dan_1623

Name	Class	Family	Strand
BEL1-I_DV-int	LTR	Pao	+

##################################################--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- TCCGGCCAACCCAACATTACTTGATCCGGCTCGAGTCAGGAGCCTTCTCTGTGAGGCTTCCGTTGAATGCAGTTGCTAGCATAATTTTACTCCCACTCTCCTCCTTAAAAGAAAGCTTTGCTATCATCCTCAATTGAAGGATCAGTATGCTGCGTTTATAAAAGAGTATTTTGAGTTGGGGCATACGTCTTCAGTCCCGGCTAGTACAAAACTTCCTACCGCACCTCTGTCATTTGAAGGAGGACACTTAA ************************************************.....((.....(((((.((...(((...............(((((((..(((..((((....(((..((((...((((((....)).)))).)))).)))...)))).....)))......)))).))))))...)).))))).....))************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	V055 head	V039 embryo	M044 female body	V105 male body	V106 head
.................................................................................................................................................................................GGGGCATTCGTCTTCAGACCC.....................................................	21	2	1	1.00	1	0	1	0	0	0
.......................................................GCTTCCGTTGAATGACGTG.................................................................................................................................................................................	19	3	20	0.25	5	0	0	1	2	2
..................ACTTGATCGGGCTGGTGTCA.....................................................................................................................................................................................................................	20	3	4	0.25	1	1	0	0	0	0
.............ACAGTACTTGATCGGGCGC...........................................................................................................................................................................................................................	19	3	7	0.14	1	1	0	0	0	0
...................................................................................................................................AATTGAAGGATCAGTATGCTGCGTT...............................................................................................	25	0	7	0.14	1	0	0	1	0	0
.................................................................................................................................TCAATTGAAGGATCAGTATGCTGCGTT...............................................................................................	27	0	7	0.14	1	0	0	1	0	0
...................................................................................................................................................................................................................................TGTAATTTGAAGGAGTACA.....	19	2	7	0.14	1	1	0	0	0	0
..................ACTTGATCCGGCTGAAGTC......................................................................................................................................................................................................................	19	2	8	0.13	1	1	0	0	0	0
................GTACTTGATCCGGTTGGAGTC......................................................................................................................................................................................................................	21	3	8	0.13	1	1	0	0	0	0
...........................GGTTCGATTCAGGAGACTTC............................................................................................................................................................................................................	20	3	10	0.10	1	0	1	0	0	0
............................................................................................................................................................................GACTTGGGGAATACGTCT.............................................................	18	2	10	0.10	1	1	0	0	0	0
..................ACTTGATCAGGCTGGAGT.......................................................................................................................................................................................................................	18	2	20	0.10	2	2	0	0	0	0
..................ACTTGATCCGGTTCAAGT.......................................................................................................................................................................................................................	18	2	10	0.10	1	1	0	0	0	0
................................................................................................................................................................................................AGTCCCGGCCAGTACTACA........................................	19	3	20	0.05	1	1	0	0	0	0
..................ACTTGATCCGGGTGGGGT.......................................................................................................................................................................................................................	18	3	20	0.05	1	1	0	0	0	0
.......................................................................................................................................................................ATTTTGCGTAGGGGTATAC.................................................................	19	3	20	0.05	1	1	0	0	0	0

AGGCCGGTTGGGTTGTAATGAACTAGGCCGAGCTCAGTCCTCGGAAGAGACACTCCGAAGGCAACTTACGTCAACGATCGTATTAAAATGAGGGTGAGAGGAGGAATTTTCTTTCGAAACGATAGTAGGAGTTAACTTCCTAGTCATACGACGCAAATATTTTCTCATAAAACTCAACCCCGTATGCAGAAGTCAGGGCCGATCATGTTTTGAAGGATGGCGTGGAGACAGTAAACTTCCTCCTGTGAATT ************************************************.....((.....(((((.((...(((...............(((((((..(((..((((....(((..((((...((((((....)).)))).)))).)))...)))).....)))......)))).))))))...)).))))).....))************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	M044 female body	V055 head	V106 head
.............................GAGCTCAGTCCTCGGAAGAGACAC......................................................................................................................................................................................................	24	0	1	1.00	1	1	0	0
.......................................................................................................................................................................................ATGCAGAAGTCAGGGCCGATCATGTT..........................................	26	0	1	1.00	1	1	0	0
.............................................................................................................................................................................................................TGTTTTGATGGATGTGGTGGA.........................	21	3	2	0.50	1	0	1	0
...........................................................................................................................AGTAGGAGTTAACTTCCGAGTCATAC......................................................................................................	26	1	2	0.50	1	1	0	0
..........................................................................................................................................................................................................TCATGTCTTGGATGATGGCGT............................	21	3	4	0.25	1	0	1	0
..........................................................................................................................................................................................CAGAAGTCAGGGGAGATGAT.............................................	20	3	9	0.11	1	1	0	0
....................................................................CGTCTACGATCGTATTATGA...................................................................................................................................................................	20	3	10	0.10	1	0	0	1
....................................................................................................................................................................................................GGGCGATCATGTCCTGAAG....................................	19	3	11	0.09	1	1	0	0
....................................................................................................................................TAGCTTCCTAGTCTTACG.....................................................................................................	18	2	18	0.06	1	0	1	0
.......................................................................................................................................CTTCCTAGACATAGGGCGCAA...............................................................................................	21	3	18	0.06	1	0	1	0
.........................................................................................................................................................................................GCAGGAGTCAGGGGCGA.................................................	17	2	18	0.06	1	0	1	0
.....................................................................................................................................................................................................GGCGATCATGTCCTGAAG....................................	18	3	20	0.05	1	1	0	0

Species	Coordinate	ID	Alignment
droAna3	scaffold_13250:3336230-3336480 +	dan_1623	TCCGGCCA------------------ACCCAACATT-----------------------------------ACTTG--------------------------------------AT---------------------CCGGCTCGAGTCAGGAGCCTTCTCTGTGAGGCTTCCGTTGAA-TGCA-------GTTGCTAGCATAATTTTACTCCCA--------------CTCTCCTCCTTAAAAGAAAGCTTTGCTATCATCCTCAATTGAAGGATCAGTATGCTGCGTTTATAAAAGAGTATTTTGAGTTGGGGCATACGTCTTCAGTCCCGGCTAGTAC--------------A--AAACTTCCTACCGCACCTCTGTCATTTGAAG---GAGGACACTTAA
droBip1	scf7180000395310:68580-68858 +		TTCGTGCA-------------------------------------------------------------AAATGTT--------------------------------------GC---------------------TTGGCTGGATTCCGACGCTTACGCTGTGAGGCTTTCGTTTAAATGCGGTTCTAAGTTGCTTGGATAATCTTACCCCCAAGCCGTTCGACGATTTCTTCCCCTCGAAAGGAAGCTCTGTCGCCGTCCTCAATTGAAGGAGCAATATGTTGCCTTCATAAAGGAGTATTTGGAGTTGGGTCATATGTCTCCAGTCCAGGCTGATGCGAGCGTCACTGGCCA--ATACTTTCTGCCACATTATTGTGTTTTAAAG---GAGGACAGTTAA
droKik1	scf7180000297905:28434-28671 -		AC-----------------------------------------------------------------------TTT--------------------------------------AC---------------------TCGGCTGCCGTCAGGAGAATATTCGGTTGGCCTGCCAA-------------------------------CTGTCAACAAGCTTATCGTCGTTTCGTCAACCTGGAGAACAAACTGGATCGTCATCCTCATCTCAAAGCCCAGTACTCGGCATTTATTCGTGAGTACCTAGACCTGAATCATATGTCTCTTATGGATTTAGACTCACGGAATTTATGCAA--GTTTTATCTGCCACATCACTGCGTCATTAAA---GGGGATAGTACA
droFic1	scf7180000452189:17702-17896 +		TCTGGATC-----------------------------------TTCTTCTGTGAGGCGCACTTTACAAAGCATTTC--------------------------------------AT---------------------TCGCTCCCCTGCTGGAGACTATTCTGTTCGGTTACCTGCCAAGCTCAATCGGGAATT-----------------------------------------------------------------------------TGGCACAATATGCTGCTTTGATAAAGGAATACCTTGACTTGGGGTACATGTCGCT-----------------------------------TCTTTTTCCTCATCATTGCGTCATAAAG---GAGAATAGATCC
droEle1	scf7180000490719:16205-16405 -		AG-----------------------------------------------------------------------------------------------------------------------------------------------------------------TAAAGTTGCCTCTAAAACTTAACTTGGAT-------------------------------------GTTCTTGTTTAGAAAGAAGACTGGATCGGCATCCTCAGCTAAAGGAAAAGTACGCAGCATTCATCAAAGGATATAGAGATTTGGCTCACATGGCGTTGGTGAGTCCCGAATCAAAAGTACGATGTCA--ATACTACAAGTCGCATCATTGCGTTCTTAAA---GAAGACAGTTCG
droRho1	scf7180000763973:594-866 +		CA-------------------------------------------------------------------ACATTCT--------------------------------------AC---------------------TCGGCTCAAGTCAGGCGCCTATGCTGTGAGGCTGCCGTTGAAATGCAGTTCTGATTTGCTGGGAGAATCGTATCCCCAAGCCGTGCGTCGATTTCTCTCTCTAGAAAGGAAGCTCAGTCGTCACCCTCAATTGAAGAATCAGTATGCTGCGTTTATAAAAGAGTATTTGGAGTTGGGCCATAGGTCTGCAGTTCCTGCTAATGCGAGCCTCACTCCTCA--GTACTTCCTACCTCACCACTGTGTTTTGAAA---GAGGACAGTTCA
droBia1	scf7180000302519:151545-151764 -		CA-------------------------------------------------------------------ACATTCC--------------------------------------TA---------------------TCTGCTCAAGTCAGGCGCTTACGGTATTACGCTGCCGTTGAAATGTAGATCTAGTTTGCTGGGAGAATCTTATTCCCAACCA-----------------------------------------------------CTCACAGTGTGCTGCATTAATTAAATAGTATTTGGAGTTGGGGCATTTATCTTTATTTCCTGCTAGTGCGAGAATAACTCCCCA--TTTTTTCCTGCAGCACCTTTGTGTTTTTAAA---GAGGCCAATTAA
droTak1	scf7180000415127:9159-9431 -		CA-------------------------------------------------------------------ACACTCT--------------------------------------AC---------------------TCGGCTCAAGTCAGGCGCTTATGCTGCGAAGCTGCCGTTGAAATGCAGTTCTGATTTGCTGGGAGAATCGTATTCCCAAGCCGTGCGTCGATTTCTCTCTCTGGAAAGGAAGCTCAGTCGTCACCCTCAATTGCAGAATCAGTATTCTGCGTTTATAAAAGAGTATTTGGAGTTGGGCCATATGTCTGCAGTTCCTGCTAATGCGAGCCTCACTCCTCA--GTACTTCCTACCTCACCACTGTGTTTTGAAA---GAGGACAGTTCA
droEug1	scf7180000409074:27277-27304 -		TCCTGCCA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGTGGCTCTGGCAGATCCG--------------------------------------------------------------------
dm3	chrU:7498904-7499177 -		AA--------------------------------------------------------------------AATTAC--------------------------------------AC---------------------CCGACTGGCAGCTGGCGATTACTCAGTACGGTTGCCGCTAAAACTCAATTTGGACTCTTTAGGAGATTCCTATCCTCAGTCTTTGCGGAGATTCTTGTCGCTGGAAAGGAAGCTTACAAAGCACCCTGGCTTGAGGGTTAAATATGCGGCGTTCATGAAGGAATATCGTGATCTGGGACATATGTCGCCTGTGCCTGCCTCCGAGGTCAGCTCGTGCAGAAATTTTTTTTACCACATTACTGCGTCATGAAG---GAGGATAGCACT
droSim2	node_40194:3433-3604 -		TCT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCTCTCGAGAGAAAGTTTATTCGGAATCCTGTCGTGAAGGATCAGAATGCAGAATTCATGAAGAAGTATCTGGGCATTGGGCATATGTCCCTTGTTCCTTCATCCCTGATCAGTTCTTGCCA--ATACTTCTTACCGCAACACCGTGTCATAAAAAAAAAAGATAACTCG
droSec2	scaffold_49:145295-145554 -		GG-------------------------------------------------------------------------------------------------------------------------------------------CTTCCATCTGGAGAATTTTCAGTTCGACTTCCTGCAAAGCGCAGCCTGGAAGTGTTAGGATATTCCTATCGACAAGCCTATCGCCCTTTTTTAAATGTGGAAAACAAACTTGAACGCCATCGCCATCTCAATGAAAAGTATTCAGCCTTTATTTAGGAGTACTTATCTTTAAATCATATGTCTCTGGTACCATTTGACTCCCAGAACCTATGCAA--ATTTTATTTGCCGCATCACTGCGTTTTAAAG---GTAGACAGCACA
droYak3	v2_chr2h_random_005:769020-769258 -		AGCGCG-------------------------------------------------------------------CC-GACCCGGAATTTCATAAAGCTCAGCGTGTCGACCTGTTAATAGGAGCTAGCCTGT---------------------------TTGTGA-----------------------------------------------------------------GCTGCTGTGTGGAAAGGAATCTTACAAAGCACCCTGGCTTGAGGGTTAAATATGCGGCGTTCATGAAGGAATATCGTCATCTGGGACATATGTCGCCTGTGCCTGCTTCCGAGGTCAGCTCGTGCCG--ATATTTTTTACCACATCACTGCCTCATGAAG---GAGGATAGCTCT
droEre2	scaffold_4784:23683010-23683158 +		TCT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCTCTTTAGAGGAAGCTTAATTGGAGTCCTGTCGTGAAGGATCAGTATTCTGCATTCATGAAGGAGTATTTGGAGT--------ATT------------TCATCCCCGATCAGTTCTTGCCG--ATACTTCTTACCGCATCACTGTGTCATGAAA---GAAGATAGCTCT
dp5	Unknown_singleton_1730:3486-3755 -		GCTAGAT------------------------------------------TGTGAAGCACACTTTGTGCAGCATTTC--------------------------------------CG---------------------TCGACTACATAAAGGCGATTATTGTAGTCGGC----------------------------TGGAGAATTTTACATTCAAGCGCTTCGTAGATTCCTGACCCTTGAGAGAAAGTTAGATCGTCACCCTGATGTTAAATCTCAGTATGCAGTATTTATAAAGGAGTACCTTGATTTAGGCCATATGTCTCAGGTTCCTACCCAGTCAATCAGCAACTGCCG--ATATTTTTTGCCTCACAATTGCGTCATGAAG---GAAGATAGTTCT
droPer2	scaffold_84:236012-236356 -		TCCATCTA------------------ACATACCACT-----------------------------------AGCT-GATCCGGAGTTTTATAAGCCGCAGCGCGTCGATCTGCTAATTGGCGCAAGTCTGCGGCATTTCGACTATATAAAGGCGATTATTGTGTTCGGCTGCCAGCAAAATATAATTTGGATCTCCTTGGAGAATCTTACAATCAAGCGCTTCGTAGATTCCTGACCCTTGAGAGATAGTTAGATCGTCGCCCTGATGTTAAATCTCAGTATGCAGCATTTATAAAGGAGTACCTTGATTTAGGCCATATGTCTCAGGTTTCTACCCAGTCAATCAGCAACTGCCG--ATATTTTTTGCCTCATCATTGCGTCATGAAG---GAAGATAGTTCT
droVir3	scaffold_12941:92495-92761 -		ATA--------------------------------------------------------------------ACTTC--------------------------------------TC---------------------CCGTTTACAATCCGGCGAGTATTCAGTGCGGTTCCCTCTGAAACGGAGTGCTGAGCATCTAGGAGAGTCTTATGGCCAGGCTCATCTTCGATTTCTCGGTCTTGAGCGAAAATTGTGTCGGAATTCGCATCTGAAGGAGCAGTATTCGGCATTCATCAAAGAGTTTCTGGATCTAAATCACATGTCGCGAGTTAGTACAGTT--GAGAGGCTGTTGTAA--ATACTTCCTCCCACATCATTGTGTCTTGAAA------GACAGCACC
droMoj3	scaffold_3913:3274-3537 +		ACCCTGAAATAGCTAGCTGATCGCCAAGGTAACAACAGAGGAGCTCCATTGTCAGCAGCATTTCATCACAACTCAT--------------------------------------CG---------------------TCGAATGTCTTCAGGCGAATATTTAGTCTGCTTGCCAAAAAAGCAAGGCGTCGAGTCTTTGGGCGACTCTTATTTGCAGGCCAAACGTCGGCTCTTAAATTTGGAGTGCAAGTTTGCTCGAAATCATGTTCTAAAGGAGAAATATTCTGCATTTATAAAAGAGTATATTGATCTCAAACATATGTC---------------------------------------------------------------------------------
droGri2	scaffold_14983:76742-76903 +		C---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGAGCGCAAGCTCGGTCGTCGCTCAAGCCTTAAGCAGCAATAATTTGCATTTATACAAGAGTATTTTAACCTAAAGCACATGTCGCTGGTCGATCCTCTGTATTTTGATCAATGCAA--ATATTTCCTTCCACATCACTGAGTCTTGAAG---GAGGACAGCACG

Re-alignment of all predicted orthologs with sRNA reads

Species

Read alignment

droAna3

TCCGGCCA------------------ACCCAACATT-----------------------------------ACTTG--------------------------------------AT---------------------CCGGCTCGAGTCAGGAGCCTTCTCTGTGAGGCTTCCGTTGAA-TGCA-------GTTGCTAGCATAATTTTACTCCCA--------------CTCTCCTCCTTAAAAGAAAGCTTTGCTATCATCCTCAATTGAAGGATCAGTATGCTGCGTTTATAAAAGAGTATTTTGAGTTGGGGCATACGTCTTCAGTCCCGGCTAGTAC--------------A--AAACTTCCTACCGCACCTCTGTCATTTGAAG---GAGGACACTTAA	Size	Hit Count	Total Norm	Total	M044 Female-body	M058 Embryo	V039 Embryo	V055 Head	V105 Male-body	V106 Head
.........................................................................................................................................................................................................................................................................AATTGAAGGATCAGTATGCTGCGTT..................................................................................................................	25	7	0.14	1	1	0	0	0	0	0
.......................................................................................................................................................................................................................................................................TCAATTGAAGGATCAGTATGCTGCGTT..................................................................................................................	27	7	0.14	1	1	0	0	0	0	0

droBip1

TTCGTGCA-------------------------------------------------------------AAATGTT--------------------------------------GC---------------------TTGGCTGGATTCCGACGCTTACGCTGTGAGGCTTTCGTTTAAATGCGGTTCTAAGTTGCTTGGATAATCTTACCCCCAAGCCGTTCGACGATTTCTTCCCCTCGAAAGGAAGCTCTGTCGCCGTCCTCAATTGAAGGAGCAATATGTTGCCTTCATAAAGGAGTATTTGGAGTTGGGTCATATGTCTCCAGTCCAGGCTGATGCGAGCGTCACTGGCCA--ATACTTTCTGCCACATTATTGTGTTTTAAAG---GAGGACAGTTAA	Size	Hit Count	Total Norm	Total
No Reads

droKik1

AC-----------------------------------------------------------------------TTT--------------------------------------AC---------------------TCGGCTGCCGTCAGGAGAATATTCGGTTGGCCTGCCAA-------------------------------CTGTCAACAAGCTTATCGTCGTTTCGTCAACCTGGAGAACAAACTGGATCGTCATCCTCATCTCAAAGCCCAGTACTCGGCATTTATTCGTGAGTACCTAGACCTGAATCATATGTCTCTTATGGATTTAGACTCACGGAATTTATGCAA--GTTTTATCTGCCACATCACTGCGTCATTAAA---GGGGATAGTACA	Size	Hit Count	Total Norm	Total
No Reads

droFic1

TCTGGATC-----------------------------------TTCTTCTGTGAGGCGCACTTTACAAAGCATTTC--------------------------------------AT---------------------TCGCTCCCCTGCTGGAGACTATTCTGTTCGGTTACCTGCCAAGCTCAATCGGGAATT-----------------------------------------------------------------------------TGGCACAATATGCTGCTTTGATAAAGGAATACCTTGACTTGGGGTACATGTCGCT-----------------------------------TCTTTTTCCTCATCATTGCGTCATAAAG---GAGAATAGATCC	Size	Hit Count	Total Norm	Total
No Reads

droEle1

AG-----------------------------------------------------------------------------------------------------------------------------------------------------------------TAAAGTTGCCTCTAAAACTTAACTTGGAT-------------------------------------GTTCTTGTTTAGAAAGAAGACTGGATCGGCATCCTCAGCTAAAGGAAAAGTACGCAGCATTCATCAAAGGATATAGAGATTTGGCTCACATGGCGTTGGTGAGTCCCGAATCAAAAGTACGATGTCA--ATACTACAAGTCGCATCATTGCGTTCTTAAA---GAAGACAGTTCG	Size	Hit Count	Total Norm	Total
No Reads

droRho1

CA-------------------------------------------------------------------ACATTCT--------------------------------------AC---------------------TCGGCTCAAGTCAGGCGCCTATGCTGTGAGGCTGCCGTTGAAATGCAGTTCTGATTTGCTGGGAGAATCGTATCCCCAAGCCGTGCGTCGATTTCTCTCTCTAGAAAGGAAGCTCAGTCGTCACCCTCAATTGAAGAATCAGTATGCTGCGTTTATAAAAGAGTATTTGGAGTTGGGCCATAGGTCTGCAGTTCCTGCTAATGCGAGCCTCACTCCTCA--GTACTTCCTACCTCACCACTGTGTTTTGAAA---GAGGACAGTTCA	Size	Hit Count	Total Norm	Total
No Reads

droBia1

CA-------------------------------------------------------------------ACATTCC--------------------------------------TA---------------------TCTGCTCAAGTCAGGCGCTTACGGTATTACGCTGCCGTTGAAATGTAGATCTAGTTTGCTGGGAGAATCTTATTCCCAACCA-----------------------------------------------------CTCACAGTGTGCTGCATTAATTAAATAGTATTTGGAGTTGGGGCATTTATCTTTATTTCCTGCTAGTGCGAGAATAACTCCCCA--TTTTTTCCTGCAGCACCTTTGTGTTTTTAAA---GAGGCCAATTAA	Size	Hit Count	Total Norm	Total
No Reads

droTak1

CA-------------------------------------------------------------------ACACTCT--------------------------------------AC---------------------TCGGCTCAAGTCAGGCGCTTATGCTGCGAAGCTGCCGTTGAAATGCAGTTCTGATTTGCTGGGAGAATCGTATTCCCAAGCCGTGCGTCGATTTCTCTCTCTGGAAAGGAAGCTCAGTCGTCACCCTCAATTGCAGAATCAGTATTCTGCGTTTATAAAAGAGTATTTGGAGTTGGGCCATATGTCTGCAGTTCCTGCTAATGCGAGCCTCACTCCTCA--GTACTTCCTACCTCACCACTGTGTTTTGAAA---GAGGACAGTTCA	Size	Hit Count	Total Norm	Total
No Reads

droEug1

TCCTGCCA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGTGGCTCTGGCAGATCCG--------------------------------------------------------------------	Size	Hit Count	Total Norm	Total
No Reads

dm3

AA--------------------------------------------------------------------AATTAC--------------------------------------AC---------------------CCGACTGGCAGCTGGCGATTACTCAGTACGGTTGCCGCTAAAACTCAATTTGGACTCTTTAGGAGATTCCTATCCTCAGTCTTTGCGGAGATTCTTGTCGCTGGAAAGGAAGCTTACAAAGCACCCTGGCTTGAGGGTTAAATATGCGGCGTTCATGAAGGAATATCGTGATCTGGGACATATGTCGCCTGTGCCTGCCTCCGAGGTCAGCTCGTGCAGAAATTTTTTTTACCACATTACTGCGTCATGAAG---GAGGATAGCACT	Size	Hit Count	Total Norm	Total	GSM154618 Ovary	GSM154620 Ovary	GSM154621 Ovary	GSM154622 Ovary	GSM180328 Head	GSM180329 Mixed-body	GSM180330 Embryo	GSM180331 Embryo	GSM180332 Embryo	GSM180333 Embryo	GSM180334 Larvae	GSM180335 Disc	GSM180336 Pupae	GSM180337 S2	GSM231091 Ovary	GSM239041 Head	GSM239050 Head	GSM239051 S2	GSM239052 S2	GSM246084 Head	GSM266765 S2	GSM280082 Ovary	GSM280083 Ovary	GSM280084 Ovary	GSM280085 Testis	GSM280086 Ovary	GSM280087 S2-NP	GSM280088 S2-NP	GSM312995 Head	GSM313160 Head	GSM313161 Head	GSM313162 Head	GSM313163 Head	GSM313164 Head	GSM313165 Head	GSM343287 Embryo	GSM379050 Ovary	GSM379051 Ovary	GSM379052 Ovary	GSM379053 Ovary	GSM379054 Ovary	GSM379055 Ovary	GSM379056 Ovary	GSM379057 Ovary	GSM379058 Ovary	GSM379059 Ovary	GSM379060 Ovary	GSM379061 Ovary	GSM379062 Ovary	GSM379063 Ovary	GSM379064 Ovary	GSM379065 Ovary	GSM379066 Ovary	GSM379067 Ovary	GSM424739 S2	GSM424740 S2	GSM424741 S2	GSM467729 Female-body	GSM467730 Female-body	GSM467731 Female-body	M002 CS	M003 Male-body	M004 Male-body	M005 ML-DmD32	M006 ML-DmD32	M029 OSC	M030 OSC	M031 OSC	M032 S2-R+	M033 S2-R+	M034 S2-R+	M035 S2-R+	M036 S2-R+	M037 S2-R+	M038 S2-R+	M039 S2-R+	M048 S2-R+	OSS2 OSS	OSS6 OSS	OSS7 OSS	OSS8 OSS	S1 Head	S10 Embryo	S11 Embryo	S12 Embryo	S13 Embryo	S14 Embryo	S15 S2-GMR	S16 Kc	S17 Larvae	S18 Larvae	S19 Pupae	S2 Head	S20 Pupae	S21 Disc	S22 Head	S23 Female-body	S24 Male-body	S25 Larvae	S26 Larvae	S27 Pupae	S28 Pupae	S29 Head	S3 Male-body	S30 S2-GMR	S31 S2	S32 S2	S33 Kc	S34 Kc	S35 Kc	S4 Female-body	S5 Disc	S6 Embryo	S7 Embryo	S8 S2	S9 Embryo	SRR001337 Head	SRR001338 Head	SRR001339 Head	SRR001340 Head	SRR001341 Head	SRR001342 Head	SRR001343 Head	SRR001344 Head	SRR001345 Head	SRR001346 Head	SRR001347 Head	SRR001348 Head	SRR001349 Head	SRR001664 Head	SRR010951 Ovary	SRR010952 Ovary	SRR010953 Ovary	SRR010954 Ovary	SRR010955 Ovary	SRR010956 Ovary	SRR010957 Ovary	SRR010958 Ovary	SRR010959 Ovary	SRR010960 Ovary	SRR014268 Embryo	SRR014269 Embryo	SRR014270 Embryo	SRR014271 Embryo	SRR014272 Embryo	SRR014273 Ovary	SRR014274 Ovary	SRR014275 Ovary	SRR014276 Ovary	SRR014277 Ovary	SRR014278 Ovary	SRR014279 Ovary	SRR014280 Ovary	SRR014281 Ovary	SRR014282 Ovary	SRR023197 S2	SRR023399 S2	SRR023400 S2	SRR023402 S2	SRR023407 S2	SRR029028 S2	SRR029029 S2	SRR029030 S2	SRR029031 S2	SRR029032 S2	SRR029033 S2	SRR029608 Head	SRR029633 Head	SRR030145 gb3	SRR031692 Head	SRR031693 Head	SRR031694 Head	SRR031696 Head	SRR031697 Head	SRR031698 Head	SRR031699 Head	SRR031700 Head	SRR031701 Head	SRR031702 Head	SRR031703 Head	SRR031704 Head	SRR032092 S2	SRR032093 S2	SRR032094 S2	SRR032095 S2-NP	SRR032096 S2-NP	SRR032152 Head	SRR060643 Testis	SRR060644 Ovary	SRR060645 Testis	SRR060646 Ovary	SRR060647 Ovary	SRR060648 Ovary	SRR060649 Ovary	SRR060650 Testis	SRR060651 Ovary	SRR060652 Testis	SRR060653 Ovary	SRR065151 Ovary	SRR065152 Ovary	SRR065153 Ovary	SRR065154 Ovary	SRR065155 Ovary	SRR065800 Ovary	SRR065801 Ovary	SRR065802 Ovary	SRR065803 Ovary	SRR065804 Ovary	SRR065805 Ovary	SRR065806 Ovary	SRR065807 Ovary	SRR097865 S2-NP	SRR097866 S2-NP	SRR097867 S2-NP	SRR298536 Ovary	SRR298537 Ovary	SRR298711 Ovary	SRR298712 Ovary	SRR317110 Ovary	SRR317111 Ovary	SRR317112 Ovary	SRR317113 Ovary	SRR317114 Ovary	SRR317115 Ovary	SRR317116 Ovary	SRR317117 Ovary	SRR341115 S2	SRR341116 S2	SRR341117 S2	SRR341118 S2	SRR351332 Mixed-body	SRR351333 Mixed-body	T004 OSC	T005 CME-L1	V001 Embryo	V002 Embryo	V003 S2	V006 Female-body	V007 Head	V008 S2	V009 CME-L1	V010 ML-DmD20-C5	V011 Sg4	V012 Male-body	V013 Head	V014 DTT	V015 DreRFHV	V018 Kc167	V019 GM2	V020 S2-R+	V021 ML-DmD21	V022 ML-DmD32	V023 Head	V024 Kc167	V025 S2-R+	V026 1182-2H	V027 ML-DmD21	V028 CME-W1-Cl.8+	V029 ML-DmD9	V030 ML-DmD8	V031 GM2	V032 S1	V033 CME-W1-Cl.8+	V034 ML-DmD16-C3	V035 ML-DmD32	V036 ML-DmD20-C5	V037 S2	V038 S2	V063 Ovary	V0632 Ovary	V064 Ovary	V0642 Ovary	V065 Ovary	V0652 Ovary	V066 Ovary	V0662 Ovary	V067 S2-NP	V073 mbn2	V074 S3	V075 ML-DmBG1-C1	V076 ML-DmBG3-C2	V077 Head	V078 Head	V079 Head	V080 Head	V081 Embryo	V082 Embryo	V083 Male-body	V084 Female-body	V085 CME-W2	V086 Female-body	V088 Ovary	V0882 Ovary	V089 Ovary	V0892 Ovary	V090 Male-body	V091 fGS/OSS	V092 Male-body	V093 Male-body	V094 S2-R+	V095 S2-R+	V096 Ovary	V097 Ovary	V098 Ovary	V125 ML-DmD9	V126 CME-L1	V127 G2	V128 S3	V129 ML-DmBG1-C1	V130 ML-DmBG3-C2	V131 ML-DmD16-C3	V132 ML-DmD32	V133 Sg4	V134 ML-DmD8	V135 CME-W2	V136 Male-body	V137 Head	V138 Male-body	V139 Female-body	V140 Female-body	V141 Female-body	V142 Female-body	V144 OSC	V145 S2	V146 S1	V147 1182-2H	V148 mbn2	GSM1528798 follicle cells
.................................................................................................................................................................................................................................................................................................TCATGAAGGAATATCGTGATCTGGG..........................................................................................	25	12	83.83	1006	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	5	5	2	0	0	0	0	0	0	0	0	0	1	0	0	8	0	4	0	8	1	2	0	4	1	4	0	7	3	8	0	10	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	7	0	11	0	37	0	13	0	1	25	8	10	19	17	4	11	14	14	13	13	2	10	8	13	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	2	19	0	18	0	0	2	0	47	0	0	0	0	0	1	33	0	0	0	0	5	0	0	0	0	43	0	12	36	36	0	51	0	19	23	25	1	0	0	0	0	0	0	0	0	0	2	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	18	0	0	1	0	0	19	32	21	23	0	0	0	0	0	0	47	27	22	0	0	0	0	0	0	0	0	0	0	0	0	0	0	23	24	20	16	0	0	0	0	0	0
.................................................................................................................................................................................................................................................................................................TCATGAAGGAATATCGTGATCTGGGA.........................................................................................	26	12	53.83	646	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	2	0	5	1	2	0	1	1	2	0	1	0	3	0	1	0	0	0	0	3	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	3	0	13	0	3	0	0	7	2	4	9	5	0	9	12	7	18	11	2	2	7	12	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	7	0	0	0	0	3	0	0	0	0	2	0	0	3	15	0	0	0	0	0	1	0	0	0	44	0	2	6	39	0	57	3	24	34	49	1	0	0	0	0	0	0	0	0	1	1	0	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	11	14	7	13	0	0	0	0	0	0	18	5	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	17	31	46	25	0	0	0	0	0	0
................................................................................................................................................................................................................................GAGATTCTTGTCGCTGGAAAGGAA............................................................................................................................................................	24	20	43.60	872	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	1	2	1	0	0	0	3	0	0	0	3	0	2	2	0	0	0	7	0	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	4	0	0	3	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	22	0	1	0	2	0	2	11	10	0	0	19	25	0	21	12	2	16	19	8	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	1	11	0	20	0	0	0	0	0	0	0	2	0	0	0	4	0	2	0	2	0	0	0	0	0	14	0	0	37	118	1	91	2	34	49	98	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	9	40	0	0	0	0	0	0	0	0	0	17	88	0	0	0	0	0	0	0	0	0	0	0	0	0	0	6	5	4	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................................................................TCATGAAGGAATATCGTGATCTGG...........................................................................................	24	12	43.00	516	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	2	2	0	0	0	0	0	1	0	0	0	0	0	0	2	0	3	0	4	1	2	0	1	0	2	0	4	0	6	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	14	1	22	0	71	2	21	0	0	28	7	5	1	6	12	5	3	2	5	3	1	6	5	4	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	3	1	9	0	10	0	0	8	3	2	0	0	0	0	0	2	7	0	0	0	0	0	0	0	0	0	32	0	5	10	7	0	34	1	4	6	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	2	0	1	0	3	7	12	7	11	0	0	0	0	0	0	17	10	7	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	13	6	4	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................................................TATGCGGCGTTCATGAAGGAATATCG...................................................................................................	26	20	40.45	809	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	6	0	4	0	6	1	1	0	4	0	0	0	9	3	3	0	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	4	4	23	2	5	11	0	3	2	0	9	1	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	0	14	0	1	8	0	3	0	38	0	0	0	0	1	0	13	0	25	5	44	20	61	0	0	0	24	1	22	0	0	0	0	0	15	3	10	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	13	0	0	1	0	0	8	23	25	50	0	0	0	0	0	0	62	70	13	0	0	0	0	0	0	0	0	0	0	0	0	0	0	21	41	0	59	0	0	0	0	0	0
...............................................................................................................................................................................................................................GGAGATTCTTGTCGCTGGAAAGGAA............................................................................................................................................................	25	20	38.45	769	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	1	0	0	0	1	0	0	0	0	4	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	6	0	0	0	0	0	0	0	0	0	8	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	25	0	0	0	0	0	0	0	1	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	0	0	0	10	0	0	1	0	12	0	2	0	0	0	0	2	0	0	0	1	0	0	0	0	0	13	0	2	4	78	1	0	0	106	147	214	1	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	0	0	0	0	0	3	15	7	23	0	0	0	0	0	0	34	0	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	4	7	0	0	0	0	0	9
...............................................................................................................................................................................................................................GGAGATTCTTGTCGCTGGAAAGGA.............................................................................................................................................................	24	20	31.80	636	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	2	0	0	0	0	0	0	0	1	0	0	0	1	0	1	0	0	0	0	4	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	6	4	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	1	1	0	12	0	0	0	0	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	7	1	2	1	0	1	0	10	0	0	1	9	0	0	5	0	0	0	0	0	0	0	0	0	0	0	1	5	50	1	59	2	92	105	149	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	6	1	6	0	0	0	0	0	0	14	18	9	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	7	10	8	0	0	0	0	0	1
................................................................................................................................................................................................................................GAGATTCTTGTCGCTGGAAAGGAAGCT.........................................................................................................................................................	27	20	21.75	435	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	4	0	0	3	0	2	0	0	0	1	0	1	1	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	6	8	10	9	0	30	14	19	0	16	2	12	12	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	9	0	3	0	0	1	1	0	0	0	0	0	1	0	1	0	0	0	7	2	4	0	0	0	36	0	1	44	26	0	10	0	0	7	17	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	3	12	2	3	0	0	0	0	0	0	15	0	16	0	0	0	0	0	0	0	0	0	0	0	0	0	1	11	17	17	8	0	0	0	0	0	1
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.........................................................................................................................................................................................................................................................................................................................................................................................TGCGTCATGAAG---GAGGATAGCACT	24	20	1.95	39	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	5	0	0	10	0	0	0	0	10	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	3	0	0	0	0	0	0
...........................................................................................................................................................................................................................................CGCTGGAAAGGAAGCTTACAAAGCACCC.............................................................................................................................................	28	19	1.95	37	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	2	8	0	0	0	1	0	0	1	1	0	3	0	1	3	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
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........................................................................................................................................................................................................................................................................................................GGAATATCGTGATCTGGGACAT......................................................................................	22	12	0.33	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................................................................................................GAAGGAATATCGTGATCTGGG..........................................................................................	21	12	0.33	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................................................................TTCATGAAGGAATATCGTGATCTGG...........................................................................................	25	12	0.33	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................................................................................................................AAGGAATATCGTGATCTGGGA.........................................................................................	21	12	0.33	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

droSim2

TCT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCTCTCGAGAGAAAGTTTATTCGGAATCCTGTCGTGAAGGATCAGAATGCAGAATTCATGAAGAAGTATCTGGGCATTGGGCATATGTCCCTTGTTCCTTCATCCCTGATCAGTTCTTGCCA--ATACTTCTTACCGCAACACCGTGTCATAAAAAAAAAAGATAACTCG	Size	Hit Count	Total Norm	Total	M023 Head	M024 Male-body	M025 Embryo	M053 Female-body	O001 Testis	O002 Head	SRR553485 Ovary	SRR553486 Ovary	SRR553487 Ovary	SRR553488 Ovary	SRR618934 Ovary	V044 Embryo	SRR902008 Ovary	SRR902009 Testis	SRR1275487 Male larvae	SRR1275485 Male prepupae	SRR1275483 Male prepupae
................................................................................................................................................................................................................................................................................................TTCATGAAGAAGTATCTGGGCATTGGGC........................................................................................	28	1	6.00	6	0	0	0	0	0	0	3	3	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................................................CGTGAAGGATCAGAATGCAGAATTCATG..............................................................................................................	28	1	4.00	4	0	0	0	0	0	0	0	1	2	1	0	0	0	0	0	0	0
....................................................................................................................................................................................................................................................................................................TGAAGAAGTATCTGGGCATTGGGCATA.....................................................................................	27	1	4.00	4	0	0	0	0	0	0	0	1	1	0	0	0	2	0	0	0	0
..........................................................................................................................................................................................................................................................................CGTGAAGGATCAGAATGCAGAATTCA................................................................................................................	26	1	4.00	4	0	0	3	0	0	0	0	0	0	1	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................................................................................TGGGCATTGGGCATATGTCCCTTGT...........................................................................	25	1	3.00	3	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0
..T--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCTCTCGAGAGAAAGTTTATTCGGAA................................................................................................................................................	28	1	3.00	3	0	0	0	0	0	0	0	1	1	1	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................................TCTGGGCATTGGGCATATGTCCCTTGT...........................................................................	27	1	3.00	3	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0
.............................................................................................................................................................................................................................................................TTCGGAATCCTGTCGTGAAGGATCAGA............................................................................................................................	27	1	2.00	2	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................................................................................TGCAGAATTCATGAAGAAGTATCTGGGG...............................................................................................	28	1	2.00	2	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................................................................................................................TCCCTGATCAGTTCTTGCCA--ATACT.........................................	25	1	2.00	2	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0
....................................................................................................................................................................................................................................................................TCCTGTCGTGAAGGATCAGAATGCAGAA....................................................................................................................	28	1	2.00	2	0	0	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................................................AATGCAGAATTCATGAAGAAGT.......................................................................................................	22	1	2.00	2	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0
.........................................................................................................................................................................................................................................................................................TGCAGAATTCATGAAGAAGTATC....................................................................................................	23	1	2.00	2	0	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................................................................................................TCAGAATGCAGAATTCATGAAGAAGT.......................................................................................................	26	1	2.00	2	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0
......................................................................................................................................................................................................................................................................................................AAGAAGTATCTGGGCATTGGGCATA.....................................................................................	25	1	2.00	2	0	0	0	0	0	0	0	0	0	1	0	0	1	0	0	0	0
.........................................................................................................................................................................................................................................................................................TGCAGAATTCATGAAGAAGTATCTGGG................................................................................................	27	1	2.00	2	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0
...................................................................................................................................................................................................................................................................................TCAGAATGCAGAATTCATGAAGAAGTAC.....................................................................................................	28	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0
......................................................................................................................................................................................................................................................................CTGTCGTGAAGGATCAGAATGCAGAA....................................................................................................................	26	1	2.00	2	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................................................................TTCATGAAGAAGTATCTGGGCATTGGGCA.......................................................................................	29	1	2.00	2	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................................................................................................TCAGAATGCAGAATTCATGAAGAAGTA......................................................................................................	27	1	2.00	2	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0
........................................................................................................................................................................................................................................................................................ATGCAGAATTCATGAAGAAGT.......................................................................................................	21	1	2.00	2	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0
........................................................................................................................................................................................................................................................................................ATGCAGAATTCATGAAGAAGTATCTGGG................................................................................................	28	1	1.00	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................................TGTCGTGAAGGATCAGAATGCAGAATT..................................................................................................................	27	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................................TGTCGTGAAGGATCAGAATGCAGAA....................................................................................................................	25	1	1.00	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0
............................................................................................................................................................................................................................................................................................AGAATTCATGAAGAAGTATCTGGGCA..............................................................................................	26	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0
.........................................................................................................................................................................................................................................................................TCGTGAAGGATCAGAATGCAGAATTC.................................................................................................................	26	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................................................................GAAAGTTTATTCGGAATCCTGTCGTG......................................................................................................................................	26	1	1.00	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................................................................TTCATGAAGAAGTATCTGGGCATTGGG.........................................................................................	27	1	1.00	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................................................................................................................TCAGTTCTTGCCA--ATACTTCTTACCGC................................	27	1	1.00	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................................TCTGGGCATTGGGCATATGTCCCT..............................................................................	24	1	1.00	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
......................................................................................................................................................................................................................................................AAGTTTATTCGGAATCCTGTCGTGAA....................................................................................................................................	26	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................CATGAAGAAGTATCTGGGCATTGGGCAA......................................................................................	28	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0
................................................................................................................................................................................................................................................................................................TTCATGAAGAAGTATCTGGGCATTGGGCATA.....................................................................................	31	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................................TGTCGTGAAGGATCAGAATGCAGA.....................................................................................................................	24	1	1.00	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................................................................................................................TGAAGAAGTATCTGGGCATTGGGCAT......................................................................................	26	1	1.00	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................................................TTCGGAATCCTGTCGTGAAGGATCAG.............................................................................................................................	26	1	1.00	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
.............................................................................................................................................................................................................................................................TTCGGAATCCTGTCGTGAAGGATCAGAA...........................................................................................................................	28	1	1.00	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0
............................................................................................................................................................................................................................................................................................................................ATATGTCCCTTGTTCCTTCATCCC................................................................	24	1	1.00	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
....................................................................................................................................................................................................................................................................................................TGAAGAAGTATCTGGGCATTG...........................................................................................	21	1	1.00	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................................................................CTGGGCATTGGGCATATGTCCCTTGT...........................................................................	26	1	1.00	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
.................................................................................................................................................................................................................................................................................................TCATGAAGAAGTATCTGGGCATTGGGCAA......................................................................................	29	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0
......................................................................................................................................................................................................................................................................................................................................TGTTCCTTCATCCCTGATCAGTTCT.....................................................	25	1	1.00	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................................................................................................................TGCCA--ATACTTCTTACCGCAACACCG.........................	26	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................TATTCGGAATCCTGTCGTGAAGGATCAGAA...........................................................................................................................	30	1	1.00	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0
..T--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCTCTCGAGAGAAAGTTTATTCGGA.................................................................................................................................................	27	1	1.00	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................................................................................AGAATTCATGAAGAAGTATCTGGGCAT.............................................................................................	27	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0
.............................................................................................................................................................................................................................................................TTCGGAATCCTGTCGTGAAGGATCA..............................................................................................................................	25	1	1.00	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................................................................................................................................TTCATCCCTGATCAGTTCTTGCCA--ATACT.........................................	29	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................................................................................................................................TACTTCTTACCGCAACACCGTGTCATA..................	27	1	1.00	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................AGTTTATTCGGAATCCTGTCGTGAA....................................................................................................................................	25	1	1.00	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................................TGTCGTGAAGGATCAGAATGC........................................................................................................................	21	1	1.00	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................................................................................TCCTGTCGTGAAGGATCAGAATGCAGAATT..................................................................................................................	30	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................................TCTGGGCATTGGGCATATGTCCCTTGTT..........................................................................	28	1	1.00	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................CGGAATCCTGTCGTGAAG...................................................................................................................................	18	2	0.50	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
..............................................................................................................................................................................................................................................................TCGGAATCCTGTCGTGAAGG..................................................................................................................................	20	2	0.50	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0

droSec2

GG-------------------------------------------------------------------------------------------------------------------------------------------CTTCCATCTGGAGAATTTTCAGTTCGACTTCCTGCAAAGCGCAGCCTGGAAGTGTTAGGATATTCCTATCGACAAGCCTATCGCCCTTTTTTAAATGTGGAAAACAAACTTGAACGCCATCGCCATCTCAATGAAAAGTATTCAGCCTTTATTTAGGAGTACTTATCTTTAAATCATATGTCTCTGGTACCATTTGACTCCCAGAACCTATGCAA--ATTTTATTTGCCGCATCACTGCGTTTTAAAG---GTAGACAGCACA	Size	Hit Count	Total Norm	Total	M054 Female-body	V113 Male-body	V114 Embryo	V115 Head
No Reads

droYak3

AGCGCG-------------------------------------------------------------------CC-GACCCGGAATTTCATAAAGCTCAGCGTGTCGACCTGTTAATAGGAGCTAGCCTGT---------------------------TTGTGA-----------------------------------------------------------------GCTGCTGTGTGGAAAGGAATCTTACAAAGCACCCTGGCTTGAGGGTTAAATATGCGGCGTTCATGAAGGAATATCGTCATCTGGGACATATGTCGCCTGTGCCTGCTTCCGAGGTCAGCTCGTGCCG--ATATTTTTTACCACATCACTGCCTCATGAAG---GAGGATAGCTCT	Size	Hit Count	Total Norm	Total	M026 Head	M043 Female-body	M056 Embryo	V046 Embryo	V052 Head	V058 Head	V120 Male-body	SRR1275488 Male larvae	SRR1275486 Male prepupae	SRR1275484 Male prepupae	GSM1528802 follicle cells
.................................................................................................................................................................................................................................................................................................TCATGAAGGAATATCGTCATCTGGGA.........................................................................................	26	9	12.56	113	0	29	8	0	0	0	3	0	0	0	73
.................................................................................................................................................................................................................................................................................................TCATGAAGGAATATCGTCATCTGGGACA.......................................................................................	28	9	2.67	24	2	21	0	0	0	0	0	0	0	0	1
......................................................................................................TGTCGACCTGTTAATAGGAGCTAGCC....................................................................................................................................................................................................................................................................................	26	1	2.00	2	0	1	1	0	0	0	0	0	0	0	0
......................................................................................................TGTCGACCTGTTAATAGGAGCTAGCCT...................................................................................................................................................................................................................................................................................	27	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
.........................................................................................................CGACCTGTTAATAGGAGCTAGCCTG..................................................................................................................................................................................................................................................................................	25	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................................................................................................................................TATTTTTTACCACATCACTGCCTCA....................	25	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
.................................................................................................................TAATAGGAGCTAGCCTGT---------------------------TTGTGA-----------------------------------------------------------------GC.............................................................................................................................................................................	26	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................................................................AGGAATCTTACAAAGCACCCTGGCTT.......................................................................................................................................	26	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................TTGTGA-----------------------------------------------------------------GCTGCTGTGTGGAAAGGAA............................................................................................................................................................	25	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
.............................................................................................................................................................................................................................................GTGGAAAGGAATCTTACAAAGCACCC.............................................................................................................................................	26	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................................................................................................................................................TTTTTACCACATCACTGCCTCATGAAG---............	27	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................................................................TCATGAAGGAATATCGTCATCTGGGAC........................................................................................	27	9	0.78	7	0	6	1	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................................................................TCATGAAGGAATATCGTCATCTGG...........................................................................................	24	9	0.67	6	0	4	2	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................CATATGTCGCCTGTGCCTGCTTCCGA...............................................................	26	9	0.67	6	0	1	0	0	0	0	0	0	0	0	5
.................................................................................................................................................................................................................................................................................................TCATGAAGGAATATCGTCATCTGGG..........................................................................................	25	9	0.67	6	0	6	0	0	0	0	0	0	0	0	0
.....................................................................................TTTCATAAAGCTCAGCGTGTCGACC......................................................................................................................................................................................................................................................................................................	25	2	0.50	1	0	1	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................CATGAAGGAATATCGTCATCTGGGACA.......................................................................................	27	9	0.44	4	0	3	1	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................................................................................................................TATGTCGCCTGTGCCTGCTTCCGAGG.............................................................	26	10	0.40	4	0	1	0	0	0	0	0	0	0	0	3
..................................................................................................................................................................................................................................................................................................CATGAAGGAATATCGTCATCTGGGA.........................................................................................	25	9	0.33	3	0	3	0	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................................................................................................TATCGTCATCTGGGACATATGTCGCC..............................................................................	26	9	0.33	3	0	1	2	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................................................................TTCATGAAGGAATATCGTCATCTG............................................................................................	24	9	0.33	3	0	0	0	0	0	0	0	0	0	0	3
.................................................................................................................................................................................................................................................................................................TCATGAAGGAATATCGTCATCTG............................................................................................	23	10	0.30	3	0	2	0	0	0	0	0	0	0	0	1
...................................................................................................................................................................................................................................................................................TAAATATGCGGCGTTCATGAAGGAATA......................................................................................................	27	20	0.20	4	0	1	0	0	0	0	0	0	0	0	3
.............................................................................................................................................................................................................................................................................................................................TATGTCGCCTGTGCCTGCTTCCGA...............................................................	24	10	0.20	2	0	2	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................................................................................................................................GCTTCCGAGGTCAGCTCGTGCCG--A.............................................	24	6	0.17	1	0	1	0	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................................................................................................................................TGGGACATATGTCGCCTGTGCCTGCT....................................................................	26	8	0.13	1	0	1	0	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................................................................TTCATGAAGGAATATCGTCATCTGG...........................................................................................	25	8	0.13	1	0	0	0	0	0	0	0	0	0	0	1
..................................................................................................................................................................................................................................................................................................CATGAAGGAATATCGTCATCTGG...........................................................................................	23	9	0.11	1	0	1	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................CATATGTCGCCTGTGCCTGCTTCC.................................................................	24	9	0.11	1	0	0	1	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................................................................................................TATCGTCATCTGGGACATATGTCG................................................................................	24	9	0.11	1	0	0	0	0	0	1	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................CATGAAGGAATATCGTCATCTGGG..........................................................................................	24	9	0.11	1	0	1	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................................................................................TGTCGCCTGTGCCTGCTTCCGAGGT............................................................	25	9	0.11	1	0	1	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................TACAAAGCACCCTGGCTTGAGGGT.................................................................................................................................	24	19	0.11	2	0	2	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................................................................................................................TATGTCGCCTGTGCCTGCTTCCGAG..............................................................	25	10	0.10	1	0	1	0	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................................................................................................TATCGTCATCTGGGACATATGTCC................................................................................	24	10	0.10	1	0	0	1	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................................................................................................................TGAAGGAATATCGTCATCTGGGACAT......................................................................................	26	10	0.10	1	0	0	0	0	0	0	1	0	0	0	0
............................................................................................................................................................................................................................................................................................................TATCGTCATCTGGGACATATGTC.................................................................................	23	10	0.10	1	0	1	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................................TCGTCATCTGGGACATATGTCGCC..............................................................................	24	11	0.09	1	0	0	1	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................................................................TCATGAAGGAATATCGTCATCTGGGTA........................................................................................	27	11	0.09	1	0	1	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................................TCGTCATCTGGGACATATGTCGCCTG............................................................................	26	11	0.09	1	0	1	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................................................................CGTCATCTGGGACATATGTCGCCTG............................................................................	25	11	0.09	1	0	1	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................................................................CGTCATCTGGGACATATGTCGCCT.............................................................................	24	11	0.09	1	0	0	1	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................................................................................TCATCTGGGACATATGTCGCCTGTGCC........................................................................	27	11	0.09	1	0	1	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................................................................TCATGAAGGAATATCGTCATC..............................................................................................	21	12	0.08	1	0	0	1	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................................................TATGCGGCGTTCATGAAGGAATATCG...................................................................................................	26	20	0.05	1	0	0	0	1	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................................................................ATGCGGCGTTCATGAAGGAATATCG...................................................................................................	25	20	0.05	1	0	1	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................TACAAAGCACCCTGGCTTGAGG...................................................................................................................................	22	20	0.05	1	0	1	0	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................................................................................................................TCCGAGGTCAGCTCGTGCCG--ATATT.........................................	25	20	0.05	1	0	1	0	0	0	0	0	0	0	0	0

droEre2

TCT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCTCTTTAGAGGAAGCTTAATTGGAGTCCTGTCGTGAAGGATCAGTATTCTGCATTCATGAAGGAGTATTTGGAGT--------ATT------------TCATCCCCGATCAGTTCTTGCCG--ATACTTCTTACCGCATCACTGTGTCATGAAA---GAAGATAGCTCT	Size	Hit Count	Total Norm	Total	M055 Female-body	M057 Embryo	V060 Head	V040 Embryo	V107 Male-body	V108 Head	GSM1528801 follicle cells
No Reads

dp5

GCTAGAT------------------------------------------TGTGAAGCACACTTTGTGCAGCATTTC--------------------------------------CG---------------------TCGACTACATAAAGGCGATTATTGTAGTCGGC----------------------------TGGAGAATTTTACATTCAAGCGCTTCGTAGATTCCTGACCCTTGAGAGAAAGTTAGATCGTCACCCTGATGTTAAATCTCAGTATGCAGTATTTATAAAGGAGTACCTTGATTTAGGCCATATGTCTCAGGTTCCTACCCAGTCAATCAGCAACTGCCG--ATATTTTTTGCCTCACAATTGCGTCATGAAG---GAAGATAGTTCT	Size	Hit Count	Total Norm	Total	M022 Male-body	M040 Female-body	M059 Embryo	M062 Head	V043 Embryo	V051 Head	V112 Male-body	SRR902010 Ovary	SRR902011 Testis	SRR902012 CNS imaginal disc
.............................................................................................................................................................................................................................TCGTAGATTCCTGACCCTTGAGAG...............................................................................................................................................................	24	16	21.19	339	2	173	1	1	0	1	8	68	85	0
.............................................................................................................................................................................................................................TCGTAGATTCCTGACCCTTGAGAGA..............................................................................................................................................................	25	15	12.00	180	2	88	1	0	0	0	0	16	73	0
.............................................................................................................................................................................................................................TCGTAGATTCCTGACCCTTGAGA................................................................................................................................................................	23	18	7.44	134	0	112	2	0	0	0	1	12	7	0
.............................................................................................................................................................................................................................TCGTAGATTCCTGACCCTTGAGAGAAA............................................................................................................................................................	27	15	6.93	104	5	26	0	0	0	0	0	29	44	0
.............................................................................................................................................................................................................................TCGTAGATTCCTGACCCTTGAGAGAAAG...........................................................................................................................................................	28	15	5.60	84	1	55	0	0	0	0	0	0	28	0
.............................................................................................................................................................................................................................TCGTAGATTCCTGACCCTTGAGAGAA.............................................................................................................................................................	26	15	4.73	71	0	22	0	0	0	0	0	18	31	0
.............................................................................................................................................................................................................................TCGTAGATTCCTGACCCTTGAG.................................................................................................................................................................	22	18	3.06	55	0	34	0	0	0	0	1	15	5	0
............................................................................................................................................................................................................................TTCGTAGATTCCTGACCCTTGAGAG...............................................................................................................................................................	25	16	2.31	37	0	13	0	0	0	0	0	4	20	0
.............................................................................................................................................................................................................................TCGTAGATTCCTGACCCTTG...................................................................................................................................................................	20	20	1.25	25	0	23	0	0	0	0	0	0	2	0
........................................................................TTTC--------------------------------------CG---------------------TCGACTACATAAAGGC...........................................................................................................................................................................................................................................................	22	15	1.13	17	2	8	0	0	0	0	0	0	7	0
........................................................................TTTC--------------------------------------CG---------------------TCGACTACATAAAGGCG..........................................................................................................................................................................................................................................................	23	14	1.07	15	0	8	0	0	0	0	0	2	5	0
............................................................................................................................................................................................................................TTCGTAGATTCCTGACCCTTGAGAGA..............................................................................................................................................................	26	15	1.00	15	0	4	0	0	0	0	0	0	11	0
........................................................................TTTC--------------------------------------CG---------------------TCGACTACATAAAGGCGA.........................................................................................................................................................................................................................................................	24	14	1.00	14	0	5	2	0	0	0	1	4	2	0
.........................................................................................................................................................................................................................................................................................................................................................................................TGCGTCATGAAG---GAAGATAGTTC.	23	20	1.00	20	0	18	0	0	0	0	2	0	0	0
................................................................................................................................................................................................................................TAGATTCCTGACCCTTGAGAGAAAGT..........................................................................................................................................................	26	17	1.00	17	0	5	0	0	0	0	0	0	12	0
...............................................................................................................................................................TGTAGTCGGC----------------------------TGGAGAATTTTACAT................................................................................................................................................................................................	25	1	1.00	1	0	0	0	0	0	0	0	0	1	0
.............................................................................................................................................................................................................................TCGTAGATTCCTGACCCTTGA..................................................................................................................................................................	21	20	0.90	18	0	18	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................................................................................................................................................................................TGCGTCATGAAG---GAAGATAGTTCT	24	20	0.80	16	0	13	0	0	0	0	1	2	0	0
..............................................................................................................................................................................................................................CGTAGATTCCTGACCCTTGAGAG...............................................................................................................................................................	23	16	0.69	11	0	8	0	0	0	0	0	3	0	0
.............................................................................................................................................................................................................................TCGTAGATTCCTGACCCTTGAGAGT..............................................................................................................................................................	25	16	0.69	11	0	5	0	0	1	0	0	4	1	0
........................................................................TTTC--------------------------------------CG---------------------TCGACTACATAAAGGCGATTA......................................................................................................................................................................................................................................................	27	13	0.62	8	0	0	0	0	0	0	0	0	8	0
....................................................................................................................................................................................................................TCAAGCGCTTCGTAGATTCCTGACC.......................................................................................................................................................................	25	16	0.56	9	0	1	1	0	0	0	0	0	7	0
..............................................................................................................................................................................................................................CGTAGATTCCTGACCCTTGAGA................................................................................................................................................................	22	18	0.56	10	0	10	0	0	0	0	0	0	0	0
........................................................................TTTC--------------------------------------CG---------------------TCGACTACATAAAGGCGATTAT.....................................................................................................................................................................................................................................................	28	13	0.54	7	0	0	0	0	0	0	0	1	6	0
..............................................................................................................................................................................................................................CGTAGATTCCTGACCCTTGAGAGA..............................................................................................................................................................	24	15	0.47	7	0	7	0	0	0	0	0	0	0	0
........................................................................TTTC--------------------------------------CG---------------------TCGACTACATAAAGGCGATT.......................................................................................................................................................................................................................................................	26	13	0.46	6	0	1	0	0	0	0	0	0	5	0
..........................................................................................................................................................................................................................GCTTCGTAGATTCCTGACCCTTGA..................................................................................................................................................................	24	20	0.45	9	0	8	0	0	0	0	0	0	1	0
.............................................................................................................................................................................................................................TCGTAGATTCCTGACCCTTGAGAA...............................................................................................................................................................	24	18	0.44	8	0	5	2	0	0	0	0	1	0	0
....................................................................................................................................................................................................................TCAAGCGCTTCGTAGATTCCTGACCCT.....................................................................................................................................................................	27	16	0.44	7	0	0	0	0	0	0	0	0	7	0
.............................................................................................................................................................................................................................TCGTAGATTCCTGACCCTTGAGAGAAAGT..........................................................................................................................................................	29	14	0.43	6	0	6	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................GTAGATTCCTGACCCTTGAGAGAAAGT..........................................................................................................................................................	27	17	0.41	7	0	3	0	0	0	0	0	0	4	0
................................................................................................................................................................................................................................TAGATTCCTGACCCTTGAGAGAAAG...........................................................................................................................................................	25	18	0.39	7	0	1	0	0	0	0	0	2	4	0
........................................................................TTTC--------------------------------------CG---------------------TCGACTACATAAAGGCGAT........................................................................................................................................................................................................................................................	25	13	0.38	5	0	0	0	0	0	0	0	3	2	0
....................................................................................................................................................................................................................TCAAGCGCTTCGTAGATTCCTGACCC......................................................................................................................................................................	26	16	0.38	6	1	1	0	0	0	0	1	0	3	0
..........................................................................................................................................................................................................................GCTTCGTAGATTCCTGACCCTTG...................................................................................................................................................................	23	20	0.30	6	0	6	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................................................................................................................TCAGCAACTGCCG--ATATTTTTTGCC..................................	25	19	0.26	5	0	4	1	0	0	0	0	0	0	0
........................................................................................................................................................................................................................GCGCTTCGTAGATTCCTGACCC......................................................................................................................................................................	22	20	0.25	5	0	0	0	0	0	0	0	4	1	0
.......................................................................................................................................................................................................................................................................................................................................................TCAGCAACTGCCG--ATATTTTTTGCCT.................................	26	18	0.22	4	0	4	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................TTCGTAGATTCCTGACCCTTGAGA................................................................................................................................................................	24	18	0.22	4	0	2	0	0	0	0	0	0	2	0
.................................................................................................................................................................................................................................................................................................TTATAAAGGAGTACCTTGATTTAGG..........................................................................................	25	14	0.21	3	0	0	0	0	0	0	0	0	3	0
...................................................................................................................................................................................................................................................................................................ATAAAGGAGTACCTTGATTTAGGCCAT......................................................................................	27	14	0.21	3	0	0	0	0	0	0	0	0	3	0
............................................................................................................................................................................................................................................................................................................................ATATGTCTCAGGTTCCTACCCA..................................................................	22	19	0.21	4	0	4	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................................................................................................................................................................................TGCGTCATGAAG---GAAGATAGTT..	22	20	0.20	4	0	4	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................TCGTAGATTCCTGACCCTTGAGAGAAT............................................................................................................................................................	27	15	0.20	3	0	1	0	0	0	0	0	2	0	0
..............................................................................................................................................................................................................................CGTAGATTCCTGACCCTTGAGAGAAA............................................................................................................................................................	26	15	0.20	3	0	2	0	0	0	0	0	0	1	0
.................................................................................................................................................................................................................................................................................................................TGATTTAGGCCATATGTCTCAGGT...........................................................................	24	16	0.19	3	0	2	0	0	0	0	0	0	1	0
............................................................................................................................................................................................................................................................................................................................................TACCCAGTCAATCAGCAACTGCCG--ATA...........................................	27	11	0.18	2	0	1	0	0	0	0	0	1	0	0
........................................................................TTTC--------------------------------------CG---------------------TCGACTACATAAAGG............................................................................................................................................................................................................................................................	21	17	0.18	3	0	1	0	0	0	0	0	0	2	0
............................................................................................................................................................................................................................................................................................................................ATATGTCTCAGGTTCCTACCCAGTC...............................................................	25	12	0.17	2	0	2	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................................................................................................................................TACCCAGTCAATCAGCAACTGCCG--A.............................................	25	12	0.17	2	0	0	0	0	0	0	0	0	2	0
.............................................................................................................................................................................................................................................................................................................................TATGTCTCAGGTTCCTACCCAGTCAA.............................................................	26	12	0.17	2	0	2	0	0	0	0	0	0	0	0
..........................................................................................................................................CGACTACATAAAGGCGATTATTG...................................................................................................................................................................................................................................................	23	12	0.17	2	0	1	0	0	0	0	1	0	0	0
............................................................................................................................................ACTACATAAAGGCGATTATTG...................................................................................................................................................................................................................................................	21	12	0.17	2	0	2	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................................................................................................................................TCCTACCCAGTCAATCAGCAACTGCC.................................................	26	13	0.15	2	0	2	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................TCGTAGATTCCTGACCCTT....................................................................................................................................................................	19	20	0.15	3	0	0	0	0	0	0	0	0	3	0
..............................................................................................................................................................................................................................CGTAGATTCCTGACCCTTGA..................................................................................................................................................................	20	20	0.15	3	0	3	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................TTCGTAGATTCCTGACCCTTGA..................................................................................................................................................................	22	20	0.15	3	0	1	0	0	0	0	0	0	2	0
........................................................................................................................................................................................................................................................................................................................................................................................TTGCGTCATGAAG---GAAGATAGTTC.	24	20	0.15	3	0	2	0	0	0	0	1	0	0	0
....................................................................................................................................................................................................................................................................................................TAAAGGAGTACCTTGATTTAGGC.........................................................................................	23	14	0.14	2	0	1	0	1	0	0	0	0	0	0
....................................................................................................................................................................................................................................................................................................................................CAGGTTCCTACCCAGTCAATCAG.........................................................	23	14	0.14	2	0	2	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................TTCGTAGATTCCTGACCCTTGAGAGAA.............................................................................................................................................................	27	15	0.13	2	0	1	0	0	0	0	0	0	1	0
..............................................................................................................................................................................................................................CGTAGATTCCTGACCCTTGAGAGAA.............................................................................................................................................................	25	15	0.13	2	0	2	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................................................................................TGATTTAGGCCATATGTCTCAGGTTC.........................................................................	26	15	0.13	2	0	0	0	0	0	0	0	0	2	0
................................................................................................................................................................................................................................TAGATTCCTGACCCTTGAGAGAAA............................................................................................................................................................	24	18	0.11	2	0	2	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................................................................................................................................TAGGCCATATGTCTCAGGTTCCTACCC...................................................................	27	18	0.11	2	0	2	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................................................................................................................TCAGCAACTGCCG--ATATTTTTTGCCTC................................	27	18	0.11	2	0	2	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................CTTCGTAGATTCCTGACCCTTGAG.................................................................................................................................................................	24	18	0.11	2	0	1	0	0	0	0	0	0	1	0
............................................................................................................................................................................................................................TTCGTAGATTCCTGACCCTTGAGAA...............................................................................................................................................................	25	18	0.11	2	0	2	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................GTAGATTCCTGACCCTTGAGAGA..............................................................................................................................................................	23	18	0.11	2	0	1	1	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................TCGTAGATTCCTGACCCTTGAGG................................................................................................................................................................	23	18	0.11	2	2	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................CGTAGATTCCTGACCCTTGAG.................................................................................................................................................................	21	18	0.11	2	0	2	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................................................................................................................ATATGTCTCAGGTTCCTACCC...................................................................	21	19	0.11	2	0	2	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................CAACTGCCG--ATATTTTTTGCCTCA...............................	24	19	0.11	2	0	2	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................GCGCTTCGTAGATTCCTGACCCTTG...................................................................................................................................................................	25	19	0.11	2	0	2	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................AGATTCCTGACCCTTGAGAGAAAG...........................................................................................................................................................	24	19	0.11	2	0	2	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................CGTAGATTCCTGACCCTTG...................................................................................................................................................................	19	20	0.10	2	0	2	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................................AAGCGCTTCGTAGATTCCTGACCC......................................................................................................................................................................	24	20	0.10	2	0	0	0	0	0	0	0	0	2	0
....................................................................................................................................................................................................................TCAAGCGCTTCGTAGATTCC............................................................................................................................................................................	20	20	0.10	2	0	2	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................GCTTCGTAGATTCCTGACCCTT....................................................................................................................................................................	22	20	0.10	2	0	2	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................CGCTTCGTAGATTCCTGACCCTT....................................................................................................................................................................	23	20	0.10	2	0	2	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................TCGTAGATTCCTGACCCTTGAA.................................................................................................................................................................	22	20	0.10	2	0	0	0	0	0	0	0	2	0	0
........................................................................................................................................................................................................................GCGCTTCGTAGATTCCTGACC.......................................................................................................................................................................	21	20	0.10	2	0	0	0	0	0	0	0	2	0	0
.............................................................................................................................................................................................................................................................................................................................TATGTCTCAGGTTCCTACCCAGTCA..............................................................	25	12	0.08	1	0	1	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................................................................................................................TATGTCTCAGGTTCCTACCCAGT................................................................	23	12	0.08	1	0	1	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................................................................................................................ATATGTCTCAGGTTCCTACCCAGT................................................................	24	12	0.08	1	0	1	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................................................................................................................TTCCTACCCAGTCAATCAGCAACTGCCG--A.............................................	29	12	0.08	1	0	1	0	0	0	0	0	0	0	0
......................................................................CATTTC--------------------------------------CG---------------------TCGACTACATAAAGGCG..........................................................................................................................................................................................................................................................	25	13	0.08	1	0	1	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................................................................................................................................ACCCAGTCAATCAGCAACTGCC.................................................	22	13	0.08	1	0	1	0	0	0	0	0	0	0	0
...........................................................................C--------------------------------------CG---------------------TCGACTACATAAAGGCGATTAT.....................................................................................................................................................................................................................................................	25	13	0.08	1	0	1	0	0	0	0	0	0	0	0
.........................................................................TTC--------------------------------------CG---------------------TCGACTACATAAAGGCGATTCA.....................................................................................................................................................................................................................................................	27	13	0.08	1	0	0	0	0	0	0	0	0	1	0
.............................................................................................................................................................................................................................................................................................................................................ACCCAGTCAATCAGCAACTGC..................................................	21	13	0.08	1	0	1	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................................................................................................TCTCAGGTTCCTACCCAGTCAAT............................................................	23	13	0.08	1	0	1	0	0	0	0	0	0	0	0
.........................................................................TTC--------------------------------------CG---------------------TCGACTACATAAAGGCGATTA......................................................................................................................................................................................................................................................	26	13	0.08	1	0	0	0	0	0	0	0	0	1	0
........................................................................................................................................................................................................................................................................................................................................TTCCTACCCAGTCAATCAGCAACTG...................................................	25	14	0.07	1	0	1	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................CGTAGATTCCTGACCCTTGAGAGAAAGT..........................................................................................................................................................	28	14	0.07	1	0	1	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................................................................................................................................................TCAGGTTCCTACCCAGTCAATCAGCAAC.....................................................	28	14	0.07	1	0	0	1	0	0	0	0	0	0	0
....................................................................................................................................................................................................................................................................................................................................CAGGTTCCTACCCAGTCAATCAGCA.......................................................	25	14	0.07	1	0	1	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................................................................................................................................................CAGGTTCCTACCCAGTCAATCAGCAAC.....................................................	27	14	0.07	1	0	1	0	0	0	0	0	0	0	0
.........................................................................TTC--------------------------------------CG---------------------TCGACTACATAAAGGCG..........................................................................................................................................................................................................................................................	22	14	0.07	1	0	1	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................TCGTAGATTCCTGACCCTTGAGAGAG.............................................................................................................................................................	26	15	0.07	1	0	1	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................TGACCCTTGAGAGAAAGTTAGATCG...................................................................................................................................................	25	15	0.07	1	0	1	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................................................................................................TACCTTGATTTAGGCCATATGTC.................................................................................	23	15	0.07	1	0	1	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................CGTAGATTCCTGACCCTTGAGAGAAAG...........................................................................................................................................................	27	15	0.07	1	0	1	0	0	0	0	0	0	0	0
..TAGAT------------------------------------------TGTGAAGCACACTTTGTGCAGCAT...........................................................................................................................................................................................................................................................................................................................................	29	15	0.07	1	0	1	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................CGTAGATTCCTGACCCTTGAGAGAAAA...........................................................................................................................................................	27	15	0.07	1	0	0	0	0	0	0	0	1	0	0
............................................................................................................................................................................................................................TTCGTAGATTCCTGACCCTTGAGAGAAA............................................................................................................................................................	28	15	0.07	1	0	0	0	0	0	0	0	0	1	0
..TAGAT------------------------------------------TGTGAAGCACACTTTGTGCAGCA............................................................................................................................................................................................................................................................................................................................................	28	15	0.07	1	0	1	0	0	0	0	0	0	0	0
..............................................................................................................................................TACATAAAGGCGATTATTGT..................................................................................................................................................................................................................................................	20	15	0.07	1	0	1	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................................................................................................................TCAGCAACTGCCG--ATATTTTTTGCCTCAC..............................	29	15	0.07	1	0	1	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................................................................................................................AGTCAATCAGCAACTGCCG--ATATT.........................................	24	15	0.07	1	0	1	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................................................................................TTGATTTAGGCCATATGTCTCAGGT...........................................................................	25	16	0.06	1	0	1	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................CAACTGCCG--ATATTTTTTGCCTCAC..............................	25	16	0.06	1	0	1	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................................................GTCAATCAGCAACTGCCG--ATATTT........................................	24	16	0.06	1	0	1	0	0	0	0	0	0	0	0
.................................................................TGCAGCATTTC--------------------------------------CG---------------------TCGACTACATAAAGG............................................................................................................................................................................................................................................................	28	16	0.06	1	0	0	0	0	0	0	1	0	0	0
......................................................................CATTTC--------------------------------------CG---------------------TCGACTACATAAAGG............................................................................................................................................................................................................................................................	23	16	0.06	1	0	0	0	0	0	0	0	0	1	0
............................................................................................................................................................................................................................................................................................................TACCTTGATTTAGGCCATATG...................................................................................	21	16	0.06	1	0	1	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................................TCAAGCGCTTCGTAGATTCCTGAC........................................................................................................................................................................	24	17	0.06	1	0	1	0	0	0	0	0	0	0	0
.........................................................................TTC--------------------------------------CG---------------------TCGACTACATAAAGG............................................................................................................................................................................................................................................................	20	17	0.06	1	0	1	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................TAGATTCCTGACCCTTGAGAGAAAGTT.........................................................................................................................................................	27	17	0.06	1	0	1	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................................................................................................................TTAGGCCATATGTCTCAGGTTCCTAC.....................................................................	26	17	0.06	1	0	1	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................................................................................................................................................................TCAATCAGCAACTGCCG--ATATTT........................................	23	17	0.06	1	0	1	0	0	0	0	0	0	0	0
......T------------------------------------------TGTGAAGCACACTTTGTGC................................................................................................................................................................................................................................................................................................................................................	20	18	0.06	1	0	1	0	0	0	0	0	0	0	0
...................................................TGAAGCACACTTTGTGCAGCATA..........................................................................................................................................................................................................................................................................................................................................	23	18	0.06	1	0	0	0	0	0	0	0	0	1	0
..........................................................................................................................................................................................................................GCTTCGTAGATTCCTGACCCTTGAG.................................................................................................................................................................	25	18	0.06	1	0	1	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................GCTTCGTAGATTCCTGACCCTTGAGA................................................................................................................................................................	26	18	0.06	1	0	1	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................AGATTCCTGACCCTTGAGAGAAAGT..........................................................................................................................................................	25	18	0.06	1	0	1	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................................................................................................................................GCAACTGCCG--ATATTTTTTGCCT.................................	23	18	0.06	1	0	1	0	0	0	0	0	0	0	0
..........................................................CACTTTGTGCAGCATTTC--------------------------------------CG---------------------TCGAC......................................................................................................................................................................................................................................................................	25	18	0.06	1	0	0	0	0	0	0	1	0	0	0
......................................................................................................................................................................................................................................................................................................................TAGGCCATATGTCTCAGGTTCCTACCCA..................................................................	28	18	0.06	1	0	1	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................CAAGCGCTTCGTAGATTCCTGACCCT.....................................................................................................................................................................	26	18	0.06	1	0	0	0	0	0	0	0	0	1	0
......................................................................................................................................................................................................................................................................................................................TAGGCCATATGTCTCAGGTTCCTACCCAG.................................................................	29	18	0.06	1	0	1	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................CGTAGATTCCTGACCCTTGAGAA...............................................................................................................................................................	23	18	0.06	1	0	1	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................................................................................................................TTAGGCCATATGTCTCAGGTTCC........................................................................	23	18	0.06	1	0	0	1	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................TCGTAGATTCCTGACCCTTGAGC................................................................................................................................................................	23	18	0.06	1	0	1	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................................................................................................................TATGTCTCAGGTTCCTACC....................................................................	19	19	0.05	1	0	1	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................................................................................................CCATATGTCTCAGGTTCCTACC....................................................................	22	19	0.05	1	0	1	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................GATTTAGGCCATATGTCTCAG.............................................................................	21	19	0.05	1	0	1	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................CATATGTCTCAGGTTCCTACC....................................................................	21	19	0.05	1	0	1	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................................................................................................................TATGTCTCAGGTTCCTACCCA..................................................................	21	19	0.05	1	0	1	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................AGATTCCTGACCCTTGAGAGAAA............................................................................................................................................................	23	19	0.05	1	0	1	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................CATATGTCTCAGGTTCCTAC.....................................................................	20	19	0.05	1	0	1	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................................................................................................................TATGTCTCAGGTTCCTACCCAG.................................................................	22	19	0.05	1	0	1	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................GATTTAGGCCATATGTCTCAGGT...........................................................................	23	19	0.05	1	0	1	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................GATTTAGGCCATATGTCTCAGGCA..........................................................................	24	19	0.05	1	0	1	0	0	0	0	0	0	0	0
...............................................................TGTGCAGCATTTC--------------------------------------CG---------------------TCGACT.....................................................................................................................................................................................................................................................................	21	19	0.05	1	0	1	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................TCGTAGATTCCTGACC.......................................................................................................................................................................	16	20	0.05	1	0	0	0	0	0	0	0	1	0	0
.............................................................................................................................................................................................................................TCGTAGATTCCTGACCCT.....................................................................................................................................................................	18	20	0.05	1	0	1	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................CGCTTCGTAGATTCCTGACC.......................................................................................................................................................................	20	20	0.05	1	0	1	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................CGTAGATTCCTGACCCTTGAA.................................................................................................................................................................	21	20	0.05	1	0	1	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................................................................................................................................................................................TGCGTCATGAAG---GAAGATAGTTCA	24	20	0.05	1	0	1	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................................................................................................................................................................................TGCGTCATGAAG---GAAGATA.....	19	20	0.05	1	0	1	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................................AAGCGCTTCGTAGATTCCTG..........................................................................................................................................................................	20	20	0.05	1	0	0	0	0	0	0	1	0	0	0
..........................................................................................................................................................................................................................GCTTCGTAGATTCCTGACCCTTGAA.................................................................................................................................................................	25	20	0.05	1	0	1	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................TTCGTAGATTCCTGACCCTTG...................................................................................................................................................................	21	20	0.05	1	0	1	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................................................................................................................................................AACTGCCG--ATATTTTTTGCC..................................	20	20	0.05	1	0	1	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................TCGTAGATTCCTGACCCTTGAGT................................................................................................................................................................	23	20	0.05	1	0	0	0	1	0	0	0	0	0	0
...........................................................................................................................................................................................................................CTTCGTAGATTCCTGACCCTT....................................................................................................................................................................	21	20	0.05	1	0	1	0	0	0	0	0	0	0	0

droPer2

TCCATCTA------------------ACATACCACT-----------------------------------AGCT-GATCCGGAGTTTTATAAGCCGCAGCGCGTCGATCTGCTAATTGGCGCAAGTCTGCGGCATTTCGACTATATAAAGGCGATTATTGTGTTCGGCTGCCAGCAAAATATAATTTGGATCTCCTTGGAGAATCTTACAATCAAGCGCTTCGTAGATTCCTGACCCTTGAGAGATAGTTAGATCGTCGCCCTGATGTTAAATCTCAGTATGCAGCATTTATAAAGGAGTACCTTGATTTAGGCCATATGTCTCAGGTTTCTACCCAGTCAATCAGCAACTGCCG--ATATTTTTTGCCTCATCATTGCGTCATGAAG---GAAGATAGTTCT	Size	Hit Count	Total Norm	Total	M021 Embryo	M042 Female-body	V042 Embryo	V050 Head	V057 Head	V111 Male-body
..............................................................................................................................................................................................................................................................................................................................................................................TGCCTCATCATTGCGTCATGAAG---G...........	24	1	1.00	1	0	1	0	0	0	0
..............................................................................................................................................................................................................................................................................................................................................................................TGCCTCATCATTGCGTCATG..................	20	2	0.50	1	0	1	0	0	0	0
.............................................................................................................................................................................................................................TCGTAGATTCCTGACCCTTGAGAG...............................................................................................................................................................	24	20	0.30	6	6	0	0	0	0	0
..........................................................................................................................................................................................................................GCTTCGTAGATTCCTGACCCTTGA..................................................................................................................................................................	24	20	0.20	4	0	4	0	0	0	0
..........................................................................................................................................................................................................................GCTTCGTAGATTCCTGACCCTTG...................................................................................................................................................................	23	20	0.15	3	0	3	0	0	0	0
..................................................................................................................................................................................................................................................................................CTCAGTATGCAGCATTTATAAAGGA.........................................................................................................	25	20	0.10	2	0	0	0	0	0	2
......TA------------------ACATACCACT-----------------------------------AGCT-GATCCGGAGTT.............................................................................................................................................................................................................................................................................................................................	27	20	0.10	2	0	2	0	0	0	0
...............................................................................................................................................................................................................TACAATCAAGCGCTTCGTAGATTCCTGA.........................................................................................................................................................................	28	20	0.10	2	0	2	0	0	0	0
.............................................................................ATCCGGAGTTTTATAAGCC....................................................................................................................................................................................................................................................................................................................	19	20	0.05	1	0	0	1	0	0	0
.................................................................................................................................................................................................................................................................................TCTCAGTATGCAGCATTTATAAAGG..........................................................................................................	25	20	0.05	1	0	0	1	0	0	0
..................................................................................................................................................TAAAGGCGATTATTGTGTTC..............................................................................................................................................................................................................................................	20	20	0.05	1	0	0	0	0	0	1
.....................................................................................TTTTATAAGCCGCAGCGCGTCGATC......................................................................................................................................................................................................................................................................................................	25	20	0.05	1	0	1	0	0	0	0
.......A------------------ACATACCACT-----------------------------------AGCT-GATCCGGAGT..............................................................................................................................................................................................................................................................................................................................	25	20	0.05	1	0	1	0	0	0	0

droVir3

ATA--------------------------------------------------------------------ACTTC--------------------------------------TC---------------------CCGTTTACAATCCGGCGAGTATTCAGTGCGGTTCCCTCTGAAACGGAGTGCTGAGCATCTAGGAGAGTCTTATGGCCAGGCTCATCTTCGATTTCTCGGTCTTGAGCGAAAATTGTGTCGGAATTCGCATCTGAAGGAGCAGTATTCGGCATTCATCAAAGAGTTTCTGGATCTAAATCACATGTCGCGAGTTAGTACAGTT--GAGAGGCTGTTGTAA--ATACTTCCTCCCACATCATTGTGTCTTGAAA------GACAGCACC	Size	Hit Count	Total Norm	Total	M027 Male-body	M028 Head	M047 Female-body	M061 Embryo	SRR060654 Ovary	SRR060655 Testis	SRR060656 Ovary	SRR060657 Testis	SRR060658 Ovary	SRR060659 Testis	SRR060660 Ovary	SRR060661 Embryo	SRR060662 Embryo	SRR060663 Embryo	SRR060664 Male-body	SRR060665 Female-body	SRR060666 Male-body	SRR060667 Female-body	SRR060668 Male-body	SRR060669 Female-body	SRR060670 Testis	SRR060671 Male-body	SRR060672 Female-body	SRR060673 Ovary	SRR060674 Ovary	SRR060675 Ovary	SRR060676 Ovary	SRR060677 Ovary	SRR060678 Testis	SRR060679 Testis	SRR060680 Testis	SRR060681 Testis	SRR060682 Embryo	SRR060683 Testis	SRR060684 Embryo	SRR060685 Embryo	SRR060686 Embryo	SRR060687 Embryo	SRR060688 Ovary	SRR060689 Testis	SRR1106712 embryo_0-2h	SRR1106713 embryo_0-2h	SRR1106714 embryo_2-4h	SRR1106715 embryo_4-6h	SRR1106716 embryo_4-6h	SRR1106717 embryo_6-8h	SRR1106718 embryo_6-8h	SRR1106719 embryo_8-10h	SRR1106720 embryo_8-10h	SRR1106721 embryo_10-12h	SRR1106722 embryo_10-12h	SRR1106723 embryo_12-14h	SRR1106724 embryo_12-14h	SRR1106725 embryo_14-16h	SRR1106726 embryo_14-16h	SRR1106727 larvae	SRR1106728 larvae	SRR1106729 mixed whole adult body	SRR1106730 embryo_16-30h	V047 Embryo	V053 Head	V116 Male-body	GSM1528803 follicle cells
.TA--------------------------------------------------------------------ACTTC--------------------------------------TC---------------------CCGTTTACAATCCGGCGAG........................................................................................................................................................................................................................................................	28	4	2.00	8	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................CTGTTGTAA--ATACTTCCTCCCACA...............................	24	13	1.38	18	0	0	18	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................CTGTTGTAA--ATACTTCCTCCCA.................................	22	14	1.36	19	1	0	18	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................CTGTTGTAA--ATACTTCCTCCCAC................................	23	13	1.31	17	0	0	16	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................................................................ATCTGAAGGAGCAGTATTCGGC.....................................................................................................................	22	20	0.85	17	0	0	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	4	6	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
ATA--------------------------------------------------------------------ACTTC--------------------------------------TC---------------------CCGTTTACAATCCGGC...........................................................................................................................................................................................................................................................	26	4	0.75	3	0	0	2	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.TA--------------------------------------------------------------------ACTTC--------------------------------------TC---------------------CCGTTTACAATCCGGCGA.........................................................................................................................................................................................................................................................	27	4	0.75	3	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
ATA--------------------------------------------------------------------ACTTC--------------------------------------TC---------------------CCGTTTACAATCCGG............................................................................................................................................................................................................................................................	25	4	0.75	3	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................................................................................CGCATCTGAAGGAGCAGTATTCGGC.....................................................................................................................	25	20	0.65	13	2	0	4	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................................................................................CGCATCTGAAGGAGCAGTATTCGG......................................................................................................................	24	20	0.65	13	0	0	10	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................CTGTTGTAA--ATACTTCCTCCC..................................	21	14	0.57	8	0	0	8	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.TA--------------------------------------------------------------------ACTTC--------------------------------------TC---------------------CCGTTTACAATCCGGC...........................................................................................................................................................................................................................................................	25	4	0.50	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................................................................ATCTGAAGGAGCAGTATTCGG......................................................................................................................	21	20	0.50	10	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	2	2	1	0	0	0	0	0	1	1	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.TA--------------------------------------------------------------------ACTTC--------------------------------------TC---------------------CCGTTTACAATCCGGCG..........................................................................................................................................................................................................................................................	26	4	0.50	2	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................................................................................CGCATCTGAAGGAGCAGTATTCG.......................................................................................................................	23	20	0.45	9	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	5	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................................................TCTGAAGGAGCAGTATTCGGCATTC.................................................................................................................	25	18	0.44	8	0	0	0	0	4	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................................................TCTGAAGGAGCAGTATTCGGCATTCA................................................................................................................	26	18	0.39	7	0	0	0	0	4	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................TCTAGGAGAGTCTTATGGCCAGGCT.........................................................................................................................................................................................	25	20	0.35	7	0	0	0	0	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................TAGGAGAGTCTTATGGCCAGGCTCA.......................................................................................................................................................................................	25	20	0.35	7	0	0	0	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................CTGTTGTAA--ATACTTCCTCCCACATC.............................	26	13	0.31	4	0	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................TCTAGGAGAGTCTTATGGCCAGGCTCA.......................................................................................................................................................................................	27	20	0.30	6	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.TA--------------------------------------------------------------------ACTTC--------------------------------------TC---------------------CCGTTTACAATCCGGCGC.........................................................................................................................................................................................................................................................	27	4	0.25	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
ATA--------------------------------------------------------------------ACTTC--------------------------------------TC---------------------CCGTTTACAATCCGGCG..........................................................................................................................................................................................................................................................	27	4	0.25	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
ATA--------------------------------------------------------------------ACTTC--------------------------------------TC---------------------CCGTTTACAATCCGGCGA.........................................................................................................................................................................................................................................................	28	4	0.25	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................................................................ATCTGAAGGAGCAGTATTCGGCA....................................................................................................................	23	20	0.25	5	0	0	2	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................................................................................CGCATCTGAAGGAGCAGTATTCGGCA....................................................................................................................	26	20	0.25	5	1	0	2	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
ATA--------------------------------------------------------------------ACTTC--------------------------------------TC---------------------CCGTTTACAATCCG.............................................................................................................................................................................................................................................................	24	4	0.25	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
ATA--------------------------------------------------------------------ACTTC--------------------------------------TC---------------------CCGTTTACAATC...............................................................................................................................................................................................................................................................	22	4	0.25	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
ATA--------------------------------------------------------------------ACTTC--------------------------------------TC---------------------CCGTTTACAATCCGGCC..........................................................................................................................................................................................................................................................	27	4	0.25	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..A--------------------------------------------------------------------ACTTC--------------------------------------TC---------------------CCGTTTACAATCCGGCGAG........................................................................................................................................................................................................................................................	27	4	0.25	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................................................................................CGCATCTGAAGGAGCAGTATTC........................................................................................................................	22	20	0.25	5	0	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................CTGTTGTAA--ATACTTCCTCCCACAT..............................	25	13	0.23	3	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................................................................................AGTTTCTGGATCTAAATCACATGTC.................................................................................	25	14	0.21	3	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................................................TCTGAAGGAGCAGTATTCGGCATT..................................................................................................................	24	19	0.21	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................................................................................................TTTCTGGATCTAAATCACATGTCGCG..............................................................................	26	10	0.20	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................................................................................................TTTCTGGATCTAAATCACATGTCGC...............................................................................	25	10	0.20	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................................................................................CGCATCTGAAGGAGCAGTATT.........................................................................................................................	21	20	0.20	4	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................................................................................................................TCAAAGAGTTTCTGGATCTAAATC........................................................................................	24	20	0.20	4	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................................................TCTGAAGGAGCAGTATTCGGCATTCATC..............................................................................................................	28	16	0.19	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................................................TCTGAAGGAGCAGTATTCGGCATTCAT...............................................................................................................	27	16	0.19	3	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................................................................................CGCATCTGAAGGAGCAGTATTCGGCAT...................................................................................................................	27	17	0.18	3	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................................................................ATCTGAAGGAGCAGTATTCGGCAT...................................................................................................................	24	19	0.16	3	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................................................................ATCTGAAGGAGCAGTATTC........................................................................................................................	19	20	0.15	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................................................................................GGCATTCATCAAAGAGTTTCTGGATC..............................................................................................	26	20	0.15	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................................................................................AGTTTCTGGATCTAAATCACATG...................................................................................	23	14	0.14	2	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................................................................................................................................................TGTTGTAA--ATACTTCCTCCCA.................................	21	14	0.14	2	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................................................................................................TTTCTGGATCTAAATCACATGTC.................................................................................	23	14	0.14	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................................................................................AGTTTCTGGATCTAAATCACATGT..................................................................................	24	14	0.14	2	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................C--------------------------------------TC---------------------CCGTTTACAATCCGGCGAGTTG.....................................................................................................................................................................................................................................................	25	7	0.14	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................................TCTGGATCTAAATCACATGTCGCGAGT...........................................................................	27	8	0.13	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................................................................................................TTCTGGATCTAAATCACATGTCGCGAGT...........................................................................	28	8	0.13	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................................................................................................................TCAAAGAGTTTCTGGATCTAAATCACA.....................................................................................	27	18	0.11	2	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................................TCTGGATCTAAATCACATGTCGCGAG............................................................................	26	9	0.11	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................................................................ATCTGAAGGAGCAGTATTCGGCATTC.................................................................................................................	26	18	0.11	2	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................................................................ATCTGAAGGAGCAGTATTCGGCATT..................................................................................................................	25	19	0.11	2	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................................................................................................................TCAAAGAGTTTCTGGATCTAAATCA.......................................................................................	25	19	0.11	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................................................TCTGAAGGAGCAGTATTCGGCA....................................................................................................................	22	20	0.10	2	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................................TCTGGATCTAAATCACATGTCGCGA.............................................................................	25	10	0.10	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................................................................................GGCATTCATCAAAGAGTTTCTG..................................................................................................	22	20	0.10	2	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................................................................................CGCATCTGAAGGAGCAGTAT..........................................................................................................................	20	20	0.10	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................................................................CTGGATCTAAATCACATGTCGCGAGT...........................................................................	26	10	0.10	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................TCTAGGAGAGTCTTATGGCCAGGCTC........................................................................................................................................................................................	26	20	0.10	2	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................................................................................GCATTCATCAAAGAGTTTCTGGATCT.............................................................................................	26	20	0.10	2	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................................................................................AGTTTCTGGATCTAAATCACATGTCG................................................................................	26	11	0.09	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................................................................CTGGATCTAAATCACATGTCGC...............................................................................	22	12	0.08	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................................................................CTGGATCTAAATCACATGTCGCGA.............................................................................	24	12	0.08	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................CTGTTGTAA--ATACTTCCTCCCACAA..............................	25	13	0.08	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................................................................................................................................................TGTTGTAA--ATACTTCCTCCCAC................................	22	13	0.08	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................................TCTGGATCTAAATCACATGTC.................................................................................	21	14	0.07	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0
............................................................................................................................................................................................................................................................................................................................................................TGTTGTAA--ATACTTCCTCCC..................................	20	14	0.07	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................CTGTTGTAA--ATACTTCCT.....................................	18	16	0.06	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................................................................................................................TCAAAGAGTTTCTGGATCTAAATCACAT....................................................................................	28	16	0.06	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................................GCATCTGAAGGAGCAGTATTCGGCATT..................................................................................................................	27	17	0.06	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................GTTTCTGGATCTAAATCACAT....................................................................................	21	17	0.06	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................................................................ATCTGAAGGAGCAGTATTCGGCATTCA................................................................................................................	27	18	0.06	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................GTTTCTGGATCTAAATCACA.....................................................................................	20	19	0.05	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................................................................................................................TGTAA--ATACTTCCTCCCACAT..............................	21	19	0.05	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................................................................................................................TGTAA--ATACTTCCTCCCACA...............................	20	19	0.05	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................................AGGAGCAGTATTCGGCATTCATC..............................................................................................................	23	19	0.05	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................................................................................................TTTCTGGATCTAAATCACA.....................................................................................	19	19	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................................................................................................CAAAGAGTTTCTGGATCTAAATCACA.....................................................................................	26	19	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................................................................................CGCATCTGAAGGAGCAGTATC.........................................................................................................................	21	20	0.05	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................................................................CGAGTATTCAGTGCGGTTTG........................................................................................................................................................................................................................................	20	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................................................................................CGCATCTGAAGGAGCAGTATTCCC......................................................................................................................	24	20	0.05	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................................................................................CGCATCTGAAGGAGCAGTATTCGGCCC...................................................................................................................	27	20	0.05	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................................................................................TTCGCATCTGAAGGAGCAGTATTC........................................................................................................................	24	20	0.05	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................TCTAGGAGAGTCTTATGG................................................................................................................................................................................................	18	20	0.05	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................CTGAAGGAGCAGTATTCGG......................................................................................................................	19	20	0.05	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................TCTAGGAGAGTCTTATGGCCAGGCTCAT......................................................................................................................................................................................	28	20	0.05	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................................................TCTGAAGGAGCAGTATTCGG......................................................................................................................	20	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................................................................TCGCATCTGAAGGAGCAGTATTC........................................................................................................................	23	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................................GGAATTCGCATCTGAAGGAGCAG.............................................................................................................................	23	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................................................................................TTCGCATCTGAAGGAGCAGTATTCGGC.....................................................................................................................	27	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................................AGGCTCATCTTCGATTTC............................................................................................................................................................................	18	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................TCTAGGAGAGTCTTATGGCC..............................................................................................................................................................................................	20	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................................................................................GCATTCATCAAAGAGTTTCTGGATC..............................................................................................	25	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................................................................................GGCATTCATCAAAGAGTTTCTGGAT...............................................................................................	25	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................................................................................CGCATCTGAAGGAGCAGTA...........................................................................................................................	19	20	0.05	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................................................TCTGAAGGAGCAGTATTA........................................................................................................................	18	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................................................................AAGAGTTTCTGGATCTAAATC........................................................................................	21	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................................................TCTCGGTCTTGAGCGAAAATTGG.......................................................................................................................................................	23	20	0.05	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................................................................................GGCATTCATCAAAGAGTTTCTGGA................................................................................................	24	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................TCTAGGAGAGTCTTATGGCCA.............................................................................................................................................................................................	21	20	0.05	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................................................ATTCATCAAAGAGTTTCTGGAT...............................................................................................	22	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................................................................ATCTGAAGGAGCAGTATTCG.......................................................................................................................	20	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................................................TCTGAAGGAGCAGTATTCGGC.....................................................................................................................	21	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................ATGGCCAGGCTCATCTTCG.................................................................................................................................................................................	19	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................................................................................................................TCAAAGAGTTTCTGGATCTAAAA.........................................................................................	23	20	0.05	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................TAGGAGAGTCTTATGGCCAGGCC.........................................................................................................................................................................................	23	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................................................................................ATTCGCATCTGAAGGAGCAGT............................................................................................................................	21	20	0.05	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................................................................TCGCATCTGAAGGAGCAGTATT.........................................................................................................................	22	20	0.05	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................GAGAGTCTTATGGCCAGGCTCA.......................................................................................................................................................................................	22	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................................................TCGGAATTCGCATCTGAAGGAGCA..............................................................................................................................	24	20	0.05	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

droMoj3

ACCCTGAAATAGCTAGCTGATCGCCAAGGTAACAACAGAGGAGCTCCATTGTCAGCAGCATTTCATCACAACTCAT--------------------------------------CG---------------------TCGAATGTCTTCAGGCGAATATTTAGTCTGCTTGCCAAAAAAGCAAGGCGTCGAGTCTTTGGGCGACTCTTATTTGCAGGCCAAACGTCGGCTCTTAAATTTGGAGTGCAAGTTTGCTCGAAATCATGTTCTAAAGGAGAAATATTCTGCATTTATAAAAGAGTATATTGATCTCAAACATATGTC---------------------------------------------------------------------------------	Size	Hit Count	Total Norm	Total	M046 Female-body	V041 Embryo	V049 Head	V056 Head	M060 Embryo	V110 Male-body
....................................................................................................................................................................................................................................................................TCATGTTCTAAAGGAGAAATATTCTGC.....................................................................................................................	27	2	1.50	3	3	0	0	0	0	0
........................CAAGGTAACAACAGAGGAGCTCC.....................................................................................................................................................................................................................................................................................................................................................................	23	12	1.25	15	8	2	0	0	4	1
........................CAAGGTAACAACAGAGGAGCTCCA....................................................................................................................................................................................................................................................................................................................................................................	24	12	1.08	13	7	0	0	0	1	5
.........................AAGGTAACAACAGAGGAGCTCCA....................................................................................................................................................................................................................................................................................................................................................................	23	13	1.08	14	7	2	0	0	0	5
....................................................................................................................................................................................................................................................................TCATGTTCTAAAGGAGAAATATT.........................................................................................................................	23	2	1.00	2	1	0	0	0	1	0
....................................................................................................................................................................................................................................................................TCATGTTCTAAAGGAGAAATAT..........................................................................................................................	22	2	1.00	2	2	0	0	0	0	0
........................CAAGGTAACAACAGAGGAGCTC......................................................................................................................................................................................................................................................................................................................................................................	22	12	0.75	9	4	1	0	0	4	0
.........................AAGGTAACAACAGAGGAGCTCC.....................................................................................................................................................................................................................................................................................................................................................................	22	13	0.69	9	3	0	0	0	5	1
.........................AAGGTAACAACAGAGGAGCTCCATAA.................................................................................................................................................................................................................................................................................................................................................................	26	2	0.50	1	0	0	0	0	0	1
.........................AAGGTAACAACAGAGGAGCTCCATT..................................................................................................................................................................................................................................................................................................................................................................	25	2	0.50	1	0	0	0	0	0	1
.......................................................................................................................................................................................................GCGACTCTTATTTGCAGGCCAAAC.....................................................................................................................................................................................	24	2	0.50	1	0	0	0	0	1	0
....................................................................................................................................................................................................................................................................TCATGTTCTAAAGGAGAAATATTCTG......................................................................................................................	26	2	0.50	1	1	0	0	0	0	0
.................................................................TCACAACTCAT--------------------------------------CG---------------------TCGAATGTCTTC...............................................................................................................................................................................................................................................................	25	2	0.50	1	1	0	0	0	0	0
......................GCCAAGGTAACAACAGAGGAGCTC......................................................................................................................................................................................................................................................................................................................................................................	24	12	0.33	4	1	0	0	0	3	0
........................................................................................................................................................................................................CGACTCTTATTTGCAGGCCAAA......................................................................................................................................................................................	22	3	0.33	1	1	0	0	0	0	0
................................................................................................................................................................................................TCTTTGGGCGACTCTTATTTGCAGGC..........................................................................................................................................................................................	26	3	0.33	1	1	0	0	0	0	0
....................TCGCCAAGGTAACAACAGAGGAGCTC......................................................................................................................................................................................................................................................................................................................................................................	26	12	0.08	1	0	0	0	0	1	0
........................CAAGGTAACAACAGAGGAG.........................................................................................................................................................................................................................................................................................................................................................................	19	12	0.08	1	1	0	0	0	0	0
........................CAAGGTAACAACAGAGGAGCTCCAA...................................................................................................................................................................................................................................................................................................................................................................	25	12	0.08	1	1	0	0	0	0	0
......................GCCAAGGTAACAACAGAGGAGCTCC.....................................................................................................................................................................................................................................................................................................................................................................	25	12	0.08	1	1	0	0	0	0	0
......................GCCAAGGTAACAACAGAGGAGCTCCA....................................................................................................................................................................................................................................................................................................................................................................	26	12	0.08	1	1	0	0	0	0	0
.........................AAGGTAACAACAGAGGAGCTC......................................................................................................................................................................................................................................................................................................................................................................	21	13	0.08	1	1	0	0	0	0	0
.........................AAGGTAACAACAGAGGAGC........................................................................................................................................................................................................................................................................................................................................................................	19	13	0.08	1	0	0	0	0	1	0
............................GTAACAACAGAGGAGCTCCA....................................................................................................................................................................................................................................................................................................................................................................	20	13	0.08	1	0	0	0	0	0	1
..........................AGGTAACAACAGAGGAGCTCCA....................................................................................................................................................................................................................................................................................................................................................................	22	13	0.08	1	1	0	0	0	0	0
............................GTAACAACAGAGGAGCTCC.....................................................................................................................................................................................................................................................................................................................................................................	19	13	0.08	1	0	0	0	0	1	0
..........................AGGTAACAACAGAGGAGCTCC.....................................................................................................................................................................................................................................................................................................................................................................	21	13	0.08	1	1	0	0	0	0	0

droGri2

C---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGAGCGCAAGCTCGGTCGTCGCTCAAGCCTTAAGCAGCAATAATTTGCATTTATACAAGAGTATTTTAACCTAAAGCACATGTCGCTGGTCGATCCTCTGTATTTTGATCAATGCAA--ATATTTCCTTCCACATCACTGAGTCTTGAAG---GAGGACAGCACG	Size	Hit Count	Total Norm	Total	M041 Female-body	V109 Male-body
No Reads

-30.2	-29.9	-29.9	-29.8

dan_1623

scaffold_13250:3336280-3336430 +

Candidate

Unknown

Predicted structure

Flybase annnotation

Repeatable elements

Sense Strand Reads

Anti-sense strand reads

Re-alignment of all predicted orthologs

Re-alignment of all predicted orthologs with sRNA reads