............................................................................................................................................................................................................................................................................................................................................TCGTTT-CCGACCCTATAAAGTA.......................................................................................................22200.0510000000010
................................................................................................................................................................................................................................................................................................................................................................................................CGAGTCGATTGAGCCATGTCTGTCTG..................................................26200.0510100000000
..................................................................................................................................................................................................................................................................................................................................................................................................................TCTGTCTGTCCGTCTGTC........................................18200.0510100000000
........................................................................................................................................................................................................................................................................................TGGGGTATATTAGATTTGTGG...............................................................................................................................................................21200.0510000010000
.................................................................................................................................................................................................................................................................................................................................................................................................................GTCTGTCTGTCCGTCTGTC........................................19200.0510000001000
.......................................................................................................................................................................................................................................................................................................TTGTGGTGAAAGTGGATGT-GTGTAAC..........................................................................................................................................26200.0510000000100
........................................................................................................................................................................................................................................................................................................TGTGGTGAAAGTGGATGT-GTGTA............................................................................................................................................23200.0510000001000
.....................................................................................................................................................................................................................................................................................................ATTTGTGGTGAAAGTGGATGT-GT...............................................................................................................................................23200.0510000100000
.......................................................................................................................................................................................................................................................................................................................................................................................................................CTGTCCGTCTGTCCGTCCC----C----TT.......................22200.0510100000000
........................................................................................................................................................................................................................................................................................................................................................................................................................TGTCCGTCTGTCCGTCCC----C----TTC......................22200.0510100000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................CC----C----TTCAGCGCCTAATGCTCA.......21200.0510100000000
.........................................................................................................................................................................................................................................................................................................GTGGTGAAAGTGGATGT-GTGTAAC..........................................................................................................................................24200.0510100000000
...................................................................................................................................................................................................................................................................................................AGATTTGTGGTGAAAGTGGA.....................................................................................................................................................20200.0510000000010
.....................................................................................................................................................................................................................................................................................................ATTTGTGGTGAAAGTGGATGT-.................................................................................................................................................21200.0510000010000
..........................................................................................................................................................................................................................................................................................GGGTATATTAGATTTGTGG...............................................................................................................................................................19200.0510100000000
.........................................................................................................................................................................................................................................................................................................................................AGGAATCGTTT-CCGACCCTA..............................................................................................................20200.0510100000000
...............................................................................................................................................................................................................................................................ATACTCAA-----A--ATG-AGTATTGGGG...............................................................................................................................................................................22200.0510100000000
..................................................................................................................................................................................................................................................................................................................................................TT-CCGACCCTATAAAGTATATATAT................................................................................................25200.0510100000000
.................................................................................................................................................................................................................................................................................................................................................................................................GAGTCGATTGAGCCATGTCTGT.....................................................22200.0510100000000
....................................................................................................................................................................................................................................................................................................................................................................................................................TGTCTGTCCGTCTGTCCGTCCC----..............................22200.0510100000000
........................................................................................................................................................................................................................................................................................................................GT-GTGTAACGTCCAGAAGGA...............................................................................................................................20200.0510000100000
.........................................................................................................................................................................................................................................................................................................GTGGTGAAAGTGGATGT-GA...............................................................................................................................................19200.0510100000000
................................................................................................................................................................................................................................................................................................................................ACGTCCAGAAGGAATCGTTT-C......................................................................................................................21200.0510001000000
..........................................................................................................................................................................................................................................................................................................................................................................ATTCTTGATCAGCATCAATA..............................................................................20200.0510000001000
.................................................................................................................................................................................................................................................................................G-AGTATTGGGGTATATTAGA......................................................................................................................................................................20200.0510100000000
.......................................................................................................................................................................................................................................................................................................TTGTGGTGAAAGTGGATGT-GT...............................................................................................................................................21200.0510000000010
......................................................................................................................................................................................................................................................................................................................ATGT-GTGTAACGTCCAGAAG.................................................................................................................................20200.0510001000000
........................................................................................................................................................................................................................................................................................................TGTGGTGAAAGTGGATGT-GTGTAACGT........................................................................................................................................27200.0510000001000
...............................................................................................................................................................................................................................................................................................................................................................AAAGTATATATATTCTTGATCAGCAT...................................................................................26200.0510000000010
.......................................................................................................................................................................................................................................................................................................................................................................................................................................CCC----C----TTCAGCGCCTAATGCTA........21200.0510000000010
......................................................................................................................................................................................................................................................................................................................................................................................................................TCTGTCCGTCTGTCCGTCCC----..............................20200.0510000000010
............................................................................................................................................................................................................................................................................................................................................AATCGTTT-CCGACCCTATAAAGT........................................................................................................23200.0510100000000
...........................................................................................................................................................................................................................................................................................GGTATATTAGATTTGTGGTGA............................................................................................................................................................21200.0510100000000
.........................................................................................................................................................................................................................................................................................................GTGGTGAAAGTGGATGT-G................................................................................................................................................18200.0510000000010
........................................................................................................................................................................................................................................................................................................................................AAGGAATCGTTT-CCGACCCTATAAAGA........................................................................................................27200.0510000000010
.......................................................................................................................................................................................................................................................................................................................................................................................................................CTGTCCGTCTGTCCGTCC...................................18200.0510100000000
........................................................................................................................................................................................................................................................................................................TGTGGTGAAAGTGGATGT-GTGTAACG.........................................................................................................................................26200.0510000001000
........................................................................................................................................................................................................................................................................................................TGTGGTGAAAGTGGATGT-GA...............................................................................................................................................20200.0510100000000
......................................................................................................................................................................................................................................................................................................TTTGTGGTGAAAGTGGATGT-GTGTAACGT........................................................................................................................................29200.0510000001000
.............................................................................................................................................................................................................................................................................................................................................................................CTTGATCAGCATCAATAGCCGAG........................................................................23200.0510010000000
..............................................................................................................................................................................................................................................................................................................................................................................TTGATCAGCATCAATAGCCGAGTCGATT..................................................................28200.0510010000000
............................................................................................................................................................................................................................................................................................................................................AATCGTTT-CCGACCCTATAAAGTATATA...................................................................................................28200.0510100000000
droPer2
AA-GT-G-------CCGTA---CAG-TT---------------------------------------------CAG---------TGGTCAGTGAATGACAAGAATTTAGTGCAG--ATATA----------------------------------------------T---------TTGGG-----------AAAAG-A--------GGT--A-------------------------------TGT-TTTTTATACCCGATACTCAAAATG-AGTATTGGGGTATATTAGATTTGTGGTAAAAGTGGATGT-GTGTAACGTCCAGAAGGAATCGTTT-CCGACCCTATAAAGTATATATATTCTTGATCAGCATCAATAGCCGAGTCGATTGAGCCCTGTCTGTCTGTCCGTCTGTCCGTCCGT---------------------------------SizeHit CountTotal NormTotalM021
Embryo
M042
Female-body
V042
Embryo
V050
Head
V057
Head
V111
Male-body
...................................................................................................................................................................................................................................................................................................................................TCCAGAAGGAATCGTTT-CCGA...................................................................................................................21200.70140000014
...............CGTA---CAG-TT---------------------------------------------CAG---------TGGTCAGTGAA............................................................................................................................................................................................................................................................................................................................................................................23200.408080000
...............CGTA---CAG-TT---------------------------------------------CAG---------TGGTCAGTGAATGA.........................................................................................................................................................................................................................................................................................................................................................................26200.357050002
...............CGTA---CAG-TT---------------------------------------------CAG---------TGGTCAGTGAATG..........................................................................................................................................................................................................................................................................................................................................................................25200.306060000
.................................................................................................................................................................................................................................................................................................................AGTGGATGT-GTGTAACGTC.......................................................................................................................................19200.204000400
...............CGTA---CAG-TT---------------------------------------------CAG---------TGGTCAGTGAAT...........................................................................................................................................................................................................................................................................................................................................................................24200.153000003
............................................................................................................AGTGCAG--ATATA----------------------------------------------T---------TTGGG-----------AAAAG-A--------GG.........................................................................................................................................................................................................................................................26200.153030000
.............................................................................................................GTGCAG--ATATA----------------------------------------------T---------TTGGG-----------AAAAG-A--------G..........................................................................................................................................................................................................................................................24200.102020000
.............................................................................................................GTGCAG--ATATA----------------------------------------------T---------TTGGG-----------AAAAG-A--------GG.........................................................................................................................................................................................................................................................25200.102020000
...............CGTA---CAG-TT---------------------------------------------CAG---------TGGTCAGTGA.............................................................................................................................................................................................................................................................................................................................................................................22200.102020000
......................................................................................................................................................................................................................................................................................................................................................................................................................TCTGTCCGTCTGTCCGTCC...................................19200.102000200
...................................................................................................................................................................................................................................................................................................................................TCCAGAAGGAATCGTTT-CCG....................................................................................................................20200.051000010
...............CGTA---CAG-TT---------------------------------------------CAG---------TGGTCAGTG..............................................................................................................................................................................................................................................................................................................................................................................21200.051001000
.......................................................................................................................................................................................................................................................................................................................................GAAGGAATCGTTT-CCGACCC................................................................................................................20200.051010000
....................................................................................................................................................................................................................................................................................................................................................................................AGCATCAATAGCCGAGTCGATTGAGC..............................................................26200.051010000
...........................................................................................................TAGTGCAG--ATATA----------------------------------------------T---------TTGGG-----------AAAAG-A--------G..........................................................................................................................................................................................................................................................26200.051000001
............................................................................................................AGTGCAG--ATATA----------------------------------------------T---------TTGGG-----------AAAAG-....................................................................................................................................................................................................................................................................23200.051000001
...........................................................................................................TAGTGCAG--ATATA----------------------------------------------T---------TTGGG-----------AAAAG-A--------GG.........................................................................................................................................................................................................................................................27200.051010000
.......................................................................................................................................................................................................................................................................................................................TGT-GTGTAACGTCCAGAAGGAAT.............................................................................................................................23200.051000001
droWil2
AAGAA-AACGA--GTGCAG----CAAATAATCT----------------------------------------------------TATGCA--AG-------A-------------------------------------------------AAAAGATA-GAGAAAACAA------------AGCAGC-----------G-------------------------AT------------------CAA-TTTTTATACCCTT-----G--CA-----AAAAGGGTATATTAATTTTGGTCA-------AAAGT-GTGCAACGCATAGAAGGAAGCATCT-CCGACCATATAAAGTATATATATTCTTGATCAGCACGACGAGACGAGTTCAAATAGCCATGTCCGTCCGTCCGTCCGTCCGTCTG----G----ATCAACGCAAACTCCTCCTAGACC-SizeHit CountTotal NormTotalM020
Head
M045
Female-body
V117
Male-body
V118
Embryo
V119
Head
...............................................................................................................................................................................................................................................................................................................................................................................TGATCAGCACGACGAGACGAG........................................................................21200.40808000
AAGAA-AACGA--GTGCAG----CAAAT................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.35700061
....................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAACGCAAACTCCTCCTAGA...21200.30606000
.......................................................................................................................................................................................................................................................................................................TTGGTCA-------AAAGT-GTGCAACGC........................................................................................................................................21200.20404000
.............................................................................................................................................................................................................................................................................................................A-------AAAGT-GTGCAACGCATAGAAGGAAGC............................................................................................................................27200.20400400
.....................................................................................................................................................................................................................................................................................................................................................................................................TCAAATAGCCATGTCCGTCC...................................................20200.15303000
...........................TAATCT----------------------------------------------------TATGCA--AG-------A-------------------------------------------------AAAAGATA-GAGA.......................................................................................................................................................................................................................................................................................................27200.10202000
......................................................................................................................................................................................................................................................................................................TTTGGTCA-------AAAGT-GTGCAACGC........................................................................................................................................22200.10202000
........................................................................................................................................................................................................................................................................................................TGGTCA-------AAAGT-GTGCAACGCATAG....................................................................................................................................24200.10200020
..........................................................................................................................................................AAGATA-GAGAAAACAA------------AGCAGC-----------G-------------------------A.........................................................................................................................................................................................................................................24200.10202000
......................................................................................................................................................................................................................................................................................................................................................................................................CAAATAGCCATGTCCGTCCGTCC...............................................23200.10200020
..............................................................................................................................................................TA-GAGAAAACAA------------AGCAGC-----------G-------------------------A.........................................................................................................................................................................................................................................20200.10202000
.....................................................................................TATGCA--AG-------A-------------------------------------------------AAAAGATA-GAGAAAACA..................................................................................................................................................................................................................................................................................................26200.10200020
AAGAA-AACGA--GTGCAG----CA...................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.05101000
............................................................................................................................................................................................................................................................................................................................................................TATAAAGTATATATATTCTTGATCAG......................................................................................26200.05100010
.....................................................................................TATGCA--AG-------A-------------------------------------------------AAAAGATA-GAGAAAACAA------------.....................................................................................................................................................................................................................................................................................27200.05100010
.....................................................................................TATGCA--AG-------A-------------------------------------------------AAAAGATA-GAGAAA.....................................................................................................................................................................................................................................................................................................23200.05101000
...................................................................................................................................................................................................................................................................................................................................CATAGAAGGAAGCATCT-CCGACC.................................................................................................................23200.05101000
..............................................................................................G-------A-------------------------------------------------AAAAGATA-GAGAAAACAA------------AGC..................................................................................................................................................................................................................................................................................23200.05100010
...............................................................................................................................................................................................................................................................................................TATTAATTTTGGTCA-------AAAGT-GTGCAAC..........................................................................................................................................27200.05100010
.........................................................................................................................................................................................................................................................................................................................................................................TATTCTTGATCAGCACGACGA..............................................................................21200.05100001
.............................ATCT----------------------------------------------------TATGCA--AG-------A-------------------------------------------------AAAAGATA-GAGAA......................................................................................................................................................................................................................................................................................................26200.05100010
................................................................................................................................................................................................................................................................................................................................................................................................CGAGTTCAAATAGCCATGTCC.......................................................21200.05101000
............................................................................................................................................................GATA-GAGAAAACAA------------AGCAGC-----------G-------------------------A.........................................................................................................................................................................................................................................22200.05100010
..............................................................................................................................................................TA-GAGAAAACAA------------AGCAGC-----------G-------------------------AT------------------C.....................................................................................................................................................................................................................22200.05101000
.................................................................................................................................................................................................................................................................................................................................................TCT-CCGACCATATAAAGTA.......................................................................................................19200.05101000
.........................................................................................................................................................................................................................................................................................................................T-GTGCAACGCATAGAAGGAAGCAT..........................................................................................................................24200.05101000
...............................................................................................................................................................A-GAGAAAACAA------------AGCAGC-----------G-------------------------AT------------------CAA-T.................................................................................................................................................................................................................24200.05100010
.....................................................................................TATGCA--AG-------A-------------------------------------------------AAAAGATA-GAGAAAAC...................................................................................................................................................................................................................................................................................................25200.05101000
......AACGA--GTGCAG----CAAATAATCT----------------------------------------------------.......................................................................................................................................................................................................................................................................................................................................................................................21200.05100010
...................................................................................................................................................................GAAAACAA------------AGCAGC-----------G-------------------------AT------------------CAA-TT................................................................................................................................................................................................................22200.05100100
....................................................................................................................................................................AAAACAA------------AGCAGC-----------G-------------------------AT------------------CAA-T.................................................................................................................................................................................................................20200.05100010
..................................................................................................................................................................AGAAAACAA------------AGCAGC-----------G-------------------------AT------------------CAA-TTTT..............................................................................................................................................................................................................25200.05100010
...............................................................................................................................................................A-GAGAAAACAA------------AGCAGC-----------G-------------------------AT------------------CAA-..................................................................................................................................................................................................................23200.05101000
...AA-AACGA--GTGCAG----CAAATAA..............................................................................................................................................................................................................................................................................................................................................................................................................................................20200.05101000
..........................................................................................................................................................AAGATA-GAGAAAACAA------------AGCAGC-----------G-------------------------AT------------------......................................................................................................................................................................................................................25200.05100010
............................................................................................................................................................GATA-GAGAAAACAA------------AGCAGC-----------G-------------------------AT------------------C.....................................................................................................................................................................................................................24200.05101000
..............................................................................................................................................................................................................................................................................................................................................................................................................CATGTCCGTCCGTCCGTCC...........................................19200.05101000
..............................................................................................................................................................TA-GAGAAAACAA------------AGCAGC-----------G-------------------------AT------------------CAA-TT................................................................................................................................................................................................................26200.05100010
droVir3
TG-AA-T--GT--ACTCAA----CAAA-AG---------------TA--------------------------------------------------------------GCGGTT--AAGTGAAAATAATAAATTGAAATATATTTTTTTAT----------AGTAACCTA---ACGT-----------GT-AAAACTTA---------ATT--ATATAT--------------------------ATA-TTTTTATACCCTT-----G--CA-G------AGGGTATTATAATTTTGTCGT-------GAAAT-GTGCAACGCATAGAAGGAGACATCT-CCGACCCCATAAAGTATATATATTCTTAATCAGCATCAACAGCCGAGTCGATATAGCCATGTCCGTCTGTCCGTCTGTCTGT------------TTCTATGCGAACTAGCC-CTCAGT-SizeHit CountTotal NormTotalM027
Male-body
M028
Head
M047
Female-body
M061
Embryo
SRR060654
Ovary
SRR060655
Testis
SRR060656
Ovary
SRR060657
Testis
SRR060658
Ovary
SRR060659
Testis
SRR060660
Ovary
SRR060661
Embryo
SRR060662
Embryo
SRR060663
Embryo
SRR060664
Male-body
SRR060665
Female-body
SRR060666
Male-body
SRR060667
Female-body
SRR060668
Male-body
SRR060669
Female-body
SRR060670
Testis
SRR060671
Male-body
SRR060672
Female-body
SRR060673
Ovary
SRR060674
Ovary
SRR060675
Ovary
SRR060676
Ovary
SRR060677
Ovary
SRR060678
Testis
SRR060679
Testis
SRR060680
Testis
SRR060681
Testis
SRR060682
Embryo
SRR060683
Testis
SRR060684
Embryo
SRR060685
Embryo
SRR060686
Embryo
SRR060687
Embryo
SRR060688
Ovary
SRR060689
Testis
SRR1106712
embryo_0-2h
SRR1106713
embryo_0-2h
SRR1106714
embryo_2-4h
SRR1106715
embryo_4-6h
SRR1106716
embryo_4-6h
SRR1106717
embryo_6-8h
SRR1106718
embryo_6-8h
SRR1106719
embryo_8-10h
SRR1106720
embryo_8-10h
SRR1106721
embryo_10-12h
SRR1106722
embryo_10-12h
SRR1106723
embryo_12-14h
SRR1106724
embryo_12-14h
SRR1106725
embryo_14-16h
SRR1106726
embryo_14-16h
SRR1106727
larvae
SRR1106728
larvae
SRR1106729
mixed whole adult body
SRR1106730
embryo_16-30h
V047
Embryo
V053
Head
V116
Male-body
GSM1528803
follicle cells
........................................................................................................................................................................................................................................................................................................................................................................ATATTCTTAATCAGCATCAACAGCC...........................................................................25200.70140000000000000000000020000010000000200000000000000000000000000000
..........T--ACTCAA----CAAA-AG---------------TA--------------------------------------------------------------GCGGTT--AAGTGA.................................................................................................................................................................................................................................................................................................................................................2720.501001000000000000000000000000000000000000000000000000000000000000
TG-AA-T--GT--ACTCAA----CAAA-AG---------------TA--------------------------------------------------------------...............................................................................................................................................................................................................................................................................................................................................................21200.459009000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................AAAT-GTGCAACGCATAGAAGGAGACAT..........................................................................................................................2730.331000000000000000000000000000000000001000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................AAAT-GTGCAACGCATAGAAGGAG..............................................................................................................................2340.251000000000000000000000000001000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................AGCCATGTCCGTCTGTCCGTC............................................21200.255000000000000000000000000000000000000000000000000000000000000005
............................................................................................................................................................................................................................................................................................................................TGCAACGCATAGAAGGAGACA...........................................................................................................................2150.201000000000000000000000000010000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................AAAT-GTGCAACGCATAGAAGGA...............................................................................................................................2260.171000000000000000000000000000000000001000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................AAAT-GTGCAACGCATAGAAG.................................................................................................................................20130.152000000000000000000000000000000000001100000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................CAGCATCAACAGCCGAGTCGATA..................................................................23200.153000000000000000000000000000030000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................AACGCATAGAAGGAGACATCT-CCGACC.................................................................................................................27200.102000000000000000000000000000020000000000000000000000000000000000
..................................................................................................................T--AAGTGAAAATAATAAATTGA...................................................................................................................................................................................................................................................................................................................................21200.102002000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................CAGCATCAACAGCCGAGTCGATATAGC..............................................................27200.102000000000000000000000000000000000000020000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................TAGCCATGTCCGTCTGTCCGTC............................................22200.102000000000000000000000000000000200000000000000000000000000000000
.......................................................................................................................................................T----------AGTAACCTA---ACGT-----------GT-AAAACT......................................................................................................................................................................................................................................................................22200.051000010000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................TATATTCTTAATCAGCATCA.................................................................................20200.051000000000000000000000000000000010000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................GGTATTATAATTTTGTCGT-------GAAAT-G................................................................................................................................................25200.051000000000000000000001000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................ATATTCTTAATCAGCATCAACAGCCGA.........................................................................27200.051000000000000000000000000000010000000000000000000000000000000000
.G-AA-T--GT--ACTCAA----CAAA-AG---------------TA--------------------------------------------------------------G..............................................................................................................................................................................................................................................................................................................................................................21200.051000000000000000000000000000000010000000000000000000000000000000
.......................................................................................................................................................T----------AGTAACCTA---ACGT-----------GT-AAAA........................................................................................................................................................................................................................................................................20200.051000000000000000000000000000000000000001000000000000000000000000
.......................................................................................................................................................T----------AGTAACCTA---ACGT-----------GT-AAAACTT.....................................................................................................................................................................................................................................................................23200.051001000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................TTTAT----------AGTAACCTA---ACGT-----------GT-A...........................................................................................................................................................................................................................................................................21200.051000000000000000000000000000000000000000000000000000000000000010
..............................................................................................................................................................................................................................................................................................................................................................................TTAATCAGCATCAACAGCCGAGTCGA....................................................................26200.051000000000000000000000000010000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................TTCTTAATCAGCATCAACAG.............................................................................20200.051000000000000000000000000000000001000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................TCAGCATCAACAGCCGAG........................................................................18200.051000000000000000000000000000000000010000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................TTCTTAATCAGCATCAACAGCCG..........................................................................23200.051000000000000000000000000000100000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................CGATATAGCCATGTCCGTCT...................................................20200.051000000000000000000000000000000010000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................CAGCATCAACAGCCGAGTCGA....................................................................21200.051000000000000000000000001000000000000000000000000000000000000000
.......................................................................................................................GTGAAAATAATAAATTGAAATATAT............................................................................................................................................................................................................................................................................................................................25200.051000000000000000000000000000100000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................TTCTTAATCAGCATCAACAGCCGAG........................................................................25200.051000000000000000000000000000000000001000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................TATATATATTCTTAATCAGCATCAACA..............................................................................27200.051000000000000000000000000000100000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................TCAACAGCCGAGTCGATAT.................................................................19200.051000000000000000000000000100000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................ATATTCTTAATCAGCATCAACAGCCGAG........................................................................28200.051000000000000000000000000000100000000000000000000000000000000000
droMoj3
AG-AG-AAACT--CA---C----ACA------------CACACACTG-----------------------------------------C---------------------------------------------------------------------------CAAGCTC------------AGCTGC-----------AATGCTCACTAT--GG--GA--------------------------ACT-TAATTATACCCTGAACCCA--TTG-AAAATCAGGGTATAATGGTTTTGTT-A-------AAAGT-ATGTAACAGGCAGAAGGAGGCGTGG-CAGACCCCACAAACTATATATATTCTTGATCAGGGCGACGAGCTGAGTCGATTTGGTCCTGTCCGTCTGTCCGTCCGTCCGTCCGTCCGTATGTATGAACGCGTCGATCTCAGAAGGT-SizeHit CountTotal NormTotalM046
Female-body
V041
Embryo
V049
Head
V056
Head
M060
Embryo
V110
Male-body
...............................................................................................................................................................................................................................................................................TTG-AAAATCAGGGTATAATGGTT.....................................................................................................................................................................2340.502000020
.........................................................................................................................................................................................................................................................................................................................................................................................................TTGGTCCTGTCCGTCTGTCCG..............................................2140.251000010
.........................................................................................................................................................................................................................................................................................................................T-ATGTAACAGGCAGAAGGAGGC............................................................................................................................22200.204000040
..........................................................................................................................................................................................................................................................................................................................................................................................ACGAGCTGAGTCGATTTGGTCCTGTCC.......................................................27110.091100000
................................................................................................................................................................................................................................................................................................................................................................................................TGAGTCGATTTGGTCCTGTCC.......................................................21130.081100000
..............................................................................................................................................................................................................................................................................................................................TAACAGGCAGAAGGAGGCG...........................................................................................................................19200.051000010
...............................................................................................................................................................................................................................................................................................................................................................................................................................CCGTCCGTCCGTCCGTATGTA........................21200.051100000
................................................................................................................................................................................................................................................................................................................................................................AACTATATATATTCTTGATCAGGGC...................................................................................25200.051100000
........................................................................................................................................................................................................................................................................................................................................................ACCCCACAAACTATATATATTCTTGA..........................................................................................26200.051100000
droGri2
CA-AG-GC-----GCTCAC----AGAGCAATCA-----CAGAAACTG--------------------------------------------------------------GCGCTG--ACGTCAC-------------------------------------------GGTA---------AGT-----------AAAAG----GC-----AT--AT--GC--------------------------ATT-TTTTTATACCCTCAACCAA--GTGGGTAAAAAGGGTATAATGGTTTTGTTCA-------AATGT-ATGTAACAGGCAGAAGGAATCATCT-TCGACCCCATAAAACATATATATTCTTGATCACGGTCAACAGTCGAGTCGATATAGCCATGTCCGTCTGTCCGTCCGTCCGTCTGT--------ATGAACACGCAGATCTCAGAGACT-SizeHit CountTotal NormTotalM041
Female-body
V109
Male-body
...............................CA-----CAGAAACTG--------------------------------------------------------------GCGCTG--ACGTCAC-------------------------------------------G....................................................................................................................................................................................................................................................................................................2520.50101
.............................ATCA-----CAGAAACTG--------------------------------------------------------------GCGCTG--ACG....................................................................................................................................................................................................................................................................................................................................................2220.50110
...........................................ACTG--------------------------------------------------------------GCGCTG--ACGTCAC-------------------------------------------GGG..................................................................................................................................................................................................................................................................................................2020.50110
................................A-----CAGAAACTG--------------------------------------------------------------GCGCTG--ACGTCAC-------------------------------------------G....................................................................................................................................................................................................................................................................................................2420.50101
................................A-----CAGAAACTG--------------------------------------------------------------GCGCTG--ACG....................................................................................................................................................................................................................................................................................................................................................1920.50110
........................................GAAACTG--------------------------------------------------------------GCGCTG--ACGTCAC-------------------------------------------G....................................................................................................................................................................................................................................................................................................2120.50110
..............................TCA-----CAGAAACTG--------------------------------------------------------------GCGCTG--.......................................................................................................................................................................................................................................................................................................................................................1820.50101
...........................................ACTG--------------------------------------------------------------GCGCTG--ACGTCAC-------------------------------------------GGGC---------........................................................................................................................................................................................................................................................................................2120.50101
............................................CTG--------------------------------------------------------------GCGCTG--ACGTCAC-------------------------------------------GGGC---------........................................................................................................................................................................................................................................................................................2030.33110

Generated: 05/18/2015 at 02:35 AM