ID:

dan_1496

 Coordinate:

scaffold_13248:850600-850750 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-17.4

Flybase annnotation

CDS [Dana\GF22506-cds]; exon [dana_GLEANR_6470:2]; intron [Dana\GF22506-in]

No Repeatable elements found

mature
  1. dan_1496  scaffold_13248:850678-850701 +
  2. scaffold_13248:851245-851268 +
star
  1. scaffold_13248:842969-842990 -
  2. scaffold_13248:843174-843195 -
  3. scaffold_13248:843534-843555 -
  4. scaffold_13248:843739-843760 -
  5. scaffold_13248:843903-843924 -
  6. scaffold_13248:844058-844079 -
  7. scaffold_13248:845201-845222 -
  8. scaffold_13248:845438-845459 -
  9. scaffold_13248:845684-845705 -
  10. scaffold_13248:846012-846033 -
  11. scaffold_13248:846085-846106 -
  12. dan_1495  scaffold_13248:849310-849331 +
  13. dan_1495  scaffold_13248:849433-849454 +
  14. dan_1496  scaffold_13248:850628-850649 +
  15. dan_1496  scaffold_13248:850710-850731 +
  16. scaffold_13248:850792-850813 +
  17. scaffold_13248:850915-850936 +
  18. scaffold_13248:851277-851298 +
  19. dan_1497  scaffold_13248:851441-851462 +

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAGGAACCGGGTAAAAAGCTACAGGAGCCTGGTTACAGGCTGCAGGAACCGGGTAGGGGCTACTGGAGCCGGGCTACAGGCTTCAGGAACCGGGTGGGGGCTACTGGAGCCCGGATACAGGCTGCAGGAACCGGGTAGGGGCTACTGGAGCCGGGCTACAGGCTACAGGAACCGGGTAGGGGCTACTGGAACCAGGCTACAGGCTGCAGGA
********************************************************************************************************************************(((.(((........(((.((((........)))).)))..))).)))......********************************************************************* 		Read size # Mismatch Hit Count Total Norm Total V106
head
 M044
female body
 M058
embryo
 V105
male body		 V055
head
 V039
embryo
...................................................................................................................................................................................................................CCGGGTAGGGGCTACTGGAAC................... 21 0 1 1.00 1 0 0 1 0 0 0
................................................................................................................................ACCGGGTGGGGGCTACTGGAGCCC................................................................................................... 24 0 2 1.00 2 2 0 0 0 0 0
.........................................................................................................................................................GATACAGGCTGCAAGAACCGG............................................................................. 21 1 1 1.00 1 1 0 0 0 0 0
................................................................................................................................................................GCTGCAGGAACCGGGTAGGGGC..................................................................... 22 0 19 0.53 10 9 0 0 1 0 0
..............................................................................GCTGCAGGAACCGGGTAGGGGC....................................................................................................................................................... 22 0 19 0.53 10 9 0 0 1 0 0
..........................................................................................................................................................................................................CTACAGGAACCGGGTAGGGGC............................ 21 0 10 0.50 5 2 2 1 0 0 0
...............................................................................................................................................................................................................................TACTGGAACCAGGCTACGGG........ 20 1 2 0.50 1 0 1 0 0 0 0
..................................................................................................GCTACTGGAGCCGGGCTACAG.................................................................................................................................... 21 0 20 0.45 9 8 0 0 1 0 0
...................................................................................................................................................................GCAGGAACCGGGTAGGGGC..................................................................... 19 0 19 0.37 7 6 0 0 1 0 0
.................................................................................GCAGGAACCGGGTAGGGGC....................................................................................................................................................... 19 0 19 0.37 7 6 0 0 1 0 0
..............................................................................................................................GAACCGGGTGGGGGCTACTGGAGCC.................................................................................................... 25 0 3 0.33 1 1 0 0 0 0 0
................................................................................................................................................................................................................GAACCGGGTAGGGGCAACTGGAA.................... 23 1 3 0.33 1 0 0 1 0 0 0
...............................................................................................................................AACCGGGTGGGGGCTACTGGAGCC.................................................................................................... 24 0 3 0.33 1 1 0 0 0 0 0
.............................................................................GGCTGCAGGAACCGGGTAGGGGC....................................................................................................................................................... 23 0 19 0.32 6 6 0 0 0 0 0
...............................................................................................................................................................GGCTGCAGGAACCGGGTAGGGGC..................................................................... 23 0 19 0.32 6 6 0 0 0 0 0
..........................................................................................................................................................................................................CTACAGGAACCGGGTAGGGG............................. 20 0 10 0.30 3 2 1 0 0 0 0
...................................................................................................................................................................................................CTACAGGCTACAGGAACCGGG................................... 21 0 10 0.30 3 3 0 0 0 0 0
..................................................................................................................................................................................................................ACCGGGTGGGGGCTACTGGAAA................... 22 2 4 0.25 1 1 0 0 0 0 0
................................................................................................................................ACCGGGTGGGGGCTACTGGAAA..................................................................................................... 22 2 4 0.25 1 1 0 0 0 0 0
...........................................................................................................................................................................................................TACAGGAACCGGGTAGGGGCT........................... 21 0 9 0.22 2 0 1 1 0 0 0
.................................................................................................................................................................CTGCAGGAACCGGGTAGGG....................................................................... 19 0 19 0.21 4 0 2 1 1 0 0
.................................................................................................................................................................CTGCAGGAACCGGGTAGG........................................................................ 18 0 19 0.21 4 0 4 0 0 0 0
...............................................................................CTGCAGGAACCGGGTAGGG......................................................................................................................................................... 19 0 19 0.21 4 0 2 1 1 0 0
...............................................................................CTGCAGGAACCGGGTAGG.......................................................................................................................................................... 18 0 19 0.21 4 0 4 0 0 0 0
.................................................................................................................................................................CTGCAGGAACCGGGTAGGGG...................................................................... 20 0 19 0.21 4 0 1 1 2 0 0
...............................................................................CTGCAGGAACCGGGTAGGGG........................................................................................................................................................ 20 0 19 0.21 4 0 1 1 2 0 0
...........................................................................................................................................................................................................TACAGGAACCGGGTAGGGTT............................ 20 2 10 0.20 2 2 0 0 0 0 0
............................................................................................................................................................................................................ACAGGAACCGGGTAGGGGC............................ 19 0 10 0.20 2 1 0 0 1 0 0
..................................................................................................................................................................................................GCTACAGGCTACAGGAACCGG.................................... 21 0 10 0.20 2 1 1 0 0 0 0
..................................................................................................................TACAGGCTTCAGGAACCGGGT.................................................................................................................... 21 0 6 0.17 1 1 0 0 0 0 0
.................................................................................................................CTACAGGCTTCAGGAACCGGG..................................................................................................................... 21 0 6 0.17 1 1 0 0 0 0 0
.................................................................................................................CTACAGGCTTCAGGAACCGG...................................................................................................................... 20 0 6 0.17 1 1 0 0 0 0 0
...............................................................................CTGCAGGAACCGGGTAGGGGC....................................................................................................................................................... 21 0 19 0.16 3 0 1 2 0 0 0
................................................................................................................................................................GCTGCAGGAACCGGGTAGGGG...................................................................... 21 0 19 0.16 3 2 0 0 1 0 0
.................................................................................................................................................................CTGCAGGAACCGGGTAGGGGC..................................................................... 21 0 19 0.16 3 0 1 2 0 0 0
..............................................................................GCTGCAGGAACCGGGTAGGGG........................................................................................................................................................ 21 0 19 0.16 3 2 0 0 1 0 0
.....................................................................................................................................................................................CTACTGGAGCCGGGCTACAGG................................................. 21 0 20 0.15 3 2 1 0 0 0 0
...................................................................................................CTACTGGAGCCGGGCTACAGG................................................................................................................................... 21 0 20 0.15 3 2 1 0 0 0 0
..................................................................................................................TGCAGGCTTCAGGAACCGGGTTGA................................................................................................................. 24 3 8 0.13 1 1 0 0 0 0 0
......................................................................................................CTGGAGCCGGCCTACAGGCTT................................................................................................................................ 21 1 8 0.13 1 0 1 0 0 0 0
...........................................................................................................................................................................................................TACAGGAACCGGGTAGGGGCTT.......................... 22 1 9 0.11 1 1 0 0 0 0 0
...........................................................................................................................................................................................................TACAGGAACCGGGTAGGGGTT........................... 21 1 9 0.11 1 0 0 0 1 0 0
....................................................................................................................................................................................................TACAGGCTACAGGAACCGGGTAGGGGC............................ 27 0 9 0.11 1 1 0 0 0 0 0
..................................................................................................................................................................TGCAGGAACCGGGTAGGGG...................................................................... 19 0 19 0.11 2 0 0 0 2 0 0
..................................................................................................................................................................TGCAGGAACCGGGTAGGGGC..................................................................... 20 0 19 0.11 2 2 0 0 0 0 0
................................................................................TGCAGGAACCGGGTAGGGGC....................................................................................................................................................... 20 0 19 0.11 2 2 0 0 0 0 0
................................................................................TGCAGGAACCGGGTAGGGG........................................................................................................................................................ 19 0 19 0.11 2 0 0 0 2 0 0
................................................................................................................................................................GCTGCAGGAGCCGGGTAGGGGC..................................................................... 22 1 19 0.11 2 2 0 0 0 0 0
..............................................................................GCTGCAGGAGCCGGGTAGGGGC....................................................................................................................................................... 22 1 19 0.11 2 2 0 0 0 0 0
...........................................................................................................................................................................CGGGTAGGGGCTACTGGAGC............................................................ 20 0 20 0.10 2 0 1 0 0 0 1
...................................................................................................................................................................................................CTACAGGCTACAGGAACCGG.................................... 20 0 10 0.10 1 0 1 0 0 0 0
.......................................................................................................................................................................................ACTGGAGCCGGGCTACAGGC................................................ 20 0 20 0.10 2 0 1 0 1 0 0
.......................................................................................................................................................................................ACTGGAGCCGGGCTACAGG................................................. 19 0 20 0.10 2 1 1 0 0 0 0
..........................................................................................................................................................................................................CTACAGGAACCGGGTAGGGGT............................ 21 1 10 0.10 1 0 0 0 1 0 0
.....................................................................................................ACTGGAGCCGGGCTACAGG................................................................................................................................... 19 0 20 0.10 2 1 1 0 0 0 0
.........................................................................................................................................................................................................GCTACAGGAACCGGGTAGGGG............................. 21 0 10 0.10 1 0 0 0 1 0 0
.....................................................................................GAACCGGGTAGGGGCTACTGGAGCC............................................................................................................................................. 25 0 20 0.10 2 2 0 0 0 0 0
..........................................................................................................................................................................................................CTACAGGAACCGGGTAGGG.............................. 19 0 10 0.10 1 0 1 0 0 0 0
................................................................................................................................................................GCTGCAGGAACCGGGTAGGGGT..................................................................... 22 1 20 0.10 2 2 0 0 0 0 0
.......................................................................................................................................................................GAACCGGGTAGGGGCTACTGGAGCC........................................................... 25 0 20 0.10 2 2 0 0 0 0 0
......................................................................GGTCACAGGCGGCAGGAATCG................................................................................................................................................................ 21 3 10 0.10 1 0 1 0 0 0 0
...........................................................................................................................................................TACAGGCTGCAGGAACCGGGT........................................................................... 21 0 20 0.10 2 2 0 0 0 0 0
..........................................................................................................................................................................................................CTACAGGAACCGGGTAGGGGCC........................... 22 1 10 0.10 1 0 0 1 0 0 0
........................................................................................................................................................................................................GGCTACAGGAACCGGGTAGGGGC............................ 23 0 10 0.10 1 1 0 0 0 0 0
.........................................................................................................................................................................................................GCTACAGGAACCGGGTAGG............................... 19 0 10 0.10 1 0 1 0 0 0 0
.........................................................................................................................................................................................................GCTACAGGAACCGGGTAGGGGC............................ 22 0 10 0.10 1 1 0 0 0 0 0
....................................................................................................................................................................................................TACAGGCTACGGGAACCGGGTAGGG.............................. 25 1 10 0.10 1 1 0 0 0 0 0
............................................................................................................................................................ACAGGCTGCAGGAACCGGG............................................................................ 19 0 20 0.10 2 0 2 0 0 0 0
.........................................................................................CTGGTAGGGGCTACTGGAGCC............................................................................................................................................. 21 1 20 0.10 2 0 0 2 0 0 0
.....................................................................................................ACTGGAGCCGGGCTACAGGC.................................................................................................................................. 20 0 20 0.10 2 0 1 0 1 0 0
..........................................................................ACAGGCTGCAGGAACCGGG.............................................................................................................................................................. 19 0 20 0.10 2 0 2 0 0 0 0
...........................................................................................GGTAGGGGCTACTGGAGT.............................................................................................................................................. 18 1 20 0.10 2 2 0 0 0 0 0
.............................................................................................................................................................................GGTAGGGGCTACTGGAGT............................................................ 18 1 20 0.10 2 2 0 0 0 0 0
...........................................................................................................................................................................CTGGTAGGGGCTACTGGAGCC........................................................... 21 1 20 0.10 2 0 0 2 0 0 0
.........................................................................................CGGGTAGGGGCTACTGGAGC.............................................................................................................................................. 20 0 20 0.10 2 0 1 0 0 0 1
.....................................................................................................................................................................................................ACAGGCTACAGGAACCGGG................................... 19 0 11 0.09 1 0 1 0 0 0 0
............................................................................................................................AGGGACCGGGTGGGGGGT............................................................................................................. 18 2 11 0.09 1 0 0 0 0 1 0
....................................................................................................................................................................................................TACAGGCTACAGGAACCGGG................................... 20 0 11 0.09 1 0 1 0 0 0 0
..........................................................................................................................................................................................................CTACGGGAACCGGGTAGGGGC............................ 21 1 11 0.09 1 1 0 0 0 0 0
................................................................................................................................................................................................GTGCTACAGGCTACAGGAACC...................................... 21 1 12 0.08 1 0 0 1 0 0 0
..........................................TAAACCTGGTAAAAAGCTAC............................................................................................................................................................................................. 20 3 13 0.08 1 0 0 1 0 0 0
..................................................................................................................................................................................................GCTACAGGTTACAGGAACCGG.................................... 21 1 13 0.08 1 0 1 0 0 0 0
.......................................................................................................................GCTACAGGAACCGGGTGGGGG............................................................................................................... 21 1 14 0.07 1 0 0 0 1 0 0
..................................................................................................................................................................................................GCTACAGGGTACAGGAACCGGTT.................................. 23 2 14 0.07 1 0 1 0 0 0 0
.........................................................................................................................................................................................................GCTACAGGAACCGGGTGGGGG............................. 21 1 14 0.07 1 0 0 0 1 0 0
.......................................................................................................................GCTACAGGAACCGGGTGG.................................................................................................................. 18 1 15 0.07 1 1 0 0 0 0 0
.........................................................................................................................................................................................................GCTACAGGAACCGGGTGG................................ 18 1 15 0.07 1 1 0 0 0 0 0
.................................................................................................................................................................CTGCAGGAACCGGGTAGGGGCT.................................................................... 22 0 18 0.06 1 0 1 0 0 0 0
...............................................................................CTGCAGGAACCGGGTAGGGGCT...................................................................................................................................................... 22 0 18 0.06 1 0 1 0 0 0 0
.............................................................................GGCTGCAGGAACCGGGTAGGGGCT...................................................................................................................................................... 24 0 18 0.06 1 1 0 0 0 0 0
...............................................................................................................................................................GGCTGCAGGAACCGGGTAGGGGCT.................................................................... 24 0 18 0.06 1 1 0 0 0 0 0
.................................................................................GCAGGAACCGGGTAGGGGAT...................................................................................................................................................... 20 1 18 0.06 1 1 0 0 0 0 0
...................................................................................................................................................................GCAGGAACCGGGTAGGGGAT.................................................................... 20 1 18 0.06 1 1 0 0 0 0 0
.............................................................................................................................................................CAGGCTGCAGGAACCGGGTAGGG....................................................................... 23 0 19 0.05 1 1 0 0 0 0 0
...............................................................................................................................................................GGCTGCAGGAACCGGGTAGGG....................................................................... 21 0 19 0.05 1 1 0 0 0 0 0
................................................................................................................................................................GCTGCAGGAACCGTGTAGGGGC..................................................................... 22 1 19 0.05 1 1 0 0 0 0 0
................................................................................................................................................................GCTGCAGGAACCGGGAAGGGGC..................................................................... 22 1 19 0.05 1 1 0 0 0 0 0
..............................................................................GCTGCAGGAACCGGGTAGGG......................................................................................................................................................... 20 0 19 0.05 1 0 0 0 0 0 1
................................................................................................................................................................GCTGCAGGAACCGGGTAGG........................................................................ 19 0 19 0.05 1 1 0 0 0 0 0
..............................................................................GCTGCAGGAACCGGGAAGGGGC....................................................................................................................................................... 22 1 19 0.05 1 1 0 0 0 0 0
.................................................................................GCAGGAACCGGGTAGGGG........................................................................................................................................................ 18 0 19 0.05 1 1 0 0 0 0 0
..................................................................................................................................................................TGCAGGAAGCGGGTAGGGGCT.................................................................... 21 1 19 0.05 1 0 1 0 0 0 0
.............................................................................................................................................................CAGGCTGCAGGAACCGGGTAGGGG...................................................................... 24 0 19 0.05 1 1 0 0 0 0 0
................................................................................TGCAGGAAGCGGGTAGGGGCT...................................................................................................................................................... 21 1 19 0.05 1 0 1 0 0 0 0
...........................................................................CAGGCTGCAGGAACCGGGTAGGGG........................................................................................................................................................ 24 0 19 0.05 1 1 0 0 0 0 0
...............................................................................................................................................................GGCTGCAGGAACCGGGTAGGGG...................................................................... 22 0 19 0.05 1 1 0 0 0 0 0
.............................................................................GGCTGCAGGAACCGGGTAGGGG........................................................................................................................................................ 22 0 19 0.05 1 1 0 0 0 0 0
................................................................................................................................................................GCTGCAGGAACCGGGTAGGG....................................................................... 20 0 19 0.05 1 0 0 0 0 0 1
................................................................................................................................................................GCTGCAGGAACCGGGTAGGT....................................................................... 20 1 19 0.05 1 0 0 0 1 0 0
...............................................................................CGGCAGGAACCGGGTAGGGGC....................................................................................................................................................... 21 1 19 0.05 1 0 0 1 0 0 0
...........................................................................CAGGCTGCAGGAACCGGGTAGGG......................................................................................................................................................... 23 0 19 0.05 1 1 0 0 0 0 0
.............................................................................GGCTGCAGGAACCGGGTAGGG......................................................................................................................................................... 21 0 19 0.05 1 1 0 0 0 0 0
...................................................................................................................................................................GCAGGAACCGGGTAGGGG...................................................................... 18 0 19 0.05 1 1 0 0 0 0 0
...........................................................................CAGGCTGCAGGAACCGGGTAG........................................................................................................................................................... 21 0 19 0.05 1 0 1 0 0 0 0
.................................................................................................................................................................CGGCAGGAACCGGGTAGGGGC..................................................................... 21 1 19 0.05 1 0 0 1 0 0 0
.............................................................................................................................................................CAGGCTGCAGGAACCGGGTAG......................................................................... 21 0 19 0.05 1 0 1 0 0 0 0
..............................................................................GCTGCAGGAACCGGGTAGG.......................................................................................................................................................... 19 0 19 0.05 1 1 0 0 0 0 0
..............................................................................GCTGCAGGAACCGGGTAGGT......................................................................................................................................................... 20 1 19 0.05 1 0 0 0 1 0 0
..............................................................................GCTGCAGGAACCGTGTAGGGGC....................................................................................................................................................... 22 1 19 0.05 1 1 0 0 0 0 0
...................................................................................................CTACTGGAGCCGGCCTACAG.................................................................................................................................... 20 1 20 0.05 1 0 1 0 0 0 0
...........................................................................................GGTAGGGGCTACTGGAGCCGGGC......................................................................................................................................... 23 0 20 0.05 1 1 0 0 0 0 0
...............................................................................................................................................................GGCTGCAGGAACCGGGTATGGG...................................................................... 22 1 20 0.05 1 0 0 0 1 0 0
............................................................................................................................................................................GGGTAGGGGCTACTGGAGCCTGGC....................................................... 24 1 20 0.05 1 1 0 0 0 0 0
...................................................................................................................................................................GCAGGAACCTGGTAGGGGC..................................................................... 19 1 20 0.05 1 1 0 0 0 0 0
...........................................................................................................................................................................CAGGTAGGGGCTACTGGAGCCGGGC....................................................... 25 1 20 0.05 1 1 0 0 0 0 0
................................................................................................................................................................................AGGGGCTACTGGAGCCGGGCTT..................................................... 22 1 20 0.05 1 1 0 0 0 0 0
..............................................................................................................................................................................GTAGGGGCTACTGGAGCCGGT........................................................ 21 1 20 0.05 1 0 1 0 0 0 0
....................................................................................................................................................................................GCTACTGGAGCCGGGCTACAGG................................................. 22 0 20 0.05 1 1 0 0 0 0 0
...............................................................................................GGGGCTACTGGAGCCGGGCTACAGG................................................................................................................................... 25 0 20 0.05 1 0 1 0 0 0 0
..............................................................................................ATGGGCTTCTGGAGCCGGGCC........................................................................................................................................ 21 3 20 0.05 1 0 0 1 0 0 0
.................................................................................GCAGTAACCGGGTATGGGC....................................................................................................................................................... 19 2 20 0.05 1 1 0 0 0 0 0
..........................................................................................................................................................................CCGGGTAGGGGCTACTGGAGC............................................................ 21 0 20 0.05 1 0 1 0 0 0 0
...................................................................................................CTACTGGAGCCGGGCTACA..................................................................................................................................... 19 0 20 0.05 1 1 0 0 0 0 0
...............................................................................CTGCAGGAACCGGGTAGGGGCTT..................................................................................................................................................... 23 1 20 0.05 1 0 1 0 0 0 0
..................................................................................................................................................................................................CCTACAGGCTACAGGAACCGG.................................... 21 1 20 0.05 1 1 0 0 0 0 0
.........................................................................................CAGGTAGGGGCTACTGGAGCCGGGC......................................................................................................................................... 25 1 20 0.05 1 1 0 0 0 0 0
.............................................................................GGCTGCAGGAACCGGGTATGGGC....................................................................................................................................................... 23 1 20 0.05 1 1 0 0 0 0 0
...........................................................................CAGGCTGAAGGAACCGGGT............................................................................................................................................................. 19 1 20 0.05 1 1 0 0 0 0 0
..................................................................................................GCTACTGGAGCCGGGCTACAGG................................................................................................................................... 22 0 20 0.05 1 1 0 0 0 0 0
...................................................................................AGGAACCGGGTAGGGGCTACT................................................................................................................................................... 21 0 20 0.05 1 0 1 0 0 0 0
....................................................................................................................................................................................GCTACTGGAGCCGGGCTACAG.................................................. 21 0 20 0.05 1 0 0 0 1 0 0
..................................................................................................................................................................................GGGCTACTGGAGCCGGCCT...................................................... 19 1 20 0.05 1 0 1 0 0 0 0
....................................................................................................................................................................................GCTACTGGAGCCGGGCTACAAGC................................................ 23 1 20 0.05 1 1 0 0 0 0 0
...........................................................................CAGGCTGCAGGAACCGGGTA............................................................................................................................................................ 20 0 20 0.05 1 0 1 0 0 0 0
.......................................................................................ACCGGGTATGGGCTACTGGAGCC............................................................................................................................................. 23 1 20 0.05 1 0 1 0 0 0 0
.....................................................................................................................................................................................CTACTGGAGCCGGGCTACA................................................... 19 0 20 0.05 1 1 0 0 0 0 0
...........................................................................................................................................................................CGGGTAGGGGCTACTGGAGCC........................................................... 21 0 20 0.05 1 0 1 0 0 0 0
.................................................................................................................................................................................GGGGCTACTGGAGCCGGGC....................................................... 19 0 20 0.05 1 1 0 0 0 0 0
................................................................................................GGGCTACTGGAGCCGGCCT........................................................................................................................................ 19 1 20 0.05 1 0 1 0 0 0 0
....................................................................................................TACTGGAGCCGGTCTACAGGC.................................................................................................................................. 21 1 20 0.05 1 1 0 0 0 0 0
.........................................................................................................................................................................ACCGGGTATGGGCTACTGGAGCC........................................................... 23 1 20 0.05 1 0 1 0 0 0 0
....................................................................................................................................................................................GCTACTGGAGCCGGGATACAG.................................................. 21 1 20 0.05 1 1 0 0 0 0 0
................................................................................................................................................................GCTGCAGGAACCGGGTAGGGGTT.................................................................... 23 1 20 0.05 1 1 0 0 0 0 0
................................................................................................................................................................GCTGCAGGAACCGGGTAGGTT...................................................................... 21 2 20 0.05 1 0 1 0 0 0 0
...............................................................................................GGGGCTACTGGAGCCGGGC......................................................................................................................................... 19 0 20 0.05 1 1 0 0 0 0 0
......................................................................................................................................................................................TACTGGAGCCGGTCTACAGGC................................................ 21 1 20 0.05 1 1 0 0 0 0 0
.....................................................................................................................................................................................CTACTGGAGCCGGCCTACAG.................................................. 20 1 20 0.05 1 0 1 0 0 0 0
.......................................................................................ACCGGGTAGGGGCTGCTGGAGCCGGGC......................................................................................................................................... 27 1 20 0.05 1 1 0 0 0 0 0
............................................................................................................................................................................GGGTAGGGGCTGCTGGAGCCGGGC....................................................... 24 1 20 0.05 1 1 0 0 0 0 0
.........................................................................................CGGGTAGGGGCTACTGGAGAC............................................................................................................................................. 21 1 20 0.05 1 0 0 1 0 0 0
.........................................................................................CGGGTAGGGGCTACTGGAGCC............................................................................................................................................. 21 0 20 0.05 1 0 1 0 0 0 0
...........................................................................................................................................................TACAGGCTGCAGGAACCGG............................................................................. 19 0 20 0.05 1 1 0 0 0 0 0
.............................................................................................TAGGGGCTACTGGAGCCGGGCT........................................................................................................................................ 22 0 20 0.05 1 1 0 0 0 0 0
................................................................................................................................................................GCTGCAGGATCCGGGTAGGGTC..................................................................... 22 2 20 0.05 1 1 0 0 0 0 0
..........................................................................................GGGTAGGGGCTGCTGGAGCCGGGC......................................................................................................................................... 24 1 20 0.05 1 1 0 0 0 0 0
...............................................................................................................................................................................TAGGGGCTACTGGAGCCGGGCT...................................................... 22 0 20 0.05 1 1 0 0 0 0 0
.........................................................................................................................................................................ACCGGGTAGGGGCTGCTGGAGCCGGGC....................................................... 27 1 20 0.05 1 1 0 0 0 0 0
..................................................................................................GCTACTGGAGCCGGGATACAG.................................................................................................................................... 21 1 20 0.05 1 1 0 0 0 0 0
.........................................................................TACAGGCTGCAGGAACCGG............................................................................................................................................................... 19 0 20 0.05 1 1 0 0 0 0 0
.................................................................................................................................................................................GGGGCTACTGGAGCCGGGCTACAGG................................................. 25 0 20 0.05 1 0 1 0 0 0 0
................................................................................................................................................................GCTGCAGGAACCGGGCAGGGGTT.................................................................... 23 2 20 0.05 1 0 0 0 0 1 0
................................................................................................................................................................................AGGGGCTACTGGAGCCGGGCTACA................................................... 24 0 20 0.05 1 0 1 0 0 0 0
....................................................................................................................................................................................................................................GAACCAGGATACAGGCTGCAG.. 21 1 20 0.05 1 0 1 0 0 0 0
.....................................................................................................................................................................AGGAACCGGGTAGGGGCTACT................................................................. 21 0 20 0.05 1 0 1 0 0 0 0
..............................................................................GCTGCAGGAACCGGGTAGGGGTT...................................................................................................................................................... 23 1 20 0.05 1 1 0 0 0 0 0
...................................................................................................CTACTGGAGCCGGTCTACAGG................................................................................................................................... 21 1 20 0.05 1 0 0 0 0 1 0
.........................................................................................................................................................................................................GCTACAGAAACTGGGTGGGGG............................. 21 3 20 0.05 1 0 0 0 1 0 0
...........................................................................................................................................................................CGGGTAGGGGCTACTGGAGAC........................................................... 21 1 20 0.05 1 0 0 1 0 0 0
.................................................................................GCAGGAACCTGGTAGGGGC....................................................................................................................................................... 19 1 20 0.05 1 1 0 0 0 0 0
.............................................................................GGCTGCAGGAACCGGGTATGGG........................................................................................................................................................ 22 1 20 0.05 1 0 0 0 1 0 0
..............................................................................GCTGCAGGATCCGGGTAGGGTC....................................................................................................................................................... 22 2 20 0.05 1 1 0 0 0 0 0
..........................................................................................GGGTAGGGGCTACTGGAGCCTGGC......................................................................................................................................... 24 1 20 0.05 1 1 0 0 0 0 0
.............................................................................................................................................................CAGGCTGCAGGAACCGGGTA.......................................................................... 20 0 20 0.05 1 0 1 0 0 0 0
............................................................................................GTAGGGGCTACTGGAGCCGGT.......................................................................................................................................... 21 1 20 0.05 1 0 1 0 0 0 0
.............................................................................................................................................................CAGGCTGAAGGAACCGGGT........................................................................... 19 1 20 0.05 1 1 0 0 0 0 0
...................................................................................................................................................................GCAGTAACCGGGTATGGGC..................................................................... 19 2 20 0.05 1 1 0 0 0 0 0
..............................................................................GCTGCAGGAACCGGGCAGGGGTT...................................................................................................................................................... 23 2 20 0.05 1 0 0 0 0 1 0
................................................................................................................................................................................ATGGGCTTCTGGAGCCGGGCC...................................................... 21 3 20 0.05 1 0 0 1 0 0 0
.....................................................................................................................................................................................CTACTGGAGCCGGCCTACAGG................................................. 21 1 20 0.05 1 0 0 0 1 0 0
.............................................................................................................................................................................GGTAGGGGCTACTGGAGCCGGGC....................................................... 23 0 20 0.05 1 1 0 0 0 0 0
..............................................................................GCTGCAGGAACCGGGTAGGTT........................................................................................................................................................ 21 2 20 0.05 1 0 1 0 0 0 0
......................................................................................................CTGGAGCCGGGCTACAGGC.................................................................................................................................. 19 0 20 0.05 1 1 0 0 0 0 0
.................................................................................................................................................................CTGCAGGAACCGGGTAGGGGCTT................................................................... 23 1 20 0.05 1 0 1 0 0 0 0
..................................................................................................................................................................TGCAGGAACCGGGTAGGGTTT.................................................................... 21 2 20 0.05 1 0 0 0 1 0 0
...................................................................................................CTACTGGAGCCGGCCTACAGG................................................................................................................................... 21 1 20 0.05 1 0 0 0 1 0 0
..................................................................................................GCTACTGGAGCCGGGCTACAAGC.................................................................................................................................. 23 1 20 0.05 1 1 0 0 0 0 0
..............................................................................................................................................................................................................AGGAACCGGGTAGGGGCTACT........................ 21 0 20 0.05 1 0 1 0 0 0 0
........................................................................................................................................................................................CTGGAGCCGGGCTACAGGC................................................ 19 0 20 0.05 1 1 0 0 0 0 0
...............................................................................................................................................................GGCTGCAGGAACCGGGTATGGGC..................................................................... 23 1 20 0.05 1 1 0 0 0 0 0
..................................................................................................GCTACTGGAGCCGGGCTAC...................................................................................................................................... 19 0 20 0.05 1 0 1 0 0 0 0
.....................................................................................................................................................................................CTACTGGAGCCGGGCTACAGGC................................................ 22 0 20 0.05 1 0 0 1 0 0 0
....................................................................................................................................................................................GCTACTGGAGCCGGGCTAC.................................................... 19 0 20 0.05 1 0 1 0 0 0 0
........................................................................................CCGGGTAGGGGCTACTGGAGC.............................................................................................................................................. 21 0 20 0.05 1 0 1 0 0 0 0
.....................................................................................................................................................................................CTACTGGAGCCGGTCTACAGG................................................. 21 1 20 0.05 1 0 0 0 0 1 0
............................................................................................................................................................................GGGTAGGGGCTACTGGAGCCGGGC....................................................... 24 0 20 0.05 1 1 0 0 0 0 0
...................................................................................................CTACTGGAGCCGGGCTACAGGC.................................................................................................................................. 22 0 20 0.05 1 0 0 1 0 0 0
..............................................................................................AGGGGCTACTGGAGCCGGGCTACA..................................................................................................................................... 24 0 20 0.05 1 0 1 0 0 0 0
.........................................................................TACAGGCTGCAGGAACCGGG.............................................................................................................................................................. 20 0 20 0.05 1 0 1 0 0 0 0
..........................................................................................GGGTAGGGGCTACTGGAGCCGGGC......................................................................................................................................... 24 0 20 0.05 1 1 0 0 0 0 0
...........................................................................................................................................................TACAGGCTGCAGGAACCGGG............................................................................ 20 0 20 0.05 1 0 1 0 0 0 0
..............................................................................................AGGGGCTACTGGAGCCGGGCTT....................................................................................................................................... 22 1 20 0.05 1 1 0 0 0 0 0

Anti-sense strand reads

NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTCCTTGGCCCATTTTTCGATGTCCTCGGACCAATGTCCGACGTCCTTGGCCCATCCCCGATGACCTCGGCCCGATGTCCGAAGTCCTTGGCCCACCCCCGATGACCTCGGGCCTATGTCCGACGTCCTTGGCCCATCCCCGATGACCTCGGCCCGATGTCCGATGTCCTTGGCCCATCCCCGATGACCTTGGTCCGATGTCCGACGTCCT
*********************************************************************(((.(((........(((.((((........)))).)))..))).)))......******************************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M044
female body
 V106
head
 M058
embryo
 V055
head
 V105
male body
...........................................................................................................................................................................................................................CCCGATGACCTTGGTCCGATG........... 21 0 1 1.00 1 1 0 0 0 0
..........................................................................................................................................................................................................................CCCCGGTGACCTTGGTCCGA............. 20 1 1 1.00 1 1 0 0 0 0
..........................................................................................................................................................................................................................CCCCGATGACCTTGGTCCG.............. 19 0 1 1.00 1 0 1 0 0 0
..............................................................................................................................................................................................................TCCTTGGCCCATCCCCGATGACCTT.................... 25 0 1 1.00 1 1 0 0 0 0
...........................................................................................................CGGCCCGATGTCCGAAGTCCT........................................................................................................................... 21 0 5 0.80 4 3 0 1 0 0
..........................................................................................................................................................................................................................CGCCGACGACCGTGGTCCGA............. 20 3 20 0.65 13 1 0 12 0 0
...................................................................................................................................................................................................................................CCTTGGTCCGATGTCCGACGT... 21 0 20 0.60 12 9 0 0 1 2
.............................................................................................................GCCCGATGTCCGAAGTCCTTG......................................................................................................................... 21 0 5 0.60 3 0 3 0 0 0
.............................................................................................................................................................................................................................CGATGACCTTGGTCCGATGTCC........ 22 0 2 0.50 1 0 1 0 0 0
.........................................................................................................................................................................................................................GCCCCGACGACCTTGGTCTGA............. 21 3 2 0.50 1 1 0 0 0 0
.............................................................................................................................................................................................CGGCCCGATGTCCGATGTCCT......................................... 21 0 12 0.42 5 3 0 2 0 0
........................................................................................................CCTCGGCCCGATGTCCGAAGT.............................................................................................................................. 21 0 5 0.40 2 1 0 1 0 0
......................................................................................................................................................................................................GTCCGATGTCCTTGGCCCATC................................ 21 0 9 0.33 3 2 1 0 0 0
..............................................................................................................CCCGATGTCCGAAGTCCTTGG........................................................................................................................ 21 0 6 0.33 2 2 0 0 0 0
...............................................................................................................................TTGGCCCACCCCCGATGACC........................................................................................................ 20 0 3 0.33 1 1 0 0 0 0
................................................................................................................................TGGCCCACCCCCGATGACCTCG..................................................................................................... 22 0 3 0.33 1 0 0 1 0 0
.......................................................................................................................................................................................................TCCGATGTCCTTGGCCCATCC............................... 21 0 9 0.33 3 2 1 0 0 0
..............................................................................................................................................................TCCGACGTCCTTGGCCCATCC........................................................................ 21 0 19 0.32 6 3 3 0 0 0
............................................................................TCCGACGTCCTTGGCCCATCC.......................................................................................................................................................... 21 0 19 0.32 6 3 3 0 0 0
.....................................................................................................................................................................................................................................TTGGTCCGGTGTCCGACGTCC. 21 1 4 0.25 1 1 0 0 0 0
......................................................................................................................................................................................................................................TGGTCCGATGTCTGACGTCCT 21 1 4 0.25 1 1 0 0 0 0
....................................................................................................................................................................................................................................CTTGGTCCGATGTCCGACGTC.. 21 0 20 0.25 5 2 2 0 0 1
....................................................................................................................................................................................................ATGTCCGATGTCCTTGGCCCAT................................. 22 0 9 0.22 2 0 2 0 0 0
........................................................................................................CCTCGGCCCGATGTCCGAATT.............................................................................................................................. 21 1 5 0.20 1 0 0 1 0 0
..........................................................................................................TCGGCCCGATGTCCGAAGT.............................................................................................................................. 19 0 5 0.20 1 1 0 0 0 0
............................................................................................................GGCCCGATGTCCGAAGTCCTT.......................................................................................................................... 21 0 5 0.20 1 1 0 0 0 0
.....................................................................................................................................................................................................................................TTGGTCCGATGTACGACGTCC. 21 1 5 0.20 1 1 0 0 0 0
........................................................................................................CCTCGGCCCGATGTCCGAAGTCCTTGG........................................................................................................................ 27 0 5 0.20 1 1 0 0 0 0
..........................................................................................................TCGGCCCGATGTCCGAAGTC............................................................................................................................. 20 0 5 0.20 1 1 0 0 0 0
..........................................................................................................TCGGCCCGATGTCCGAAGTCC............................................................................................................................ 21 0 5 0.20 1 1 0 0 0 0
........................................................................................................................................................................................................CCGATGTCCTTGGCCCATCC............................... 20 0 10 0.20 2 0 0 2 0 0
..........................................................................................................................................................................................................................CGCCGATGACCGTGGTCTGA............. 20 3 5 0.20 1 1 0 0 0 0
..........................................................................................................................................................................................CCTCGGCCCGATGTCCGATGT............................................ 21 0 11 0.18 2 2 0 0 0 0
..........................................................................................................................................................................................CCTCGGCCCGATGTCCGATGTC........................................... 22 0 11 0.18 2 1 0 0 1 0
.................................................................................................................GATGTCCGAAGTCCTTGGCCC..................................................................................................................... 21 0 6 0.17 1 0 0 1 0 0
...............................................................................................................CCGATGTCCGAAGTCCTTGGC....................................................................................................................... 21 0 6 0.17 1 1 0 0 0 0
.............................................................................CCGACGTCCTTGGCCCATCC.......................................................................................................................................................... 20 0 19 0.16 3 0 1 2 0 0
...........................................................................GTCCGACGTCCTTGGCCCATC........................................................................................................................................................... 21 0 19 0.16 3 3 0 0 0 0
.............................................................................................................................................................GTCCGACGTCCTTGGCCCATC......................................................................... 21 0 19 0.16 3 3 0 0 0 0
...............................................................................................................................................................CCGACGTCCTTGGCCCATCC........................................................................ 20 0 19 0.16 3 0 1 2 0 0
.......................................................................................................................................................................................................................................GGTCCGATGTCCGACGTCC. 19 0 13 0.15 2 2 0 0 0 0
.................................................................................................................................................................................................................................GACCTTGGTCCGATGTCCGAC..... 21 0 20 0.15 3 3 0 0 0 0
......................................................................................................................................................................................................GTCCGATGTCCTTGGCCCAT................................. 20 0 9 0.11 1 1 0 0 0 0
......................................................................................................................................................................................................GTCCGATGTCCTTGGCCCGTC................................ 21 1 9 0.11 1 1 0 0 0 0
.......................................................................................................................................................................................................TCCGATGTCCTTGGCCCGTCC............................... 21 1 9 0.11 1 1 0 0 0 0
.................................................................................................................................................................................................CCGATGTCCGATGTCCTTGGCCCATCC............................... 27 0 9 0.11 1 0 0 1 0 0
.....................................................................................................................................................................................................TGTCCGATGTCCTTGGCCCATC................................ 22 0 9 0.11 1 1 0 0 0 0
.................................................................................................................................................................................................CCGATGTCCGATGTCCTTGGCCCATCCC.............................. 28 0 9 0.11 1 1 0 0 0 0
............................................................................TCCGACGTCCTTGGCCCATC........................................................................................................................................................... 20 0 19 0.11 2 1 1 0 0 0
..............................................................................................................................................................TCCGACGTCCTTGGCCCATC......................................................................... 20 0 19 0.11 2 1 1 0 0 0
...........................................................................................................................................................................................................ATGTCCTTGGCGCGTCCCCG............................ 20 2 10 0.10 1 1 0 0 0 0
...............................................................................................................CCGATGTCCGAAGTCCTTGA........................................................................................................................ 20 1 10 0.10 1 1 0 0 0 0
........................................................................................................................................................................................................CCGATGTCCTTGGCCCATC................................ 19 0 10 0.10 1 1 0 0 0 0
.................................................................................................................................................................................................CCGATGTCCGATGTCCTTGTC..................................... 21 1 10 0.10 1 0 0 1 0 0
.................................................................................................................................................................................................CCGATGTCCGATGTCCTTGGCCCA.................................. 24 0 10 0.10 1 0 1 0 0 0
...................................................................................................................................................................................................................................CCTTGGTCCGATGTCCGACGTC.. 22 0 20 0.10 2 0 0 0 1 1
................................................................................................................................................................................................CCCGATGTCCGATGTCCTTGGC..................................... 22 0 10 0.10 1 1 0 0 0 0
..............................................................................................................................................................................................GGCCCGATGTCCGATGTCCTT........................................ 21 0 12 0.08 1 1 0 0 0 0
................................................................................................................................................................................................CCCGATTTCCGATGTCCTTGG...................................... 21 1 12 0.08 1 1 0 0 0 0
................................................................................................................................................................................................CCCGATGTCCGATGTCCTCGG...................................... 21 1 12 0.08 1 0 0 1 0 0
.............................................................................................................................................................................................CGGCCCGATGTCTGATGTCCT......................................... 21 1 12 0.08 1 1 0 0 0 0
.............................................................................................................................................................................................CGGCCCGATGTCCGATGTCCTT........................................ 22 0 12 0.08 1 1 0 0 0 0
...................................................................................................................................................................................................GGTGTCCGATGTCCTTGGCCC................................... 21 1 12 0.08 1 1 0 0 0 0
.............................................................................................................................................................................................CGGCCCGATGTCCGATGTCC.......................................... 20 0 12 0.08 1 0 0 1 0 0
..........................................................................................................................................................................................CCTCGGCCCGATGGCCGATGTC........................................... 22 1 12 0.08 1 1 0 0 0 0
................................................................................................................................................................................................CCCGATGTCCGATGTCCTTG....................................... 20 0 12 0.08 1 0 1 0 0 0
............................................................................................................................................................................................TCGGCCCGATGTCCGATGTC........................................... 20 0 12 0.08 1 1 0 0 0 0
.................................................................................................................................................................................................CCGATGTCCGATGTCCTTG....................................... 19 0 12 0.08 1 0 1 0 0 0
................................................................................................................................................................................................CCCGATGTCCGATGTCCTT........................................ 19 0 12 0.08 1 0 0 1 0 0
........................................................................................................................................................................................................................................GTCCGATGTCCGACGTCCT 19 0 12 0.08 1 1 0 0 0 0
............................................................................................................................................................................................TCGGCCCGATGTCCGATGTCC.......................................... 21 0 12 0.08 1 1 0 0 0 0
..............................................................................................................................................................................................GGCCCGATGTCCGATGTCC.......................................... 19 0 12 0.08 1 1 0 0 0 0
..............................................................................................................................................................................................GGCCCGATGTCCGATGTCCT......................................... 20 0 12 0.08 1 1 0 0 0 0
..............................................................................................................................................................................................GGCCCGATGTCCGATGTTCTT........................................ 21 1 14 0.07 1 0 0 1 0 0
.............................................................................................................................................................................................CGGCCCGATGTCCGATTTCCG......................................... 21 2 14 0.07 1 0 0 1 0 0
................................................................................................................................................................................................CACGATGTCCGATGTCCTTTG...................................... 21 2 15 0.07 1 0 0 1 0 0
.................................................................................CGTCCTTGGCCCATCCCCGATG.................................................................................................................................................... 22 0 17 0.06 1 0 0 1 0 0
...................................................................................................................................................................CGTCCTTGGCCCATCCCCGATG.................................................................. 22 0 17 0.06 1 0 0 1 0 0
...............................................................................................................................................................CCGACGTCCTTGGCACATCCCCGA.................................................................... 24 1 18 0.06 1 0 1 0 0 0
.............................................................................CCGACGTCCTTGGCACATCCCCGA...................................................................................................................................................... 24 1 18 0.06 1 0 1 0 0 0
...............................................................................................................................................................CCGACGTCCTTGGCCCATCCCCGA.................................................................... 24 0 18 0.06 1 0 1 0 0 0
.............................................................................CCGACGTCCTTGGCCCATCCCCGA...................................................................................................................................................... 24 0 18 0.06 1 0 1 0 0 0
................................................................................................................................................................CGACGTCCTTGGCCCATCCCC...................................................................... 21 0 19 0.05 1 1 0 0 0 0
.............................................................................................................................................................GTCCGACGTCCTGGGCCCATC......................................................................... 21 1 19 0.05 1 1 0 0 0 0
...........................................................................GTCCGACGTCCTGGGCCCATC........................................................................................................................................................... 21 1 19 0.05 1 1 0 0 0 0
..................................................................................................................................................................................................................................ACCTTGGTCCGATGTCCGACGT... 22 0 19 0.05 1 0 1 0 0 0
..............................................................................CGACGTCCTTGGCCCATCCCC........................................................................................................................................................ 21 0 19 0.05 1 1 0 0 0 0
...................................................................................................................................................................................................................................CCTTGATCCGAGGTCCGACGT... 21 2 20 0.05 1 0 0 0 1 0
......................................................................................................................................................................CCTTGGCCCATCCCCGATGAC................................................................ 21 0 20 0.05 1 1 0 0 0 0
...............................................................................................CCCCGATGACCTCGGCCCGAT....................................................................................................................................... 21 0 20 0.05 1 1 0 0 0 0
..................................................................................................................................................................................................................................ACCTTGGTCCGATGTCCGACG.... 21 0 20 0.05 1 0 1 0 0 0
........................................................................................................................................................................TTGGCCCATCCCCGATGACCT.............................................................. 21 0 20 0.05 1 1 0 0 0 0
............................................................................CCCGACGTCCTTGGCCCATCC.......................................................................................................................................................... 21 1 20 0.05 1 0 0 1 0 0
...............................................................................................CCCCGGTGACCTCGGCCCGGTG...................................................................................................................................... 22 2 20 0.05 1 1 0 0 0 0
..................................................................................GACCTTGGCCCATCCCCGATGAC.................................................................................................................................................. 23 1 20 0.05 1 1 0 0 0 0
....................................................................................................................................................................................................................................CTTGGTCCGATGGCCGACGTC.. 21 1 20 0.05 1 1 0 0 0 0
.................................................................................................................................................................................CCCCGATGACCTCGGCCCGAT..................................................... 21 0 20 0.05 1 1 0 0 0 0
.................................................................................................................................................................................CCCCGGTGACCTCGGCCCGGTG.................................................... 22 2 20 0.05 1 1 0 0 0 0
.......................................................................................................................................................................................................TCCGATGTCCTTGGCCCATGC............................... 21 1 20 0.05 1 0 0 1 0 0
...........................................................................................................................................................................................................................CCCGATGACCTTGGTCAGATGTCCG....... 25 1 20 0.05 1 0 1 0 0 0
..............................................................................................................................................................CCCGACGTCCTTGGCCCATCC........................................................................ 21 1 20 0.05 1 0 0 1 0 0
..................................................................................................................................................................................................................................ACCTTGGTCCGATGTCCGACTT... 22 1 20 0.05 1 0 0 1 0 0
.............................................................................................................................................................................................................GACCTTGGCCCATCCCCGATGAC....................... 23 1 20 0.05 1 1 0 0 0 0
.......................................................................................................................................................................................................................................GGTCCGATGTCCGACGTC.. 18 0 20 0.05 1 1 0 0 0 0
......................................................................................TTGGCCCATCCCCGATGACCT................................................................................................................................................ 21 0 20 0.05 1 1 0 0 0 0
...........................................................................................................................................................ATGTCCGACGTCCTTGGCCCA........................................................................... 21 0 20 0.05 1 1 0 0 0 0
...................................................................................................................................................................................................................................CCTTGGTCCGATATCCGACGT... 21 1 20 0.05 1 1 0 0 0 0
....................................................................................................................................................................................TGATGACCTCGGCCCGATG.................................................... 19 1 20 0.05 1 0 1 0 0 0
.................................................................................................................................................................................................................TTGGCCCATCCCCGATGACCT..................... 21 0 20 0.05 1 1 0 0 0 0
.................................................................................CGTCCTTGGCCCATCCCCGAGC.................................................................................................................................................... 22 2 20 0.05 1 0 0 1 0 0
..................................................................................................TGATGACCTCGGCCCGATG...................................................................................................................................... 19 1 20 0.05 1 0 1 0 0 0
...................................................................................................................................................................CGTCCTTGGCCCATCCCCGAGC.................................................................. 22 2 20 0.05 1 0 0 1 0 0
............................................................................TCCGACGTCCTTCGCCCATCC.......................................................................................................................................................... 21 1 20 0.05 1 1 0 0 0 0
.........................................................................ATGTCCGACGTCCTTGGCCCA............................................................................................................................................................. 21 0 20 0.05 1 1 0 0 0 0
.................................................................................................................................................................................................................................TACCTTGGTCCGATGTCCGACG.... 22 1 20 0.05 1 1 0 0 0 0
..................................................................................................................................................................................................................................ACCTTGGTCCGATGTCCGAC..... 20 0 20 0.05 1 1 0 0 0 0
...................................................................................................................................................................................................................................CCTTGGTCCGGTGTCCGACG.... 20 1 20 0.05 1 1 0 0 0 0
..................................................................................................................................GCCCCCCCCCAATGACCCCG..................................................................................................... 20 3 20 0.05 1 1 0 0 0 0
..............................................................................................................................................................TCCGACGTCCTTCGCCCATCC........................................................................ 21 1 20 0.05 1 1 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droAna3 scaffold_13248:850550-850800 + dan_1496 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAGGAACCGGGTAAAAAGCTACAGGAGCCTGGTTACAGGCTGCAGGAACCGG-GTAGGGGCTACTGGAGCCGGGCTACAGGCTTCAGGAACCGGGTGGGGGCTACTGGAGCCCGGATACAGGCTGCAGG---AACCGGGTAGGGGCTACTGGAGCCGGGCTACAGGCTACAGGAACCGG-GTAGGGGCTACTGGAACCAGGCTACAGGCTGCAGGA
droBip1 scf7180000395922:39260-39467 + ----------------------------------------CAGGCTACGG-------GCTACAGGCTCCGATGTACAGCCTGCGGGCTACGGCCTACGGGTTACAGGATACGGGATACTGGCTACGGCTACAGCGTACAGGCTACGGAATACTGGCTACGGCATGTATGCCGTACGGACTACGGGCTACGGAATACTGGCTACGGCATACAGCCTACGGGCTACGGCTTACTGGCTAC-GGCTACTGGCTACGGCT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droAna3
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAGGAACCGGGTAAAAAGCTACAGGAGCCTGGTTACAGGCTGCAGGAACCGG-GTAGGGGCTACTGGAGCCGGGCTACAGGCTTCAGGAACCGGGTGGGGGCTACTGGAGCCCGGATACAGGCTGCAGG---AACCGGGTAGGGGCTACTGGAGCCGGGCTACAGGCTACAGGAACCGG-GTAGGGGCTACTGGAACCAGGCTACAGGCTGCAGGASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.......................................................................................................................................................................................................................CCGG-GTAGGGGCTACTGGAAC...................2111.001010000
.................................................................................................................................ACCGGGTGGGGGCTACTGGAGCCC.......................................................................................................2421.002000002
.................................................................................................................................................................GCTGCAGG---AACCGGGTAGGGGC......................................................................22190.5310000019
..............................................................................GCTGCAGGAACCGG-GTAGGGGC...........................................................................................................................................................22190.5310000019
..............................................................................................................................................................................................................CTACAGGAACCGG-GTAGGGGC............................21100.505210002
...................................................................................................GCTACTGGAGCCGGGCTACAG........................................................................................................................................21200.459000018
....................................................................................................................................................................GCAGG---AACCGGGTAGGGGC......................................................................19190.377000016
.................................................................................GCAGGAACCGG-GTAGGGGC...........................................................................................................................................................19190.377000016
...............................................................................................................................GAACCGGGTGGGGGCTACTGGAGCC........................................................................................................2530.331000001
................................................................................................................................AACCGGGTGGGGGCTACTGGAGCC........................................................................................................2430.331000001
.............................................................................GGCTGCAGGAACCGG-GTAGGGGC...........................................................................................................................................................23190.326000006
................................................................................................................................................................GGCTGCAGG---AACCGGGTAGGGGC......................................................................23190.326000006
..............................................................................................................................................................................................................CTACAGGAACCGG-GTAGGGG.............................20100.303100002
.......................................................................................................................................................................................................CTACAGGCTACAGGAACCGG-G...................................21100.303000003
.................................................................................................................................ACCGGGTGGGGGCTACTGGAAA.........................................................................................................2240.251000001
...............................................................................................................................................................................................................TACAGGAACCGG-GTAGGGGCT...........................2190.222110000
..................................................................................................................................................................CTGCAGG---AACCGGGTAGGG........................................................................19190.214210010
..................................................................................................................................................................CTGCAGG---AACCGGGTAGG.........................................................................18190.214400000
...............................................................................CTGCAGGAACCGG-GTAGGG.............................................................................................................................................................19190.214210010
...............................................................................CTGCAGGAACCGG-GTAGG..............................................................................................................................................................18190.214400000
..................................................................................................................................................................CTGCAGG---AACCGGGTAGGGG.......................................................................20190.214110020
...............................................................................CTGCAGGAACCGG-GTAGGGG............................................................................................................................................................20190.214110020
...............................................................................................................................................................................................................TACAGGAACCGG-GTAGGGTT............................20100.202000002
................................................................................................................................................................................................................ACAGGAACCGG-GTAGGGGC............................19100.202000011
......................................................................................................................................................................................................GCTACAGGCTACAGGAACCGG-....................................21100.202100001
...................................................................................................................TACAGGCTTCAGGAACCGGGT........................................................................................................................2160.171000001
..................................................................................................................CTACAGGCTTCAGGAACCGGG.........................................................................................................................2160.171000001
..................................................................................................................CTACAGGCTTCAGGAACCGG..........................................................................................................................2060.171000001
...............................................................................CTGCAGGAACCGG-GTAGGGGC...........................................................................................................................................................21190.163120000
.................................................................................................................................................................GCTGCAGG---AACCGGGTAGGGG.......................................................................21190.163000012
..................................................................................................................................................................CTGCAGG---AACCGGGTAGGGGC......................................................................21190.163120000
..............................................................................GCTGCAGGAACCGG-GTAGGGG............................................................................................................................................................21190.163000012
.........................................................................................................................................................................................CTACTGGAGCCGGGCTACAGG..................................................21200.153100002
....................................................................................................CTACTGGAGCCGGGCTACAGG.......................................................................................................................................21200.153100002
...............................................................................................................................................................................................................TACAGGAACCGG-GTAGGGGCTT..........................2290.111000001
........................................................................................................................................................................................................TACAGGCTACAGGAACCGG-GTAGGGGC............................2790.111000001
...................................................................................................................................................................TGCAGG---AACCGGGTAGGGG.......................................................................19190.112000020
...................................................................................................................................................................TGCAGG---AACCGGGTAGGGGC......................................................................20190.112000002
................................................................................TGCAGGAACCGG-GTAGGGGC...........................................................................................................................................................20190.112000002
................................................................................TGCAGGAACCGG-GTAGGGG............................................................................................................................................................19190.112000020
...............................................................................................................................................................................CGGGTAGGGGCTACTGGAGC.............................................................20200.102101000
.......................................................................................................................................................................................................CTACAGGCTACAGGAACCGG-....................................20100.101100000
...........................................................................................................................................................................................ACTGGAGCCGGGCTACAGGC.................................................20200.102100010
...........................................................................................................................................................................................ACTGGAGCCGGGCTACAGG..................................................19200.102100001
..............................................................................................................................................................................................................CTACAGGAACCGG-GTAGGGGT............................21100.101000010
......................................................................................................ACTGGAGCCGGGCTACAGG.......................................................................................................................................19200.102100001
.............................................................................................................................................................................................................GCTACAGGAACCGG-GTAGGGG.............................21100.101000010
.....................................................................................GAACCGG-GTAGGGGCTACTGGAGCC.................................................................................................................................................25200.102000002
..............................................................................................................................................................................................................CTACAGGAACCGG-GTAGGG..............................19100.101100000
.................................................................................................................................................................GCTGCAGG---AACCGGGTAGGGGT......................................................................22200.102000002
........................................................................................................................................................................G---AACCGGGTAGGGGCTACTGGAGCC............................................................25200.102000002
............................................................................................................................................................TACAGGCTGCAGG---AACCGGGT............................................................................21200.102000002
..............................................................................................................................................................................................................CTACAGGAACCGG-GTAGGGGCC...........................22100.101010000
............................................................................................................................................................................................................GGCTACAGGAACCGG-GTAGGGGC............................23100.101000001
.............................................................................................................................................................................................................GCTACAGGAACCGG-GTAGG...............................19100.101100000
.............................................................................................................................................................................................................GCTACAGGAACCGG-GTAGGGGC............................22100.101000001
.............................................................................................................................................................ACAGGCTGCAGG---AACCGGG.............................................................................19200.102200000
......................................................................................................ACTGGAGCCGGGCTACAGGC......................................................................................................................................20200.102100010
..........................................................................ACAGGCTGCAGGAACCGG-G..................................................................................................................................................................19200.102200000
...........................................................................................G-GTAGGGGCTACTGGAGT..................................................................................................................................................18200.102000002
.................................................................................................................................................................................GGTAGGGGCTACTGGAGT.............................................................18200.102000002
.........................................................................................CGG-GTAGGGGCTACTGGAGC..................................................................................................................................................20200.102101000
.........................................................................................................................................................................................................ACAGGCTACAGGAACCGG-G...................................19110.091100000
........................................................................................................................................................................................................TACAGGCTACAGGAACCGG-G...................................20110.091100000
..................................................................................................................................................................CTGCAGG---AACCGGGTAGGGGCT.....................................................................22180.061100000
...............................................................................CTGCAGGAACCGG-GTAGGGGCT..........................................................................................................................................................22180.061100000
.............................................................................GGCTGCAGGAACCGG-GTAGGGGCT..........................................................................................................................................................24180.061000001
................................................................................................................................................................GGCTGCAGG---AACCGGGTAGGGGCT.....................................................................24180.061000001
..............................................................................................................................................................CAGGCTGCAGG---AACCGGGTAGGG........................................................................23190.051000001
................................................................................................................................................................GGCTGCAGG---AACCGGGTAGGG........................................................................21190.051000001
..............................................................................GCTGCAGGAACCGG-GTAGGG.............................................................................................................................................................20190.051001000
.................................................................................................................................................................GCTGCAGG---AACCGGGTAGG.........................................................................19190.051000001
.................................................................................GCAGGAACCGG-GTAGGGG............................................................................................................................................................18190.051000001
..............................................................................................................................................................CAGGCTGCAGG---AACCGGGTAGGGG.......................................................................24190.051000001
...........................................................................CAGGCTGCAGGAACCGG-GTAGGGG............................................................................................................................................................24190.051000001
................................................................................................................................................................GGCTGCAGG---AACCGGGTAGGGG.......................................................................22190.051000001
.............................................................................GGCTGCAGGAACCGG-GTAGGGG............................................................................................................................................................22190.051000001
.................................................................................................................................................................GCTGCAGG---AACCGGGTAGGG........................................................................20190.051001000
.................................................................................................................................................................GCTGCAGG---AACCGGGTAGGT........................................................................20190.051000010
...........................................................................CAGGCTGCAGGAACCGG-GTAGGG.............................................................................................................................................................23190.051000001
.............................................................................GGCTGCAGGAACCGG-GTAGGG.............................................................................................................................................................21190.051000001
....................................................................................................................................................................GCAGG---AACCGGGTAGGGG.......................................................................18190.051000001
...........................................................................CAGGCTGCAGGAACCGG-GTAG...............................................................................................................................................................21190.051100000
..............................................................................................................................................................CAGGCTGCAGG---AACCGGGTAG..........................................................................21190.051100000
..............................................................................GCTGCAGGAACCGG-GTAGG..............................................................................................................................................................19190.051000001
..............................................................................GCTGCAGGAACCGG-GTAGGT.............................................................................................................................................................20190.051000010
...........................................................................................G-GTAGGGGCTACTGGAGCCGGGC.............................................................................................................................................23200.051000001
....................................................................................................................................................................................AGGGGCTACTGGAGCCGGGCTT......................................................22200.051000001
..................................................................................................................................................................................GTAGGGGCTACTGGAGCCGGT.........................................................21200.051100000
........................................................................................................................................................................................GCTACTGGAGCCGGGCTACAGG..................................................22200.051000001
................................................................................................GGGGCTACTGGAGCCGGGCTACAGG.......................................................................................................................................25200.051100000
..............................................................................................................................................................................CCGGGTAGGGGCTACTGGAGC.............................................................21200.051100000
....................................................................................................CTACTGGAGCCGGGCTACA.........................................................................................................................................19200.051000001
...............................................................................CTGCAGGAACCGG-GTAGGGGCTT.........................................................................................................................................................23200.051100000
...................................................................................................GCTACTGGAGCCGGGCTACAGG.......................................................................................................................................22200.051000001
...................................................................................AGGAACCGG-GTAGGGGCTACT.......................................................................................................................................................21200.051100000
........................................................................................................................................................................................GCTACTGGAGCCGGGCTACAG...................................................21200.051000010
...........................................................................CAGGCTGCAGGAACCGG-GTA................................................................................................................................................................20200.051100000
.........................................................................................................................................................................................CTACTGGAGCCGGGCTACA....................................................19200.051000001
...............................................................................................................................................................................CGGGTAGGGGCTACTGGAGCC............................................................21200.051100000
.....................................................................................................................................................................................GGGGCTACTGGAGCCGGGC........................................................19200.051000001
.................................................................................................................................................................GCTGCAGG---AACCGGGTAGGTT.......................................................................21200.051100000
................................................................................................GGGGCTACTGGAGCCGGGC.............................................................................................................................................19200.051000001
.........................................................................................CGG-GTAGGGGCTACTGGAGCC.................................................................................................................................................21200.051100000
............................................................................................................................................................TACAGGCTGCAGG---AACCGG..............................................................................19200.051000001
..............................................................................................TAGGGGCTACTGGAGCCGGGCT............................................................................................................................................22200.051000001
...................................................................................................................................................................................TAGGGGCTACTGGAGCCGGGCT.......................................................22200.051000001
.........................................................................TACAGGCTGCAGGAACCGG-...................................................................................................................................................................19200.051000001
.....................................................................................................................................................................................GGGGCTACTGGAGCCGGGCTACAGG..................................................25200.051100000
....................................................................................................................................................................................AGGGGCTACTGGAGCCGGGCTACA....................................................24200.051100000
......................................................................................................................................................................AGG---AACCGGGTAGGGGCTACT..................................................................21200.051100000
..............................................................................................................................................................CAGGCTGCAGG---AACCGGGTA...........................................................................20200.051100000
.............................................................................................GTAGGGGCTACTGGAGCCGGT..............................................................................................................................................21200.051100000
.................................................................................................................................................................................GGTAGGGGCTACTGGAGCCGGGC........................................................23200.051000001
..............................................................................GCTGCAGGAACCGG-GTAGGTT............................................................................................................................................................21200.051100000
.......................................................................................................CTGGAGCCGGGCTACAGGC......................................................................................................................................19200.051000001
..................................................................................................................................................................CTGCAGG---AACCGGGTAGGGGCTT....................................................................23200.051100000
..................................................................................................................................................................................................................AGGAACCGG-GTAGGGGCTACT........................21200.051100000
............................................................................................................................................................................................CTGGAGCCGGGCTACAGGC.................................................19200.051000001
...................................................................................................GCTACTGGAGCCGGGCTAC..........................................................................................................................................19200.051100000
.........................................................................................................................................................................................CTACTGGAGCCGGGCTACAGGC.................................................22200.051010000
........................................................................................................................................................................................GCTACTGGAGCCGGGCTAC.....................................................19200.051100000
........................................................................................CCGG-GTAGGGGCTACTGGAGC..................................................................................................................................................21200.051100000
................................................................................................................................................................................GGGTAGGGGCTACTGGAGCCGGGC........................................................24200.051000001
....................................................................................................CTACTGGAGCCGGGCTACAGGC......................................................................................................................................22200.051010000
...............................................................................................AGGGGCTACTGGAGCCGGGCTACA.........................................................................................................................................24200.051100000
.........................................................................TACAGGCTGCAGGAACCGG-G..................................................................................................................................................................20200.051100000
..........................................................................................GG-GTAGGGGCTACTGGAGCCGGGC.............................................................................................................................................24200.051000001
............................................................................................................................................................TACAGGCTGCAGG---AACCGGG.............................................................................20200.051100000
...............................................................................................AGGGGCTACTGGAGCCGGGCTT...........................................................................................................................................22200.051000001
droBip1
----------------------------------------CAGGCTACGG-------GCTACAGGCTCCGATGTACAGCCTGCGGGCTACGGCCTACGGGTTACAGGATACGGGATACTGGCTACGGCTACAGCGTACAGGCTACGGAATACTGGCTACGGCATGTATGCCGTACGGACTACGGGCTACGGAATACTGGCTACGGCATACAGCCTACGGGCTACGGCTTACTGGCTAC-GGCTACTGGCTACGGCTSizeHit CountTotal NormTotal
No Reads

Generated: 05/18/2015 at 02:12 AM