ID:

dan_1539

 Coordinate:

scaffold_13248:2216626-2216898 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-30.7 -30.7 -30.6

Flybase annnotation

exon [dana_GLEANR_6354:2]; CDS [Dana\GF22383-cds]; exon [dana_GLEANR_6354:1]; CDS [Dana\GF22383-cds]; intron [Dana\GF22383-in]

Repeatable elements

NameClassFamilyStrand
(CA)nSimple_repeatSimple_repeat+
mature
star
  1. dan_1539  scaffold_13248:2216859-2216880 -
  2. scaffold_13337:12881948-12881969 +

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
ATTTTGCTTGCAAAAAAACGCATGCAAAAATAATTCAACAGATAATAGAGGTGTGTGTGTGTGTGTGTGTGTGTATGTGTGTGGGTGGTGTTTTATTTTTCTCTCTCTGTATGAGTATATGTGTGTCTGTGTGTGGGTGTCATTCATTCATTTATTCAGAGTATCAATGATTCGTTGGAATGGATTTCGATTCTATTATTTTTTTTTGTTCAAGTGAAAAACAATATTCATTGCTAATCCATGTGTTTTATATTCTCTCTCTTCTCTTTTTTTCTCTCGGTGTTGCTGTGTGTTCCTTATCCTTATCGATATCCTGAAAACAGGACATAATGTGCCAACAAAAGCAACGAGCAACGGGACAATGTGTGCCAAT
********************************************************************(((((((((((.((.(((((((..((.((((((.(((((((.((((((..(((.(((.((.......))...))).)))..)))))).)))))..((((((...))))))((((((.......))))))...............)).)))))).))....))))))).)).))))))...)))))........................((((...))))************************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total M044
female body
 M058
embryo
 V106
head
 V055
head
 V039
embryo
 V105
male body
....................................................................................................................................................................................................................................................................................................................................................AAAGCAACGAGCAACGGGAC............. 20 0 1 1.00 1 0 1 0 0 0 0
...................................................................................................................................................................................................................................................................................................................................................AAAAGCAACGAGCAACGGGACAATGT........ 26 0 1 1.00 1 0 1 0 0 0 0
.........................................ATAATAGAGGTGCGTGTGTG........................................................................................................................................................................................................................................................................................................................ 20 1 1 1.00 1 1 0 0 0 0 0
..................................................................................................................................................................................................................................................................................................................................GGACATAATGTGCCAACAAAAGCAACG........................ 27 0 1 1.00 1 1 0 0 0 0 0
......................................................................................................................................................................................................................................................................TCTCTTTTTTTCTCTCGGTGTTGCTG..................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0
....................................................................GTGTGTATGTGTGTGGGTGGTG........................................................................................................................................................................................................................................................................................... 22 0 2 0.50 1 0 0 1 0 0 0
.......................................................................................................................................................................................................................................................................................................................................................GCAACGAGCAACGGGGCAT........... 19 2 3 0.33 1 0 0 0 0 1 0
......................................................................................................................................................................................................................................................................................................................................................AGCAACGGGCAACGGGACATC.......... 21 3 4 0.25 1 0 0 0 1 0 0
............................................................................................................................................................................................................................................................................................................................................CGCCAACAAAAACAACGAGC..................... 20 2 6 0.17 1 0 1 0 0 0 0
....................................................................................................................................................................................................................................................................................................................................................GAAGCAACGGGCAACGGGGCA............ 21 3 6 0.17 1 0 0 0 1 0 0
...............................................................................TGTGGGTGGTGGTTCATT.................................................................................................................................................................................................................................................................................... 18 2 15 0.13 2 0 0 2 0 0 0
........................................................................................................................................................................................................................................................................................................................................................CAACGGGCAACGGGACAT........... 18 2 8 0.13 1 0 0 0 0 1 0
.............................................................................................................................................................................................................................................................................TTTTCTCTCGGTCATGCTCTG................................................................................... 21 3 8 0.13 1 1 0 0 0 0 0
................................................................................................................................................................................................................................................................................................................................................AAAAAAAGCAACGAACAAGGGG............... 22 3 9 0.11 1 0 1 0 0 0 0
......................................................................................................................................................................................................................................................................TCTGTTGTTTTCTCTCGATGT.......................................................................................... 21 3 12 0.08 1 0 0 0 0 1 0
....................................................................................................................................................................................................................................................................CTTCTCTTTTTTTCTCTCCT............................................................................................. 20 2 12 0.08 1 0 1 0 0 0 0
........................................................................................................................................................................................................................................................................TCTTTGTTTCTCTAGCTGTTGC....................................................................................... 22 3 12 0.08 1 0 0 0 1 0 0
...............................................................................TGTGGGTGGTGTTTCATG.................................................................................................................................................................................................................................................................................... 18 2 12 0.08 1 0 0 0 0 0 1
..................................................................GTGTGGGTATGTGTATGGTTGGT............................................................................................................................................................................................................................................................................................ 23 3 13 0.08 1 0 0 0 1 0 0
...............................................................................................................................................................................................................................................................................................................................................GAAAAAAAGCAACGGGCAACG................. 21 3 14 0.07 1 0 1 0 0 0 0
................................................AGGTGTGTGTGTGTGTGTGTGTGT............................................................................................................................................................................................................................................................................................................. 24 0 16 0.06 1 1 0 0 0 0 0
............................................................................................................GTATGCGTAGATGTGTGTCG..................................................................................................................................................................................................................................................... 20 3 18 0.06 1 0 0 0 1 0 0
..............................................................GTGTGTGTGTGTATGTGT..................................................................................................................................................................................................................................................................................................... 18 0 20 0.05 1 1 0 0 0 0 0
.......................................................................TGGATGTGTGTGGGTGGTGG.......................................................................................................................................................................................................................................................................................... 20 2 20 0.05 1 0 0 1 0 0 0
..................................................GTGTGTGTGTGTGTGTGTGTGTGTA.......................................................................................................................................................................................................................................................................................................... 25 0 20 0.05 1 0 0 1 0 0 0
.......................................................................................................................................................................................................................................................................................................................................................GCAACGAGCAACGGGGA............. 17 2 20 0.05 1 0 0 0 1 0 0
..................................................................................................................................................................................................................................................................................TCTCGGGGTTGCTATGTAT................................................................................ 19 3 20 0.05 1 0 0 0 1 0 0

Anti-sense strand reads

TAAAACGAACGTTTTTTTGCGTACGTTTTTATTAAGTTGTCTATTATCTCCACACACACACACACACACACACATACACACACCCACCACAAAATAAAAAGAGAGAGACATACTCATATACACACAGACACACACCCACAGTAAGTAAGTAAATAAGTCTCATAGTTACTAAGCAACCTTACCTAAAGCTAAGATAATAAAAAAAAACAAGTTCACTTTTTGTTATAAGTAACGATTAGGTACACAAAATATAAGAGAGAGAAGAGAAAAAAAGAGAGCCACAACGACACACAAGGAATAGGAATAGCTATAGGACTTTTGTCCTGTATTACACGGTTGTTTTCGTTGCTCGTTGCCCTGTTACACACGGTTA
*************************************************************************************(((((((((((.((.(((((((..((.((((((.(((((((.((((((..(((.(((.((.......))...))).)))..)))))).)))))..((((((...))))))((((((.......))))))...............)).)))))).))....))))))).)).))))))...)))))........................((((...))))******************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M058
embryo
 V105
male body		 V039
embryo
 M044
female body
 V106
head
...................................................................................CCACCAGTAAATAGAAAGAGAG............................................................................................................................................................................................................................................................................ 22 3 1 1.00 1 1 0 0 0 0
...............................................................................................................................................................................................................................................................AGAGAGAAGAGAAAAAAAGA.................................................................................................. 20 0 1 1.00 1 0 1 0 0 0
..................................................................................................................................CACACCCACGGTAAGTAAG................................................................................................................................................................................................................................ 19 1 1 1.00 1 1 0 0 0 0
.............................................................................................................................................................................................................................................................AGAGAAGGAAGAGAAAAAAAGAG................................................................................................. 23 2 1 1.00 1 0 1 0 0 0
............................................................................................................................................................................................................................................................AAGAGAGAGAAGGGAAAAAAA.................................................................................................... 21 1 1 1.00 1 0 1 0 0 0
............................................................................................................................................................................................................................................................AAGAGACAGAAGAGAAAAAA..................................................................................................... 20 1 1 1.00 1 1 0 0 0 0
.........................................................................................................................................................................................................................TTGTGTGATGAGTAACGATTA....................................................................................................................................... 21 3 1 1.00 1 0 1 0 0 0
....................................................................................CACCTCAAAATAAAAAGA............................................................................................................................................................................................................................................................................... 18 1 2 0.50 1 1 0 0 0 0
........................................................................................................................................................................................................................................................................................AGAAGGACACACAAGGAATA......................................................................... 20 2 2 0.50 1 1 0 0 0 0
...............................................................................ACACCCACCACATCACAAAAAGA............................................................................................................................................................................................................................................................................... 23 3 2 0.50 1 1 0 0 0 0
.....................................................................................ACCACAAAATCAGAAGAGA............................................................................................................................................................................................................................................................................. 19 2 2 0.50 1 1 0 0 0 0
...............................................................................................................................................................................................................................................................AGAGAGAAGAGAAAAAAAGAA................................................................................................. 21 1 2 0.50 1 1 0 0 0 0
..............................................................................CACCCCCAACACAGAATAAAAAG................................................................................................................................................................................................................................................................................ 23 3 2 0.50 1 1 0 0 0 0
...............................................................................ACACCCAACGCAAAGTAAAAAGA............................................................................................................................................................................................................................................................................... 23 3 3 0.33 1 1 0 0 0 0
.....................................................................................................................................................................................................................................................AAAATATAACAGGGAGAAGAAAAA........................................................................................................ 24 3 3 0.33 1 0 0 0 1 0
...................................................................................CCACCACCAAATAAAAAGAGT............................................................................................................................................................................................................................................................................. 21 2 3 0.33 1 1 0 0 0 0
...........................................................................................................................................................................................................................................................................AAAAAACCGAGCCACAACGA...................................................................................... 20 2 4 0.25 1 1 0 0 0 0
.........................................................................ATACACACATCCACCAAAAA........................................................................................................................................................................................................................................................................................ 20 2 4 0.25 1 1 0 0 0 0
..........................................................................................................................................................................................................................................................AGAAGAGAGAGAAGAGCCAAAA..................................................................................................... 22 3 5 0.20 1 0 1 0 0 0
...................................................................................................................................................................................................................................................................AGAAGAGAAACAAAGAGA................................................................................................ 18 1 5 0.20 1 0 0 1 0 0
...................................................................................CCACCAGAGAATAAAAAGA............................................................................................................................................................................................................................................................................... 19 2 5 0.20 1 1 0 0 0 0
..................................................................................CCCACCACAAAATAAAAAA................................................................................................................................................................................................................................................................................ 19 1 5 0.20 1 1 0 0 0 0
.......................................................................................................................................................................................................................................................AGTATAAGAGAGAGAAGAAAATA....................................................................................................... 23 3 6 0.17 1 0 1 0 0 0
...................................................................................CCACCACAAAATCACAACAGA............................................................................................................................................................................................................................................................................. 21 3 6 0.17 1 1 0 0 0 0
..................................................................................................................................CACACCCACACCAAGTAAG................................................................................................................................................................................................................................ 19 2 6 0.17 1 0 0 1 0 0
......................................................................................................................................................................................................................................................AAAGATAAGAGAGAGAAATGAAAA....................................................................................................... 24 3 6 0.17 1 0 1 0 0 0
.............................................................................................................................................................................................................................................................AGAGAGAGAAAAGCAAAAAAG................................................................................................... 21 2 7 0.14 1 0 0 1 0 0
....................................................................................CACCACAAAATAAAAATA............................................................................................................................................................................................................................................................................... 18 1 7 0.14 1 1 0 0 0 0
............................................................................................................................................................................................................................................................AAGAGAGAGAACAGAAAAAGA.................................................................................................... 21 2 8 0.13 1 0 1 0 0 0
......................................................................................CCACAAGACAAAAAGATAGAGA......................................................................................................................................................................................................................................................................... 22 3 9 0.11 1 1 0 0 0 0
................................................................................CACCCACCACAACCTAAAA.................................................................................................................................................................................................................................................................................. 19 2 9 0.11 1 1 0 0 0 0
....................................................................................CACCACAACCTAAAAAGAG.............................................................................................................................................................................................................................................................................. 19 2 10 0.10 1 1 0 0 0 0
.................................................................................ACCCACCTCGAAACAAAAAGA............................................................................................................................................................................................................................................................................... 21 3 10 0.10 1 1 0 0 0 0
...................................................................................................................................................................................................................................................AGTAAATATAAGAGAGAGGAG............................................................................................................. 21 3 11 0.09 1 0 0 1 0 0
........................................................................................................................................................................................................................TTTTTGTTTTGAGTAACGAGTA....................................................................................................................................... 22 3 11 0.09 1 0 0 1 0 0
............................................................................................................................................................................................................................................................AAGAGAAAGAAGAGAAAAA...................................................................................................... 19 1 11 0.09 1 0 1 0 0 0
......................................................................................................................................................................................................................................................................................CCACAAGGAAACACAATGAA........................................................................... 20 3 11 0.09 1 1 0 0 0 0
.................................................................................................................................................................................................................................................................AGACAAGGGAAAAAAAGAGA................................................................................................ 20 2 11 0.09 1 1 0 0 0 0
.....................................................................................................................................................................................................................................................AAAAAATAAGAGAGAGAA.............................................................................................................. 18 1 12 0.08 1 0 1 0 0 0
............................................................................................................................................................................................................................................................GAGAGAGAGAAGAGAAAA....................................................................................................... 18 1 12 0.08 1 0 1 0 0 0
.........................................................................................................................................ACAGTAAGCAAGTAAAGA.......................................................................................................................................................................................................................... 18 2 13 0.08 1 1 0 0 0 0
.................................................................................ACCCACGACAACATAAAAA................................................................................................................................................................................................................................................................................. 19 2 13 0.08 1 1 0 0 0 0
.................................................................................................................................................................................................................................................................................................................................................TGATTCCGTTGCTCATTGC................. 19 3 13 0.08 1 0 0 0 1 0
...............................................................................................................................................................................................................................................................AGAGAGAAGAGACAAAAA.................................................................................................... 18 1 14 0.07 1 0 0 0 0 1
...............................................................................................................................................................................................................................................................AGACAGAAGAGAAAAAAA.................................................................................................... 18 1 14 0.07 1 1 0 0 0 0
...................................................................................CCACCAGAAAATAGAAAG................................................................................................................................................................................................................................................................................ 18 2 15 0.07 1 1 0 0 0 0
........................................................................................................................................................................................AAAGCGAAGATTATAAAATAAAA...................................................................................................................................................................... 23 3 17 0.06 1 1 0 0 0 0
.............................................................................ACACCCCCACCACAAAAAA..................................................................................................................................................................................................................................................................................... 19 2 19 0.05 1 1 0 0 0 0
..........................................................CACACACACACACACATACAC...................................................................................................................................................................................................................................................................................................... 21 0 20 0.05 1 0 0 1 0 0
...................................................................................................................................................................................................................................................................ACAAGAGAAAAAAAGAAAGACAC........................................................................................... 23 3 20 0.05 1 1 0 0 0 0
...........................................................ACACACACACACACATACAC...................................................................................................................................................................................................................................................................................................... 20 0 20 0.05 1 1 0 0 0 0
...................................................................................CCACCACAATAGAAAAAGAAA............................................................................................................................................................................................................................................................................. 21 3 20 0.05 1 1 0 0 0 0
................................................................................................................................................................................................................................................................................................ACACAAGGAACAGGAAAA................................................................... 18 2 20 0.05 1 1 0 0 0 0
........................................................................................................................................................................................................................................................................AGAAAGAAAGCAAGCCACAA......................................................................................... 20 3 20 0.05 1 1 0 0 0 0
.....................................................................................................................................................................................................................................................................................................................................................TTCGTTGCTTCTTACCCTGTT........... 21 3 20 0.05 1 0 0 0 1 0
....................................................CACACACACACACACACACACATA......................................................................................................................................................................................................................................................................................................... 24 0 20 0.05 1 1 0 0 0 0
.............................................................................................................................................................................................................................................................AGAGAGATAAGAGGAAAAA..................................................................................................... 19 2 20 0.05 1 1 0 0 0 0
.............................................................................................................................................................................................................................................................ACAGAGAGCAGAGAAAAA...................................................................................................... 18 2 20 0.05 1 1 0 0 0 0
................................................................................CACCCACGACAAAACAAAAA................................................................................................................................................................................................................................................................................. 20 2 20 0.05 1 1 0 0 0 0
.....................................................ACACACACACACACACACACATAC........................................................................................................................................................................................................................................................................................................ 24 0 20 0.05 1 0 0 0 1 0
...........................................................................ACACACACCCAGCAAAAAA....................................................................................................................................................................................................................................................................................... 19 2 20 0.05 1 0 0 1 0 0
..............................................................................CAAAACCACCACAAAATAA.................................................................................................................................................................................................................................................................................... 19 2 20 0.05 1 1 0 0 0 0
..........................................................CACACACACACACACATACA....................................................................................................................................................................................................................................................................................................... 20 0 20 0.05 1 1 0 0 0 0
........................................................................................................................................................................................................................................................................................ACCACGACAAACAAGGAAGA......................................................................... 20 3 20 0.05 1 1 0 0 0 0
...............................................................................ACACCAACCCCAAAATAAAA.................................................................................................................................................................................................................................................................................. 20 2 20 0.05 1 1 0 0 0 0
.....................................................................................................................................................................................................................................................................................................................................................TTCGTTGCTTCTTACCCTGT............ 20 3 20 0.05 1 0 0 0 1 0
..........................................................................................AAAGGAAAAAGAGAGAGACA....................................................................................................................................................................................................................................................................... 20 2 20 0.05 1 0 0 1 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droAna3 scaffold_13248:2216576-2216948 - dan_1539 ATT------------------------------TTGCTTGCAAAAAAACGCATGCAAAAATAATTCAACAGATAAT---AGAGGTG------------------------------TGTGTGTGTGTG------------T----GTG--------T-GTGTATGTGTGTGGGTGGTGTTTTATTTTTCTCTCTCTGTATGAGTATA--TGTGTGT-------------------------------------------------CTGTGT--------GTG-GGTG------------T-------CA----TTCATTCATTTATTC---------AG-AGT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A----------------------------------------------TCAATGATTCGTTGGAATGGATTTCGATTC-----T--------------------------------------------------------------------------------------------------------------------------------------------------------ATTATT-T-TTTTT----------TGT-------TCAAGTG-A--------A-------AAACAATA--TTCATTGCTAATCCATGTGTT--TTATATTCTCTCTCTTCT--C--TTTTTTTCTCT----CGGTG-TTGCTGTG--------------------TGTTCCTTAT--------------------------------------------CC------------------------------------------TTATC--------------------------GATATCCTG---------AAAACAGGACATAATGTGCCAACAAAAGCAACGAGCAACGGGACAATGTGTGCCAA----T-------------------
droBip1 scf7180000396575:674843-675162 + ATT------------------------------TTGCTTGCAAAAAAACGCATGCAAAAATAATTCAACAGATAAT---AGAGGTGCGGGGGTGGTATTTTTTCTCAATTTCTCTCTGTGTGTGT----------------------GTAT--GAGTA-----------------------------------------------TG--A-----------------------------------------------------GTGTGTGT--------GTG-TCTG---------------------------TCATTCATAAAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATA-------------------------------------------ATATAAA----------------------ATA------------------------------------------------------------------------------------------------------------------------------T---G------------------------ATTGAGTATT-TTTTTTC----------AAG------------TG-T--------A-------AAATATT---ATCCATGCTAATCCATGTGTT--CTCTATT-------CTCTCTC--TTTTTTTCTCT----CGGTG-TCGCTGTG--------------------TGTT----AT--------------------------------------------CC--TT-----------------------------------------------------------------------TATCCTTTTACAAAAAAAAACAGGACATAATGTGCCAACAAAAGCAACGAGCAACGGGACAATGTGCGCCAA----T-------------------
droKik1 scf7180000302398:413981-414142 + GTG------------------------------T-GTGTGT----------------------------------------------------------------------------------GTGTG------------T----GTG--------T-GTGTGTGTGTGTGTGTGTGTG--TGTGTGTGTGTGTGTGTGTGTGTGTG--TGTGTGT-------------------------------------------------GTGTGT--------GTG-TGTGTG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TT--------------------------------------GTG-TATGTGTACGCATTAAAGGTAAAATATGTTTT--------------------------------------------------------------------------------G-TTATCAATG---T---TTTCAATGCTTTTCCAT------------TTT-CTC----------------------------------------------------------------T----T-------------------
droFic1 scf7180000454073:484296-484662 + ATT------------------------------TTGCTTGCAAAAGAACGCATGCAAAAATAATTCAACAGATAATAACAGAGGTG------------------------------TGTGCTTGTGTG------------T------GTGCG--AGTG-----------------------------------------------TGTTT-----------------------------------------------------GTTTGAGT--------GTG-TGA----------------------GCGAGTCCATTCATAAACTTTGTCTACACAG-AAAAGAAT--TGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTGAAAT-------------------------------TCGAAATAGTCACGAATGCTTTA-------------------------A-----TCAAAT------------------------------------------------------------ATAA-----ATTA---AGATCAATGAATATTAT-----TTTCTGTGCCCACGTTGGAT----------------------------TTAT---A-----TA---------------------------TTTTTTTC----------TGG---T--------TG------------------------------CAATGCTAATCCATGTGT--GTTCTGTT-------CTCT--C--TTATTT----------CCCGA-------------------------------------TCCGA----------------------------------TCCGATCCG--ATCA------------T-----------------------------------------------------GTGATCCTC-----------CGCAGGACATAATGTGCCAACAAAAGCAACGAGCAACGGGACCATGTGCGCCAA----T-------------------
droEle1 scf7180000490982:642710-643072 + ATT------------------------------TTGCTTGCAAAAGAACGCATGCAAAAATAATTCAACAGATAATAACAGAGGTG------------------------------TGTGTGTGTGTGGCGTGAGCTGTGTGCT-GTG--------T-GTG---GTGTGTGTGTG------------------------CCAA---------------------------------------------------------------TGCGA--------GTG-TGTG------------T-------T-TTACTCCATTCATAAACTTTGTATGCACAG-AAAAGAAATTCGTT--------------------------------------------------------AT---------GTAT--------------------------------------------------------------------------------------------------------------------ACC-------------------------------------AGCTA------------------TC---------------------------------------------------CGATTCGAT----------------------------G------------------------CAAATTGT-----TTTCTGTGTA-----------------------------------------T---G----ATT---------------------------TTTTTTTC----------TGG------------TGTCTGATGCT-AATC--CA---T-G-TGAAACCATGCTAATCCCTGT----GTTCTGCT-------CTCT--C--TTTTTTT------------GA-------------------------------------TCCG-----------------------------------TC-----TGCTACCG------------T-----------------------------------------------------GTGATCCT-------------GCAGGACATAATGTGCCAACAAAAGCAACGAGCAACGGGACCATGTGCGCCAA----T-------------------
droRho1 scf7180000779765:20305-20660 - ATT------------------------------TTGCTTGCAAAAGAACGCATGCAAAAATAATTCAACAGATAATAACAGAGGTG------------------------------TGTGTGTGTGTG------------T----GTG--------T-GTG---GTGTGTGCGTG----------------------------------------------------------------------------------------------GT--------GTG-TGT--------------------------GTCCATTCATAAACTCTGTCTACACAG-AAAAGAAAATCGTCGA-----------------------------------------------------------------AT----------------------------------------------------------------------------------------------------------------------GAA-------------------------------------AGTCA------------------TC---------------------------------------------------CGTTTCGGTGGTTTCAGTTA---------------ATGTGA-----ACTGGCGA-AGCGATCGAAATTGT-----TTTCTGTGTACACCTTGG------------------------------TTAT---G----TTC---------------------------TTTTTTTC----------TGG------------TG-C----------------------------CTATGCTAATCCATGT----GTTCTGCT-------CTCT--C--TTTTCCC------------GA-------------------------------------TCCG-----------------------------------TCTGATCC--TT-------------CGCG------------------------------------------------------CATCCTC------------CCAGGACATAATGTGCCAACAAAAGCAACGACCAACGGGACCATGTGCGCCAA----T-------------------
droBia1 scf7180000302126:247676-247996 - ATT------------------------------TTGCTTGCAAAAGAACGCATGCAAAAATAATTCAACAGATAATAACAGAGGTG------------------------------TGTGTGTGTGTG------------T--------------------------------------------------------------------------------------------------------------------------------GA--------GAG-TGTG------------T-------CACAGGTTCATTCATAAACTCCGGCTACACAG-CAAGAAAAAGTGTG--------------------------------------------------------CGGCC----CCAT--------------------------------------------------------------------------------------------------------------------------------------------------------------AT----------------------CC----------------CCATA-----T------------------A----CGATGCGCT----------------------------G------------------------CG-------------------------------------GTTGTTTATGCTCATAAGAAATA--C---GAATCATC---------------------------TTTTTTTC----------TGG------------TGGCT-------A-------------CC--TCCCATGCTAATTCCTGT----GTTCTGTT-------CTCT--C--TTTTCTC-A----A--TGCGA-------------------------------------T--------------------------------------------CC--TC-------------CGC-------------------------------------------------------GATCCT-------------GCAGGACATAATGTGTCAACAAAAGCAACGACCAACGGGACCATGTGCGCCAA----T-------------------
droTak1 scf7180000415169:412587-413078 + ATT------------------------------TTGCTTGCAAAAGAACGCATGCAAAAATAATTCAACAGATAATAACAGAGGTG------------------------------TGTGTGCGAGTG------------T----GTGTG----------------------------------------------------------------------------------------------------------------------CGA-------------GT--------------------------GTCCATTCATAAACTCTGTCTACACGG-AAAATAAAAATGTG--------------------------------------------------------CGGTC---TTGATATACACAGAAAAAAAACAACAATTAATAAATAATATGTTTATGTTTGTTCAAAAAAATAACTCATTTGTTATTTTTAAATAGTATTTTTATATAATTTTTATGAAATAACTGTGTGATAAAATATCTAATTGATATGTATTAATCATAGATTTGA------C-------------------------------------A-----TCATA-TC---------GAA----------------------------------------------------------------------------TTT-----TTTCTGTGTATGCGT----TTTAGTGGTTGTTTAGATTGTTAAGAAATA--AAATAATGCATC---------------------------TTTTTTTC----------TGT-----------------------------------------------TGCTAATCCATGTGTT--CTCTGCT-------TTCT--C--TCTTTT----------TGTGAT-------------------------------CCCGATCC--------------------------------------CGATCCGATATCT---------------------------------------C--------------------------GCGATCCT-------------CCAGGACATAATGTGCCAACAAAAGCAACGACCAACGGGACCATGTGCGCCAA----T-------------------
droEug1 scf7180000409008:913899-914281 - ATT------------------------------TTGCTTGCAAAAGAACGCATGCAAAAATAATTCAACAGATAATAACAGAGGTG------------------------------TGTGTGTGT----------------------GTAC--TAGTG-----------------------------------------------TGT-A-----------------------------------------------------CTCTGTGT--------GTG-TGTG------------T-------TATAGGTTCATTCATAAAAACCATCTACACAG-AGAAGAAAACTGTG--------------------------------------------------------CGGTCGTTTCGAT----------------------------------------------------------------------------------------------------------------------ATA-------------------------------------AGCCA------------------TC-CGGTGAATGAGGAAAA-----TCAAA-AC---------GAATTTTCTA--------------------------------------------------------------------------------------------------------------------------------T---A-------------------------------CATTTTTTTTA----------TGG------------TG-ATCAA----AGTTCTT------TTC--CAAAATGCTAATCAATGT----GTTCTGCT-------CTCT--C--TTTTTTTCG-----------A-------------------------------------TCCG-----------------------------------TC-----TGGCGACTTGTGATCCTTCGGTGTGA--TGTTGATGATCTTAAT-ATG--------------------------CTGGTCTT-------------GCAGGACATAATGTGCCAACAAAAGCAACGACCAACGGGACCATGTGCGCCAA----T-------------------
dm3 chrX:14485072-14485405 - ATT------------------------------TTGCTTGCAAAAGAACGCATGCAAAAATAATTCAACAGATAATAACAGAGGTG------------------------------TGTGTGTGTGTG------------TGCTTGTG--------T-GTGTA------------------------------------------TG--T-----------------------------------------------------GTGCGTGT--------GTTGTGTG-----------------------AAGTCCATTCATAAACTCTGTCTACACGTCAAAAAAAAAACGTG--------------------------------------------------------CCCTT-------------------------------------------------------------------------------------------------------------------------CTGGCA--------------------------------TCGAAATAC----------------------------------------TCATA-----T------------------CTATG------------------------------------------------------------------------------------------------------------------------------C---G------------------------TGTGATACT--TTTTTTT----------TAG------------TG-CT----------------------ACGATTAATGCTAATCCCTGT----GTTCTGCT-------CTCT--C--TTTTTT----------TGCTA-------------------------------------T--------------------------------------------CC--TT-------------CGCGGTGATATGGTGATGTT---------G--------------------------CTGATCCT-------------GCAGGACATAATGTGCCAACAAAAACAACGAGCAACGGGACCATGTGCGCCAA----T-------------------
droSim2 x:13686404-13686736 - dsi_25086 ATT------------------------------TTGCTTGCAAAAGAACGCATGCAAAAATAATTCAACAGATAATAACAGAGGTG------------------------------TGTGTGGGT----------------------GTAT--ATGTG----------------------------------------------------------------------------------------------------------TGTGTGT--------GTG-TGTG------------C-------CACAAGTCCATTCATAAACTCTGTCTACACGG-CAAAGAAAAACGTG--------------------------------------------------------CCCTT-------------------------------------------------------------------------------------------------------------------------CTGGCA--------------------------------TCGAAATAT----------------------------------------TCATA-----T------------------ACATG------------------------------------------------------------------------------------------------------------------------------C---G------------------------AGTGATTCTTTTTTTTTC----------TGG------------TG-CTCCTGCT---CT--C--------ACGACTAATGCTAATCCCTGT----GTTCTGCT-------CTCT--C--TTTTTT----------TGCGA-------------------------------------T--------------------------------------------CC--TA-------------CGCGGTGA--TGGTGATGTT---------G--------------------------GTGATCCT-------------GCAGGACATAATGTGCCAACAAAAGCAACGAGCAACGGGACCATGTGCGCCAA----T-------------------
droSec2 scaffold_20:1076304-1076640 - ATT------------------------------TTGCTTGCAAAAGAACGCATGCCAAAATAATTCAACAGATAATAACAGAGGTG------------------------------TGTGTGGGT----------------------GTAT--ATATA-----------------------------------------------TAT-A-----------------------------------------------------GTATGTGT--------GTG-TGTG------------C-------CACATGTCCATTCATAAACTCTGTCTACACGG-CAAAGAAAAACGTG--------------------------------------------------------CCCTT-------------------------------------------------------------------------------------------------------------------------CTGGCA--------------------------------TCGAAATAT----------------------------------------TCATA-----T------------------ATATG------------------------------------------------------------------------------------------------------------------------------C---G------------------------AGTGATTCTT-TTTTTTC----------TGG------------TG-CTCCTGCT---CT--C--------ACGACTTATGCTAATCCCTGT----GTTCTGCT-------CTCT--C--TTTTTT----------TGCGA-------------------------------------T--------------------------------------------CC--TA-------------CGCGGTGA--TGGTGATGTT---------G--------------------------ATGATCCT-------------GCAGGACATAATGTGCCAACAAAAGCAACGAGCAACGGGACCATGTGCGCCAA----T-------------------
droYak3 X:8719429-8719773 - ATT------------------------------TTGCTTGCAAAAGAACGCATGCAAAAATAATTCAACAGATAATAACAGAGGTG------------------------------TGTGTCTGTGTG------------T----GTGTGCG--GGTG-----------------------------------------------TATCC-----------------------------------------------------GTATGTGT--------ATG-TGTG------------T-------CACAAGTCCATTCATAAACTCTGTCTACACGG-AAAAGAAAAACGTG--------------------------------------------------------CC---------ATATAC------------------------------------------------------------------------------------------------------TTGCTGTGTGATATA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGTGATTCTTTTTTTTTC----------TGG------------TG-CTCCTGCT-------C--------ACGACTTATGCTAATTCATGT----GTTCTGCT-------CTCT--GTCTTTTTTT---------TGCGA-------------------------------------T--------------------------------------------CC--TT-------------TGCGGTGA--TGGTGATGATGATGATGATG--------------------------GTGATCCT-------------GCAGGACATAATGTGCCAACAAAAGCAACGAGCAACGGGACCATGTGCGCCAA----T-------------------
droEre2 scaffold_4690:12488076-12488421 + ATT------------------------------TTGCTTGCAAAAGAACGCATGCAAAAATAATTCAACAGATAATAACAGAGGTG------------------------------TGTGTGTGT----------------------GTGCG--GGTG----------------------------------------------------------------------------------------------------------CATGTGT--------GTG-TGTG------------T-------CGCCAGTCCATTCATAAACTCTGTCTACACGG-AAAAGAAAAACGTG--------------------------------------------------------CCTGT-------------------------------------------------------------------------------------------------------------------------CTGGCA--------------------------------TCGGAATA----------------------------------------------TCAAATAC---------CAAATGTCTATG------------------------------------------------------------------------------------------------------------------------------C-------------------------------GACTCTT-TTTTTTC----------CAG------------TG-CTCCT----AACT--C--------ACGATTCTTGCTAATCCATGT----GTTCTGCT-------CTCT--C--TTTTTTT-T----AT---CGA-------------------------------------T--------------------------------------------GC--CC-------------CGCGGTGA--TGGTGATGATGGTCACGATG--------------------------GCGATCCT-------------GCAGGACATAATGTGCCAACAAAAGCAACGAGCAACGGGACCATGTGCGCCAA----T-------------------
dp5 XL_group1e:4786401-4786825 + ATT------------------------------TTGCTTGCAAAAAAACGCATGCAAAAATAATACAACAGATAAT---AGAGGTG------------------------------TGTGTGTTC-TC------------T------GTGCG--AGA-----------------G------------------------------------GGAGAGTCTTTATCAATGATATTATTACCAAAAAAGAATATATACATATACAGTATTTGGGACACTTGGTG-GGGGGAG------ACGTTGCGA---------------------T-----------G-----------CGACGAATTGGCAATTATCAAGTTCGCCGCGATGTCTAGTGCTTATCTGCGACACAGGAGTGTTCGACACGAT----------------------------------------------------------------------------------------------------------------------AC------------------------------------------------------------------------------------------------------GAA----A----CGATTCGAT----------------------------G------------------------CGAATGATAGATATACCCATGTA-----------------------------------------C---A-----TA-----------------------TCTT-CTTCTTT----------TTG---T---TCTCGTG-C------T-A------------ACA--CCCAATGCTAATCCATGTGTTTGATCTGTT--------TCT--C--CTATC---T----ATCGGTGAT-------------------------------CCC----------------------------------------------------TA------------CAC-----------------------------------------------------G-TGCCCT-------------ACAGGACATAATGTGCCAACAAAAGCAGCGAACAACGGGACAATGTGCGCCAA----T-------------------
droPer2 scaffold_17:1742177-1742317 + TTC------------------------------TT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTGTTC----------TCG------------TG-C------T-A------------ACA--CCCAATGCTAATCCATGTGTTTGATCTGTT--------TCT--C--CTATC---T----ATCGGTGAT-------------------------------CCC----------------------------------------------------TA------------CAC-----------------------------------------------------G-TGCCTT-------------ACAGGACATAATGTGCCAACAAAAGCAGCGAACAACGGGACAATGTGCGCCAA----T-------------------
droWil2 scf2_1100000004585:1383152-1383444 + ATGCAAAAGTATTACAGATATATTCCAAGCGAGTGGTTTGTGTATGTGTGTGTG--------------------------------------------------------------------TGTGTG------------T-------------------------GTGTGTGTGTGTG--TGTGTGTGTGTGTGTGTGTGTGTGTG--TGTGTGT-------------------------------------------------GTGTGT--------GTG-TGTGAGC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGTATGTATGTAGCCAATTT---------------------------------------------------CCATCTCAT----------------------------GTAAGCTCCACTT---TGGTTTATGGCTATTGC-----GTTT--------------------------------------------T--T---G--CCCCCTTTTTTTCAGC----------------------------------TGT-------TTGTGTG-C------GAAATC--G--------AAGTTTTATGCTAATTTCTAT----TTTCTCAT-------TTCT--C--TTTTTCTCTCTCTATCTCTTAT-------------------------------TCG----------------------------------------------------TA------------T---------------------------------------------------------------------------------------------------------------------------CTCTAT----C-------------------
droVir3 scaffold_12875:16496808-16497050 + GTG------------------------------T-GTGTGT----------------------------------------------------------------------------------CTGTG------------T----GTG--------T-GTGTATGTGTGTGTGTGTGTG--TGTGTGTGTGTGTGTGTGTGTGTGTG--TGTGTGT-------------------------------------------------GTTTGT--------ATG-TGTG---------------------------------------------------------------------------------------------------------------------------CCTTT-------------------------------------------------------------------------------------------------------------------------GTCTTA--------------------------------TCTTGTCTC----------------------------------------TCACA-----T------------------CTGC----------------------------------------------------------------AGA------------TTGCGTTGTCAT----TTTCGTT-----------------------------------------------------------------TTCGTTT----------TGA---GTGC-----TT-CTCTTGCA-------C--------ACGCTT--------TCTCTC------------TC-----TCTCT--C--TCTCTCTCTCT----CTCTG-TCTCTGTC-----TCACGCTAGAC--TGTTTT--------------------------------------------------------------------------------GCTTATC------------------------------------------------------------------------------------------------------TTTGTTTTTA----T-------------------
droMoj3 scaffold_6473:8750724-8751040 - GTG------------------------------T-GTGTGT----------------------------------------------------------------------------------GTGTG------------T----GTG--------T-GTGTGTGTGTGTGTGTGTGTG--TGTGTGTGTGTGTGTGTGTGTGTGTG--TGTGTGT-------------------------------------------------GTGTGT--------GTG-TGTGTGCTCGCGTGCATTACAA---------------------AGCGTCAGCGTTG-GTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGCAACGATGTCGACTC-----AAG---------TCTTAAGATAAGATTAA--AATGAAACCCAAC---TGAATCGCAGTCAAT---GA-------------------------------------------------------------------------------------------------------------------------------------------------------------------T--TCTATCT----CTC----TC-----CCTCT--C--TCTCTCTCTCC----CTGTG-TGTGTGTG-------------------------------------------------------------------------------------------------------TGCTGGTGTTCG---TTATCT--AT-----------GAAATCCATTGA---------------------------CAATGGGCCA------------GGCAATGGCTTTCT----GCTGAGCAATGCAAACAGCAGCAAAAAAA
droGri2 scaffold_15203:8975242-8975575 + TGT------------------------------ATGTA------------------------------------------------------------------------------------CGTGTG------------T----GTGTACATATGTA-----------------------------------------------TG-----------------------------------------------------------TACGT--------ATG-TGTA------------TCGAAAATAGCCACACTGTGCAGAAATTTTGTTTATCTGT-TTGAAAAAG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACACTAATT---TAGCTAGTCGCCGAT---GA-----------------------------------------------------T---A---TCCCTATCTTTAAACAGTGTGTGTGCTTTTT-TTTTTTTTTTTTTTTTTTTTTGATAAT-----TT-TTGTTGT-----------------------AACGAGAATTTTTTT----G-----AT-------TT-T--G--TTATTGT----------TTGA-------------------------------------ACTAATCTGTGATTGCATTTTGTTCTGTGATTTGCCACGTGCGACTC--TTA------------AAT-----------------------------------------------------GATACCGT-------------GTAGGACATAATGTGCCAACAAAAGCAACGAGCAATGGGACAATGTGTGCCAA----T-------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droAna3
ATT------------------------------TTGCTTGCAAAAAAACGCATGCAAAAATAATTCAACAGATAAT---AGAGGTG------------------------------TGTGTGTGTGTG------------T----GTG--------T-GTGTATGTGTGTGGGTGGTGTTTTATTTTTCTCTCTCTGTATGAGTATA--TGTGTGT-------------------------------------------------CTGTGT--------GTG-GGTG------------T-------CA----TTCATTCATTTATTC---------AG-AGT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A----------------------------------------------TCAATGATTCGTTGGAATGGATTTCGATTC-----T--------------------------------------------------------------------------------------------------------------------------------------------------------ATTATT-T-TTTTT----------TGT-------TCAAGTG-A--------A-------AAACAATA--TTCATTGCTAATCCATGTGTT--TTATATTCTCTCTCTTCT--C--TTTTTTTCTCT----CGGTG-TTGCTGTG--------------------TGTTCCTTAT--------------------------------------------CC------------------------------------------TTATC--------------------------GATATCCTG---------AAAACAGGACATAATGTGCCAACAAAAGCAACGAGCAACGGGACAATGTGTGCCAA----T-------------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGCAACGAGCAACGGGAC....................................2011.001010000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAGCAACGAGCAACGGGACAATGT...............................2611.001010000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGACATAATGTGCCAACAAAAGCAACG...............................................2711.001100000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCT--C--TTTTTTTCTCT----CGGTG-TTGCTG.........................................................................................................................................................................................................................................................2611.001100000
...................................................................................................................................................G--------T-GTGTATGTGTGTGGGTGGTG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2220.501000001
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTCT--C--TTTTTTTCTCT----CCT..................................................................................................................................................................................................................................................................20120.081010000
.................................................................................AGGTG------------------------------TGTGTGTGTGTG------------T----GTG--------T-GT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24160.061100000
.............................................................................................................................GTG------------T----GTG--------T-GTGTATGTGT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.051100000
...................................................................................GTG------------------------------TGTGTGTGTGTG------------T----GTG--------T-GTGTA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.051000001
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACGAGCAACGGGGA....................................17200.051000100
droBip1
ATT------------------------------TTGCTTGCAAAAAAACGCATGCAAAAATAATTCAACAGATAAT---AGAGGTGCGGGGGTGGTATTTTTTCTCAATTTCTCTCTGTGTGTGT----------------------GTAT--GAGTA-----------------------------------------------TG--A-----------------------------------------------------GTGTGTGT--------GTG-TCTG---------------------------TCATTCATAAAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATA-------------------------------------------ATATAAA----------------------ATA------------------------------------------------------------------------------------------------------------------------------T---G------------------------ATTGAGTATT-TTTTTTC----------AAG------------TG-T--------A-------AAATATT---ATCCATGCTAATCCATGTGTT--CTCTATT-------CTCTCTC--TTTTTTTCTCT----CGGTG-TCGCTGTG--------------------TGTT----AT--------------------------------------------CC--TT-----------------------------------------------------------------------TATCCTTTTACAAAAAAAAACAGGACATAATGTGCCAACAAAAGCAACGAGCAACGGGACAATGTGCGCCAA----T-------------------SizeHit CountTotal NormTotal
No Reads
droKik1
GTG------------------------------T-GTGTGT----------------------------------------------------------------------------------GTGTG------------T----GTG--------T-GTGTGTGTGTGTGTGTGTGTG--TGTGTGTGTGTGTGTGTGTGTGTGTG--TGTGTGT-------------------------------------------------GTGTGT--------GTG-TGTGTG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TT--------------------------------------GTG-TATGTGTACGCATTAAAGGTAAAATATGTTTT--------------------------------------------------------------------------------G-TTATCAATG---T---TTTCAATGCTTTTCCAT------------TTT-CTC----------------------------------------------------------------T----T-------------------SizeHit CountTotal NormTotal
No Reads
droFic1
ATT------------------------------TTGCTTGCAAAAGAACGCATGCAAAAATAATTCAACAGATAATAACAGAGGTG------------------------------TGTGCTTGTGTG------------T------GTGCG--AGTG-----------------------------------------------TGTTT-----------------------------------------------------GTTTGAGT--------GTG-TGA----------------------GCGAGTCCATTCATAAACTTTGTCTACACAG-AAAAGAAT--TGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTGAAAT-------------------------------TCGAAATAGTCACGAATGCTTTA-------------------------A-----TCAAAT------------------------------------------------------------ATAA-----ATTA---AGATCAATGAATATTAT-----TTTCTGTGCCCACGTTGGAT----------------------------TTAT---A-----TA---------------------------TTTTTTTC----------TGG---T--------TG------------------------------CAATGCTAATCCATGTGT--GTTCTGTT-------CTCT--C--TTATTT----------CCCGA-------------------------------------TCCGA----------------------------------TCCGATCCG--ATCA------------T-----------------------------------------------------GTGATCCTC-----------CGCAGGACATAATGTGCCAACAAAAGCAACGAGCAACGGGACCATGTGCGCCAA----T-------------------SizeHit CountTotal NormTotal
No Reads
droEle1
ATT------------------------------TTGCTTGCAAAAGAACGCATGCAAAAATAATTCAACAGATAATAACAGAGGTG------------------------------TGTGTGTGTGTGGCGTGAGCTGTGTGCT-GTG--------T-GTG---GTGTGTGTGTG------------------------CCAA---------------------------------------------------------------TGCGA--------GTG-TGTG------------T-------T-TTACTCCATTCATAAACTTTGTATGCACAG-AAAAGAAATTCGTT--------------------------------------------------------AT---------GTAT--------------------------------------------------------------------------------------------------------------------ACC-------------------------------------AGCTA------------------TC---------------------------------------------------CGATTCGAT----------------------------G------------------------CAAATTGT-----TTTCTGTGTA-----------------------------------------T---G----ATT---------------------------TTTTTTTC----------TGG------------TGTCTGATGCT-AATC--CA---T-G-TGAAACCATGCTAATCCCTGT----GTTCTGCT-------CTCT--C--TTTTTTT------------GA-------------------------------------TCCG-----------------------------------TC-----TGCTACCG------------T-----------------------------------------------------GTGATCCT-------------GCAGGACATAATGTGCCAACAAAAGCAACGAGCAACGGGACCATGTGCGCCAA----T-------------------SizeHit CountTotal NormTotal
No Reads
droRho1
ATT------------------------------TTGCTTGCAAAAGAACGCATGCAAAAATAATTCAACAGATAATAACAGAGGTG------------------------------TGTGTGTGTGTG------------T----GTG--------T-GTG---GTGTGTGCGTG----------------------------------------------------------------------------------------------GT--------GTG-TGT--------------------------GTCCATTCATAAACTCTGTCTACACAG-AAAAGAAAATCGTCGA-----------------------------------------------------------------AT----------------------------------------------------------------------------------------------------------------------GAA-------------------------------------AGTCA------------------TC---------------------------------------------------CGTTTCGGTGGTTTCAGTTA---------------ATGTGA-----ACTGGCGA-AGCGATCGAAATTGT-----TTTCTGTGTACACCTTGG------------------------------TTAT---G----TTC---------------------------TTTTTTTC----------TGG------------TG-C----------------------------CTATGCTAATCCATGT----GTTCTGCT-------CTCT--C--TTTTCCC------------GA-------------------------------------TCCG-----------------------------------TCTGATCC--TT-------------CGCG------------------------------------------------------CATCCTC------------CCAGGACATAATGTGCCAACAAAAGCAACGACCAACGGGACCATGTGCGCCAA----T-------------------SizeHit CountTotal NormTotal
No Reads
droBia1
ATT------------------------------TTGCTTGCAAAAGAACGCATGCAAAAATAATTCAACAGATAATAACAGAGGTG------------------------------TGTGTGTGTGTG------------T--------------------------------------------------------------------------------------------------------------------------------GA--------GAG-TGTG------------T-------CACAGGTTCATTCATAAACTCCGGCTACACAG-CAAGAAAAAGTGTG--------------------------------------------------------CGGCC----CCAT--------------------------------------------------------------------------------------------------------------------------------------------------------------AT----------------------CC----------------CCATA-----T------------------A----CGATGCGCT----------------------------G------------------------CG-------------------------------------GTTGTTTATGCTCATAAGAAATA--C---GAATCATC---------------------------TTTTTTTC----------TGG------------TGGCT-------A-------------CC--TCCCATGCTAATTCCTGT----GTTCTGTT-------CTCT--C--TTTTCTC-A----A--TGCGA-------------------------------------T--------------------------------------------CC--TC-------------CGC-------------------------------------------------------GATCCT-------------GCAGGACATAATGTGTCAACAAAAGCAACGACCAACGGGACCATGTGCGCCAA----T-------------------SizeHit CountTotal NormTotal
No Reads
droTak1
ATT------------------------------TTGCTTGCAAAAGAACGCATGCAAAAATAATTCAACAGATAATAACAGAGGTG------------------------------TGTGTGCGAGTG------------T----GTGTG----------------------------------------------------------------------------------------------------------------------CGA-------------GT--------------------------GTCCATTCATAAACTCTGTCTACACGG-AAAATAAAAATGTG--------------------------------------------------------CGGTC---TTGATATACACAGAAAAAAAACAACAATTAATAAATAATATGTTTATGTTTGTTCAAAAAAATAACTCATTTGTTATTTTTAAATAGTATTTTTATATAATTTTTATGAAATAACTGTGTGATAAAATATCTAATTGATATGTATTAATCATAGATTTGA------C-------------------------------------A-----TCATA-TC---------GAA----------------------------------------------------------------------------TTT-----TTTCTGTGTATGCGT----TTTAGTGGTTGTTTAGATTGTTAAGAAATA--AAATAATGCATC---------------------------TTTTTTTC----------TGT-----------------------------------------------TGCTAATCCATGTGTT--CTCTGCT-------TTCT--C--TCTTTT----------TGTGAT-------------------------------CCCGATCC--------------------------------------CGATCCGATATCT---------------------------------------C--------------------------GCGATCCT-------------CCAGGACATAATGTGCCAACAAAAGCAACGACCAACGGGACCATGTGCGCCAA----T-------------------SizeHit CountTotal NormTotal
No Reads
droEug1
ATT------------------------------TTGCTTGCAAAAGAACGCATGCAAAAATAATTCAACAGATAATAACAGAGGTG------------------------------TGTGTGTGT----------------------GTAC--TAGTG-----------------------------------------------TGT-A-----------------------------------------------------CTCTGTGT--------GTG-TGTG------------T-------TATAGGTTCATTCATAAAAACCATCTACACAG-AGAAGAAAACTGTG--------------------------------------------------------CGGTCGTTTCGAT----------------------------------------------------------------------------------------------------------------------ATA-------------------------------------AGCCA------------------TC-CGGTGAATGAGGAAAA-----TCAAA-AC---------GAATTTTCTA--------------------------------------------------------------------------------------------------------------------------------T---A-------------------------------CATTTTTTTTA----------TGG------------TG-ATCAA----AGTTCTT------TTC--CAAAATGCTAATCAATGT----GTTCTGCT-------CTCT--C--TTTTTTTCG-----------A-------------------------------------TCCG-----------------------------------TC-----TGGCGACTTGTGATCCTTCGGTGTGA--TGTTGATGATCTTAAT-ATG--------------------------CTGGTCTT-------------GCAGGACATAATGTGCCAACAAAAGCAACGACCAACGGGACCATGTGCGCCAA----T-------------------SizeHit CountTotal NormTotal
No Reads
dm3
ATT------------------------------TTGCTTGCAAAAGAACGCATGCAAAAATAATTCAACAGATAATAACAGAGGTG------------------------------TGTGTGTGTGTG------------TGCTTGTG--------T-GTGTA------------------------------------------TG--T-----------------------------------------------------GTGCGTGT--------GTTGTGTG-----------------------AAGTCCATTCATAAACTCTGTCTACACGTCAAAAAAAAAACGTG--------------------------------------------------------CCCTT-------------------------------------------------------------------------------------------------------------------------CTGGCA--------------------------------TCGAAATAC----------------------------------------TCATA-----T------------------CTATG------------------------------------------------------------------------------------------------------------------------------C---G------------------------TGTGATACT--TTTTTTT----------TAG------------TG-CT----------------------ACGATTAATGCTAATCCCTGT----GTTCTGCT-------CTCT--C--TTTTTT----------TGCTA-------------------------------------T--------------------------------------------CC--TT-------------CGCGGTGATATGGTGATGTT---------G--------------------------CTGATCCT-------------GCAGGACATAATGTGCCAACAAAAACAACGAGCAACGGGACCATGTGCGCCAA----T-------------------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGAGCAACGGGACCATGTGCGCCAA----T-------------------2719.0090000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGACATAATGTGCCAACA........................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.TT------------------------------TTGCTTGCAAAAGAACGCATGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGAGCAACGGGACCATGTG..............................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
..T------------------------------TTGCTTGCAAAAGAACGCA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAATGTGCCAACAAAAACA..................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGATATGGTGATGTT---------G--------------------------C.................................................................................................1911.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................TGCTTGTG--------T-GTGTA------------------------------------------TG--T-----------------------------------------------------GTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2021.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACGAGCAACGGGACCATGTGC.............................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGAGCAACGGGACCATGTGCGCC..........................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000
.......................................................................ATAATAACAGAGGTG------------------------------TGTG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAACAACGAGCAACGGGACC...................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAAAAACAACGAGCAACGGGACCAT.................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATGGTGATGTT---------G--------------------------CTGATCCT-------------GCAGGA.......................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAATGTGCCAACAAAAACAAA................................................2211.0010000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T--------------------------------------------CC--TT-------------CGCGGTGATATGGTGATG........................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
........................................................................................................................................................................................................................................................................TGCGTGT--------GTTGTGTG-----------------------AAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGAGCAACGGGACCATG................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
ATT------------------------------TTGCTTGCAAAAGAACGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCCAACAAAAACAACGA..............................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGAGCAACGGGACCATGTGCGCC..........................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGAGCAACGGGACCATGTGC.............................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGATATGGTGATGTT---------G--------------------------CTGA..............................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACGAGCAACGGGACCA..................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................G------------TGCTTGTG--------T-GTGTA------------------------------------------TG--T-----------------------------------------------------GTGCGTGT--------GTTGTGTG-----------------------A................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................3511.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................TA------------------------------------------TG--T-----------------------------------------------------GTGCGTGT--------GTTGTG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
................................................................TCAACAGATAATAACAGAGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
.......................................................................................................................................................................................................................................................................GTGCGTGT--------GTTGTGTG-----------------------AAGTCATC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGGGACCATGTGCGC...........................1711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGCAACGGGACCATGTG..............................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................TGCTTGTG--------T-GTGTA------------------------------------------TG--T-----------------------------------------------------GTGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
...........................................AAGAACGCATGCAAAAAT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................G------------TGCTTGTG--------T-GTGTA------------------------------------------TG--T-----------------------------------------------------GTGCG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T------------------CTATG------------------------------------------------------------------------------------------------------------------------------C---G------------------------TGTGATACT--C...............................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G------------------------------------------------------------------------------------------------------------------------------C---G------------------------TGTGATACT--TTTTTTT----------TA.............................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................AGAGGTG------------------------------TGTGTGTGTGTG------------TG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2130.6720000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000010000000000000000000000000000
..............................................................................................................................................CTTGTG--------T-GTGTA------------------------------------------TG--T-----------------------------------------------------GTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1860.1710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
.................................................................................AGGTG------------------------------TGTGTGTGTGTG------------TGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2070.1410000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................GGTG------------------------------TGTGTGTGTGTG------------TGCT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2070.1410000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
...................................................................................................................................................G--------T-GTGTA------------------------------------------TG--T-----------------------------------------------------GTGCGTGT--------GT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2070.1410000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
............................................................................................................................................................T-GTGTA------------------------------------------TG--T-----------------------------------------------------GTGCGTGT--------GT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19100.1010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
..................................................................................................................................................TG--------T-GTGTA------------------------------------------TG--T-----------------------------------------------------GTGCGTGT--------G...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20110.0910000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100
.............................................................................................................................................................................................................TG--T-----------------------------------------------------GTGCGTGT--------GTTGTGTG-----------------------T................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20160.0610000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................GTGTGTGTG------------TGCTTGTG--------T-GT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20160.0610000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
ATT------------------------------TTGCTTGCAAAAGAACGCATGCAAAAATAATTCAACAGATAATAACAGAGGTG------------------------------TGTGTGGGT----------------------GTAT--ATGTG----------------------------------------------------------------------------------------------------------TGTGTGT--------GTG-TGTG------------C-------CACAAGTCCATTCATAAACTCTGTCTACACGG-CAAAGAAAAACGTG--------------------------------------------------------CCCTT-------------------------------------------------------------------------------------------------------------------------CTGGCA--------------------------------TCGAAATAT----------------------------------------TCATA-----T------------------ACATG------------------------------------------------------------------------------------------------------------------------------C---G------------------------AGTGATTCTTTTTTTTTC----------TGG------------TG-CTCCTGCT---CT--C--------ACGACTAATGCTAATCCCTGT----GTTCTGCT-------CTCT--C--TTTTTT----------TGCGA-------------------------------------T--------------------------------------------CC--TA-------------CGCGGTGA--TGGTGATGTT---------G--------------------------GTGATCCT-------------GCAGGACATAATGTGCCAACAAAAGCAACGAGCAACGGGACCATGTGCGCCAA----T-------------------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
............................................................................AACAGAGGTG------------------------------TGTGTGGGT----------------------G...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000000000100000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C--------ACGACTAATGCTAATCCC...................................................................................................................................................................................................................................................................................................................1911.00110000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAAAAGCAACGAGCAACGGGACCATG................................2711.00100000000000001000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCCAACAAAAGCAACGAGCAACGGGACCA..................................3011.00100000000000001000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T----------TGCGA-------------------------------------T--------------------------------------------CC--TA-------------CGTA......................................................................................................................................................15200.25500000005000000000
droSec2
ATT------------------------------TTGCTTGCAAAAGAACGCATGCCAAAATAATTCAACAGATAATAACAGAGGTG------------------------------TGTGTGGGT----------------------GTAT--ATATA-----------------------------------------------TAT-A-----------------------------------------------------GTATGTGT--------GTG-TGTG------------C-------CACATGTCCATTCATAAACTCTGTCTACACGG-CAAAGAAAAACGTG--------------------------------------------------------CCCTT-------------------------------------------------------------------------------------------------------------------------CTGGCA--------------------------------TCGAAATAT----------------------------------------TCATA-----T------------------ATATG------------------------------------------------------------------------------------------------------------------------------C---G------------------------AGTGATTCTT-TTTTTTC----------TGG------------TG-CTCCTGCT---CT--C--------ACGACTTATGCTAATCCCTGT----GTTCTGCT-------CTCT--C--TTTTTT----------TGCGA-------------------------------------T--------------------------------------------CC--TA-------------CGCGGTGA--TGGTGATGTT---------G--------------------------ATGATCCT-------------GCAGGACATAATGTGCCAACAAAAGCAACGAGCAACGGGACCATGTGCGCCAA----T-------------------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACGGGACCATGTGCGCCA.........................2111.0010001
droYak3
ATT------------------------------TTGCTTGCAAAAGAACGCATGCAAAAATAATTCAACAGATAATAACAGAGGTG------------------------------TGTGTCTGTGTG------------T----GTGTGCG--GGTG-----------------------------------------------TATCC-----------------------------------------------------GTATGTGT--------ATG-TGTG------------T-------CACAAGTCCATTCATAAACTCTGTCTACACGG-AAAAGAAAAACGTG--------------------------------------------------------CC---------ATATAC------------------------------------------------------------------------------------------------------TTGCTGTGTGATATA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGTGATTCTTTTTTTTTC----------TGG------------TG-CTCCTGCT-------C--------ACGACTTATGCTAATTCATGT----GTTCTGCT-------CTCT--GTCTTTTTTT---------TGCGA-------------------------------------T--------------------------------------------CC--TT-------------TGCGGTGA--TGGTGATGATGATGATGATG--------------------------GTGATCCT-------------GCAGGACATAATGTGCCAACAAAAGCAACGAGCAACGGGACCATGTGCGCCAA----T-------------------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
........................................CAAAAGAACGCATGCAAAAAT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.00200000020000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACGGGACCATGTGCGCC..........................2011.00100100000000
..............................................................................................................................TG------------T----GTGTGCG--GGTG-----------------------------------------------TATCC-----------------------------------------------------GTATG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00101000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGATGATGATG--------------------------GTGATCCT-------------GC...........................................................................2111.00101000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAACGGGACCATGTGCGCCA.........................2211.00100001000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATGCTAATTCATGT----GTTCTGCT-------CTCT--G......................................................................................................................................................................................................................................................................................2811.00101000000000
droEre2
ATT------------------------------TTGCTTGCAAAAGAACGCATGCAAAAATAATTCAACAGATAATAACAGAGGTG------------------------------TGTGTGTGT----------------------GTGCG--GGTG----------------------------------------------------------------------------------------------------------CATGTGT--------GTG-TGTG------------T-------CGCCAGTCCATTCATAAACTCTGTCTACACGG-AAAAGAAAAACGTG--------------------------------------------------------CCTGT-------------------------------------------------------------------------------------------------------------------------CTGGCA--------------------------------TCGGAATA----------------------------------------------TCAAATAC---------CAAATGTCTATG------------------------------------------------------------------------------------------------------------------------------C-------------------------------GACTCTT-TTTTTTC----------CAG------------TG-CTCCT----AACT--C--------ACGATTCTTGCTAATCCATGT----GTTCTGCT-------CTCT--C--TTTTTTT-T----AT---CGA-------------------------------------T--------------------------------------------GC--CC-------------CGCGGTGA--TGGTGATGATGGTCACGATG--------------------------GCGATCCT-------------GCAGGACATAATGTGCCAACAAAAGCAACGAGCAACGGGACCATGTGCGCCAA----T-------------------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAAAAGCAACGAGCAAC.........................................2011.0011000000
.................................................................CAACAGATAATAACAGAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000010
....................................................................................................................................................................................................................................................................................................................................................AAAAGAAAAACGTG--------------------------------------------------------CCTGT-------------------------------------------------------------------------------------------------------------------------CTGGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010100000
dp5
ATT------------------------------TTGCTTGCAAAAAAACGCATGCAAAAATAATACAACAGATAAT---AGAGGTG------------------------------TGTGTGTTC-TC------------T------GTGCG--AGA-----------------G------------------------------------GGAGAGTCTTTATCAATGATATTATTACCAAAAAAGAATATATACATATACAGTATTTGGGACACTTGGTG-GGGGGAG------ACGTTGCGA---------------------T-----------G-----------CGACGAATTGGCAATTATCAAGTTCGCCGCGATGTCTAGTGCTTATCTGCGACACAGGAGTGTTCGACACGAT----------------------------------------------------------------------------------------------------------------------AC------------------------------------------------------------------------------------------------------GAA----A----CGATTCGAT----------------------------G------------------------CGAATGATAGATATACCCATGTA-----------------------------------------C---A-----TA-----------------------TCTT-CTTCTTT----------TTG---T---TCTCGTG-C------T-A------------ACA--CCCAATGCTAATCCATGTGTTTGATCTGTT--------TCT--C--CTATC---T----ATCGGTGAT-------------------------------CCC----------------------------------------------------TA------------CAC-----------------------------------------------------G-TGCCCT-------------ACAGGACATAATGTGCCAACAAAAGCAGCGAACAACGGGACAATGTGCGCCAA----T-------------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.......................................................................................................................................................................................................................................................................GTATTTGGGACACTTGGTG-GG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAAAAGCAGCGAACAACGG.......................................2211.0010100000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAGCAGCGAACAACGG.......................................1811.0010100000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCGAACAACGGGACAATGTGCGCC..........................2511.0010100000000
droPer2
TTC------------------------------TT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTGTTC----------TCG------------TG-C------T-A------------ACA--CCCAATGCTAATCCATGTGTTTGATCTGTT--------TCT--C--CTATC---T----ATCGGTGAT-------------------------------CCC----------------------------------------------------TA------------CAC-----------------------------------------------------G-TGCCTT-------------ACAGGACATAATGTGCCAACAAAAGCAGCGAACAACGGGACAATGTGCGCCAA----T-------------------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGAACAACGGGACAATGTG..............................2011.001001000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATAATGTGCCAACAAAAGCAGCG...............................................2411.001010000
droWil2
ATGCAAAAGTATTACAGATATATTCCAAGCGAGTGGTTTGTGTATGTGTGTGTG--------------------------------------------------------------------TGTGTG------------T-------------------------GTGTGTGTGTGTG--TGTGTGTGTGTGTGTGTGTGTGTGTG--TGTGTGT-------------------------------------------------GTGTGT--------GTG-TGTGAGC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGTATGTATGTAGCCAATTT---------------------------------------------------CCATCTCAT----------------------------GTAAGCTCCACTT---TGGTTTATGGCTATTGC-----GTTT--------------------------------------------T--T---G--CCCCCTTTTTTTCAGC----------------------------------TGT-------TTGTGTG-C------GAAATC--G--------AAGTTTTATGCTAATTTCTAT----TTTCTCAT-------TTCT--C--TTTTTCTCTCTCTATCTCTTAT-------------------------------TCG----------------------------------------------------TA------------T---------------------------------------------------------------------------------------------------------------------------CTCTAT----C-------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
...........................................................................................................................................................................TGTGTGTG--TGTGTGTGTGTGTGTGTG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.6513000013
...............................................................................................................................G------------T-------------------------GTGTGTGTGTGTG--TGTGTGTGTG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.20404000
..............................................................................................................................................................................................GTGTGTGTGTGTGTGTG--T.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.15300003
..........................................TATGTGTGTGTG--------------------------------------------------------------------TGTGTG------------T-------------------------.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.05101000
...........................................................................................................................GTGTG------------T-------------------------GTGTGTGTGTGTG--T.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.05100010
droVir3
GTG------------------------------T-GTGTGT----------------------------------------------------------------------------------CTGTG------------T----GTG--------T-GTGTATGTGTGTGTGTGTGTG--TGTGTGTGTGTGTGTGTGTGTGTGTG--TGTGTGT-------------------------------------------------GTTTGT--------ATG-TGTG---------------------------------------------------------------------------------------------------------------------------CCTTT-------------------------------------------------------------------------------------------------------------------------GTCTTA--------------------------------TCTTGTCTC----------------------------------------TCACA-----T------------------CTGC----------------------------------------------------------------AGA------------TTGCGTTGTCAT----TTTCGTT-----------------------------------------------------------------TTCGTTT----------TGA---GTGC-----TT-CTCTTGCA-------C--------ACGCTT--------TCTCTC------------TC-----TCTCT--C--TCTCTCTCTCT----CTCTG-TCTCTGTC-----TCACGCTAGAC--TGTTTT--------------------------------------------------------------------------------GCTTATC------------------------------------------------------------------------------------------------------TTTGTTTTTA----T-------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
..............................................................................................................................................................................GTGTG--TGTGTGTGTGTGTGTGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22202.00400000000000000000000000000000000000000000000000000000000000000400
........................................................................................................................................................................................................GTGTGTG--TGTGTGT-------------------------------------------------GTTTGT--------ATG-TGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26100.101000000000000000000000000000000000100000000000000000000000000000
.................................................................................................................................................................................................................TGTGTGT-------------------------------------------------GTTTGT--------ATG-TGTG---------------------------------------------------------------------------------------------------------------------------.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.102000000000000000000000000000000000000000200000000000000000000000
......................................................................................................................................................................................................GTGTGTGTG--TGTGTGT-------------------------------------------------GTTTG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051000000000000000000000000000000000000000000000000000000000001000
............................................................................................................................................................T-GTGTATGTGTGTGTGTGTGTG--TGTGTGTGTG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................32200.051000000000000000000000000000000000000000000000000000000000010000
............................................................................................................................TGTG------------T----GTG--------T-GTGTATGTGT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.051000000000000000000000000000000000000000000000000000000000000010
.....................................................................................................................................................................................................TGTGTGTGTG--TGTGTGT-------------------------------------------------GTTTG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.051000000010000000000000000000000000000000000000000000000000000000
droMoj3
GTG------------------------------T-GTGTGT----------------------------------------------------------------------------------GTGTG------------T----GTG--------T-GTGTGTGTGTGTGTGTGTGTG--TGTGTGTGTGTGTGTGTGTGTGTGTG--TGTGTGT-------------------------------------------------GTGTGT--------GTG-TGTGTGCTCGCGTGCATTACAA---------------------AGCGTCAGCGTTG-GTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGCAACGATGTCGACTC-----AAG---------TCTTAAGATAAGATTAA--AATGAAACCCAAC---TGAATCGCAGTCAAT---GA-------------------------------------------------------------------------------------------------------------------------------------------------------------------T--TCTATCT----CTC----TC-----CCTCT--C--TCTCTCTCTCC----CTGTG-TGTGTGTG-------------------------------------------------------------------------------------------------------TGCTGGTGTTCG---TTATCT--AT-----------GAAATCCATTGA---------------------------CAATGGGCCA------------GGCAATGGCTTTCT----GCTGAGCAATGCAAACAGCAGCAAAAAAASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads
droGri2
TGT------------------------------ATGTA------------------------------------------------------------------------------------CGTGTG------------T----GTGTACATATGTA-----------------------------------------------TG-----------------------------------------------------------TACGT--------ATG-TGTA------------TCGAAAATAGCCACACTGTGCAGAAATTTTGTTTATCTGT-TTGAAAAAG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACACTAATT---TAGCTAGTCGCCGAT---GA-----------------------------------------------------T---A---TCCCTATCTTTAAACAGTGTGTGTGCTTTTT-TTTTTTTTTTTTTTTTTTTTTGATAAT-----TT-TTGTTGT-----------------------AACGAGAATTTTTTT----G-----AT-------TT-T--G--TTATTGT----------TTGA-------------------------------------ACTAATCTGTGATTGCATTTTGTTCTGTGATTTGCCACGTGCGACTC--TTA------------AAT-----------------------------------------------------GATACCGT-------------GTAGGACATAATGTGCCAACAAAAGCAACGAGCAATGGGACAATGTGTGCCAA----T-------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/18/2015 at 02:18 AM