ID:

dan_1603

 Coordinate:

scaffold_13250:125540-125690 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-15.3 -15.3 -15.1

Flybase annnotation

exon [dana_GLEANR_1151:14]; CDS [Dana\GF11453-cds]; intron [Dana\GF11453-in]

No Repeatable elements found

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
CTTTTTATGTACCTCTCGAATTTTTTGTTTCAACATTTTTAATTTGTTTCTTTTATTGTTTACTTTTCATATATAATTTCGTTGTTGTTGTGCTTAACAAAATTCAACGCTGCTTGTATCCCGCTCGCTAAACAAAAAAAAAAAATGTTGCATGCCCTTAAACACTGAAAAAAAACAAACAAATAAAATAAAAAATATCAGATGACTTGCTGAATGAGCGGGCCAAGAACAAACTGCTGCAGGAGGAGATG
**************************************************.....((((((..((((((.((((((...(((((...((((.....))))....)))))....))))))...((..((..((((...........))))))..))..........)))))).)))))).......................************************************************** 		Read size # Mismatch Hit Count Total Norm Total M058
embryo
 V105
male body		 M044
female body
 V055
head
.....................................................................................................................................................................................................GAAGATGACTTGCTGAATGAGC................................ 22 2 1 2.00 2 2 0 0 0
...........................................................................ATTTCGTTGTTGTTGTGCTTAAC......................................................................................................................................................... 23 0 1 1.00 1 1 0 0 0
...........................................................................................................................................................................................................GACTTGCTGAATGAGCGGGC............................ 20 0 1 1.00 1 0 1 0 0
.....................................................................................................................................................................................................GGAGATGACTTGCTGAATGAGCGGG............................. 25 2 1 1.00 1 1 0 0 0
........................................................................................................................................................................................................GATGACTTGCTGAATGAGCG............................... 20 0 1 1.00 1 0 1 0 0
...............................................................................................................................................................................................................TGCTGAATGAGCGGGCCAAGAACAAACT................ 28 0 1 1.00 1 1 0 0 0
...........................................................................................................................................................................AAAACAAACTCATAAAATAAAAAA........................................................ 24 2 1 1.00 1 1 0 0 0
........................................................................................................................................................................................................GATGACTTGCTGTATGAGCG............................... 20 1 1 1.00 1 0 1 0 0
...........................................................................................................................................................................................................................GGGCCAAGAACAAACTGCT............. 19 0 1 1.00 1 1 0 0 0
........................................................................................................................................................................................................GATGACTTGCTGAATGAGC................................ 19 0 1 1.00 1 0 1 0 0
.......................................................................................................................................................................................................AGATTACTTGCTGAATGAGC................................ 20 1 1 1.00 1 0 1 0 0
...........................................................................................................................................................................................................................GGGCCAAGAACAAACTGCTGC........... 21 0 1 1.00 1 0 0 1 0
................................................................................................................................................................................................................GCTGAATGAGCGGGCCAAGAAC..................... 22 0 1 1.00 1 0 0 1 0
.....................................................................................................................................................................................................GAAGATGACTTGCTGAATGAGCG............................... 23 2 1 1.00 1 0 1 0 0
......................................................................................................................................................................................................................................AAGCTGCTGCAGGAGGAAATG 21 2 2 0.50 1 1 0 0 0
.................................................................................................................................................................................................................CTGAATCAGCGGGGAAAGAA...................... 20 3 3 0.33 1 0 1 0 0
.................................................................................................................................................................................................................................AGAATAAATTGCTGCAGGAGT..... 21 3 4 0.25 1 0 0 1 0
...................................................................................................................................................................................................................GAATCAGCGGGGCAAGAA...................... 18 2 12 0.08 1 0 0 0 1
.........................................................................................................................................................................AAAAAACAAACCCATAAAAGAAAAA......................................................... 25 3 19 0.05 1 1 0 0 0
.....................................................................................................................................................................................................................ATTAGCGGGCTAAGAACAC................... 19 3 20 0.05 1 0 0 0 1
.....................................................................................................................................................................TGAAAAAAAACAAACAAAAAA................................................................. 21 1 20 0.05 1 1 0 0 0

Anti-sense strand reads

GAAAAATACATGGAGAGCTTAAAAAACAAAGTTGTAAAAATTAAACAAAGAAAATAACAAATGAAAAGTATATATTAAAGCAACAACAACACGAATTGTTTTAAGTTGCGACGAACATAGGGCGAGCGATTTGTTTTTTTTTTTTACAACGTACGGGAATTTGTGACTTTTTTTTGTTTGTTTATTTTATTTTTTATAGTCTACTGAACGACTTACTCGCCCGGTTCTTGTTTGACGACGTCCTCCTCTAC
**************************************************.....((((((..((((((.((((((...(((((...((((.....))))....)))))....))))))...((..((..((((...........))))))..))..........)))))).)))))).......................************************************************** 		Read size # Mismatch Hit Count Total Norm Total M058
embryo
 V105
male body		 V055
head
..............................................................................AGCAACAACAACACGTAT........................................................................................................................................................... 18 1 2 0.50 1 1 0 0
.......................AAACAAAGTTGGAGAAATGAAACAA........................................................................................................................................................................................................... 25 3 3 0.33 1 0 1 0
.....................................................................................TCAACACGAATGGTTTTAA................................................................................................................................................... 19 2 6 0.17 1 0 0 1
.......................................................................................................AGTTGCGACGCACAGATGG................................................................................................................................. 19 3 13 0.08 1 0 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droAna3 scaffold_13250:125490-125740 - dan_1603 CTTT-TT-ATGTACC-----TCTCG----A-ATTT-------------------------------------------T-----TTGTT------TCAACAT------T-------------------TTTAATTTGTT--------TCTTTT-ATTGTTTA-CTTTTCATATATAATTTCGTTGT---------TGTTGTGCTTAACAAA---------A---------TTCAA----CG----CTGC---TTGTATCCCGCTCGCTAA--ACA-----------------------------------------------------------------------------AAAAAAAAAAATGTTGCATGCCCT-----------------------------------------------------------------------------------------------TAAA--------------------------CACTGA----AAAA------------------------AAAC-----AAACAAATAA-AA-----------------TA---------------A--AAAA---TATCAGATGACTTGCTGAATGAGCGGGCCAAGAACAAACTGCTGCAGGAGGAGATG
droBip1 scf7180000396413:679673-679906 - CTT--TT-ATGTACC-----T--CG----ATATTT-------------------------------------------T-----TTGTT------TCAACAT------T-------------------TTTAATTTGTT--------TCTTTT-ATTGTTTA-CTTTTCATATATAATTTTGTTGT---------TGTTGTGCTTAACAA-----------------------------CG----CTGC---TTGTATCCTGCTCGCTAAAAACA------------------------------------------------------------------------------------AAAATGTTGCATGCCC-------------------------------------------------------------------------------------CGCCTT-----TAA-TA------------------------CACTGA----AAAA------------------------A--------------------------AATAAAAA-------------------CAA--AT-----AAATAGATGACTTGCTGAATGAGCGGGCCAAGAACAAACTGCTGCAGGAGGAAATG
droKik1 scf7180000302706:491516-491763 + ATCC-TT-ATGTACC-----T--CG----A--TTTT------------TT-----G----A---TT-----------AC-----CTGT----------------------------------------TTTAATTTGAT--------TTTCTTTATTGTTTA-CTTTTCATATATTATTTTGTTGT---------CGTTGTGCTTAACAAA---------A------TACTACAACTTGCGCTCGCTGCTATTT-----------GCTAA--ACA-------------------------------------------------------------------------------------ATTTGTTGCATGCCC-------------------------------------------------------------------------------------CGCCCT-----GCCC--------------------------CACAAA----AAAA------------------------A--------AAACACCTAA-AA-----------------AA-------------CA----AAATGCAATCAGATGACCTGCTGAACGAGCGGGGCAAGAACAAGCTGCTGCAGGAGGAAATG
droFic1 scf7180000452523:470623-470881 + TT---TT-ATGTACC-----T--CG----A--TTTT-----------ATT-----T----A---TT-----------ACCT-----TTT---AATGCAACGT------T-------------------TTTAATTTGAC--------ATTTTT-ATTGTTTA-CTTTTCATATTTAATTTTGTTGTTGTTG---TTATTGTGCTTAACAAA---------A---------TACAACTTGCG----CTGC---TT-----------GCTAA--ACC-------------------------------------------------------------------------------------AATTGTTGCATGCCC-----------------------------------------------------------------------------------------CT-----GC-C--------------------------CACCGC----CAAC-C----------AACAAAA-----------------CA--TAAAAACCAAAAATGACTGA------------------------AAA---CCATAGATGACCTGCTCAACGTGCGGGGCAAGAACAAACTGCTGCAGGAGGAAATG
droEle1 scf7180000491278:1740587-1740844 - AT---TG-ATGTACC-----T--CG----A-ATTTT--------G---TT-----T----A---TT-----------ATCTTATCTGTT---TATGCCATA------TT-T-----------------TTTAATTTGAT--------TTTCTT-ATTGTTTA-CTTTTCATATATAATTTTGTTGTTATTGTTGTTATTGTGCTTAACAAA---------A---------TACAACTTGCG----CTGC---TT-----------GCTAA--ACC-------------------------------------------------------------------------------------ATTTGTTGCATGCCCTG-------------------------------------------------------------------------------------CCCT-----GCCC--------------------------CACCGA----AAAA--------------C--------------------------------AAAAAATGACCAA------------------------AAA---TCCCAGATGACCTGCTCAACGTGCGGGGCAAGAACAAACTGTTGCAGGAGGAAATG
droRho1 scf7180000767960:18218-18473 + AT---TT-ATGTACC-----T--CG----T-----------------ATT-----T----ATTATT-----------AT-----CTGTT---TATGCAACA------TT-T-----------------TTTAATTTGAT--------TTTCTT-ATTGTTTA-CTTTTCATATATAATTTTGTTGTTGTTG---TTATTGTGCTTAACAAA---------A---------TACAACTTGCG----CTGC---TT-----------GCTAA--ACC-------------------------------------------------------------------------------------AATTGTTGCATGCCCTG-------------------------------------------------------------------------------------CCCT-----GCCC--------------------------CACCGA----AA---TGA------------AAA-A---A-------------------AACAAAAACTGACCTA------------------------AAA---TGCCAGATGACCTGCTCAACGTGCGGGGCAAGAACAAACTGCTGCAGGAGGAAATG
droBia1 scf7180000302402:4109354-4109612 + CT---TT-ATGTACG-----ACCTACCTCA--TTTT--------A--ATT-----T----A---TT-----------AT-----CTGTT---AATGCCATA------TT-T-----------------TATAATTTTAC--------TTTCTT-ATTGTTTA-CTTTTCATA--TAATTTTGTTGTTGTTG---TTATTGTGCTTAACAAA---------A---------TACAACTTGCG----CTGC---TT-----------GCTAA--ACC-------------------------------------------------------------------------------------ACTTGTTGCATGACCTG-------------------------------------------------------------------------------------CCCT-----GCCC--------------------------CA---------AAA-TGA-----------------------CAA--------------------------------ACCGAAACCGAA---ACAA--ACC--GATCGCAGATGACCTCCTCAACGTGCGGGGCAAGAACAAACTGCTGCAGGAGGAAATG
droTak1 scf7180000415310:808601-808856 - CT---TT-ATGTACC-----T--CG----A--TTTTA----------ATTTCA-------T---TT-----------AT-----CTGTT---TATGCAATA------TT-T-----------------TATAATTTGAT--------TTTCTT-ATTGTTTA-CTTTTCATATATAATTTTGTTGTTGTTG---TTATTGTGCTTAACAAA---------A---------TACAACTTGCG----CTGC---TT-----------GCTAA--ACC-------------------------------------------------------------------------------------AATTGTTGCATGACCTGCCCCG--------------------------------------------------------------------------------CCCT-----GCCC---------------------------TC--C----AAAA-TGA-----------------------CAATCAA----------AA------------------C--------------GA--AAAA---TCCCAGATGACCTGCTCAACGTGCGGGGCAAGAACAAACTGCTGCAGGAGGAAATG
droEug1 scf7180000409444:100272-100547 - CT---AT-ATGTACC-----T--CG----A--TTTT---------T-ATTTTATTTA-TGATTATT-----------AT-----CTATT-ATAATGCAAGAT------TTT-----------------TATAATTTGAT--------TTTCTT-ATTGTTTA-CTTTTCATATATAATTTTGTTGTTGTTG---TTATTGTGCTTAACAAA---------A---------TACAACCTGCG----CTGC---TT-----------GCTAAAAACC-------------------------------------------------------------------------------------AATTGTTGCATGAAATGCCCCG--------------------------------------------------------------------------------CTCT-----GCCCTG------------------------CCCTGC----CA-------------------------------CACCA----------AA-----------CAAAAATCA--------TTGAT-------A---TCCCAGATGACCTGCTCAACGTGCGGGGCAAGAACAAACTGCTGCAGGAGGAAATG
dm3 chr3R:11129146-11129412 + CTTT-TT-ATGTACC-----T--CG----A--TTTT--------GT-ATT-----T----A---TT-----------ATCA-----TTT---AATGCAACAT----ATT-T-----------------TATAATTTGAT--------TTTCTAATTTGTTTA-CTTTTCATATATAATTTCGTTGTTATTG---TTATTGTGCTTAACAAA---------A---------TACAACTTGCG----CTGC---TT-----------GCTAA--ACC-------------------------------------------------------------------------------------ACTTGTTGCATGACCTGACCCG--------------------------------------------------------------------------------CCCT-----GCCC--------------------------CATCGC----AAAA------------AAA---------A-----------------------AAAACTGACCAAATATC-----------------------GAAACCAGATGACCTGCTCAACGTGCGGGGCAAGAACAAACTGCTGCAGGAGGAAATG
droSim2 3r:10099634-10099894 - CTTT-TT-ATGTACC-----T--CG----A--TTTT--------GT-ATT-----T----A---TT-----------ATCA-----TTT---AATGCAACAT----ATT-T-----------------TATAATTTGAT--------TTTCTAATTTGTTTA-CTTTTCATATATAATTTCGTTGTTATTG---TTATTGTGCTTAACAAA---------A---------TACAACTTGCG----CTGC---TT-----------GCTAA--ACC-------------------------------------------------------------------------------------ACTTGTTGCATGACCTGACCCG--------------------------------------------------------------------------------CCCT-----GCCC--------------------------CACCGC----AAAA------------------------A--------------------------ACTGACCAAATATC-----------------------GAAACCAGATGACCTGCTCAACGTGCGGGGCAAGAACAAGCTGCTGCAGGAGGAAATG
droSec2 scaffold_0:10822567-10822827 - CTTT-TT-ATGTACC-----T--CG----A--TTTT--------GTTATT-----T----A---TT-----------ATCA-----TTT---AATGCAACAT----ATT-T-----------------TATAATTTGAT--------TTTCTAATTTGTTTA-CTTTTCATATATAATTTCGTTGTTATTG---TTATTGTGCTTAACAAA---------A---------TACAACTTGCG----CTGC---TT-----------GCTAA--ACC-------------------------------------------------------------------------------------A-CTGTTGCATGACCTGACCCG--------------------------------------------------------------------------------CCCT-----GCCC--------------------------CACCGC----AAAA------------------------A--------------------------ACTGACCAAATATC-----------------------GAAACCAGATGACCTGCTCAACGTGCGGGGCAAGAACAAACTGCTGCAGGAGGAAATG
droYak3 3R:15303726-15304004 - CTAT-TG-ATGTACC-----T--CG----A--TTTT--------GT-ATT-----T----A---TT-----------ATTA--TTTATT-TTAATGCAACA------TT-T-----------------TATAATTTGAT--------TTTCCATTTTGTTTA-CTTTTCATATATAATTTTGTTGTTATTG---TTATTGTGCTTAACAAA---------A---------TACAACTTGCG----CTGC---TT-----------GCTAAA-ACC-------------------------------------------------------------------------------------AATTGTTGCATGACCTGCCCCGTCCGCC--------------------CCAA-----------------------------------------------------T-----GCCC--------------------------CAACGC----AAAA----------------A-------A--------------------------ACTGACCAAAAATCG-----------AA-A--TC---GAAACCAGATGACCTGCTCAACGTGCGGGGCAAGAACAAACTGCTGCAGGAGGAAATG
droEre2 scaffold_4770:10652899-10653166 + CTTT-TT-ATGTACC-----T--CG----A--TTTT--------GT-AAT-----T----A---TT-----------ATTT-----TTTTATAATGCAACA------CT-T-----------------TATAATTTGAT--------TTTCCAATTTGTTTA-CTTTTCATATATAATTTTGTTGTTATTG---TTATTGTGCTTAACAAA---------A---------TACAACTTGCG----CTGC---TT-----------GCTAA--ACC-------------------------------------------------------------------------------------ACTTGTTGCATGACCTGCCCCG--------------------------------------------------------------------------------CCCC-----GCCCTG-----------C-----CACG----ACTGC----AAAA------------------------A--------------------------ACTGACCAAAAATC-----------------------GAATCCAGATGACCTGCTCAACGTGCGGGGCAAGAACAAACTGCTGCAGGAGGAAATG
dp5 2:28056949-28057244 + AGTT-TTAGTGTATCACACCT--TGAG--A--TATTA----------CTTTCCTT---TTA---TT-----------TG-----CTGTT---TATCCAAAAA---------ACATTCCTTAATTTATT-------------------TGTATTTTTTATTTA-TTTTTCATATATTATT-TGTTGTTAAT------GTTGTGCTTAACAAA---------A-----ACAATACAACTTGCG----CTGC---TT-----------G---------------------------------TACCCTCGCTCGCTCGCTCGATCG--------------------------------CTAAATTTTGTTGTAAAACCTGCC------------------------------------------------------------------------TGCATGCACCGTC----------C--------------------------AATCCC----CAAC------------AACAAAA-----------------------------------------------------------CAA--AC---G--AACAGATGACTTGCTGAATGAGCGCGGAAAGAACAAACTGCTGCAGGAGGAAATG
droPer2 scaffold_6:3383678-3383973 + AGTT-TTAGTGTACCACACCT--TGAG--A--TATTA----------CTTTCCTT---TTA---TT-----------TG-----CTGTT---TATCCAAAAA---------ACATTCCTTAATTTATT-------------------TGTATTTTTTATTTA-TTTTTCATATATTATT-TGTTGTTAAT------GTTGTGCTTAACAAA---------A-----ACAATACAACTTGCG----CTGC---TT-----------G---------------------------------TACCCTCGCTCGCTCGCTCGATCG--------------------------------CTAAATTTTGTTGTAAAACCTGCC------------------------------------------------------------------------TGCATGCACCGTC----------C--------------------------AATCCC----CAAC------------AACAAAA-----------------------------------------------------------CAA--AC---G--AACAGATGACTTGCTGAATGAGCGCGGAAAGAACAAACTGCTGCAGGAGGAAATG
droWil2 scf2_1100000004943:3668026-3668375 + CTT---G-ATT---CCCACTT--TG----A--TGTACATATA-AGTAATT-----T----A---CT-----------ATGT-----TTT---T-------A-------T-T-----------------TTTCATTTGATTTATTGTTTAACCATTTTATTTATTTTTTCATATCTCAATAATTT------G---TTGTTGTGCTTAACCCACCGAACGCCAAAAAA----AAAAA----------------------------------AA-AAAAACGCCAACCTG------------C----TCGCTCGCCCGCTCGCTCGTCCCCCTTGCCCTAATTGTTTATTAAATAAAACAAAATTATGTTGCATGCCG---------------------------------------------------------------------------------------CC----------GAT-----------C-----TATGCCTC----C----AAAAATTACACCCCCAAACA------CAC--------ACA--------CACACACACTG----------------------AAATTTACAC---CATCAGATGACTTGCTGAATGAGCGGGGCAAGAATAAACTGCTGCAGGAGGAAATG
droVir3 scaffold_13047:7831761-7832109 - GTTCCTT-ATGTTAG-----TCCAG----A--TTTAAATTGAT--C-ATT-------TTT------------------------ATTTC---TATAC----CA-------------------------ATTAATATA----------TATTTT-TGTGTTTA-TTTTTCATA--TGATTTTGTT-----CG---TTGTTGTTCTTAACCGA---------AAAAAA---AAAAAAC---------------------------------AA-ACAAATTACAACTTATGTGCCGCT-TGTACGCTC------------------------------------------------------------------------CCCGCCCGCCTCACCGCCTGCGAACC---GCCAACGCCCTAATGTTTATTGTT--TA---TTTTT------TATGCATGCCTCGTGTTGCTGTT-----------------TTTGTTATT----GTTTTAACAAAAA--------------CAAAAAAAAAA--------AAACAATTTT-A-------ATA----------------------AA-A--AAAA---AAACAGACGACTTGTTGAACGAACGAGCCAAGAACAAACTGCTGCAGGAGGAAATG
droMoj3 scaffold_6540:15553158-15553470 - ATTT-TT-ATTT------------G----T-ATTTAA-TTTTT--T-ATT-------TTT------------------------ATATT---TATGC----CT-------------------------ATTAATATAAC--------TATTTT-AATGTTTA-TTTTTCATA--TGATTTTGTT-----CG---TTGTTGTGCTTAACCGA---------AAAAAA----AACAA----------------------------------AA-ACCAATTTCAACTTGTGTGCCGCT-TGTACGCTCCC-CGCCTGCT----------------------------------------------------------------------------------GAACCAACGCCAACGCCCTAATGTTTATTGTT---A---TTTAA------AATGCATGCCACGTATCGCTGTGCTCTTTTTTGTTCCTACTTTGTTATT----GTTGA----AAC--------------------------------------------------------------------------------A----------AAAAAGACGACTTGTTGAACGAACGCGCCAAGAACAAACTGCTGCAGGAGGAGATG
droGri2 scaffold_14906:892464-892774 + GAC--TT-ATATTAC---------------------------------TTT-------TTA---TTTTTTCTTTATTACC----------------C----CTATTAAT-A-----------------TA---TATATT--------TTTTTTGTATGTTTA-TTTTTCATA--TGATTTTGTT-----CG---TTGTTGTGCCTAACCT----------T---------TACAACTTGTG------------------------------------------------TGCTGCTTTGTACGCTCCC-CGCCTGC-----------------------------------------------------------------------------------GATCC---GCCAACGCCCTAATGTTGATTGTTATTATTATTTAAAACGCTGCTGCATGCCACGTGTTGCCGTTATATATATT--------TTTGTAATT----GCTTA----AAAA------------------------A-----------------------AACAATGATA----------------------A--ACA---CACGCAGACGACTTGGTGAACGAACGCGCTAAGAACAAACTGCTGCAGGAGGAGATG

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droAna3
CTTT-TT-ATGTACC-----TCTCG----A-ATTT-------------------------------------------T-----TTGTT------TCAACAT------T-------------------TTTAATTTGTT--------TCTTTT-ATTGTTTA-CTTTTCATATATAATTTCGTTGT---------TGTTGTGCTTAACAAA---------A---------TTCAA----CG----CTGC---TTGTATCCCGCTCGCTAA--ACA-----------------------------------------------------------------------------AAAAAAAAAAATGTTGCATGCCCT-----------------------------------------------------------------------------------------------TAAA--------------------------CACTGA----AAAA------------------------AAAC-----AAACAAATAA-AA-----------------TA---------------A--AAAA---TATCAGATGACTTGCTGAATGAGCGGGCCAAGAACAAACTGCTGCAGGAGGAGATGSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
................................................................................................................................................................................ATTTCGTTGT---------TGTTGTGCTTAAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001010000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACTTGCTGAATGAGCGGGC............................2011.001000010
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGACTTGCTGAATGAGCG...............................2011.001000010
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCTGAATGAGCGGGCCAAGAACAAACT................2811.001010000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGCCAAGAACAAACTGCT.............1911.001010000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGACTTGCTGAATGAGC................................1911.001000010
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGCCAAGAACAAACTGCTGC...........2111.001100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGAATGAGCGGGCCAAGAAC.....................2211.001100000
droBip1
CTT--TT-ATGTACC-----T--CG----ATATTT-------------------------------------------T-----TTGTT------TCAACAT------T-------------------TTTAATTTGTT--------TCTTTT-ATTGTTTA-CTTTTCATATATAATTTTGTTGT---------TGTTGTGCTTAACAA-----------------------------CG----CTGC---TTGTATCCTGCTCGCTAAAAACA------------------------------------------------------------------------------------AAAATGTTGCATGCCC-------------------------------------------------------------------------------------CGCCTT-----TAA-TA------------------------CACTGA----AAAA------------------------A--------------------------AATAAAAA-------------------CAA--AT-----AAATAGATGACTTGCTGAATGAGCGGGCCAAGAACAAACTGCTGCAGGAGGAAATGSizeHit CountTotal NormTotal
No Reads
droKik1
ATCC-TT-ATGTACC-----T--CG----A--TTTT------------TT-----G----A---TT-----------AC-----CTGT----------------------------------------TTTAATTTGAT--------TTTCTTTATTGTTTA-CTTTTCATATATTATTTTGTTGT---------CGTTGTGCTTAACAAA---------A------TACTACAACTTGCGCTCGCTGCTATTT-----------GCTAA--ACA-------------------------------------------------------------------------------------ATTTGTTGCATGCCC-------------------------------------------------------------------------------------CGCCCT-----GCCC--------------------------CACAAA----AAAA------------------------A--------AAACACCTAA-AA-----------------AA-------------CA----AAATGCAATCAGATGACCTGCTGAACGAGCGGGGCAAGAACAAGCTGCTGCAGGAGGAAATGSizeHit CountTotal NormTotal
No Reads
droFic1
TT---TT-ATGTACC-----T--CG----A--TTTT-----------ATT-----T----A---TT-----------ACCT-----TTT---AATGCAACGT------T-------------------TTTAATTTGAC--------ATTTTT-ATTGTTTA-CTTTTCATATTTAATTTTGTTGTTGTTG---TTATTGTGCTTAACAAA---------A---------TACAACTTGCG----CTGC---TT-----------GCTAA--ACC-------------------------------------------------------------------------------------AATTGTTGCATGCCC-----------------------------------------------------------------------------------------CT-----GC-C--------------------------CACCGC----CAAC-C----------AACAAAA-----------------CA--TAAAAACCAAAAATGACTGA------------------------AAA---CCATAGATGACCTGCTCAACGTGCGGGGCAAGAACAAACTGCTGCAGGAGGAAATGSizeHit CountTotal NormTotal
No Reads
droEle1
AT---TG-ATGTACC-----T--CG----A-ATTTT--------G---TT-----T----A---TT-----------ATCTTATCTGTT---TATGCCATA------TT-T-----------------TTTAATTTGAT--------TTTCTT-ATTGTTTA-CTTTTCATATATAATTTTGTTGTTATTGTTGTTATTGTGCTTAACAAA---------A---------TACAACTTGCG----CTGC---TT-----------GCTAA--ACC-------------------------------------------------------------------------------------ATTTGTTGCATGCCCTG-------------------------------------------------------------------------------------CCCT-----GCCC--------------------------CACCGA----AAAA--------------C--------------------------------AAAAAATGACCAA------------------------AAA---TCCCAGATGACCTGCTCAACGTGCGGGGCAAGAACAAACTGTTGCAGGAGGAAATGSizeHit CountTotal NormTotal
No Reads
droRho1
AT---TT-ATGTACC-----T--CG----T-----------------ATT-----T----ATTATT-----------AT-----CTGTT---TATGCAACA------TT-T-----------------TTTAATTTGAT--------TTTCTT-ATTGTTTA-CTTTTCATATATAATTTTGTTGTTGTTG---TTATTGTGCTTAACAAA---------A---------TACAACTTGCG----CTGC---TT-----------GCTAA--ACC-------------------------------------------------------------------------------------AATTGTTGCATGCCCTG-------------------------------------------------------------------------------------CCCT-----GCCC--------------------------CACCGA----AA---TGA------------AAA-A---A-------------------AACAAAAACTGACCTA------------------------AAA---TGCCAGATGACCTGCTCAACGTGCGGGGCAAGAACAAACTGCTGCAGGAGGAAATGSizeHit CountTotal NormTotal
No Reads
droBia1
CT---TT-ATGTACG-----ACCTACCTCA--TTTT--------A--ATT-----T----A---TT-----------AT-----CTGTT---AATGCCATA------TT-T-----------------TATAATTTTAC--------TTTCTT-ATTGTTTA-CTTTTCATA--TAATTTTGTTGTTGTTG---TTATTGTGCTTAACAAA---------A---------TACAACTTGCG----CTGC---TT-----------GCTAA--ACC-------------------------------------------------------------------------------------ACTTGTTGCATGACCTG-------------------------------------------------------------------------------------CCCT-----GCCC--------------------------CA---------AAA-TGA-----------------------CAA--------------------------------ACCGAAACCGAA---ACAA--ACC--GATCGCAGATGACCTCCTCAACGTGCGGGGCAAGAACAAACTGCTGCAGGAGGAAATGSizeHit CountTotal NormTotal
No Reads
droTak1
CT---TT-ATGTACC-----T--CG----A--TTTTA----------ATTTCA-------T---TT-----------AT-----CTGTT---TATGCAATA------TT-T-----------------TATAATTTGAT--------TTTCTT-ATTGTTTA-CTTTTCATATATAATTTTGTTGTTGTTG---TTATTGTGCTTAACAAA---------A---------TACAACTTGCG----CTGC---TT-----------GCTAA--ACC-------------------------------------------------------------------------------------AATTGTTGCATGACCTGCCCCG--------------------------------------------------------------------------------CCCT-----GCCC---------------------------TC--C----AAAA-TGA-----------------------CAATCAA----------AA------------------C--------------GA--AAAA---TCCCAGATGACCTGCTCAACGTGCGGGGCAAGAACAAACTGCTGCAGGAGGAAATGSizeHit CountTotal NormTotal
No Reads
droEug1
CT---AT-ATGTACC-----T--CG----A--TTTT---------T-ATTTTATTTA-TGATTATT-----------AT-----CTATT-ATAATGCAAGAT------TTT-----------------TATAATTTGAT--------TTTCTT-ATTGTTTA-CTTTTCATATATAATTTTGTTGTTGTTG---TTATTGTGCTTAACAAA---------A---------TACAACCTGCG----CTGC---TT-----------GCTAAAAACC-------------------------------------------------------------------------------------AATTGTTGCATGAAATGCCCCG--------------------------------------------------------------------------------CTCT-----GCCCTG------------------------CCCTGC----CA-------------------------------CACCA----------AA-----------CAAAAATCA--------TTGAT-------A---TCCCAGATGACCTGCTCAACGTGCGGGGCAAGAACAAACTGCTGCAGGAGGAAATGSizeHit CountTotal NormTotal
No Reads
dm3
CTTT-TT-ATGTACC-----T--CG----A--TTTT--------GT-ATT-----T----A---TT-----------ATCA-----TTT---AATGCAACAT----ATT-T-----------------TATAATTTGAT--------TTTCTAATTTGTTTA-CTTTTCATATATAATTTCGTTGTTATTG---TTATTGTGCTTAACAAA---------A---------TACAACTTGCG----CTGC---TT-----------GCTAA--ACC-------------------------------------------------------------------------------------ACTTGTTGCATGACCTGACCCG--------------------------------------------------------------------------------CCCT-----GCCC--------------------------CATCGC----AAAA------------AAA---------A-----------------------AAAACTGACCAAATATC-----------------------GAAACCAGATGACCTGCTCAACGTGCGGGGCAAGAACAAACTGCTGCAGGAGGAAATGSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAACGTGCGGGGCAAGAACAAACTGCT.............2816.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGTGCGGGGCAAGAACAAACTGCTGC...........2815.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTGCGGGGCAAGAACAAACTGCTGCAA.........2814.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGTGCGGGGCAAGAAC.....................1813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCAAGAACAAACTGCTGCAGGAGG.....2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAACGTGCGGGGCAAGAACAAACTGC..............2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGTGCGGGGCAAGAACAAACTGCT.............2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACGTGCGGGGCAAGAACAAACTGC..............2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGACCTGCTCAACGTGCGG..............................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000010000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGTGCGGGGCAAGAACAAACTGC..............2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGACCTGCTCAACGTGCGG..............................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCTCAACGTGCGGGGCAAGAACAAAC.................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCAACGTGCGGGGCAAGAACAAACT................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGGCAAGAACAAACTGCTGC...........2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAACTGCTGCAGGAGGAAAT.2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGCTCAACGTGCGGGGCAAGAACAAACT................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCTGCTCAACGTGCGGGGCA..........................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAACTGCTGCAGGAGGAAA..1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCGGGGCAAGAACAAACTGCT.............2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGACCTGCTCAACGTGCG...............................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACCTGCTCAACGTGCGGGGCAAGAAC.....................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................TAATTTCGTTGTTATTG---TTATTGTGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
...........................................................................................................................................................................................................................................................................TAA--ACC-------------------------------------------------------------------------------------ACTTGTTGCATGAC...............................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAACAAACTGCTGCAGGAGGA....2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAAGAACAAACTGCTGCAGG........2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................TACAACTTGCG----CTGC---TT-----------GCTAA--ACC-------------------------------------------------------------------------------------ACT..........................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCGGGGCAAGAACAAACTGCTGCA..........2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGACCTGCTCAACGTGCGGGGC...........................2311.0010000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGGCAAGAACAAACTGCTGCAGG........2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGACCTGCTCAACGTGCGGGGCCG.........................2611.0010000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTGCTGCAGGAGGAAAT.1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAACAAACTGCTGCAGGAGG.....2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAGAACAAACTGCTGCAGGAGGAAAT.2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGGGCAAGAACAAACTGCTGCAGGA.......2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCGGGGCAAGAACAAACTGCTGCAGG........2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGACCTGCTCAACGTGCGGGGCAA.........................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGACCTGCTCAACGTGCGGGGCAAGAA......................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACGTGCGGGGCAAGAACA....................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACGTGCGGGGCAAGAACAAA..................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGAACAAACTGCTGCAGGA.......2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGACCTGCTCAACGTGCGGGG............................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGGGGCAAGAACAAACTGCTGCAG.........2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGTGCGGGGCAAGAACAAAC.................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGCTCAACGTGCGGGGCAAGAACA....................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................TTGTGCTTAACAAA---------A---------TACAACTTGCG----C...............................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCAACGTGCGGGGCAAGAACAAAC.................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTGCTCAACGTGCGGGGCAAGAACAAA..................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCTGCTCAACGTGCGGGGCAAGAACA....................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGCTCAACGTGCGGGGCAAGAAC.....................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACTGCTGCAGGAGGAAA..1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAACAAACTGCTGCAGGA.......1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAATATC-----------------------GAAACCAGATGACCTGCTC.......................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGGCAAGAACAAACTGC..............1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAAGAACAAACTGCTGCAGGAG......2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGCTCAACGTGCGGGGC...........................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................TTATTGTGCTTAACAAA---------A---------TCG............................................................................................................................................................................................................................................................................................................................................................................................................................................2130.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
droSim2
CTTT-TT-ATGTACC-----T--CG----A--TTTT--------GT-ATT-----T----A---TT-----------ATCA-----TTT---AATGCAACAT----ATT-T-----------------TATAATTTGAT--------TTTCTAATTTGTTTA-CTTTTCATATATAATTTCGTTGTTATTG---TTATTGTGCTTAACAAA---------A---------TACAACTTGCG----CTGC---TT-----------GCTAA--ACC-------------------------------------------------------------------------------------ACTTGTTGCATGACCTGACCCG--------------------------------------------------------------------------------CCCT-----GCCC--------------------------CACCGC----AAAA------------------------A--------------------------ACTGACCAAATATC-----------------------GAAACCAGATGACCTGCTCAACGTGCGGGGCAAGAACAAGCTGCTGCAGGAGGAAATGSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGCTCAACGTGCGGGGC...........................1813.00300300000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACCAAATATC-----------------------GAAACCAGATGAC.............................................2411.00110000000000000000
..................................................................................................................................TAATTTGAT--------TTTCTAATT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100001000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAACAAGCTGCTGCA..........1611.00100000000001000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGTGCGGGGCAAGAACAAGCTGC..............2511.00100000000001000000
droSec2
CTTT-TT-ATGTACC-----T--CG----A--TTTT--------GTTATT-----T----A---TT-----------ATCA-----TTT---AATGCAACAT----ATT-T-----------------TATAATTTGAT--------TTTCTAATTTGTTTA-CTTTTCATATATAATTTCGTTGTTATTG---TTATTGTGCTTAACAAA---------A---------TACAACTTGCG----CTGC---TT-----------GCTAA--ACC-------------------------------------------------------------------------------------A-CTGTTGCATGACCTGACCCG--------------------------------------------------------------------------------CCCT-----GCCC--------------------------CACCGC----AAAA------------------------A--------------------------ACTGACCAAATATC-----------------------GAAACCAGATGACCTGCTCAACGTGCGGGGCAAGAACAAACTGCTGCAGGAGGAAATGSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGATGACCTGCTCAACGTGCGGGGCA..........................2611.0010010
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACGTGCGGGGCAAGAACA....................2011.0010010
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGACCTGCTCAACGTGCGG..............................2011.0010010
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGATGACCTGCTCAACGTGCGGG.............................2311.0010001
droYak3
CTAT-TG-ATGTACC-----T--CG----A--TTTT--------GT-ATT-----T----A---TT-----------ATTA--TTTATT-TTAATGCAACA------TT-T-----------------TATAATTTGAT--------TTTCCATTTTGTTTA-CTTTTCATATATAATTTTGTTGTTATTG---TTATTGTGCTTAACAAA---------A---------TACAACTTGCG----CTGC---TT-----------GCTAAA-ACC-------------------------------------------------------------------------------------AATTGTTGCATGACCTGCCCCGTCCGCC--------------------CCAA-----------------------------------------------------T-----GCCC--------------------------CAACGC----AAAA----------------A-------A--------------------------ACTGACCAAAAATCG-----------AA-A--TC---GAAACCAGATGACCTGCTCAACGTGCGGGGCAAGAACAAACTGCTGCAGGAGGAAATGSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACGTGCGGGGCAAGAACAAACTGCTG............2811.00100000010000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGACCTGCTCAACGTGCGG..............................2111.00100000010000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCAACGTGCGGGGCAAGAACAAAC.................2611.00100100000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGGCAAGAACAAACTGCT.............1911.00101000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAATCG-----------AA-A--TC---GAAACCAGAT................................................2211.00100100000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGACCTGCTCAACGTGCGGG.............................2211.00100010000000
droEre2
CTTT-TT-ATGTACC-----T--CG----A--TTTT--------GT-AAT-----T----A---TT-----------ATTT-----TTTTATAATGCAACA------CT-T-----------------TATAATTTGAT--------TTTCCAATTTGTTTA-CTTTTCATATATAATTTTGTTGTTATTG---TTATTGTGCTTAACAAA---------A---------TACAACTTGCG----CTGC---TT-----------GCTAA--ACC-------------------------------------------------------------------------------------ACTTGTTGCATGACCTGCCCCG--------------------------------------------------------------------------------CCCC-----GCCCTG-----------C-----CACG----ACTGC----AAAA------------------------A--------------------------ACTGACCAAAAATC-----------------------GAATCCAGATGACCTGCTCAACGTGCGGGGCAAGAACAAACTGCTGCAGGAGGAAATGSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGTGCGGGGCAAGAACAAACTGC..............2511.0011000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGAACAAACTGCTGCAGG........1911.0011000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGCTGCAGGAGGAAATG1811.0010000010
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCAACGTGCGGGGCAAG........................1911.0011000000
dp5
AGTT-TTAGTGTATCACACCT--TGAG--A--TATTA----------CTTTCCTT---TTA---TT-----------TG-----CTGTT---TATCCAAAAA---------ACATTCCTTAATTTATT-------------------TGTATTTTTTATTTA-TTTTTCATATATTATT-TGTTGTTAAT------GTTGTGCTTAACAAA---------A-----ACAATACAACTTGCG----CTGC---TT-----------G---------------------------------TACCCTCGCTCGCTCGCTCGATCG--------------------------------CTAAATTTTGTTGTAAAACCTGCC------------------------------------------------------------------------TGCATGCACCGTC----------C--------------------------AATCCC----CAAC------------AACAAAA-----------------------------------------------------------CAA--AC---G--AACAGATGACTTGCTGAATGAGCGCGGAAAGAACAAACTGCTGCAGGAGGAAATGSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAAACTGCTGCAGGAGGAA...2113.0030210000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGGAAAGAACAAACTGCTGCAGGAG......2611.0010000000100
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAATGAGCGCGGAAAGAACA....................2011.0011000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGACTTGCTGAATGAGCGC..............................1911.0010100000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGAACAAACTGCTGCAGGAGG.....2211.0010000000001
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGGAAAGAACAAACTGCTGCAGGAGG.....2711.0010000000001
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGAATGAGCGCGGAAAGAACAA...................2411.0010010000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G--AACAGATGACTTGCTGAATGAGCGC..............................2611.0010010000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGAAAGAACAAACTGCTGCAGGAG......2511.0010000000001
................................................................................................................................................................................................................................................................................................................................................................................TAAAACCTGCC------------------------------------------------------------------------TGCATGCACC........................................................................................................................................................................................................2111.0010100000000
droPer2
AGTT-TTAGTGTACCACACCT--TGAG--A--TATTA----------CTTTCCTT---TTA---TT-----------TG-----CTGTT---TATCCAAAAA---------ACATTCCTTAATTTATT-------------------TGTATTTTTTATTTA-TTTTTCATATATTATT-TGTTGTTAAT------GTTGTGCTTAACAAA---------A-----ACAATACAACTTGCG----CTGC---TT-----------G---------------------------------TACCCTCGCTCGCTCGCTCGATCG--------------------------------CTAAATTTTGTTGTAAAACCTGCC------------------------------------------------------------------------TGCATGCACCGTC----------C--------------------------AATCCC----CAAC------------AACAAAA-----------------------------------------------------------CAA--AC---G--AACAGATGACTTGCTGAATGAGCGCGGAAAGAACAAACTGCTGCAGGAGGAAATGSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.........................................................................................................................................................................................................................................................................................................................CGCTCGATCG--------------------------------CTAAATTTT.........................................................................................................................................................................................................................................................................................................1913.003300000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAAACTGCTGCAGGAGGAA...2113.003000003
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAATGAGCGCGGAAAGA.......................1811.001010000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGACTTGCTGAATGAG.................................1811.001100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGAACAAACTGCTGCAGGA.......2011.001010000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACAAACTGCTGCAGGAGG.....2011.001001000
droWil2
CTT---G-ATT---CCCACTT--TG----A--TGTACATATA-AGTAATT-----T----A---CT-----------ATGT-----TTT---T-------A-------T-T-----------------TTTCATTTGATTTATTGTTTAACCATTTTATTTATTTTTTCATATCTCAATAATTT------G---TTGTTGTGCTTAACCCACCGAACGCCAAAAAA----AAAAA----------------------------------AA-AAAAACGCCAACCTG------------C----TCGCTCGCCCGCTCGCTCGTCCCCCTTGCCCTAATTGTTTATTAAATAAAACAAAATTATGTTGCATGCCG---------------------------------------------------------------------------------------CC----------GAT-----------C-----TATGCCTC----C----AAAAATTACACCCCCAAACA------CAC--------ACA--------CACACACACTG----------------------AAATTTACAC---CATCAGATGACTTGCTGAATGAGCGGGGCAAGAATAAACTGCTGCAGGAGGAAATGSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGACTTGCTGAATGAGC................................1911.00100100
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATAAACTGCTGCAGGAGGAAATG2411.00100100
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGACTTGCTGAATGAGCGGGG............................2311.00100100
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGATGACTTGCTGAATGAGCGGGGCAAG........................2811.00110000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAAACTGCTGCAGGAGGAA...2011.00100100
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGACTTGCTGAATGAGCGGGGCAA.........................2611.00100100
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGACTTGCTGAATGAG.................................1811.00100010
droVir3
GTTCCTT-ATGTTAG-----TCCAG----A--TTTAAATTGAT--C-ATT-------TTT------------------------ATTTC---TATAC----CA-------------------------ATTAATATA----------TATTTT-TGTGTTTA-TTTTTCATA--TGATTTTGTT-----CG---TTGTTGTTCTTAACCGA---------AAAAAA---AAAAAAC---------------------------------AA-ACAAATTACAACTTATGTGCCGCT-TGTACGCTC------------------------------------------------------------------------CCCGCCCGCCTCACCGCCTGCGAACC---GCCAACGCCCTAATGTTTATTGTT--TA---TTTTT------TATGCATGCCTCGTGTTGCTGTT-----------------TTTGTTATT----GTTTTAACAAAAA--------------CAAAAAAAAAA--------AAACAATTTT-A-------ATA----------------------AA-A--AAAA---AAACAGACGACTTGTTGAACGAACGAGCCAAGAACAAACTGCTGCAGGAGGAAATGSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
...........................................................................................................................................................................................................TTAACCGA---------AAAAAA---AAAAAA..........................................................................................................................................................................................................................................................................................................................................................................................................................................2013.003000000000000000000000000000030000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAACTGCTGCAGGAGGAAAT.2011.001000000000010000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAA---AAACAGACGACTTGTTGAACGAAC................................2711.001000000000000001000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGACGACTTGTTGAACGAACGAGC............................2411.001000100000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGACGACTTGTTGAACGAAC................................2011.001000100000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGCCAAGAACAAACTGCTGC...........2111.001000000000000000000000000000001000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACTTGTTGAACGAACGAGCC...........................2111.001000000000000010000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACTTGTTGAACGAACGAGC............................2011.001001000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTGCTGCAGGAGGAAATG1911.001000000000000000000000000000000000000100000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCAAGAACAAACTGCTGC...........1911.001001000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACGAGCCAAGAACAAACT................2011.001001000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACTTGTTGAACGAACGA..............................1811.001000000000000000000000000000000001000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCATGCCTCGTGTTGCTGTT-----------------TTT.........................................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACAAACTGCTGCAGGAGGAA...2211.001000000000000001000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAGAACAAACTGCT.............1520.501000000000000000000000000000000000000000000000000000000000010000
...........................................................................................................................................................................................................TTAACCGA---------AAAAAA---AAAAAAA---------------------------------........................................................................................................................................................................................................................................................................................................................................................................................................21200.051000000000000000000000000000010000000000000000000000000000000000
droMoj3
ATTT-TT-ATTT------------G----T-ATTTAA-TTTTT--T-ATT-------TTT------------------------ATATT---TATGC----CT-------------------------ATTAATATAAC--------TATTTT-AATGTTTA-TTTTTCATA--TGATTTTGTT-----CG---TTGTTGTGCTTAACCGA---------AAAAAA----AACAA----------------------------------AA-ACCAATTTCAACTTGTGTGCCGCT-TGTACGCTCCC-CGCCTGCT----------------------------------------------------------------------------------GAACCAACGCCAACGCCCTAATGTTTATTGTT---A---TTTAA------AATGCATGCCACGTATCGCTGTGCTCTTTTTTGTTCCTACTTTGTTATT----GTTGA----AAC--------------------------------------------------------------------------------A----------AAAAAGACGACTTGTTGAACGAACGCGCCAAGAACAAACTGCTGCAGGAGGAGATGSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGACTTGTTGAACGAACGC..............................1911.001000010
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAAACTGCTGCAGGAG......1811.001100000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGTTGAACGAACGCGCCA..........................1911.001100000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCGCCAAGAACAAACTGC..............1911.001100000
droGri2
GAC--TT-ATATTAC---------------------------------TTT-------TTA---TTTTTTCTTTATTACC----------------C----CTATTAAT-A-----------------TA---TATATT--------TTTTTTGTATGTTTA-TTTTTCATA--TGATTTTGTT-----CG---TTGTTGTGCCTAACCT----------T---------TACAACTTGTG------------------------------------------------TGCTGCTTTGTACGCTCCC-CGCCTGC-----------------------------------------------------------------------------------GATCC---GCCAACGCCCTAATGTTGATTGTTATTATTATTTAAAACGCTGCTGCATGCCACGTGTTGCCGTTATATATATT--------TTTGTAATT----GCTTA----AAAA------------------------A-----------------------AACAATGATA----------------------A--ACA---CACGCAGACGACTTGGTGAACGAACGCGCTAAGAACAAACTGCTGCAGGAGGAGATGSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTGCTGCAGGAGGAGATG1911.00110
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAACAAACTGCTGCAGGAG......2011.00101
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTAAGAACAAACTGCTGCAGGA.......2311.00110
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAACTGCTGCAGGAGGAGATG2111.00110

Generated: 05/18/2015 at 02:23 AM