ID:

dan_1523

 Coordinate:

scaffold_13248:1834749-1834899 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-17.8 -17.7 -17.5

Flybase annnotation

exon [dana_GLEANR_6513:3]; CDS [Dana\GF22553-cds]; intron [Dana\GF22553-in]

Repeatable elements

NameClassFamilyStrand
(CAAAAA)nSimple_repeatSimple_repeat+
mature
  1. scaffold_12903:408570-408588 +
  2. scaffold_12911:3108933-3108951 +
  3. scaffold_12911:4330469-4330487 +
  4. scaffold_12929:364798-364816 +
  5. scaffold_12929:787635-787653 +
  6. scaffold_12929:2450395-2450413 +
  7. scaffold_12943:3818435-3818453 +
  8. scaffold_12966:66450-66468 +
  9. scaffold_13117:3671915-3671933 +
  10. scaffold_13117:5159608-5159626 +
  11. scaffold_13123:2-20 +
  12. dan_1523  scaffold_13248:1834865-1834883 +
  13. scaffold_13250:3415924-3415942 +
  14. scaffold_13266:16938600-16938618 +
  15. scaffold_13337:8917557-8917575 +
  16. scaffold_13337:18308091-18308109 +
  17. scaffold_13340:6336676-6336694 +
  18. scaffold_13340:8056089-8056107 +
  19. scaffold_13340:12827394-12827412 +
  20. scaffold_13417:2694687-2694705 +
star

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
GACATGTACTACTTCGAGGTGATGTTCGGCGTGGTCGTCGCCTACGTATTGTATCCTTTTCCAAACCAACAAAAAAAAAATCCAAAAATCAGCTGATCTGCATAGATTATATAAGAAGGAGGGGTGGGGTGTTCTAGTGTCGGTAACCTTGACCTGATTACCAAAAAAAAAAACAAAAAACAAAAATGAAAAGAAAAACGAGGAAAAGAACCGGCAGAGAAAACTATTCACGGTCGGCGTTGAACATTTGT
**************************************************..........(((..((.............(((..........((((((....))))))........)))))..)))((((.((.((.(((((.....))))))))).)))).......................................************************************************** 		Read size # Mismatch Hit Count Total Norm Total M058
embryo
 V105
male body		 M044
female body
 V055
head
 V039
embryo
................................GGTCGTCGCCTACGTTTTGC....................................................................................................................................................................................................... 20 2 1 1.00 1 0 0 1 0 0
GACATGTACTACTTCGTGGAGTTGT.................................................................................................................................................................................................................................. 25 3 1 1.00 1 0 0 1 0 0
...............................................................................................................................................................................................AGAAAAACGAGGAAAAGAACCGGCAGA................................. 27 0 1 1.00 1 1 0 0 0 0
........CTACTTCGAGGTGATGTTCGGCGC........................................................................................................................................................................................................................... 24 1 1 1.00 1 1 0 0 0 0
..................................................................................................................................................................................AACAAAAATGCCAAGAAAAACGA.................................................. 23 2 1 1.00 1 1 0 0 0 0
...........................................................................................................................................................................................GAAAAGAAAGACGAGGAAAAGAA......................................... 23 1 1 1.00 1 0 1 0 0 0
............................................................................................................................................................................................AAAAGAAAGACGAGGAAAAG........................................... 20 1 1 1.00 1 0 1 0 0 0
........CTACTTCGAGGTGATGTTCGGCGT........................................................................................................................................................................................................................... 24 0 1 1.00 1 0 1 0 0 0
.......ATTACTTCGAGGTGATGTTCGGCGT........................................................................................................................................................................................................................... 25 1 1 1.00 1 1 0 0 0 0
.........................................................................................................................................................................................ATGAAAAGTAAACCGAGGAAAA............................................ 22 2 1 1.00 1 0 1 0 0 0
............................................................................................................................................................................................AAAAGAAAGACGTGGAAAAGAA......................................... 22 2 2 0.50 1 0 1 0 0 0
.ACATGTACTACTTCGTGGAGTTG................................................................................................................................................................................................................................... 23 3 2 0.50 1 0 0 1 0 0
..CATGTACTACTTCGTGGAGTTGT.................................................................................................................................................................................................................................. 23 3 2 0.50 1 0 0 1 0 0
.......................................................................................................................................................................................AAAAGAAAAGAAAAACGAGGA............................................... 21 1 3 0.33 1 1 0 0 0 0
...............................................................................................................................................................................................AGAAAGACGAGGAAAAGAAG........................................ 20 2 4 0.25 1 0 1 0 0 0
........................................................................................................................................................................................AACGCAAAGAAAAACGAGGAAA............................................. 22 2 5 0.20 1 1 0 0 0 0
..CATGTACTACTTCGTGGAGT..................................................................................................................................................................................................................................... 20 3 5 0.20 1 0 1 0 0 0
............................................................................................................................................................................................AAAAGAAAAACCAGTAAAAGAA......................................... 22 2 5 0.20 1 1 0 0 0 0
....................................................................................................................................................TTTACTTGGTTACCAAAAAAAAA................................................................................ 23 3 6 0.17 1 1 0 0 0 0
....TGTACTACTTCGTGGAGTTGT.................................................................................................................................................................................................................................. 21 3 6 0.17 1 0 1 0 0 0
............................................................................................................................................................................................................AAAGAACCGCAAGAGATAACT.......................... 21 3 7 0.14 1 0 0 0 1 0
.................................................................................................................ATAGGGAGGGGTGGGGGGTTC..................................................................................................................... 21 3 8 0.13 1 0 0 0 1 0
.............................................................................................................................................................................................GAAGAAAAACGAGGAGAAGA.......................................... 20 2 8 0.13 1 0 0 1 0 0
.........................................................................................................................................................................................ATGAAAAGAAAAAGGAGAAATAGA.......................................... 24 3 8 0.13 1 0 1 0 0 0
........................................................................................................................................................................................TATAAAAAGAAAAACGAGGAA.............................................. 21 2 9 0.11 1 1 0 0 0 0
......................................................................................................................................................GACCTGGATACCAAACAAAAA................................................................................ 21 3 10 0.10 1 1 0 0 0 0
............................................................CCAAACCAACAAACAAAAACACCA....................................................................................................................................................................... 24 3 12 0.08 1 1 0 0 0 0
...........................................................................................................................................................................AACAAAAAACAGAAAGGAAAAGA......................................................... 23 2 13 0.08 1 1 0 0 0 0
..............................................................................................................................................................................................AAGAAAAAAGAGGAAAAGA.......................................... 19 1 13 0.08 1 0 1 0 0 0
............................................................................................................................................................................................AACAGTAAAATGAGGAAAAGAA......................................... 22 3 13 0.08 1 0 1 0 0 0
...........................................................................................................................................................................................................AAAAGAACGGGCAAAGAAA............................. 19 2 15 0.07 1 0 0 0 0 1
......................................................................................................................................................................................AAAAGGAAAAGAAAAAAGAGGA............................................... 22 2 16 0.06 1 1 0 0 0 0
.............................................................CAAACCAACAAAAAAAACACC......................................................................................................................................................................... 21 2 17 0.06 1 1 0 0 0 0
.................................................................................................................................................................................................AAAAACGAGGAAAAGACCA....................................... 19 2 18 0.06 1 1 0 0 0 0
....................................................................................................................ACGAGGGGAGGGGTGTTCA.................................................................................................................... 19 3 20 0.05 1 0 0 0 1 0
...............................................................................................................................................................ACCAAAAAAAAGAACAAAA......................................................................... 19 1 20 0.05 1 1 0 0 0 0
......................................................................................................................................................................AAAAAAACAAAAAACAAAA.................................................................. 19 0 20 0.05 1 1 0 0 0 0
.....................................................................................................ATAGATTATACATGAAGGC................................................................................................................................... 19 3 20 0.05 1 1 0 0 0 0
...............................................................................................................................................................................................AGACAAACGAGAAAAAGA.......................................... 18 2 20 0.05 1 0 0 0 0 1
....................................................................................................................................................................AAAAAAAAACAAAAGACAAAA.................................................................. 21 1 20 0.05 1 1 0 0 0 0
..............................................................................................................................................................................GAAAAACAAAAATGAAAA........................................................... 18 1 20 0.05 1 1 0 0 0 0
.....................................................................................................ATAGATAAAAAAAGAAGGAGGG................................................................................................................................ 22 3 20 0.05 1 0 1 0 0 0
..............................................................................................................ATCAGAGGGAGGGGTGAGG.......................................................................................................................... 19 3 20 0.05 1 0 0 1 0 0
...............................................................AACCAACAAAAGAAAAAACC........................................................................................................................................................................ 20 2 20 0.05 1 1 0 0 0 0
.............................................................................................................................................................................................AAAGAAAAAAGAGGAAAAG........................................... 19 1 20 0.05 1 0 1 0 0 0
..............................................................................................................................................................................................AAGAAGAAGGAGGAAAAGA.......................................... 19 2 20 0.05 1 0 1 0 0 0
...................................................................................................................................................................AAAAAAAAAACAAAAAACAAAA.................................................................. 22 0 20 0.05 1 1 0 0 0 0
.........................................................................................................................................................................AAAACAAAAAACAAAAAGGAA............................................................. 21 1 20 0.05 1 1 0 0 0 0
...............................................................................................................................................................................................AGAAAAACGAGGACCAGACC........................................ 20 3 20 0.05 1 1 0 0 0 0
...................................................................................................................................................................AAAAAAAAAACAAAAGACAAA................................................................... 21 1 20 0.05 1 1 0 0 0 0
.....................................................................................................................................................................AAAAAAAACAAAAAACAAAA.................................................................. 20 0 20 0.05 1 1 0 0 0 0

Anti-sense strand reads

CTGTACATGATGAAGCTCCACTACAAGCCGCACCAGCAGCGGATGCATAACATAGGAAAAGGTTTGGTTGTTTTTTTTTTAGGTTTTTAGTCGACTAGACGTATCTAATATATTCTTCCTCCCCACCCCACAAGATCACAGCCATTGGAACTGGACTAATGGTTTTTTTTTTTGTTTTTTGTTTTTACTTTTCTTTTTGCTCCTTTTCTTGGCCGTCTCTTTTGATAAGTGCCAGCCGCAACTTGTAAACA
**************************************************..........(((..((.............(((..........((((((....))))))........)))))..)))((((.((.((.(((((.....))))))))).)))).......................................************************************************** 		Read size # Mismatch Hit Count Total Norm Total M058
embryo
 V039
embryo
 V055
head
 V106
head
.............................................................GTTTGGATTTTTTTCTTTTAGGTTTT.................................................................................................................................................................... 26 3 5 0.20 1 0 1 0 0
.............................................................................................................................................CCACTGGAACTGGACTAT............................................................................................ 18 2 7 0.14 1 1 0 0 0
..........................................................................................................................CCACCCCACACGATCACAACA............................................................................................................ 21 3 7 0.14 1 1 0 0 0
.............................................................................................................................CCCCACCACAACACAGCCAT.......................................................................................................... 20 3 15 0.07 1 1 0 0 0
......................................................................................................................CTCCCCACCACACATGTTC.................................................................................................................. 19 3 20 0.05 1 0 0 1 0
.................CCACTAGAAGCCACACAAG....................................................................................................................................................................................................................... 19 3 20 0.05 1 0 0 0 1
..............................CACCACCAGAGGAAGCATAA......................................................................................................................................................................................................... 20 3 20 0.05 1 1 0 0 0
.....................................................................................................................................................................................................................CGACTCTTTTGGTAAGGGC................... 19 3 20 0.05 1 0 0 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droAna3 scaffold_13248:1834699-1834949 + dan_1523 GACATGTACTACTTCGAGGTGATGTTCGGCGTGGTCGTCGCCTACGTATTGTATCCTTTTC----------------------CAAACCAA-----CAA------------------------AAAAAA-----------------------------------AATCCA---------------------------A-------------AA---------ATCAGCTG-----ATCTGCATAGATTATATAAGAAGGAGG--------G--GTGGGGTGTTCTAGTGT--------CGGTAACCTTGACCTGATTACCAAAA-AAAAAAACAAAAAACAAAAATGAAAAGAAAAACGAGGAAAAGA--ACCGG-CAGA--GA-AAACTATTCACGGTCGGCGTTGAACATTTG----T
droBip1 scf7180000395544:27211-27456 - GACATGTACTACTTCGAGGTTATGTTCGGCGTGGTCGTCGCTTACGTATTGTATCCTTTTA----------------------CAAAACAA--AAATAT------------------------CCAAAATCC-------------------------------------------------AAAA-AAT-CAGTTGAAATT----------AA---------GTCCGGAAC--CAG-----ATCGATTAGATAAGAGT---GGGGGGGGTGTTCTATAGTGTT---TTGT--TTGGATCGGTAACCTTGACCCGATTACCAAAA-AAA-----------------------------CGAGGAAAAGA--GCCGA-CGAA--GA-AAACTATTCACGGCCGGCGTCGGACATTGG-----
droKik1 scf7180000302592:1546623-1546857 + GACATGTACTACTTCGAAGTGATGTTCGGCGTCGTTGTCGCCTACGTATTGTATCCTTTAC----------------------CAACGCAA----ACACCTACAGCT--ATTAGC-----------------------TACCGAAAATCG----------AAAGTCT-------------------------------------------AGAGTC-TAGGAATCGGCC------------ACCGATTAGATAA------------------------GAATTCTATTGT--TCGA--CGTTAACCTTGACCCGATTACCCAAA-AAA--------------------------AGGCAGACAAACGGA--C-AGACAGC--AC-AAACTATTCACGGCCGGCC--GTACATTTG-----
droFic1 scf7180000454077:680128-680375 + GACATGTACTACTTTGAAGTGATGTTCGGCGTTGTGGTCGCCTACGTATTGTATCCTTTTACAAA---------AATCATATACCAAATCA--AAA--------------------GCCAAGA------------------------TCAAA-------------ATTGAAGGAG--CATAC---AAATAGGTATAAA-------------AA---------ATCGGCA------------ACCGATTAGATAAG------C--------G--TTAAAGAGTTCTTTCGT--CAAG--CGGTGACCTTGACCCGATTACCAAAA-AAG------------------------------------AAGG--CCTCG-CACT--AC-AAACTATTCATGGTCGCGC--GTACAAACGTGCGT
droEle1 scf7180000491001:216247-216457 + GACATGTACTACTTCGAAGTGATGTTCGGCGTGGTCGTCGCCTACGTATTGTATCCTTTTT----------------------TGA------------------------------------------G---------TATCAAAAATCA----------------------------------------AGTAAACA-------------AA---------ATCGGTTAA----G-----ACCGATTAGATAAG------C--------GCCCAATAGAGTTCTATTGT--CCGGCGCGGTGACCTTGACCCGATTACCAAAAAAAG------------------------------------AAGG--CCCCG-CACA--AA-AAACTATTCACGGTCCGTC--CAACGATCG-----
droRho1 scf7180000779333:745166-745400 - GACATGTACTATTTCGAAGTGATGTTCGGCGTGGTGGTCGCCTACGTATTGTATCCTTTTT---------------------GCCATATCA--AAA--------------------ATCAAGA---------ATTTGGTATCAAAAATCA----------------------------------------AGTATCAA-------------AA---------ATCGGTTA-----G-----ACCGATTAGATTAG------C--------G--TCAAAGAGTTCTTTTGT--CCGGCACGGTGACCTTGACCCGAATACCAAAA-AAG------------------------------------AAGGTCCCCCG-CACA--AC-AAACTATTCACGGTCGGTC--GTATGATCGTGTGT
droBia1 scf7180000301760:3536106-3536338 - GACATGTACTACTTCGAGGTGATGTTCGGCGTGGTGGTCGCCTACGTATTGTATCCTTTTA----------------------TCAAATGG--AAACACCCATGCCCAGATCAGCAACCAAA----------------------------------------------------------------------------ACCAGAGGTACCAAGGTG---------CCAAAG--GAG-----ACCGATTAGATAAG------C--------C--CCACAGCGCTCTGTTGT--CCGG--CGGTGACCTTGACCCGATTACCGAAA-AAG------------------------------------CAGA--CC-CG-CACC--CC-AAACTATTCATGGTCAGTC--GCACATTCG-----
droTak1 scf7180000415210:510703-510969 + GATATGTACTACTTTGAAGTGATGTTCGGCGTGGTGGTCGCCTACGTATTGTATCCTTTAGCAAATAATAATAGAA-------CCATACAA--AAA--------------------TTCAAGA---------AT------CCAAAAGTCAAG-------------AATCAAGAAT--CATA-----------------ATCACAGGTATGAGAGTTTTAAGAATTGGCCAC--C-------ACCGATTAGATAAG------T--------C--TTCGAAAGTTCTATTGT--CCGG--CGGTGACCTTGACCCGATTACCGAAAAAAG------------------------------------AAGA--CCCCG-CACC--ACTAAACTATTCACGGTCAGTC--GTACAATCG-----
droEug1 scf7180000409271:589042-589254 - GATATGTACTACTTTGAAGTGATGTTTGGCGTGGTGGTCGCCTACGTATTGTATCCTTTTT----------------------TATATAAA--AAA-------------------------------AAACC-------------------------------------------------CAAATACC-CATATCA-------------------------ATAGAC-------A-----TACGATTAGGTAAG------C--------C--TTAAAGAGTTCTATTGC--CCGA--AAGTGACCTTGACCCGATTACCAAAA-ACT------------------------------------AAGA--CCCCG-CACC--AC-AAACTATTCACGGTCAGTC--GTACAATCGTGTGC
dm3 chrX:17519388-17519612 - GACATGTACTACTTCGAAGTGATGTTTGGCGTCGTGGTCGCCTACGTATTGTATCCTTTTA----------------------CCAAATCC--AAAAGTACAAAT------------------CCAAAGTAC-------------------------------------------------GAAA-AAT-GGCATGAA-------------AA---------GTCGGTCGC--C-G-----ACTGATTAGATAA-------------------TAAAAGAGTTCTATCGT--TCGG--CGGTGACCTTGACCCGATTACCAAAA-ATG------------------------------------AAGA--CCCCGCCACT--AC-AAACTATTCACGGTCAGTC--GGGCGTTTG-----
droSim2 x:16632388-16632605 - GACATGTACTACTTCGAAGTGATGTTCGGCGTGGTGGTCGCCTACGTATTGTATCCTTTTA----------------------CCAAATCC--AAATAG------------------------CCAAAGTAC-------------------------------------------------GAAA-TAT-GGCATGAA-------------AA---------GTCGGTCAC--C-G-----ACTGATTAGATAG-------------------TGAAAGAGTTCTATTGT--CCGG--CGGTGACCTTGACCCGATTACCAAA--ATG------------------------------------AAGA--CCCCGCCACC--AC-AAACTATTCACGGTCAGTC--GGGCGTTTG-----
droSec2 scaffold_17:1362111-1362319 - GACATGTACTACTTCGAAGTGATGTTCGGCGTGGTGGTCGCCTACGTATTGTATCCTTTTA----------------------CCAAATCC--AAATAG------------------------CCAAAGTAC-------------------------------------------------GAAA-TAT-GGTATGAA-------------AA---------GTCGGTCAC--C-G-----ACTGATTAGATAG-------------------TGAAAGAGTTCTATTGT--CCGG--CGGTGACCTTGACCCGATTACCAAAA-ATG------------------------------------AAGA--CCCCGCCACC--AC-AAACTATTCACGGTCACC-----------------
droYak3 X:16146339-16146561 - GACATGTACTACTTCGAAGTGATGTTCGGCGTGGTGGTCGCCTATGTATTGTATCCTTTTA----------------------CCAAATCT--GA----------------------------TCAAAGCA--------------------------------------------TTGCTCTAAA-AAC-GGCATCAA-------------AA---------GTCGGTCACACC-G-----ACTGATTAGATAG-------------------TGAAAGAGTTCTATTGC--CCGG--CGGTGACCTTGACCCGATTACCAAAA-ATG------------------------------------AGCA--CCGCG-CACC--AC-AAACTATTCACGGTCAGTCGTGTGCGTTTG-----
droEre2 scaffold_4690:7855422-7855641 - GACATGTACTACTTCGAAGTGATGTTCGGCGTGGTGGTCGCCTATGTATTGTATCCTTTTA----------------------CCAAATCTGCACA-AG------------------------CTAGAGACC-------------------------------------------------GAAAGAAC-GGTATCAA-------------AA---------GTCGGTCAC--C-G-----ACTGATTAGATAG-------------------TGAAAGAGTTCTATTCT--CCGG--CAGTGACCTTGACCCGATTACCAAAA-ACG------------------------------------AAGA--CCCCG-CACC--AC-AAACTATTCACGGTCAGTC--GTGCGATTG-----
dp5 XL_group1e:4454250-4454533 + GATATGTATTACTTTGAAGTGATGTTCGGCGTAGTTGTCGCCTATGTATTGTATCCTTTTT----------------------TCAAACAC--ACACATACACACACAAA---------------------------------------------TCAGAAAAATCTTCAAAGAGATCTTCT---GAACGGGCAATAC-------------TA---------ATCGGGCACACGTT-----TCCGATTAGATAA-------------------T---AGATTTCTGCTGCTGTCAG--CAATAACCTTGACCTGATTACTCAAA-ATAGTCGCAGT-AGTGCTGTTGCCCCCAAAAACAGACAGAATGA--C-CGCCATCCGAC--TACTATTCACGGTCAACC--GTACATTTG----T
droPer2 scaffold_17:1397180-1397463 + GATATGTATTACTTTGAAGTGATGTTCGGCGTAGTTGTCGCCTATGTATTGTATCCTTTTT----------------------GCAAACAC--ACACATACACACACAAA---------------------------------------------TCAGAAAAATCTTCAAAGAGATCTTCT---GAACGGGCAATAC-------------TA---------ATCGGGCACACGTT-----TCCGATTAGATAA-------------------T---AGATTTCTGCTGCTGTCAG--CAATAACCTTGACCTGATTACTCAAA-ATAGTCGCAGT-AGTGCTGTTGCCCCCAAAAACAGACAGAATGA--C-CGCCATCCGAC--TACTATTCACGGTCAACC--GTACATTTG----T
droWil2 scf2_1100000004909:10189588-10189684 - GACATGTATTATTTTGAAGTCATGTTTGGAGTGGTCGTCGCCTACGTATTGTATCCTTTTC----------------------TACAACAA--CAACAA------------------------GAAAAA---CAT-------A---------A-GCAAC---------------------------------------------------------------------AA-----ATCT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droVir3 scaffold_12970:5608666-5608760 + GACATGTATTATTTTGAAGTGATGTTCGGCGTTGTTGTCGCTTACGTATTGTATCCTTTTA----------------------ACATCAGC-----CAA------------------------GAAAAC---CAT-------A---------ACGAAAC---------------------------------------------------------------------TG-----ATCT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droMoj3 scaffold_6473:16053482-16053550 - GACATGTATTATTTTGAAGTGATGTTCGGCGTTGTTGTCGCCTATGTATTGTATCCTTTTC----------------------CAAAACAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droGri2 scaffold_15203:9770270-9770398 - GACATGTATTACTTTGAAGTGATGTTCGGCGTTGTTGTCGCCTACGTATTGTATCCTTTTC----------------------A--TATGC--AAACAA------------------------CAAAACA-----------------------------------ATT-------------GACG-CAT--GCATGTA--------------A---------ATTAGTTGC--A-G-----ACTACATAAATTG-------------------TGTGTGA--------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droAna3
GACATGTACTACTTCGAGGTGATGTTCGGCGTGGTCGTCGCCTACGTATTGTATCCTTTTC----------------------CAAACCAA-----CAA------------------------AAAAAA-----------------------------------AATCCA---------------------------A-------------AA---------ATCAGCTG-----ATCTGCATAGATTATATAAGAAGGAGG--------G--GTGGGGTGTTCTAGTGT--------CGGTAACCTTGACCTGATTACCAAAA-AAAAAAACAAAAAACAAAAATGAAAAGAAAAACGAGGAAAAGA--ACCGG-CAGA--GA-AAACTATTCACGGTCGGCGTTGAACATTTG----TSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
..............................................................................................................................................................................................................................................................................................................................................................AGAAAAACGAGGAAAAGA--ACCGG-CAGA--......................................2711.001010000
........CTACTTCGAGGTGATGTTCGGCGC....................................................................................................................................................................................................................................................................................................................................................................................................2411.001010000
........CTACTTCGAGGTGATGTTCGGCGT....................................................................................................................................................................................................................................................................................................................................................................................................2411.001000010
.....................................................................................................................................................................................................................................................................................................................................AAAAAAACAAAAAACAAAA............................................................................19200.051010000
.................................................................................................................................................................................................................................................................................................................................AAA-AAAAAAACAAAAAACAAAA............................................................................22200.051010000
...................................................................................................................................................................................................................................................................................................................................A-AAAAAAACAAAAAACAAAA............................................................................20200.051010000
droBip1
GACATGTACTACTTCGAGGTTATGTTCGGCGTGGTCGTCGCTTACGTATTGTATCCTTTTA----------------------CAAAACAA--AAATAT------------------------CCAAAATCC-------------------------------------------------AAAA-AAT-CAGTTGAAATT----------AA---------GTCCGGAAC--CAG-----ATCGATTAGATAAGAGT---GGGGGGGGTGTTCTATAGTGTT---TTGT--TTGGATCGGTAACCTTGACCCGATTACCAAAA-AAA-----------------------------CGAGGAAAAGA--GCCGA-CGAA--GA-AAACTATTCACGGCCGGCGTCGGACATTGG-----SizeHit CountTotal NormTotal
No Reads
droKik1
GACATGTACTACTTCGAAGTGATGTTCGGCGTCGTTGTCGCCTACGTATTGTATCCTTTAC----------------------CAACGCAA----ACACCTACAGCT--ATTAGC-----------------------TACCGAAAATCG----------AAAGTCT-------------------------------------------AGAGTC-TAGGAATCGGCC------------ACCGATTAGATAA------------------------GAATTCTATTGT--TCGA--CGTTAACCTTGACCCGATTACCCAAA-AAA--------------------------AGGCAGACAAACGGA--C-AGACAGC--AC-AAACTATTCACGGCCGGCC--GTACATTTG-----SizeHit CountTotal NormTotal
No Reads
droFic1
GACATGTACTACTTTGAAGTGATGTTCGGCGTTGTGGTCGCCTACGTATTGTATCCTTTTACAAA---------AATCATATACCAAATCA--AAA--------------------GCCAAGA------------------------TCAAA-------------ATTGAAGGAG--CATAC---AAATAGGTATAAA-------------AA---------ATCGGCA------------ACCGATTAGATAAG------C--------G--TTAAAGAGTTCTTTCGT--CAAG--CGGTGACCTTGACCCGATTACCAAAA-AAG------------------------------------AAGG--CCTCG-CACT--AC-AAACTATTCATGGTCGCGC--GTACAAACGTGCGTSizeHit CountTotal NormTotal
No Reads
droEle1
GACATGTACTACTTCGAAGTGATGTTCGGCGTGGTCGTCGCCTACGTATTGTATCCTTTTT----------------------TGA------------------------------------------G---------TATCAAAAATCA----------------------------------------AGTAAACA-------------AA---------ATCGGTTAA----G-----ACCGATTAGATAAG------C--------GCCCAATAGAGTTCTATTGT--CCGGCGCGGTGACCTTGACCCGATTACCAAAAAAAG------------------------------------AAGG--CCCCG-CACA--AA-AAACTATTCACGGTCCGTC--CAACGATCG-----SizeHit CountTotal NormTotal
No Reads
droRho1
GACATGTACTATTTCGAAGTGATGTTCGGCGTGGTGGTCGCCTACGTATTGTATCCTTTTT---------------------GCCATATCA--AAA--------------------ATCAAGA---------ATTTGGTATCAAAAATCA----------------------------------------AGTATCAA-------------AA---------ATCGGTTA-----G-----ACCGATTAGATTAG------C--------G--TCAAAGAGTTCTTTTGT--CCGGCACGGTGACCTTGACCCGAATACCAAAA-AAG------------------------------------AAGGTCCCCCG-CACA--AC-AAACTATTCACGGTCGGTC--GTATGATCGTGTGTSizeHit CountTotal NormTotal
No Reads
droBia1
GACATGTACTACTTCGAGGTGATGTTCGGCGTGGTGGTCGCCTACGTATTGTATCCTTTTA----------------------TCAAATGG--AAACACCCATGCCCAGATCAGCAACCAAA----------------------------------------------------------------------------ACCAGAGGTACCAAGGTG---------CCAAAG--GAG-----ACCGATTAGATAAG------C--------C--CCACAGCGCTCTGTTGT--CCGG--CGGTGACCTTGACCCGATTACCGAAA-AAG------------------------------------CAGA--CC-CG-CACC--CC-AAACTATTCATGGTCAGTC--GCACATTCG-----SizeHit CountTotal NormTotal
No Reads
droTak1
GATATGTACTACTTTGAAGTGATGTTCGGCGTGGTGGTCGCCTACGTATTGTATCCTTTAGCAAATAATAATAGAA-------CCATACAA--AAA--------------------TTCAAGA---------AT------CCAAAAGTCAAG-------------AATCAAGAAT--CATA-----------------ATCACAGGTATGAGAGTTTTAAGAATTGGCCAC--C-------ACCGATTAGATAAG------T--------C--TTCGAAAGTTCTATTGT--CCGG--CGGTGACCTTGACCCGATTACCGAAAAAAG------------------------------------AAGA--CCCCG-CACC--ACTAAACTATTCACGGTCAGTC--GTACAATCG-----SizeHit CountTotal NormTotal
No Reads
droEug1
GATATGTACTACTTTGAAGTGATGTTTGGCGTGGTGGTCGCCTACGTATTGTATCCTTTTT----------------------TATATAAA--AAA-------------------------------AAACC-------------------------------------------------CAAATACC-CATATCA-------------------------ATAGAC-------A-----TACGATTAGGTAAG------C--------C--TTAAAGAGTTCTATTGC--CCGA--AAGTGACCTTGACCCGATTACCAAAA-ACT------------------------------------AAGA--CCCCG-CACC--AC-AAACTATTCACGGTCAGTC--GTACAATCGTGTGCSizeHit CountTotal NormTotal
No Reads
dm3
GACATGTACTACTTCGAAGTGATGTTTGGCGTCGTGGTCGCCTACGTATTGTATCCTTTTA----------------------CCAAATCC--AAAAGTACAAAT------------------CCAAAGTAC-------------------------------------------------GAAA-AAT-GGCATGAA-------------AA---------GTCGGTCGC--C-G-----ACTGATTAGATAA-------------------TAAAAGAGTTCTATCGT--TCGG--CGGTGACCTTGACCCGATTACCAAAA-ATG------------------------------------AAGA--CCCCGCCACT--AC-AAACTATTCACGGTCAGTC--GGGCGTTTG-----SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.............TCGAAGTGATGTTTGGCGTCGTGGTC.............................................................................................................................................................................................................................................................................................................................................................................................26111.001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............TTCGAAGTGATGTTTGGCGTCGTGGTC.............................................................................................................................................................................................................................................................................................................................................................................................2714.0040000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000200000
.........TACTTCGAAGTGATGTTTGGCGTCGTG................................................................................................................................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000
........................................................................................TCC--AAAAGTACAAAT------------------CCAAAGTAC-------------------------------------------------GAAA-..........................................................................................................................................................................................................................................2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................GTGATGTTTGGCGTCGTGGTC.............................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
......................TGTTTGGCGTCGTGGTCGCCTACGTA....................................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.ACATGTACTACTTCGAAGTGA..............................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.........TACTTCGAAGTGATGTTTGGC......................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100
....................GATGTTTGGCGTCGTGGTCGC...........................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101000000000000000000000000
......TACTACTTCGAAGTGATGTTTGGCG.....................................................................................................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
.....................ATGTTTGGCGTCGTGGTC.............................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.................................................................................................................................................................................................................................................................................TAAAAGAGTTCTATCGT--TCGG--..........................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........CTACTTCGAAGTGATGTTTGGC......................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................AGTGATGTTTGGCGTCGTGGTC.............................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................GTTTGGCGTCGTGGTCGCCTACGT.....................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............GAAGTGATGTTTGGCGTCG..................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
...............GAAGTGATGTTTGGCGTCGTGGTCGC...........................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
....................................................................................................................................................................................................................................................................................AAGAGTTCTATCGT--TCGG--CGGT......................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
...........CTTCGAAGTGATGTTTGGCGT....................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
...................................................................................................ACAAAT------------------CCAAAGTAC-------------------------------------------------GAAA-AAT-GGCATG................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......TACTACTTCGAAGTGATGTTT.........................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........TACTTCGAAGTGATGTTTGGCGTCGTGG...............................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..CATGTACTACTTCGAAGT................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............TTCGAAGTGATGTTTGGCGTCGT.................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
GACATGTACTACTTCGAAGT................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
............................................................................................................................CAAAGTAC-------------------------------------------------GAAA-AAT-GGCATGAA-------------AA---------GTC...................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................GAGTTCTATCGT--TCGG--CGGTGACCTTGA..............................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................TGATGTTTGGCGTCGTGGTCGCCT.........................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000
...ATGTACTACTTCGAAGTGATG............................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....GTACTACTTCGAAGTGATGTTTGG.......................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.......................................................................................................................................................................................................................................................................................AGTTCTATCGT--TCGG--CGGTGACCTTT...............................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
........................TTTGGCGTCGTGGTCGCCTACGTA....................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....GTACTACTTCGAAGTGATGT...........................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000
............TTCGAAGTGATGTTTGGCGTCGTGGT..............................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..............CGAAGTGATGTTTGGCGTCG..................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................AGTGATGTTTGGCGTCGTGGT..............................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
............TTCGAAGTGATGTTTGGCGC....................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
GACATGTACTACTTCGAAGTGATGT...........................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................TTGGCGTCGTGGTCGCCTACGT.....................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................TCTATCGT--TCGG--CGGTGACCTTGACC............................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................TTTGGCGTCGTGGTCGCCTACGT.....................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
............TTCGAAGTGATGTTTGGC......................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................TTGGCGTCGTGGTCGCCTACGTATT..................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................GATGTTTGGCGTCGTGGC..............................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................AGTTCTATCGT--TCGG--CGGTGA....................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................TCTATCGT--TCGG--CGGTGACCT.................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.................................................................................................................................................................................................ATGAA-------------AA---------GTCGGTCGC--C-G-----ACT................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....TGTACTACTTCGAAGTGATGTTTGG.......................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
........................................................................................................................................................................................................................................................................................GTTCTATCGT--TCGG--CGGTGA....................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
...................................................................................................................................................................................................................AA---------GTCGGTCGC--C-G-----AC.................................................................................................................................................................................1511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........ACTTCGAAGTGATGTTTGG.......................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
...................TGATGTTTGGCGTCGTGGTCGCCTACGT.....................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..........ACTTCGAAGTGATGTTTGGCGTCGT.................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............TCGAAGTGATGTTTGGCGTCGTGGTCGC...........................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...........CTTCGAAGTGATGTTTGGCGTCGTGG...............................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..................GTGATGTTTGGCGTCGTGGTCGCC..........................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
........................TTTGGCGTCGTGGTCGCCTACGTAT...................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..CATGTACTACTTCGAAGTGATGTTT.........................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
......TACTACTTCGAAGTGATGTTTGGC......................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
..................GTGATGTTTGGCGTCGTGGT..............................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
GACATGTACTACTTCGAAGTGATGTT..........................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
......TACTACTTCGAAGTGATGTT..........................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................AAGTGATGTTTGGCGTCGTGG...............................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................GATGTTTGGCGTCGTGGT..............................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
............TTCGAAGTGATGTTTGGCGTCGTGG...............................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
.........................TTGGCGTCGTGGTCGCCTACGTATTC.................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...............................................................................................................................................................................................................................................................................................................................................................................................C-AAACTATTCACGGTCAGTC--G.............2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
...................................................................................................................................................................................................GAA-------------AA---------GTCGGTCGC--C-G-----ATC................................................................................................................................................................................1930.6720000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................A-------------AA---------GTCGGTCGC--C-G-----ACAT...............................................................................................................................................................................1840.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................A-------------AA---------GTCGGTCGC--C-G-----C..................................................................................................................................................................................1570.1410000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
GACATGTACTACTTCGAAGTGATGTTCGGCGTGGTGGTCGCCTACGTATTGTATCCTTTTA----------------------CCAAATCC--AAATAG------------------------CCAAAGTAC-------------------------------------------------GAAA-TAT-GGCATGAA-------------AA---------GTCGGTCAC--C-G-----ACTGATTAGATAG-------------------TGAAAGAGTTCTATTGT--CCGG--CGGTGACCTTGACCCGATTACCAAA--ATG------------------------------------AAGA--CCCCGCCACC--AC-AAACTATTCACGGTCAGTC--GGGCGTTTG-----SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
..........ACTTCGAAGTGATGTTCGGCGT....................................................................................................................................................................................................................................................................................................................................................................................................2212.00200000000000200000
............TTCGAAGTGATGTTCGGCGTGGTGGT..............................................................................................................................................................................................................................................................................................................................................................................................2611.00100000000001000000
..................................................................................................................................................................................................................................GTCAC--C-G-----ACTGATTAGATAG-------------------T..................................................................................................................................................2111.00110000000000000000
.................AGTGATGTTCGGCGTGGTGG...............................................................................................................................................................................................................................................................................................................................................................................................2011.00100000001000000000
....TGTACTACTTCGAAGTGATGTTCGGCG.....................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000010000000000
..CATGTACTACTTCGAAGTGATGTTCGGC......................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000010000000000
...................TGATGTTCGGCGTGGTG................................................................................................................................................................................................................................................................................................................................................................................................1711.00100000000001000000
..............................................................................................................................................................................................................................................................................................TTGT--CCGG--CGGTGACCTTGACCCGA.........................................................................................................2511.00100000010000000000
droSec2
GACATGTACTACTTCGAAGTGATGTTCGGCGTGGTGGTCGCCTACGTATTGTATCCTTTTA----------------------CCAAATCC--AAATAG------------------------CCAAAGTAC-------------------------------------------------GAAA-TAT-GGTATGAA-------------AA---------GTCGGTCAC--C-G-----ACTGATTAGATAG-------------------TGAAAGAGTTCTATTGT--CCGG--CGGTGACCTTGACCCGATTACCAAAA-ATG------------------------------------AAGA--CCCCGCCACC--AC-AAACTATTCACGGTCACC-----------------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
............TTCGAAGTGATGTTCGGCGTGG..................................................................................................................................................................................................................................................................................................................................................................................................2211.0011000
...ATGTACTACTTCGAAGTGATGTTCGGCGT....................................................................................................................................................................................................................................................................................................................................................................................................2911.0010100
...ATGTACTACTTCGAAGTGATGTTCGGC......................................................................................................................................................................................................................................................................................................................................................................................................2711.0010100
...........................................................................................................................................................................................AT-GGTATGAA-------------AA---------GTCGGTCAC--T-.........................................................................................................................................................................................2211.0010001
droYak3
GACATGTACTACTTCGAAGTGATGTTCGGCGTGGTGGTCGCCTATGTATTGTATCCTTTTA----------------------CCAAATCT--GA----------------------------TCAAAGCA--------------------------------------------TTGCTCTAAA-AAC-GGCATCAA-------------AA---------GTCGGTCACACC-G-----ACTGATTAGATAG-------------------TGAAAGAGTTCTATTGC--CCGG--CGGTGACCTTGACCCGATTACCAAAA-ATG------------------------------------AGCA--CCGCG-CACC--AC-AAACTATTCACGGTCAGTCGTGTGCGTTTG-----SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
...............GAAGTGATGTTCGGCGTGGC.................................................................................................................................................................................................................................................................................................................................................................................................2011.00100100000000
...............................................................................................................................................................................................................................................................................................................................CAAAA-ATG------------------------------------AGCA--CCGCG-CACC--......................................2111.00101000000000
...........................................................................................................................................................................................................................................................................................CTATTGC--CCGG--CGGTGACCTT................................................................................................................2111.00101000000000
.....GTACTACTTCGAAGTGATGTTC.........................................................................................................................................................................................................................................................................................................................................................................................................2211.00101000000000
..............CGAAGTGATGTTCGGCGTGGC.................................................................................................................................................................................................................................................................................................................................................................................................2111.00100100000000
droEre2
GACATGTACTACTTCGAAGTGATGTTCGGCGTGGTGGTCGCCTATGTATTGTATCCTTTTA----------------------CCAAATCTGCACA-AG------------------------CTAGAGACC-------------------------------------------------GAAAGAAC-GGTATCAA-------------AA---------GTCGGTCAC--C-G-----ACTGATTAGATAG-------------------TGAAAGAGTTCTATTCT--CCGG--CAGTGACCTTGACCCGATTACCAAAA-ACG------------------------------------AAGA--CCCCG-CACC--AC-AAACTATTCACGGTCAGTC--GTGCGATTG-----SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.....GTACTACTTCGAAGTGATGTTCGGC......................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000100
..................GTGATGTTCGGCGTGGTGGTCGC...........................................................................................................................................................................................................................................................................................................................................................................................2311.0010000010
..........ACTTCGAAGTGATGTTCGGCGTGGT.................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000010
...............GAAGTGATGTTCGGCGTGGT.................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000100
dp5
GATATGTATTACTTTGAAGTGATGTTCGGCGTAGTTGTCGCCTATGTATTGTATCCTTTTT----------------------TCAAACAC--ACACATACACACACAAA---------------------------------------------TCAGAAAAATCTTCAAAGAGATCTTCT---GAACGGGCAATAC-------------TA---------ATCGGGCACACGTT-----TCCGATTAGATAA-------------------T---AGATTTCTGCTGCTGTCAG--CAATAACCTTGACCTGATTACTCAAA-ATAGTCGCAGT-AGTGCTGTTGCCCCCAAAAACAGACAGAATGA--C-CGCCATCCGAC--TACTATTCACGGTCAACC--GTACATTTG----TSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
......TATTACTTTGAAGTGATGTTCGGCG.....................................................................................................................................................................................................................................................................................................................................................................................................2511.0010100000000
........................................................................................................................................................................................................................................................................................................................................GTCGCAGT-AGTGCTGTTGCCC......................................................................2111.0010010000000
droPer2
GATATGTATTACTTTGAAGTGATGTTCGGCGTAGTTGTCGCCTATGTATTGTATCCTTTTT----------------------GCAAACAC--ACACATACACACACAAA---------------------------------------------TCAGAAAAATCTTCAAAGAGATCTTCT---GAACGGGCAATAC-------------TA---------ATCGGGCACACGTT-----TCCGATTAGATAA-------------------T---AGATTTCTGCTGCTGTCAG--CAATAACCTTGACCTGATTACTCAAA-ATAGTCGCAGT-AGTGCTGTTGCCCCCAAAAACAGACAGAATGA--C-CGCCATCCGAC--TACTATTCACGGTCAACC--GTACATTTG----TSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.........TACTTTGAAGTGATGTTCGGC......................................................................................................................................................................................................................................................................................................................................................................................................2112.002200000
....................GATGTTCGGCGTAGTTGT..............................................................................................................................................................................................................................................................................................................................................................................................1811.001001000
droWil2
GACATGTATTATTTTGAAGTCATGTTTGGAGTGGTCGTCGCCTACGTATTGTATCCTTTTC----------------------TACAACAA--CAACAA------------------------GAAAAA---CAT-------A---------A-GCAAC---------------------------------------------------------------------AA-----ATCT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
......................TGTTTGGAGTGGTCGTCGCCT.........................................................................................................................................................................................................................................................................................................................................................................................2111.00110000
.....................ATGTTTGGAGTGGTCGTC.............................................................................................................................................................................................................................................................................................................................................................................................1811.00110000
.........................TTGGAGTGGTCGTCGCCTACG......................................................................................................................................................................................................................................................................................................................................................................................2111.00100100
..................GTCATGTTTGGAGTGGTCGTCGCCTA........................................................................................................................................................................................................................................................................................................................................................................................2611.00100001
droVir3
GACATGTATTATTTTGAAGTGATGTTCGGCGTTGTTGTCGCTTACGTATTGTATCCTTTTA----------------------ACATCAGC-----CAA------------------------GAAAAC---CAT-------A---------ACGAAAC---------------------------------------------------------------------TG-----ATCT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
..........ATTTTGAAGTGATGTTCGGC......................................................................................................................................................................................................................................................................................................................................................................................................2012.002000000000010010000000000000000000000000000000000000000000000000
....................GATGTTCGGCGTTGTTGTCGC...........................................................................................................................................................................................................................................................................................................................................................................................2112.002000000000020000000000000000000000000000000000000000000000000000
..........................CGGCGTTGTTGTCGCTTACGTAT...................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000000000000000000000000000000000000000000000000001
........TTATTTTGAAGTGATGTTCGGC......................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000000000000000000000010000000000000000000000000000
................AAGTGATGTTCGGCGTTGTTG...............................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000100000000000000000000000000000
.....GTATTATTTTGAAGTGATGTTC.........................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000000000000000000000000010000000000000000000000000
.................AGTGATGTTCGGCGTTGTTGTCGCT..........................................................................................................................................................................................................................................................................................................................................................................................2511.001000000000000000000000000000000000000000000000000000000000000100
..................................TTGTCGCTTACGTATTGTATCC............................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000000000000010000000000000000000000000000000000000
.......ATTATTTTGAAGTGATGTTCGGC......................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000010000000000000000000000000000000000000000000000000000000
.........TATTTTGAAGTGATGTTCGGCGTTG..................................................................................................................................................................................................................................................................................................................................................................................................2511.001000000000000000000000000000010000000000000000000000000000000000
....................GATGTTCGGCGTTGTTGT..............................................................................................................................................................................................................................................................................................................................................................................................1811.001000000000000000000000000000001000000000000000000000000000000000
droMoj3
GACATGTATTATTTTGAAGTGATGTTCGGCGTTGTTGTCGCCTATGTATTGTATCCTTTTC----------------------CAAAACAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
....................GATGTTCGGCGTTGTTGTCGCCTATG......................................................................................................................................................................................................................................................................................................................................................................................2611.001000001
droGri2
GACATGTATTACTTTGAAGTGATGTTCGGCGTTGTTGTCGCCTACGTATTGTATCCTTTTC----------------------A--TATGC--AAACAA------------------------CAAAACA-----------------------------------ATT-------------GACG-CAT--GCATGTA--------------A---------ATTAGTTGC--A-G-----ACTACATAAATTG-------------------TGTGTGA--------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/18/2015 at 02:15 AM