ID:

dan_1495

 Coordinate:

scaffold_13248:849324-849474 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-17.9 -17.9 -17.9

Flybase annnotation

exon [dana_GLEANR_6470:1]; CDS [Dana\GF22506-cds]; intron [Dana\GF22506-in]

No Repeatable elements found

mature
  1. scaffold_13248:842969-842990 -
  2. scaffold_13248:843174-843195 -
  3. scaffold_13248:843534-843555 -
  4. scaffold_13248:843739-843760 -
  5. scaffold_13248:843903-843924 -
  6. scaffold_13248:844058-844079 -
  7. scaffold_13248:845201-845222 -
  8. scaffold_13248:845438-845459 -
  9. scaffold_13248:845684-845705 -
  10. scaffold_13248:846012-846033 -
  11. scaffold_13248:846085-846106 -
  12. dan_1495  scaffold_13248:849310-849331 +
  13. dan_1495  scaffold_13248:849433-849454 +
  14. dan_1496  scaffold_13248:850628-850649 +
  15. dan_1496  scaffold_13248:850710-850731 +
  16. scaffold_13248:850792-850813 +
  17. scaffold_13248:850915-850936 +
  18. scaffold_13248:851277-851298 +
  19. dan_1497  scaffold_13248:851441-851462 +
star
  1. scaffold_13248:843010-843030 -
  2. scaffold_13248:845038-845058 -
  3. scaffold_13248:845242-845262 -
  4. scaffold_13248:846208-846228 -
  5. dan_1495  scaffold_13248:849393-849413 +
  6. scaffold_13248:849639-849659 +
  7. scaffold_13248:849762-849782 +
  8. scaffold_13248:850752-850772 +
  9. scaffold_13248:850998-851018 +
  10. scaffold_13248:851606-851626 +

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
AGAAACTGGGCAGGAGCTACTGGAGCCGGGCTACAGGCTGCAGGAACCGGGTAGGGGCTACTGGAGCCAGGCTACAGGCTGCAGGAACCCGGTAGGGGCTACTGGAGCCGGGCTACAGGCTACAGGAACCGGGTAGGGGCTACTGGAGCCAGGCTACAGGCTGCAGGAACCGGGTAGGGGCTATTGGAGCCGGGCTACAGGCTGCAGGAACTGGGTAGGGGCTACTGGAGCCGGGCTACAGGCTGCAGGAA
***********************************************************************************************************************((((.....((((..........(((.((((........)))).)))...))))))))....********************************************************************** 		Read size # Mismatch Hit Count Total Norm Total V106
head
 M044
female body
 V105
male body		 M058
embryo
 V055
head
 V039
embryo
..................................................................................................................................................................................................................CTGGGTAGGGGCTACTGGAGC.................... 21 0 3 1.00 3 1 2 0 0 0 0
.........GCAGGAGCTACTGGAGCCGGGC............................................................................................................................................................................................................................ 22 0 19 0.79 15 15 0 0 0 0 0
....................................GCTGCAGGAACCGGGTAGGGGC................................................................................................................................................................................................. 22 0 19 0.53 10 9 0 1 0 0 0
...............................................................................................................................................................GCTGCAGGAACCGGGTAGGGGC...................................................................... 22 0 19 0.53 10 9 0 1 0 0 0
..........................................................................................................................................................................CGGGTAGGGGCTATTGGAGCC............................................................ 21 0 2 0.50 1 0 0 1 0 0 0
..........................................................................................................................................................................CTGGTATGGGCTATTGGAGCC............................................................ 21 2 2 0.50 1 0 0 0 1 0 0
.......................................................................................................................CTACAGGAACCGGGTAGGGGC............................................................................................................... 21 0 10 0.50 5 2 2 0 1 0 0
.................................................................................................GCTACTGGAGCCGGGCTACAG..................................................................................................................................... 21 0 20 0.45 9 8 0 1 0 0 0
............................................................................................................................................................................................................................GCTACTGGAGCCGGGCTACAG.......... 21 0 20 0.45 9 8 0 1 0 0 0
...............GCTACTGGAGCCGGGCTACAG....................................................................................................................................................................................................................... 21 0 20 0.40 8 8 0 0 0 0 0
.........GCAGGAGCTACTGGAGCCGGG............................................................................................................................................................................................................................. 21 0 19 0.37 7 4 1 1 0 0 1
.......................................GCAGGAACCGGGTAGGGGC................................................................................................................................................................................................. 19 0 19 0.37 7 6 0 1 0 0 0
..................................................................................................................................................................GCAGGAACCGGGTAGGGGC...................................................................... 19 0 19 0.37 7 6 0 1 0 0 0
.................................................................................................................................................................................................................ACTGTGTAGGGGCTACTGGAGCC................... 23 1 3 0.33 1 1 0 0 0 0 0
...................................................................................................................................................................................GCTATTGGAGCCGGGCTACA.................................................... 20 0 3 0.33 1 1 0 0 0 0 0
........................................................................................................................................................................................................GCTGCAGGAACTGGGTAGG................................ 19 0 6 0.33 2 1 1 0 0 0 0
........................................................................................................................................................................................................GCTGCAGGAACTGGGTAGGGG.............................. 21 0 6 0.33 2 0 2 0 0 0 0
...........................................................................................................................................................................................................GCAGGAACTGGGTAGGGGC............................. 19 0 6 0.33 2 2 0 0 0 0 0
............................................................................................................................................................................GGTAGGGGCTATTGGAGCCGG.......................................................... 21 0 6 0.33 2 0 2 0 0 0 0
..............................................................................................................................................................................................CGGGCTACAGGCTGCAGGAACT....................................... 22 0 3 0.33 1 0 0 0 0 1 0
......TGGGCAGGAGCTACTGGAGCC................................................................................................................................................................................................................................ 21 0 19 0.32 6 4 2 0 0 0 0
...................................GGCTGCAGGAACCGGGTAGGGGC................................................................................................................................................................................................. 23 0 19 0.32 6 6 0 0 0 0 0
..............................................................................................................................................................GGCTGCAGGAACCGGGTAGGGGC...................................................................... 23 0 19 0.32 6 6 0 0 0 0 0
...........AGGAGCTACTGGAGCCGGGC............................................................................................................................................................................................................................ 20 0 19 0.32 6 4 1 0 0 0 1
.......................................................................................................................CTACAGGAACCGGGTAGGGG................................................................................................................ 20 0 10 0.30 3 2 1 0 0 0 0
.............................................................................GCTGCAGGAACCCGGTAGGGGC........................................................................................................................................................ 22 0 20 0.30 6 6 0 0 0 0 0
................................................................................................................CTACAGGCTACAGGAACCGGG...................................................................................................................... 21 0 10 0.30 3 3 0 0 0 0 0
.......................................................................CTACAGGCTGCAGGAACCCGG............................................................................................................................................................... 21 0 14 0.29 4 2 2 0 0 0 0
........................................................GCTACTGGAGCCAGGCTACA............................................................................................................................................................................... 20 0 4 0.25 1 0 0 0 0 1 0
.....................................................GGGGCTACTGGAGCCAGGCTA................................................................................................................................................................................. 21 0 4 0.25 1 0 1 0 0 0 0
..........................................................................................................................................GCTACTGGAGCCAGGCTACA............................................................................................. 20 0 4 0.25 1 0 0 0 0 1 0
............................................................................................................................................TACTGGAGCCAGGCTACAGGC.......................................................................................... 21 0 4 0.25 1 0 0 0 1 0 0
.......................................................................................................................................GGGGCTACTGGAGCCAGGCTA............................................................................................... 21 0 4 0.25 1 0 1 0 0 0 0
..........................................................TACTGGAGCCAGGCTACAGGC............................................................................................................................................................................ 21 0 4 0.25 1 0 0 0 1 0 0
........................................................................................................................TACAGGAACCGGGTAGGGGCT.............................................................................................................. 21 0 9 0.22 2 0 1 0 1 0 0
................................................................................................................................................................CTGCAGGAACCGGGTAGGG........................................................................ 19 0 19 0.21 4 0 2 1 1 0 0
................................................................................................................................................................CTGCAGGAACCGGGTAGG......................................................................... 18 0 19 0.21 4 0 4 0 0 0 0
................................................................................................................................................................CTGCAGGAACCGGGTAGGGG....................................................................... 20 0 19 0.21 4 0 1 2 1 0 0
.....................................CTGCAGGAACCGGGTAGG.................................................................................................................................................................................................... 18 0 19 0.21 4 0 4 0 0 0 0
............GGAGCTACTGGAGCCGGGC............................................................................................................................................................................................................................ 19 0 19 0.21 4 4 0 0 0 0 0
.....................................CTGCAGGAACCGGGTAGGG................................................................................................................................................................................................... 19 0 19 0.21 4 0 2 1 1 0 0
.....................................CTGCAGGAACCGGGTAGGGG.................................................................................................................................................................................................. 20 0 19 0.21 4 0 1 2 1 0 0
........................................................................................................................TACAGGAACCGGGTAGGGTT............................................................................................................... 20 2 10 0.20 2 2 0 0 0 0 0
...............................................................................................................GCTACAGGCTACAGGAACCGG....................................................................................................................... 21 0 10 0.20 2 1 1 0 0 0 0
.........................................................................................................................ACAGGAACCGGGTAGGGGC............................................................................................................... 19 0 10 0.20 2 1 0 1 0 0 0
........................................................................................................................................................................................................GCTGCAGGAACTGGGTAGGGGC............................. 22 0 6 0.17 1 1 0 0 0 0 0
..................................................................................................................................................................................................CTACAGGCTGCAGGAACTGG..................................... 20 0 6 0.17 1 0 1 0 0 0 0
........................................................................................................................................................................................................GCTGCAGGAGCTGGGTAGGGGC............................. 22 1 6 0.17 1 1 0 0 0 0 0
..........................................................................................................................................................................................................TGCAGGAACTGGGTAGGGTTT............................ 21 2 6 0.17 1 0 0 1 0 0 0
....................................................................................................................................................................................................ACAGGCTGCAGGAACTGGG.................................... 19 0 6 0.17 1 0 1 0 0 0 0
.........................................................................................................................................................................................................CTGCAGGAACTGGGTAGGGGC............................. 21 0 6 0.17 1 1 0 0 0 0 0
........................................................................................................................................................................................................GCTGCAGGAACTGGGTAG................................. 18 0 6 0.17 1 0 0 1 0 0 0
..............................................................................................................................................................................TAGGGGCTATTGGAGCCGGGTG....................................................... 22 2 6 0.17 1 1 0 0 0 0 0
.........................................................................................................................................................................................................CTGCAGGAACTGGGTAGGGT.............................. 20 1 6 0.17 1 1 0 0 0 0 0
.....................................................................................................................................................................................................CAGGCTGCAGGAACTGGGTAGGGGC............................. 25 0 6 0.17 1 1 0 0 0 0 0
............................................................................................................................................................................GGTAGGGGATATTGGAGCCGC.......................................................... 21 2 6 0.17 1 0 1 0 0 0 0
...........................................................................................................................................................................................................GCAGGAACTGGGTAGGGG.............................. 18 0 6 0.17 1 0 1 0 0 0 0
.........................................................................................................................................................................................................CTGCAGGAACTGGGTAGGGGCT............................ 22 0 6 0.17 1 0 1 0 0 0 0
.........................................................................................................................................................................................................CTGCAGGACCTGGGTAGGGGC............................. 21 1 6 0.17 1 0 1 0 0 0 0
...AACTGGGCAGGAGCTACTGGAGCC................................................................................................................................................................................................................................ 24 0 18 0.17 3 3 0 0 0 0 0
.....................................................................................................................................................................................................CAGGCTGCAGGAACTGGGTT.................................. 20 1 6 0.17 1 0 0 1 0 0 0
...................................................................................................................................................................................................................TGTGTAGGGGCTACTGGAGCC................... 21 1 6 0.17 1 1 0 0 0 0 0
....................................................................................................................................................................................................ACAGGCTGCAGGAACTGGGTA.................................. 21 0 6 0.17 1 0 1 0 0 0 0
....................................GCTGCAGGAACCGGGTAGGGG.................................................................................................................................................................................................. 21 0 19 0.16 3 2 0 1 0 0 0
.....CTGGGCAGGAGCTACTGGAGC................................................................................................................................................................................................................................. 21 0 19 0.16 3 3 0 0 0 0 0
................................................................................................................................................................CTGCAGGAACCGGGTAGGGGC...................................................................... 21 0 19 0.16 3 0 1 0 2 0 0
...............................................................................................................................................................GCTGCAGGAACCGGGTAGGGG....................................................................... 21 0 19 0.16 3 2 0 1 0 0 0
..........CAGGAGCTACTGGAGCCGGGC............................................................................................................................................................................................................................ 21 0 19 0.16 3 0 1 1 0 1 0
.....................................CTGCAGGAACCGGGTAGGGGC................................................................................................................................................................................................. 21 0 19 0.16 3 0 1 0 2 0 0
..................................................................................................CTACTGGAGCCGGGCTACAGG.................................................................................................................................... 21 0 20 0.15 3 2 1 0 0 0 0
................CTACTGGAGCCGGGCTACAGG...................................................................................................................................................................................................................... 21 0 20 0.15 3 2 1 0 0 0 0
.............................................................................................................................................................................................................................CTACTGGAGCCGGGCTACAGG......... 21 0 20 0.15 3 2 1 0 0 0 0
........................................................................TACAGGCTGCAGGAACCCGGTAGGGG......................................................................................................................................................... 26 0 15 0.13 2 2 0 0 0 0 0
.............GAGCTACTGGAGCCGGTCTAC......................................................................................................................................................................................................................... 21 1 8 0.13 1 0 1 0 0 0 0
...............................................................GAGCCAGGCTACAGGCTGCAG....................................................................................................................................................................... 21 0 8 0.13 1 0 1 0 0 0 0
.................................................................................................................................................GAGCCAGGCTACAGGCTGCAG..................................................................................... 21 0 8 0.13 1 0 1 0 0 0 0
........................................................................................................................TACAGGAACCGGGTAGGGGCTT............................................................................................................. 22 1 9 0.11 1 1 0 0 0 0 0
........................................................................................................................TACAGGAACCGGGTAGGGGTT.............................................................................................................. 21 1 9 0.11 1 0 0 1 0 0 0
......................................................................GCTACAGGCTGCAGGAACCCG................................................................................................................................................................ 21 0 18 0.11 2 2 0 0 0 0 0
.................................................................................................................TACAGGCTACAGGAACCGGGTAGGGGC............................................................................................................... 27 0 9 0.11 1 1 0 0 0 0 0
....................................GCTGCAGGAGCCGGGTAGGGGC................................................................................................................................................................................................. 22 1 19 0.11 2 2 0 0 0 0 0
.................................................................................................................................................................TGCAGGAACCGGGTAGGGG....................................................................... 19 0 19 0.11 2 0 0 2 0 0 0
........GGCAGGAGCTACTGGAGCCGGGC............................................................................................................................................................................................................................ 23 0 19 0.11 2 2 0 0 0 0 0
..........CAGGAGCTACTGGAGCCGGG............................................................................................................................................................................................................................. 20 0 19 0.11 2 0 1 1 0 0 0
...............................................................................................................................................................GCTGCAGGAGCCGGGTAGGGGC...................................................................... 22 1 19 0.11 2 2 0 0 0 0 0
......................................TGCAGGAACCGGGTAGGGG.................................................................................................................................................................................................. 19 0 19 0.11 2 0 0 2 0 0 0
.................................................................................................................................................................TGCAGGAACCGGGTAGGGGC...................................................................... 20 0 19 0.11 2 2 0 0 0 0 0
.............GAGCTACTGGAGCCGGGC............................................................................................................................................................................................................................ 18 0 19 0.11 2 2 0 0 0 0 0
...........AGGAGCTACTGGAGCCGGG............................................................................................................................................................................................................................. 19 0 19 0.11 2 0 2 0 0 0 0
......................................TGCAGGAACCGGGTAGGGGC................................................................................................................................................................................................. 20 0 19 0.11 2 2 0 0 0 0 0
.......................................................................................................................CTACAGGAACCGGGTAGGGGT............................................................................................................... 21 1 10 0.10 1 0 0 1 0 0 0
........................................................................................................................................................................................................GCTGCAGGAACTGGGTGGG................................ 19 1 10 0.10 1 0 1 0 0 0 0
................................ACAGGCTGCAGGAACCGGG........................................................................................................................................................................................................ 19 0 20 0.10 2 0 2 0 0 0 0
..............................................................................CTGCAGGAACCCGGTAGGGG......................................................................................................................................................... 20 0 20 0.10 2 0 1 0 0 0 1
...............................................CTGGTAGGGGCTACTGGAGCC....................................................................................................................................................................................... 21 1 20 0.10 2 0 0 0 2 0 0
...................................................................................................................................GGTAGGGGCTACTGGAGT...................................................................................................... 18 1 20 0.10 2 2 0 0 0 0 0
.................................................................................................................TACAGGCTACGGGAACCGGGTAGGG................................................................................................................. 25 1 10 0.10 1 1 0 0 0 0 0
..............................CTACAGGCTGCAGGAACCG.......................................................................................................................................................................................................... 19 0 20 0.10 2 0 2 0 0 0 0
....................................................................................................ACTGGAGCCGGGCTACAGG.................................................................................................................................... 19 0 20 0.10 2 1 1 0 0 0 0
.............................................................................................................................GAACCGGGTAGGGGCTACTGGAGCC..................................................................................................... 25 0 20 0.10 2 2 0 0 0 0 0
...............................................CGGGTAGGGGCTACTGGAGC........................................................................................................................................................................................ 20 0 20 0.10 2 0 1 0 0 0 1
...........................................................................................................................................................ACAGGCTGCAGGAACCGGG............................................................................. 19 0 20 0.10 2 0 2 0 0 0 0
...............................................................................................................................................................................................................................ACTGGAGCCGGGCTACAGG......... 19 0 20 0.10 2 1 1 0 0 0 0
.......................................................................................................................CTACAGGAACCGGGTAGGGGCC.............................................................................................................. 22 1 10 0.10 1 0 0 0 1 0 0
....................................................................................................ACTGGAGCCGGGCTACAGGC................................................................................................................................... 20 0 20 0.10 2 0 1 1 0 0 0
.......................................................................................................................CTACAGGAACCGGGTAGGG................................................................................................................. 19 0 10 0.10 1 0 1 0 0 0 0
..................ACTGGAGCCGGGCTACAGG...................................................................................................................................................................................................................... 19 0 20 0.10 2 1 1 0 0 0 0
........................................................................................CTGGTAGGGGCTACTGGAGCC.............................................................................................................................................. 21 1 20 0.10 2 0 0 0 2 0 0
.........................................................................................................................................................CTACAGGCTGCAGGAACCGGG............................................................................. 21 0 20 0.10 2 2 0 0 0 0 0
..........................................................................................GGTAGGGGCTACTGGAGT............................................................................................................................................... 18 1 20 0.10 2 2 0 0 0 0 0
......................................................................................................................GCTACAGGAACCGGGTAGGGG................................................................................................................ 21 0 10 0.10 1 0 0 1 0 0 0
.................................................GGTAGGGGCTACTGGAGT........................................................................................................................................................................................ 18 1 20 0.10 2 2 0 0 0 0 0
.....................................................................................................................................................................................................................GGTAGGGGCTACTGGAGT.................... 18 1 20 0.10 2 2 0 0 0 0 0
..............................CTACAGGCTGCAGGAACCGGG........................................................................................................................................................................................................ 21 0 20 0.10 2 2 0 0 0 0 0
................................................................................................................CTACAGGCTACAGGAACCGG....................................................................................................................... 20 0 10 0.10 1 0 1 0 0 0 0
.................................................................................................................................CTGGTAGGGGCTACTGGAGCC..................................................................................................... 21 1 20 0.10 2 0 0 0 2 0 0
..................ACTGGAGCCGGGCTACAGGC..................................................................................................................................................................................................................... 20 0 20 0.10 2 0 1 1 0 0 0
.................................................................................................................................CGGGTAGGGGCTACTGGAGC...................................................................................................... 20 0 20 0.10 2 0 1 0 0 0 1
...............................................................................................................................................................................................................................ACTGGAGCCGGGCTACAGGC........ 20 0 20 0.10 2 0 1 1 0 0 0
.....................................................................................................................GGCTACAGGAACCGGGTAGGGGC............................................................................................................... 23 0 10 0.10 1 1 0 0 0 0 0
......................................................................................................................GCTACAGGAACCGGGTAGG.................................................................................................................. 19 0 10 0.10 1 0 1 0 0 0 0
....................................GCTGCAGGAACCGGGTAGGGGT................................................................................................................................................................................................. 22 1 20 0.10 2 2 0 0 0 0 0
...............................TACAGGCTGCAGGAACCGG......................................................................................................................................................................................................... 19 0 20 0.10 2 1 0 1 0 0 0
.........................................................................................CGGTAGGGGCTACTGGAGCCGG............................................................................................................................................ 22 0 20 0.10 2 0 1 0 0 1 0
...............................................................................................................................................................GCTGCAGGAACCGGGTAGGGGT...................................................................... 22 1 20 0.10 2 2 0 0 0 0 0
.....................................................................GGCTACAGGCTGCAGGAACC.................................................................................................................................................................. 20 0 20 0.10 2 0 1 0 1 0 0
...........................................GAACCGGGTAGGGGCTACTGGAGCC....................................................................................................................................................................................... 25 0 20 0.10 2 2 0 0 0 0 0
......................................................................................................................GCTACAGGAACCGGGTAGGGGC............................................................................................................... 22 0 10 0.10 1 1 0 0 0 0 0
.......................................................................................................................CTACGGGAACCGGGTAGGGGC............................................................................................................... 21 1 11 0.09 1 1 0 0 0 0 0
......................................................................................................................................................AGGCTACAGGCTGCAGGAACCG............................................................................... 22 0 11 0.09 1 0 1 0 0 0 0
.................................................................................................................TACAGGCTACAGGAACCGGG...................................................................................................................... 20 0 11 0.09 1 0 1 0 0 0 0
..................................................................................................................ACAGGCTACAGGAACCGGG...................................................................................................................... 19 0 11 0.09 1 0 1 0 0 0 0
.............................................................................................................GTGCTACAGGCTACAGGAACC......................................................................................................................... 21 1 12 0.08 1 0 0 0 1 0 0
.....................................................................GGCTACAGCCTGCAGGAACCCGGTAGGG.......................................................................................................................................................... 28 1 13 0.08 1 1 0 0 0 0 0
...............................................................................................................GCTACAGGTTACAGGAACCGG....................................................................................................................... 21 1 13 0.08 1 0 1 0 0 0 0
........................................................................TACAGGCTGCAGGAACCCGGTAGGGGC........................................................................................................................................................ 27 0 14 0.07 1 1 0 0 0 0 0
...............................................................................................................GCTACAGGGTACAGGAACCGGTT..................................................................................................................... 23 2 14 0.07 1 0 1 0 0 0 0
.......................................................................CTACAGGCTGCAGGAACCCGGTAGGGG......................................................................................................................................................... 27 0 14 0.07 1 1 0 0 0 0 0
.........................................................................ACAGGCTGCAGGAACCCGGTAGGGGC........................................................................................................................................................ 26 0 14 0.07 1 1 0 0 0 0 0
......................................................................................................................GCTACAGGAACCGGGTGGGGG................................................................................................................ 21 1 14 0.07 1 0 0 1 0 0 0
........................................................................TACAGGCTGCAGGAACCCGGTT............................................................................................................................................................. 22 1 15 0.07 1 1 0 0 0 0 0
........................................................................TACAGGCTGCAGGAACCCGGT.............................................................................................................................................................. 21 0 15 0.07 1 0 1 0 0 0 0
.........................................................................ACAGGCTGCAGGAACCCGGTA............................................................................................................................................................. 21 0 15 0.07 1 0 0 1 0 0 0
.........................................................................ACAGGCTGCAGGAACCCGGTAGGGG......................................................................................................................................................... 25 0 15 0.07 1 1 0 0 0 0 0
......................................................................................................................GCTACAGGAACCGGGTGG................................................................................................................... 18 1 15 0.07 1 1 0 0 0 0 0
.........................................................................ACAGGCTGCAGGAACCCGG............................................................................................................................................................... 19 0 15 0.07 1 0 1 0 0 0 0
........................................................................TACAGGATGCAGGAACCCGGTT............................................................................................................................................................. 22 2 17 0.06 1 1 0 0 0 0 0
..............................CTACAGGCTGCAGGAACCGGGTAGGGGC................................................................................................................................................................................................. 28 0 17 0.06 1 1 0 0 0 0 0
.....................................................................GGCTACAGGCTGCCGGAACCC................................................................................................................................................................. 21 1 17 0.06 1 0 0 0 0 0 1
.........................................................................................................................................................CTACAGGCTGCAGGAACCGGGTAGGGGC...................................................................... 28 0 17 0.06 1 1 0 0 0 0 0
.....................................................................GGCTACAGGCTGCAGGAACCCG................................................................................................................................................................ 22 0 17 0.06 1 1 0 0 0 0 0
..AAACTGGGCAGGAGCTACTGGAGCC................................................................................................................................................................................................................................ 25 0 18 0.06 1 1 0 0 0 0 0
.GAAACTGGACAGGAGCTACTTGAGAC................................................................................................................................................................................................................................ 26 3 18 0.06 1 1 0 0 0 0 0
....ACTGGGCAGGAGCTACTGG.................................................................................................................................................................................................................................... 19 0 18 0.06 1 0 0 1 0 0 0
..............................................................................................................................................................GGCTGCAGGAACCGGGTAGGGGCT..................................................................... 24 0 18 0.06 1 1 0 0 0 0 0
..AAACTGGGCAGGAGCTACT...................................................................................................................................................................................................................................... 19 0 18 0.06 1 1 0 0 0 0 0
.GAAACTGGGCAGGAGCGACTGG.................................................................................................................................................................................................................................... 22 1 18 0.06 1 0 0 0 0 1 0
..AAACTGGGCGGGAGCTACTGGAGCC................................................................................................................................................................................................................................ 25 1 18 0.06 1 1 0 0 0 0 0
................................................................................................................................................................CTGCAGGAACCGGGTAGGGGCT..................................................................... 22 0 18 0.06 1 0 1 0 0 0 0
.....................................CTGCAGGAACCGGGTAGGGGCT................................................................................................................................................................................................ 22 0 18 0.06 1 0 1 0 0 0 0
...................................GGCTGCAGGAACCGGGTAGGGGCT................................................................................................................................................................................................ 24 0 18 0.06 1 1 0 0 0 0 0
....ACTGGGCAGGAGCTACTGGAG.................................................................................................................................................................................................................................. 21 0 18 0.06 1 0 1 0 0 0 0
.......................................GCAGGAACCGGGTAGGGGAT................................................................................................................................................................................................ 20 1 18 0.06 1 1 0 0 0 0 0
..................................................................................................................................................................GCAGGAACCGGGTAGGGGAT..................................................................... 20 1 18 0.06 1 1 0 0 0 0 0
...............................................................................................................................................................GCTGCAGGAACCGTGTAGGGGC...................................................................... 22 1 19 0.05 1 1 0 0 0 0 0
............................................................................................................................................................CAGGCTGCAGGAACCGGGTAG.......................................................................... 21 0 19 0.05 1 0 1 0 0 0 0
.......................................GCAGGAACCGGGTAGGGG.................................................................................................................................................................................................. 18 0 19 0.05 1 1 0 0 0 0 0
...............................................................................................................................................................GCTGCAGGAACCGGGAAGGGGC...................................................................... 22 1 19 0.05 1 1 0 0 0 0 0
.........GCGGGAGCTACTGGAGCCGGGCT........................................................................................................................................................................................................................... 23 1 19 0.05 1 1 0 0 0 0 0
..........CAGGACCTACTGGAGCCGGGC............................................................................................................................................................................................................................ 21 1 19 0.05 1 0 1 0 0 0 0
........GGCAGGAGCTACTGGAGCC................................................................................................................................................................................................................................ 19 0 19 0.05 1 0 1 0 0 0 0
.........GCAGGAGCTACTGGAGCCGG.............................................................................................................................................................................................................................. 20 0 19 0.05 1 0 0 1 0 0 0
...............................................................................................................................................................GCTGCAGGAACCGGGTAGGG........................................................................ 20 0 19 0.05 1 0 0 0 0 0 1
............................................................................................................................................................CAGGCTGCAGGAACCGGGTAGGGG....................................................................... 24 0 19 0.05 1 1 0 0 0 0 0
.................................CAGGCTGCAGGAACCGGGTAGGGG.................................................................................................................................................................................................. 24 0 19 0.05 1 1 0 0 0 0 0
....................................GCTGCAGGAACCGGGTAGGT................................................................................................................................................................................................... 20 1 19 0.05 1 0 0 1 0 0 0
......TGGGCAGGAGCTACTGGAGC................................................................................................................................................................................................................................. 20 0 19 0.05 1 0 1 0 0 0 0
...........AGGAGCTACTGTAGCCGGGC............................................................................................................................................................................................................................ 20 1 19 0.05 1 1 0 0 0 0 0
....................................GCTGCAGGAACCGGGAAGGGGC................................................................................................................................................................................................. 22 1 19 0.05 1 1 0 0 0 0 0
..........CAGGAGCTACTGGAGCCG............................................................................................................................................................................................................................... 18 0 19 0.05 1 0 1 0 0 0 0
.....................................CGGCAGGAACCGGGTAGGGGC................................................................................................................................................................................................. 21 1 19 0.05 1 0 0 0 1 0 0
...............................................................................................................................................................GCTGCAGGAACCGGGTAGG......................................................................... 19 0 19 0.05 1 1 0 0 0 0 0
...................................GGCTGCAGGAACCGGGTAGGG................................................................................................................................................................................................... 21 0 19 0.05 1 1 0 0 0 0 0
...........AGGAGCTACTGGAGCCGGGCTT.......................................................................................................................................................................................................................... 22 1 19 0.05 1 1 0 0 0 0 0
.......GGGCAGGAGCTACTGGAGC................................................................................................................................................................................................................................. 19 0 19 0.05 1 0 1 0 0 0 0
............GGATCTACTGGAGCCGGGC............................................................................................................................................................................................................................ 19 1 19 0.05 1 1 0 0 0 0 0
.................................CAGGCTGCAGGAACCGGGTAG..................................................................................................................................................................................................... 21 0 19 0.05 1 0 1 0 0 0 0
......TGGGCGGGAGCTACTGGAGCCGGGC............................................................................................................................................................................................................................ 25 1 19 0.05 1 1 0 0 0 0 0
............................................................................................................................................................CAGGCTGCAGGAACCGGGTAGGG........................................................................ 23 0 19 0.05 1 1 0 0 0 0 0
................................................................................................................................................................CGGCAGGAACCGGGTAGGGGC...................................................................... 21 1 19 0.05 1 0 0 0 1 0 0
.................................CAGGCTGCAGGAACCGGGTAGGG................................................................................................................................................................................................... 23 0 19 0.05 1 1 0 0 0 0 0
......................................TGCAGGAAGCGGGTAGGGGCT................................................................................................................................................................................................ 21 1 19 0.05 1 0 1 0 0 0 0
....................................GCTGCAGGAACCGGGTAGG.................................................................................................................................................................................................... 19 0 19 0.05 1 1 0 0 0 0 0
..............................................................................................................................................................GGCTGCAGGAACCGGGTAGGG........................................................................ 21 0 19 0.05 1 1 0 0 0 0 0
........GGCAGGAGCTACTGGAGCCGG.............................................................................................................................................................................................................................. 21 0 19 0.05 1 0 1 0 0 0 0
...............................................................................................................................................................GCTGCAGGAACCGGGTAGGT........................................................................ 20 1 19 0.05 1 0 0 1 0 0 0
......TGGGCAGGAGCTACTGGAGCCGGGC............................................................................................................................................................................................................................ 25 0 19 0.05 1 1 0 0 0 0 0
....................................GCTGCAGGAACCGTGTAGGGGC................................................................................................................................................................................................. 22 1 19 0.05 1 1 0 0 0 0 0
..................................................................................................................................................................GCAGGAACCGGGTAGGGG....................................................................... 18 0 19 0.05 1 1 0 0 0 0 0
..............................................................................................................................................................GGCTGCAGGAACCGGGTAGGGG....................................................................... 22 0 19 0.05 1 1 0 0 0 0 0
.....CTGGGCAGGAGCTACTGG.................................................................................................................................................................................................................................... 18 0 19 0.05 1 1 0 0 0 0 0
.................................................................................................................................................................TGCAGGAAGCGGGTAGGGGCT..................................................................... 21 1 19 0.05 1 0 1 0 0 0 0
...................................GGCTGCAGGAACCGGGTAGGGG.................................................................................................................................................................................................. 22 0 19 0.05 1 1 0 0 0 0 0
....................................GCTGCAGGAACCGGGTAGGG................................................................................................................................................................................................... 20 0 19 0.05 1 0 0 0 0 0 1
..........CAGGAGCTACTGGGGCCGGGC............................................................................................................................................................................................................................ 21 1 19 0.05 1 1 0 0 0 0 0
..............................................................................CTGCAGGAGCCCGGTAGGGGCTA...................................................................................................................................................... 23 1 20 0.05 1 0 1 0 0 0 0
........................................................................................................................................................GCTACACGCTGCAGGAACCGGG............................................................................. 22 1 20 0.05 1 0 1 0 0 0 0
..............................................................................................GGGGCTACTGGAGCCGGGCTACAGG.................................................................................................................................... 25 0 20 0.05 1 0 1 0 0 0 0
.............................................................................................................................................................................................................................CTACTGGAGCCGGCCTACAGG......... 21 1 20 0.05 1 0 0 1 0 0 0
...............GCTACTGGAGCCGGGCTACAGG...................................................................................................................................................................................................................... 22 0 20 0.05 1 1 0 0 0 0 0
..........................................................................................................................................................TACAGGCTGCAGGAACCGGG............................................................................. 20 0 20 0.05 1 0 1 0 0 0 0
.....................................CTGCAGGAACCGGGTAGGGGCTT............................................................................................................................................................................................... 23 1 20 0.05 1 0 1 0 0 0 0
..................................................................................................................................................................GCAGGAACCTGGTAGGGGC...................................................................... 19 1 20 0.05 1 1 0 0 0 0 0
.....................................................................................AACCCGGTAGGGGCTACTGGAGC............................................................................................................................................... 23 0 20 0.05 1 1 0 0 0 0 0
..............................................................................CTGCAGGAACCCGGTAGGG.......................................................................................................................................................... 19 0 20 0.05 1 0 1 0 0 0 0
........................................................................................................................................................GCTACAGGCTGCAGGAACCGGG............................................................................. 22 0 20 0.05 1 1 0 0 0 0 0
..........................................................................................................................................................TACAGGCTGCAGGAACCG............................................................................... 18 0 20 0.05 1 0 1 0 0 0 0
...............................................................................TGCAGGAACCCGGTAGGGGCTT...................................................................................................................................................... 22 1 20 0.05 1 0 0 0 0 0 1
.............................................................................................AGGGGCTACTGGAGCCGGGCTACA...................................................................................................................................... 24 0 20 0.05 1 0 1 0 0 0 0
.................TACTGGAGCCGGTCTACAGGC..................................................................................................................................................................................................................... 21 1 20 0.05 1 1 0 0 0 0 0
..............................................................................CTGCAGGAACCCGGTAGGGGCT....................................................................................................................................................... 22 0 20 0.05 1 1 0 0 0 0 0
..........................................................................................GGTAGGGGCTACTGGAGCCGGGC.......................................................................................................................................... 23 0 20 0.05 1 1 0 0 0 0 0
.................................CAGGCTGCAGGAACCGGGTA...................................................................................................................................................................................................... 20 0 20 0.05 1 0 1 0 0 0 0
...............GCTACTGGAGCCGGGATACAG....................................................................................................................................................................................................................... 21 1 20 0.05 1 1 0 0 0 0 0
................CTACTGGAGCCGGGCTACA........................................................................................................................................................................................................................ 19 0 20 0.05 1 1 0 0 0 0 0
..................................................................................................CTACTGGAGCCGGTCTACAGG.................................................................................................................................... 21 1 20 0.05 1 0 0 0 0 1 0
..............................CTGCAGGCTGCAGGAACCGGG........................................................................................................................................................................................................ 21 1 20 0.05 1 1 0 0 0 0 0
............................................................................................................................................................CAGGCTGCAGGAACCGGGTA........................................................................... 20 0 20 0.05 1 0 1 0 0 0 0
.............................GCTACAGGCTGCAGGAACAGG......................................................................................................................................................................................................... 21 1 20 0.05 1 1 0 0 0 0 0
.........................................................................................................................................................CTACAGGCTGCAGGAACCGGGT............................................................................ 22 0 20 0.05 1 0 1 0 0 0 0
........................................................................................................................................................................................................................AGGGGCTACTGGAGCCGGGCTT............. 22 1 20 0.05 1 1 0 0 0 0 0
..........................................................................................................................................................................................................................GGGCTACTGGAGCCGGCCT.............. 19 1 20 0.05 1 0 1 0 0 0 0
...............GCTACTGGAGCCGGGCTACAAGC..................................................................................................................................................................................................................... 23 1 20 0.05 1 1 0 0 0 0 0
................CTACTGGAGCCGGGCTACAGGC..................................................................................................................................................................................................................... 22 0 20 0.05 1 0 0 0 1 0 0
.........................................................................................................................................................................................................................GGGGCTACTGGAGCCGGGC............... 19 0 20 0.05 1 1 0 0 0 0 0
..........................................................................CAGGCTGCAGGAACCCGGTAGG........................................................................................................................................................... 22 0 20 0.05 1 1 0 0 0 0 0
.............................................................................................................................................................................................................................CTACTGGAGCCGGGCTACA........... 19 0 20 0.05 1 1 0 0 0 0 0
................CTACTGGAGCCGGCCTACAG....................................................................................................................................................................................................................... 20 1 20 0.05 1 0 1 0 0 0 0
................CTACTGGAGCCGGCCTACAGG...................................................................................................................................................................................................................... 21 1 20 0.05 1 0 0 1 0 0 0
.................................................................................................................................CGGGTAGGGGCTACTGGAGAC..................................................................................................... 21 1 20 0.05 1 0 0 0 1 0 0
.................................................................................................................................CGGGTAGGGGCTACTGGAGCC..................................................................................................... 21 0 20 0.05 1 0 1 0 0 0 0
.............................................................................GCTGCAGGAACCCGGTAGGG.......................................................................................................................................................... 20 0 20 0.05 1 1 0 0 0 0 0
.....................................................................................................................................................................................................................GGTAGGGGCTACTGGAGCCGGGC............... 23 0 20 0.05 1 1 0 0 0 0 0
...............................................CGGGTAGGGGCTACTGGAGAC....................................................................................................................................................................................... 21 1 20 0.05 1 0 0 0 1 0 0
................................................................................................................................CCGGGTAGGGGCTACTGGAGC...................................................................................................... 21 0 20 0.05 1 0 1 0 0 0 0
........................................................................................................................................................................................................................ATGGGCTTCTGGAGCCGGGCC.............. 21 3 20 0.05 1 0 0 0 1 0 0
......TGGGCAGGAGCTACTGTT................................................................................................................................................................................................................................... 18 2 20 0.05 1 0 1 0 0 0 0
.............................................................................GCTGCAGGAACCCTGTAGG........................................................................................................................................................... 19 1 20 0.05 1 0 1 0 0 0 0
..............................CTACAGGCTGCAGGAACCGGGT....................................................................................................................................................................................................... 22 0 20 0.05 1 0 1 0 0 0 0
.................................................................................CAGGAACCCGGTAGGGGCTAC..................................................................................................................................................... 21 0 20 0.05 1 1 0 0 0 0 0
..................................................................................................CTACTGGAGCCGGGCTACA...................................................................................................................................... 19 0 20 0.05 1 1 0 0 0 0 0
.............................................................................................................................................................................................................................CTACTGGAGCCGGCCTACAG.......... 20 1 20 0.05 1 0 1 0 0 0 0
..............................................CCGGGTAGGGGCTACTGGAGC........................................................................................................................................................................................ 21 0 20 0.05 1 0 1 0 0 0 0
....................................................................................................................................................................................................................GGGTAGGGGCTGCTGGAGCCGGGC............... 24 1 20 0.05 1 1 0 0 0 0 0
...............................................................................TGCAGGAGCCCGGTAGGGGCT....................................................................................................................................................... 21 1 20 0.05 1 0 1 0 0 0 0
..............................................................................CTGCAGGAACCCGGTAGGTT......................................................................................................................................................... 20 2 20 0.05 1 0 0 1 0 0 0
..................................................................................................................................................................GCAGTAACCGGGTATGGGC...................................................................... 19 2 20 0.05 1 1 0 0 0 0 0
................................................................................................................................................................CTGCAGGAACCGGGTAGGGGCTT.................................................................... 23 1 20 0.05 1 0 1 0 0 0 0
.................................................................................................GCTACTGGAGCCGGGCTACAAGC................................................................................................................................... 23 1 20 0.05 1 1 0 0 0 0 0
...............................................................................................................CCTACAGGCTACAGGAACCGG....................................................................................................................... 21 1 20 0.05 1 1 0 0 0 0 0
............................................................................................................................................................CAGGCTGAAGGAACCGGGT............................................................................ 19 1 20 0.05 1 1 0 0 0 0 0
..............................................................................................................................................................GGCTGCAGGAACCGGGTATGGGC...................................................................... 23 1 20 0.05 1 1 0 0 0 0 0
.................................CAGGCTGAAGGAACCGGGT....................................................................................................................................................................................................... 19 1 20 0.05 1 1 0 0 0 0 0
..............................................................................................................................................................................................................................TACTGGAGCCGGTCTACAGGC........ 21 1 20 0.05 1 1 0 0 0 0 0
....................................GCTGCAGGAACCGGGCAGGGGTT................................................................................................................................................................................................ 23 2 20 0.05 1 0 0 0 0 1 0
........................................................................................CCGGTAGGGGCTTCTGGAGC............................................................................................................................................... 20 1 20 0.05 1 0 0 0 1 0 0
.......................................................................................CCCGGTAGGGTCTACTGGAGCCGGGC.......................................................................................................................................... 26 1 20 0.05 1 1 0 0 0 0 0
.................................................................................................GCTACTGGAGCCGGGCTAC....................................................................................................................................... 19 0 20 0.05 1 0 1 0 0 0 0
.........................................................................................................................................................CTACAGGCTGCAGGAACCGG.............................................................................. 20 0 20 0.05 1 0 0 1 0 0 0
..................................................................................................CTACTGGAGCCGGCCTACAGG.................................................................................................................................... 21 1 20 0.05 1 0 0 1 0 0 0
....................................................................................GAACCCGGTAGGGGCTGCTGGGGCCGGGC.......................................................................................................................................... 29 2 20 0.05 1 0 0 1 0 0 0
.............................................................................................ATGGGCTTCTGGAGCCGGGCC......................................................................................................................................... 21 3 20 0.05 1 0 0 0 1 0 0
...............................TACAGGCTGCAGGAACCGGG........................................................................................................................................................................................................ 20 0 20 0.05 1 0 1 0 0 0 0
........................................................................................ACGGCAGGGGCTACTGGA................................................................................................................................................. 18 2 20 0.05 1 0 0 0 0 1 0
..................................................................................................CTACTGGAGCCGGGCTACAGGC................................................................................................................................... 22 0 20 0.05 1 0 0 0 1 0 0
.................................................................................................................................................................TGCAGGAACCGGGTAGGGTTT..................................................................... 21 2 20 0.05 1 0 0 1 0 0 0
........GGCAGGAGCTACCGGAGC................................................................................................................................................................................................................................. 18 1 20 0.05 1 0 1 0 0 0 0
........................................................................TACAGGCTACAGGAACCCGG............................................................................................................................................................... 20 1 20 0.05 1 0 0 0 0 1 0
.......................................................................................................................................................GGCTACAGGCTGCAGGAACC................................................................................ 20 0 20 0.05 1 0 1 0 0 0 0
.............................................ACCGGGTATGGGCTACTGGAGCC....................................................................................................................................................................................... 23 1 20 0.05 1 0 1 0 0 0 0
...............................................CGGGTAGGGGCTACTGGAGCC....................................................................................................................................................................................... 21 0 20 0.05 1 0 1 0 0 0 0
........................................................................................CAGGTAGGGGCTACTGGAGCCGGGC.......................................................................................................................................... 25 1 20 0.05 1 1 0 0 0 0 0
............................................................................................................................................................................................................................GCTACTGGAGCCGGGCTACAGG......... 22 0 20 0.05 1 1 0 0 0 0 0
........................................................................................................................................................................................................................AGGGGCTACTGGAGCCGGGCTACAGGCTG...... 29 0 20 0.05 1 1 0 0 0 0 0
....................................GCTGCAGGAACCGGGTAGGTT.................................................................................................................................................................................................. 21 2 20 0.05 1 0 1 0 0 0 0
...........................................................................................................................AGGAACCGGGTAGGGGCTACT........................................................................................................... 21 0 20 0.05 1 0 1 0 0 0 0
...................CTGGAGCCGGGCTACAGGC..................................................................................................................................................................................................................... 19 0 20 0.05 1 1 0 0 0 0 0
.............................................................................................AGGGGCTACTGGAGCCGGGCTT........................................................................................................................................ 22 1 20 0.05 1 1 0 0 0 0 0
.......................................................................................................................................................................................................................TAGGGGCTACTGGAGCCGGGCT.............. 22 0 20 0.05 1 1 0 0 0 0 0
.................................................................................CAGGAACCCGGTAGGGGC........................................................................................................................................................ 18 0 20 0.05 1 0 1 0 0 0 0
.............................................................................GCTGCATGAACCCGGTAGGGG......................................................................................................................................................... 21 1 20 0.05 1 1 0 0 0 0 0
.........................................................................................CGGTAGGGGCTACTGGAGC............................................................................................................................................... 19 0 20 0.05 1 0 0 1 0 0 0
......................................................................................................................................................................................................................GTAGGGGCTACTGGAGCCGGT................ 21 1 20 0.05 1 0 1 0 0 0 0
............................................................................................................................................................................................................................GCTACTGGAGCCGGGATACAG.......... 21 1 20 0.05 1 1 0 0 0 0 0
....................................GCTGCAGGAACCGGGTAGGGGTT................................................................................................................................................................................................ 23 1 20 0.05 1 1 0 0 0 0 0
............................................................................................TAGGGGCTACTGGAGCCGGGCT......................................................................................................................................... 22 0 20 0.05 1 1 0 0 0 0 0
...................................GGCTGCAGGAACCGGGTATGGGC................................................................................................................................................................................................. 23 1 20 0.05 1 1 0 0 0 0 0
..................................................................................AGGAACCCGGTAGGGGCTACT.................................................................................................................................................... 21 0 20 0.05 1 0 1 0 0 0 0
.............................GCTACACGCTGCAGGAACCGGG........................................................................................................................................................................................................ 22 1 20 0.05 1 0 1 0 0 0 0
..............................................................................................................................................................GGCTGCAGGAACCGGGTATGGG....................................................................... 22 1 20 0.05 1 0 0 1 0 0 0
....................................................................................................................................................................................................................GGGTAGGGGCTACTGGAGCCTGGC............... 24 1 20 0.05 1 1 0 0 0 0 0

Anti-sense strand reads

TCTTTGACCCGTCCTCGATGACCTCGGCCCGATGTCCGACGTCCTTGGCCCATCCCCGATGACCTCGGTCCGATGTCCGACGTCCTTGGGCCATCCCCGATGACCTCGGCCCGATGTCCGATGTCCTTGGCCCATCCCCGATGACCTCGGTCCGATGTCCGACGTCCTTGGCCCATCCCCGATAACCTCGGCCCGATGTCCGACGTCCTTGACCCATCCCCGATGACCTCGGCCCGATGTCCGACGTCCTT
**********************************************************************((((.....((((..........(((.((((........)))).)))...))))))))....*********************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M044
female body
 M058
embryo
 V106
head
 V055
head
 V105
male body
.......CCCGTCCTCGATGACCTCGGC............................................................................................................................................................................................................................... 21 0 19 0.58 11 11 0 0 0 0
......................................................................................................................................................TCCGATGTCCGACGTCCTTGG................................................................................ 21 0 12 0.42 5 3 2 0 0 0
....................................................................TCCGATGTCCGACGTCCTTGG.................................................................................................................................................................. 21 0 12 0.42 5 3 2 0 0 0
..........................................................................................................CGGCCCGATGTCCGATGTCCT............................................................................................................................ 21 0 12 0.42 5 3 2 0 0 0
.................................................................CGGTCCGATGTCCGACGTCCT..................................................................................................................................................................... 21 0 8 0.38 3 2 1 0 0 0
...................................................................................................................................................CGGTCCGATGTCCGACGTCCT................................................................................... 21 0 8 0.38 3 2 1 0 0 0
....................................................................................................................TCCGATGTCCTTGGCCCATCC.................................................................................................................. 21 0 9 0.33 3 2 0 1 0 0
.....................................................................................................................................................................................................GTCCGACGTCCTTGACCCATC................................. 21 0 6 0.33 2 2 0 0 0 0
...............................................................................................................................................................................................CCCGATGTCCGACGTCCTTGA....................................... 21 0 3 0.33 1 0 0 1 0 0
...................................................................................................................GTCCGATGTCCTTGGCCCATC................................................................................................................... 21 0 9 0.33 3 2 0 1 0 0
................................................................................................................................................................................................CCGATGTCCGACGTCCTTGAC...................................... 21 0 3 0.33 1 1 0 0 0 0
..................................TCCGACGTCCTTGGCCCATCC.................................................................................................................................................................................................... 21 0 19 0.32 6 3 0 3 0 0
.............................................................................................................................................................TCCGACGTCCTTGGCCCATCC......................................................................... 21 0 19 0.32 6 3 0 3 0 0
..............................................................CCTCGGTCCGATGTCCGACGT........................................................................................................................................................................ 21 0 4 0.25 1 0 1 0 0 0
............................................................GACCTCGGTCCGATGTCCGAC.......................................................................................................................................................................... 21 0 4 0.25 1 1 0 0 0 0
.................................................................CGGTCCGATGTCGGACGTCCT..................................................................................................................................................................... 21 1 8 0.25 2 2 0 0 0 0
..............TCGATGACCTCGGCCCGATGT........................................................................................................................................................................................................................ 21 0 8 0.25 2 1 0 0 1 0
................................................................................................................................................CCTCGGTCCGATGTCCGACGT...................................................................................... 21 0 4 0.25 1 0 1 0 0 0
..............................................................................................................................................GACCTCGGTCCGATGTCCGAC........................................................................................ 21 0 4 0.25 1 1 0 0 0 0
................................................................................................................................................CCTCGGTCCGATGTCCGACGTCC.................................................................................... 23 0 4 0.25 1 0 0 1 0 0
..............................................................CCTCGGTCCGATGTCCGACGTCC...................................................................................................................................................................... 23 0 4 0.25 1 0 0 1 0 0
...................................................................................................................................................CGGTCCGATGTCGGACGTCCT................................................................................... 21 1 8 0.25 2 2 0 0 0 0
..............................................................................................................................................GACCTCGGTCCGATGTCCGA......................................................................................... 20 0 4 0.25 1 1 0 0 0 0
............................................................GACCTCGGTCCGATGTCCGA........................................................................................................................................................................... 20 0 4 0.25 1 1 0 0 0 0
.....................................................................CCGATGTCCGACGTCCTTGGG................................................................................................................................................................. 21 0 17 0.24 4 2 2 0 0 0
.................................................................................................................ATGTCCGATGTCCTTGGCCCAT.................................................................................................................... 22 0 9 0.22 2 0 0 2 0 0
.....................................................................................................................CCGATGTCCTTGGCCCATCC.................................................................................................................. 20 0 10 0.20 2 0 2 0 0 0
.......................................................................................................CCTCGGCCCGATGTCCGATGT............................................................................................................................... 21 0 11 0.18 2 2 0 0 0 0
.......................................................................................................CCTCGGCCCGATGTCCGATGTC.............................................................................................................................. 22 0 11 0.18 2 1 0 0 1 0
.....................................................................................................................................................GTCCGATGTCCGACGTCCTTG................................................................................. 21 0 12 0.17 2 2 0 0 0 0
.................................................................................................................................................................................................CGATGTCCGACGTCCTTGA....................................... 19 0 6 0.17 1 1 0 0 0 0
...................................................................GTCCGATGTCCGACGTCCTT.................................................................................................................................................................... 20 0 12 0.17 2 2 0 0 0 0
...................................................................GTCCGATGTCCGACGTCCTTG................................................................................................................................................................... 21 0 12 0.17 2 2 0 0 0 0
....................................................................................................................................................GGTCCGATGTCCGACGTCCTT.................................................................................. 21 0 12 0.17 2 2 0 0 0 0
...TTGACCCGTCCTCGATGACCT................................................................................................................................................................................................................................... 21 0 18 0.17 3 2 0 0 0 1
..................................................................GGTCCGATGTCCGACGTCCTT.................................................................................................................................................................... 21 0 12 0.17 2 2 0 0 0 0
.............TTCGATGACCTCGGGCCGATGTCC...................................................................................................................................................................................................................... 24 2 6 0.17 1 0 0 0 1 0
.......................................................................................................................................................................................................CCGACGTCCTTGACCCATC................................. 19 0 6 0.17 1 1 0 0 0 0
.................................................................................................................................................................................................CGATGTCCGACGTCCTTGAC...................................... 20 0 6 0.17 1 1 0 0 0 0
.....................................................................................................................................................GTCCGATGTCCGACGTCCTT.................................................................................. 20 0 12 0.17 2 2 0 0 0 0
..............................................................................................................................................................CCGACGTCCTTGGCCCATCC......................................................................... 20 0 19 0.16 3 0 2 1 0 0
.................................GTCCGACGTCCTTGGCCCATC..................................................................................................................................................................................................... 21 0 19 0.16 3 3 0 0 0 0
............................................................................................................................................................GTCCGACGTCCTTGGCCCATC.......................................................................... 21 0 19 0.16 3 3 0 0 0 0
...................................CCGACGTCCTTGGCCCATCC.................................................................................................................................................................................................... 20 0 19 0.16 3 0 2 1 0 0
....................................................................................................................................................GGTCCGATGTCCGACGTCC.................................................................................... 19 0 13 0.15 2 2 0 0 0 0
..................................................................GGTCCGATGTCCGACGTCC...................................................................................................................................................................... 19 0 13 0.15 2 2 0 0 0 0
...................................................................................................................................................CGGTCCGATGTCCGACGTCC.................................................................................... 20 0 8 0.13 1 0 1 0 0 0
.................................................................CGGTCCGATGTCCGACGTCC...................................................................................................................................................................... 20 0 8 0.13 1 0 1 0 0 0
.................................................................................................................................................................................CCCGATAACCTCGGCCCCA....................................................... 19 1 8 0.13 1 0 1 0 0 0
.................................................................CGGTCCGATGTCCGACGTCCGT.................................................................................................................................................................... 22 1 9 0.11 1 0 1 0 0 0
..............................................................................................................CCGATGTCCGATGTCCTTGGCCCATCCC................................................................................................................. 28 0 9 0.11 1 1 0 0 0 0
...................................................................................................................................................CGGTCCGATGTCCGACGTCCGT.................................................................................. 22 1 9 0.11 1 0 1 0 0 0
..............................................................................................................CCGATGTCCGATGTCCTTGGCCCATCC.................................................................................................................. 27 0 9 0.11 1 0 1 0 0 0
......................................................................CGATGTCCGACGTCCTTGGG................................................................................................................................................................. 20 0 18 0.11 2 2 0 0 0 0
...................................................................................................................GTCCGATGTCCTTGGCCCAT.................................................................................................................... 20 0 9 0.11 1 1 0 0 0 0
....................................................................................................................TCCGATGTCCTTGGCCCGTCC.................................................................................................................. 21 1 9 0.11 1 1 0 0 0 0
..................................................................................................................TGTCCGATGTCCTTGGCCCATC................................................................................................................... 22 0 9 0.11 1 1 0 0 0 0
...................................................................................................................GTCCGATGTCCTTGGCCCGTC................................................................................................................... 21 1 9 0.11 1 1 0 0 0 0
..................................TCCGACGTCCTTGGCCCATC..................................................................................................................................................................................................... 20 0 19 0.11 2 1 0 1 0 0
.........CGTCCTCGATGACCTCGGC............................................................................................................................................................................................................................... 19 0 19 0.11 2 2 0 0 0 0
.............................................................................................................................................................TCCGACGTCCTTGGCCCATC.......................................................................... 20 0 19 0.11 2 1 0 1 0 0
.............................CGATGTCCGACGTCCTTGGC.......................................................................................................................................................................................................... 20 0 20 0.10 2 2 0 0 0 0
..............ACGATGACCTCGGCCCGATG......................................................................................................................................................................................................................... 20 1 20 0.10 2 0 0 2 0 0
........................................................................................................................................................CGATGTCCGACGTCCTTGGC............................................................................... 20 0 20 0.10 2 2 0 0 0 0
..................................................................................................................................................................................................................................CCTCGGCCCGATGTCCGACGT.... 21 0 20 0.10 2 0 2 0 0 0
..............................................................................................................CCGATGTCCGATGTCCTTGTC........................................................................................................................ 21 1 10 0.10 1 0 1 0 0 0
..............................................................................................................CCGATGTCCGATGTCCTTGGCCCA..................................................................................................................... 24 0 10 0.10 1 0 0 1 0 0
........................................................................................................................ATGTCCTTGGCGCGTCCCCG............................................................................................................... 20 2 10 0.10 1 1 0 0 0 0
................................................................................................................................................................................................CCGATGTCCGAAGTCCTTGA....................................... 20 1 10 0.10 1 1 0 0 0 0
.........................................................................................................................................................................................CCTCGGCCCGATGTCCGACGT............................................. 21 0 20 0.10 2 0 2 0 0 0
.............................................................................................................CCCGATGTCCGATGTCCTTGGC........................................................................................................................ 22 0 10 0.10 1 1 0 0 0 0
.....................CCTCGGCCCGATGTCCGACGT................................................................................................................................................................................................................. 21 0 20 0.10 2 0 2 0 0 0
...............................................................................................................................................................................................CCCGATGTCCGACGTCCTTG........................................ 20 0 20 0.10 2 2 0 0 0 0
.....................................................................................................................CCGATGTCCTTGGCCCATC................................................................................................................... 19 0 10 0.10 1 1 0 0 0 0
..............................................................................................................CCGATGTCCGATGTCCTTG.......................................................................................................................... 19 0 12 0.08 1 0 0 1 0 0
.............................................................................................................CCCGATGTCCGATGTCCTT........................................................................................................................... 19 0 12 0.08 1 0 1 0 0 0
....................................................................................................................................................GGTCCGATGTCCGGCGTCCTTG................................................................................. 22 1 12 0.08 1 1 0 0 0 0
...........................................................................................................GGCCCGATGTCCGATGTCC............................................................................................................................. 19 0 12 0.08 1 1 0 0 0 0
.........................................................................................................TCGGCCCGATGTCCGATGTCC............................................................................................................................. 21 0 12 0.08 1 1 0 0 0 0
....................................................................................................................................................GGTCCGATGTCCGGCGTCCTT.................................................................................. 21 1 12 0.08 1 1 0 0 0 0
..........................................................................................................CGGCCCGATGTCCGATGTCCTT........................................................................................................................... 22 0 12 0.08 1 1 0 0 0 0
.............................................................................................................CCCGATGTCCGATGTCCTTG.......................................................................................................................... 20 0 12 0.08 1 0 0 1 0 0
..................................................................GGTCCGATGTCCGGCGTCCTTG................................................................................................................................................................... 22 1 12 0.08 1 1 0 0 0 0
.............................................................................................................CCCGATTTCCGATGTCCTTGG......................................................................................................................... 21 1 12 0.08 1 1 0 0 0 0
....................................................................TCCGATGTCCGACGTCCTTG................................................................................................................................................................... 20 0 12 0.08 1 0 0 1 0 0
................................................................................................................GGTGTCCGATGTCCTTGGCCC...................................................................................................................... 21 1 12 0.08 1 1 0 0 0 0
.............................................................................................................CCCGATGTCCGATGTCCTCGG......................................................................................................................... 21 1 12 0.08 1 0 1 0 0 0
.........................................................................................................TCGGCCCGATGTCCGATGTC.............................................................................................................................. 20 0 12 0.08 1 1 0 0 0 0
......................................................................................................................................................TCCGATGTCCGACGTCCTTG................................................................................. 20 0 12 0.08 1 0 0 1 0 0
..................................................................GGTCCGATGTCCGGCGTCCTT.................................................................................................................................................................... 21 1 12 0.08 1 1 0 0 0 0
..........................................................................................................CGGCCCGATGTCTGATGTCCT............................................................................................................................ 21 1 12 0.08 1 1 0 0 0 0
..........................................................................................................CGGCCCGATGTCCGATGTCC............................................................................................................................. 20 0 12 0.08 1 0 1 0 0 0
...........................................................................................................GGCCCGATGTCCGATGTCCT............................................................................................................................ 20 0 12 0.08 1 1 0 0 0 0
...........................................................................................................GGCCCGATGTCCGATGTCCTT........................................................................................................................... 21 0 12 0.08 1 1 0 0 0 0
...................................................................GTCCGATGTCCGACGTCCT..................................................................................................................................................................... 19 0 12 0.08 1 1 0 0 0 0
.......................................................................................................CCTCGGCCCGATGGCCGATGTC.............................................................................................................................. 22 1 12 0.08 1 1 0 0 0 0
.....................................................................................................................................................GTCCGATGTCCGACGTCCT................................................................................... 19 0 12 0.08 1 1 0 0 0 0
..........................................................................................................CGGCCCGATGTCCGATTTCCG............................................................................................................................ 21 2 14 0.07 1 0 1 0 0 0
...........................................................................................................GGCCCGATGTCCGATGTTCTT........................................................................................................................... 21 1 14 0.07 1 0 1 0 0 0
.....................................................................................................................................................TTCCGATGTCCGACGTCCTTGG................................................................................ 22 1 15 0.07 1 1 0 0 0 0
.............................................................................................................CACGATGTCCGATGTCCTTTG......................................................................................................................... 21 2 15 0.07 1 0 1 0 0 0
...................................................................TTCCGATGTCCGACGTCCTTGG.................................................................................................................................................................. 22 1 15 0.07 1 1 0 0 0 0
.......................................CGTCCTTGGCCCATCCCCGATG.............................................................................................................................................................................................. 22 0 17 0.06 1 0 1 0 0 0
...................................CCGACGTCCTTGGCACATCCCCGA................................................................................................................................................................................................ 24 1 18 0.06 1 0 0 1 0 0
..............................................................................................................................................................CCGACGTCCTTGGCACATCCCCGA..................................................................... 24 1 18 0.06 1 0 0 1 0 0
..TTTGACCCGTCCTCGATGAC..................................................................................................................................................................................................................................... 20 0 18 0.06 1 1 0 0 0 0
...TTGACCCGTCCTCGATGACCTCG................................................................................................................................................................................................................................. 23 0 18 0.06 1 1 0 0 0 0
...TTGACCCGTCCTTGATGACCT................................................................................................................................................................................................................................... 21 1 18 0.06 1 1 0 0 0 0
..TTTGACCCGTCCTCGATGACCT................................................................................................................................................................................................................................... 22 0 18 0.06 1 1 0 0 0 0
..............................................................................................................................................................CCGACGTCCTTGGCCCATCCCCGA..................................................................... 24 0 18 0.06 1 0 0 1 0 0
......................................................................CGATGTCCGACGTCCTTGGGC................................................................................................................................................................ 21 0 18 0.06 1 0 1 0 0 0
...................................CCGACGTCCTTGGCCCATCCCCGA................................................................................................................................................................................................ 24 0 18 0.06 1 0 0 1 0 0
............................................................................................................................................................GTCCGACGTCCTGGGCCCATC.......................................................................... 21 1 19 0.05 1 1 0 0 0 0
..........GTCCTCGATGACCTCGGCCCG............................................................................................................................................................................................................................ 21 0 19 0.05 1 0 0 1 0 0
.................................GTCCGACGTCCTGGGCCCATC..................................................................................................................................................................................................... 21 1 19 0.05 1 1 0 0 0 0
.........CGTCCTCGATGACCTCGGCCC............................................................................................................................................................................................................................. 21 0 19 0.05 1 0 0 1 0 0
....................................CGACGTCCTTGGCCCATCCCC.................................................................................................................................................................................................. 21 0 19 0.05 1 1 0 0 0 0
.........TGTCCTCGATGACCTCGGCCC............................................................................................................................................................................................................................. 21 1 19 0.05 1 1 0 0 0 0
.......CCCGTCCTCGATGACCTCGG................................................................................................................................................................................................................................ 20 0 19 0.05 1 1 0 0 0 0
...............................................................................................................................................................CGACGTCCTTGGCCCATCCCC....................................................................... 21 0 19 0.05 1 1 0 0 0 0
........CCGTCCTCGATGACCTCGGCCC............................................................................................................................................................................................................................. 22 0 19 0.05 1 1 0 0 0 0
..............................................................................................CCCCGATGACCTCGGCCCGAT........................................................................................................................................ 21 0 20 0.05 1 1 0 0 0 0
...................................................................................CCTTGGGCCATCCCCGATGACC.................................................................................................................................................. 22 0 20 0.05 1 0 1 0 0 0
..................................................................GGTCCGATGTCCGACGTC....................................................................................................................................................................... 18 0 20 0.05 1 1 0 0 0 0
.............................................................................................................................................................................................GGCCCGATGTCCGACGTCC........................................... 19 0 20 0.05 1 1 0 0 0 0
.....................................................................................................................................................................................................................................CGGCCCGATGTCCGACGTCCGT 22 1 20 0.05 1 0 1 0 0 0
....................................................................................................................TCCGATGTCCTTGGCCCATGC.................................................................................................................. 21 1 20 0.05 1 0 1 0 0 0
.........................GGCCCGATGTCCGACGTCC............................................................................................................................................................................................................... 19 0 20 0.05 1 1 0 0 0 0
..................................................................................................................................................................CGTCCTTGGCCCATCCCCGAGC................................................................... 22 2 20 0.05 1 0 1 0 0 0
...............................ATGTCCGACGTCCTTGGCCCA....................................................................................................................................................................................................... 21 0 20 0.05 1 1 0 0 0 0
.........................................................................TGTCTGACGTCCTTTGGTC............................................................................................................................................................... 19 3 20 0.05 1 1 0 0 0 0
.........................................................................................................................................................................................CCTCGGCCGGGTGTCCGACGT............................................. 21 2 20 0.05 1 0 0 1 0 0
..........................GCCCGATGTCCGTCGTCCTTG............................................................................................................................................................................................................ 21 1 20 0.05 1 1 0 0 0 0
.......................................................................................................................................................CCGATGTCCGACGTCCTTGGC............................................................................... 21 0 20 0.05 1 1 0 0 0 0
..........................GCCCGATGTCCGACGTCCTTG............................................................................................................................................................................................................ 21 0 20 0.05 1 0 1 0 0 0
.............................................................................................................................................................CCCGACGTCCTTGGCCCATCC......................................................................... 21 1 20 0.05 1 0 1 0 0 0
.........................................................................................................................................................................................................................CCCCGGTGACCTCGGCCCGGTG............ 22 2 20 0.05 1 1 0 0 0 0
..........................................................................GTCCGACGTCCTTAGGCCATCC........................................................................................................................................................... 22 1 20 0.05 1 0 0 0 1 0
............................................TTGGCCCATCCCCGATGACCT.......................................................................................................................................................................................... 21 0 20 0.05 1 1 0 0 0 0
..................................CCCGACGTCCTTGGCCCATCC.................................................................................................................................................................................................... 21 1 20 0.05 1 0 1 0 0 0
......................................................................................................................................................................................................................................GGCCCGATGTCCGACGTCC.. 19 0 20 0.05 1 1 0 0 0 0
..............................................................................................................................................................................................GCCCGATGTCCGTCGTCCTTG........................................ 21 1 20 0.05 1 1 0 0 0 0
............................CCGATGTCCGACGTCCTTGGC.......................................................................................................................................................................................................... 21 0 20 0.05 1 1 0 0 0 0
........................CGGCCCGATGTCCGACGTCCGT............................................................................................................................................................................................................. 22 1 20 0.05 1 0 1 0 0 0
............................................................................................................................................................................................CGGCCCGATGTCCGACGTCCGT......................................... 22 1 20 0.05 1 0 1 0 0 0
..............................................................................................................................TTGGCCCATCCCCGATGACCT........................................................................................................ 21 0 20 0.05 1 1 0 0 0 0
..............................................................................................CCCCGGTGACCTCGGCCCGGTG....................................................................................................................................... 22 2 20 0.05 1 1 0 0 0 0
........................................GACCTTGGCCCATCCCCGATGAC............................................................................................................................................................................................ 23 1 20 0.05 1 1 0 0 0 0
....................................................................................................................................................GGTCCGATGTCCGACGTC..................................................................................... 18 0 20 0.05 1 1 0 0 0 0
.......................................CGTCCTTGGCCCATCCCCGAGC.............................................................................................................................................................................................. 22 2 20 0.05 1 0 1 0 0 0
..................................TCCGACGTCCTTCGCCCATCC.................................................................................................................................................................................................... 21 1 20 0.05 1 1 0 0 0 0
...........................................................................................................................................................TGTCCGACGTCCTTGGCCCAT........................................................................... 21 0 20 0.05 1 0 0 0 0 1
.................................................................................................TGATGACCTCGGCCCGATG....................................................................................................................................... 19 1 20 0.05 1 0 0 1 0 0
.............................................................................................................................................................TCCGACGTCCTTCGCCCATCC......................................................................... 21 1 20 0.05 1 1 0 0 0 0
..........................................................................................................................................................ATGTCCGACGTCCTTGGCCCA............................................................................ 21 0 20 0.05 1 1 0 0 0 0
.........................................................................................................................................................................................................................CCCCGATGACCTCGGCCCGAT............. 21 0 20 0.05 1 1 0 0 0 0
..............................................................................................................................................................................................GCCCGATGTCCGACGTCCTTG........................................ 21 0 20 0.05 1 0 1 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droAna3 scaffold_13248:849274-849524 + dan_1495 AGAAACTGGGCAGGAGCTACTGGAGCCGGGCTACAGGCTGCAGG-AACCGGGTAGGGGCTACTGGAGCCAGGCTACAGGCTGCAGGAACCCGGTAGGGGCTACTGGAGCCGGGCTACAGGCTACAG---GAACCGGGTAGGGGCTACTGGAGCCAGGCTACAGGCTGCAGGAACCGGGTAGGGGCTATTGGAGCCGGGCTACAGGCTGCAGGAACTGGGTAGGGGCTACTGGAGCCGGGCTACAGGCTGCAGGAA
droBip1 scf7180000395922:39268-39509 + GG-------------GCTACAGGCTCCGATGTACAGCCTGCGGGCTACGGCCTACGGGTTACAGGATACGGGATACTGGCTACGGCTACAGCGTACAGGCTACGGAATACTGGCTACGGCATGTATGCCGTACGGACTACGGGCTACGGAATACTGGCTACGGCATACAGCCTACGGGCTACGGCTTACTGGCTACGGCTACTGGCTACGGCTACAGACTACGGGCTACAGGATCCGATGTACAGCCTACGGGTA
droMoj3 scaffold_6540:27838994-27838995 + AG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droAna3
AGAAACTGGGCAGGAGCTACTGGAGCCGGGCTACAGGCTGCAGG-AACCGGGTAGGGGCTACTGGAGCCAGGCTACAGGCTGCAGGAACCCGGTAGGGGCTACTGGAGCCGGGCTACAGGCTACAG---GAACCGGGTAGGGGCTACTGGAGCCAGGCTACAGGCTGCAGGAACCGGGTAGGGGCTATTGGAGCCGGGCTACAGGCTGCAGGAACTGGGTAGGGGCTACTGGAGCCGGGCTACAGGCTGCAGGAASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
......................................................................................................................................................................................................................CTGGGTAGGGGCTACTGGAGC....................2131.003200001
.........GCAGGAGCTACTGGAGCCGGGC................................................................................................................................................................................................................................22190.79150000015
....................................GCTGCAGG-AACCGGGTAGGGGC....................................................................................................................................................................................................22190.5310000019
...................................................................................................................................................................GCTGCAGGAACCGGGTAGGGGC......................................................................22190.5310000019
..............................................................................................................................................................................CGGGTAGGGGCTATTGGAGCC............................................................2120.501000010
........................................................................................................................CTACAG---GAACCGGGTAGGGGC...............................................................................................................21100.505210002
..................................................................................................GCTACTGGAGCCGGGCTACAG........................................................................................................................................21200.459000018
................................................................................................................................................................................................................................GCTACTGGAGCCGGGCTACAG..........21200.459000018
...............GCTACTGGAGCCGGGCTACAG...........................................................................................................................................................................................................................21200.408000008
.........GCAGGAGCTACTGGAGCCGGG.................................................................................................................................................................................................................................21190.377101014
.......................................GCAGG-AACCGGGTAGGGGC....................................................................................................................................................................................................19190.377000016
......................................................................................................................................................................GCAGGAACCGGGTAGGGGC......................................................................19190.377000016
.......................................................................................................................................................................................GCTATTGGAGCCGGGCTACA....................................................2030.331000001
............................................................................................................................................................................................................GCTGCAGGAACTGGGTAGG................................1960.332100001
............................................................................................................................................................................................................GCTGCAGGAACTGGGTAGGGG..............................2160.332200000
...............................................................................................................................................................................................................GCAGGAACTGGGTAGGGGC.............................1960.332000002
................................................................................................................................................................................GGTAGGGGCTATTGGAGCCGG..........................................................2160.332200000
..................................................................................................................................................................................................CGGGCTACAGGCTGCAGGAACT.......................................2230.331000100
......TGGGCAGGAGCTACTGGAGCC....................................................................................................................................................................................................................................21190.326200004
...................................GGCTGCAGG-AACCGGGTAGGGGC....................................................................................................................................................................................................23190.326000006
..................................................................................................................................................................GGCTGCAGGAACCGGGTAGGGGC......................................................................23190.326000006
...........AGGAGCTACTGGAGCCGGGC................................................................................................................................................................................................................................20190.326101004
........................................................................................................................CTACAG---GAACCGGGTAGGGG................................................................................................................20100.303100002
..............................................................................GCTGCAGGAACCCGGTAGGGGC...........................................................................................................................................................22200.306000006
.................................................................................................................CTACAGGCTACAG---GAACCGGG......................................................................................................................21100.303000003
........................................................................CTACAGGCTGCAGGAACCCGG..................................................................................................................................................................21140.294200002
.........................................................GCTACTGGAGCCAGGCTACA..................................................................................................................................................................................2040.251000100
......................................................GGGGCTACTGGAGCCAGGCTA....................................................................................................................................................................................2140.251100000
..............................................................................................................................................GCTACTGGAGCCAGGCTACA.............................................................................................2040.251000100
................................................................................................................................................TACTGGAGCCAGGCTACAGGC..........................................................................................2140.251010000
...........................................................................................................................................GGGGCTACTGGAGCCAGGCTA...............................................................................................2140.251100000
...........................................................TACTGGAGCCAGGCTACAGGC...............................................................................................................................................................................2140.251010000
.........................................................................................................................TACAG---GAACCGGGTAGGGGCT..............................................................................................................2190.222110000
....................................................................................................................................................................CTGCAGGAACCGGGTAGGG........................................................................19190.214210010
....................................................................................................................................................................CTGCAGGAACCGGGTAGG.........................................................................18190.214400000
....................................................................................................................................................................CTGCAGGAACCGGGTAGGGG.......................................................................20190.214110020
.....................................CTGCAGG-AACCGGGTAGG.......................................................................................................................................................................................................18190.214400000
............GGAGCTACTGGAGCCGGGC................................................................................................................................................................................................................................19190.214000004
.....................................CTGCAGG-AACCGGGTAGGG......................................................................................................................................................................................................19190.214210010
.....................................CTGCAGG-AACCGGGTAGGGG.....................................................................................................................................................................................................20190.214110020
.........................................................................................................................TACAG---GAACCGGGTAGGGTT...............................................................................................................20100.202000002
................................................................................................................GCTACAGGCTACAG---GAACCGG.......................................................................................................................21100.202100001
..........................................................................................................................ACAG---GAACCGGGTAGGGGC...............................................................................................................19100.202000011
............................................................................................................................................................................................................GCTGCAGGAACTGGGTAGGGGC.............................2260.171000001
......................................................................................................................................................................................................CTACAGGCTGCAGGAACTGG.....................................2060.171100000
........................................................................................................................................................................................................ACAGGCTGCAGGAACTGGG....................................1960.171100000
.............................................................................................................................................................................................................CTGCAGGAACTGGGTAGGGGC.............................2160.171000001
............................................................................................................................................................................................................GCTGCAGGAACTGGGTAG.................................1860.171000010
..................................................................................................................................................................................TAGGGGCTATTGGAGCCGGGTG.......................................................2260.171000001
.............................................................................................................................................................................................................CTGCAGGAACTGGGTAGGGT..............................2060.171000001
.........................................................................................................................................................................................................CAGGCTGCAGGAACTGGGTAGGGGC.............................2560.171000001
...............................................................................................................................................................................................................GCAGGAACTGGGTAGGGG..............................1860.171100000
.............................................................................................................................................................................................................CTGCAGGAACTGGGTAGGGGCT............................2260.171100000
...AACTGGGCAGGAGCTACTGGAGCC....................................................................................................................................................................................................................................24180.173000003
.........................................................................................................................................................................................................CAGGCTGCAGGAACTGGGTT..................................2060.171000010
........................................................................................................................................................................................................ACAGGCTGCAGGAACTGGGTA..................................2160.171100000
....................................GCTGCAGG-AACCGGGTAGGGG.....................................................................................................................................................................................................21190.163000012
.....CTGGGCAGGAGCTACTGGAGC.....................................................................................................................................................................................................................................21190.163000003
....................................................................................................................................................................CTGCAGGAACCGGGTAGGGGC......................................................................21190.163120000
...................................................................................................................................................................GCTGCAGGAACCGGGTAGGGG.......................................................................21190.163000012
..........CAGGAGCTACTGGAGCCGGGC................................................................................................................................................................................................................................21190.163100110
.....................................CTGCAGG-AACCGGGTAGGGGC....................................................................................................................................................................................................21190.163120000
...................................................................................................CTACTGGAGCCGGGCTACAGG.......................................................................................................................................21200.153100002
................CTACTGGAGCCGGGCTACAGG..........................................................................................................................................................................................................................21200.153100002
.................................................................................................................................................................................................................................CTACTGGAGCCGGGCTACAGG.........21200.153100002
.........................................................................TACAGGCTGCAGGAACCCGGTAGGGG............................................................................................................................................................26150.132000002
................................................................GAGCCAGGCTACAGGCTGCAG..........................................................................................................................................................................2180.131100000
.....................................................................................................................................................GAGCCAGGCTACAGGCTGCAG.....................................................................................2180.131100000
.........................................................................................................................TACAG---GAACCGGGTAGGGGCTT.............................................................................................................2290.111000001
.......................................................................GCTACAGGCTGCAGGAACCCG...................................................................................................................................................................21180.112000002
..................................................................................................................TACAGGCTACAG---GAACCGGGTAGGGGC...............................................................................................................2790.111000001
.....................................................................................................................................................................TGCAGGAACCGGGTAGGGG.......................................................................19190.112000020
........GGCAGGAGCTACTGGAGCCGGGC................................................................................................................................................................................................................................23190.112000002
..........CAGGAGCTACTGGAGCCGGG.................................................................................................................................................................................................................................20190.112100010
......................................TGCAGG-AACCGGGTAGGGG.....................................................................................................................................................................................................19190.112000020
.....................................................................................................................................................................TGCAGGAACCGGGTAGGGGC......................................................................20190.112000002
.............GAGCTACTGGAGCCGGGC................................................................................................................................................................................................................................18190.112000002
...........AGGAGCTACTGGAGCCGGG.................................................................................................................................................................................................................................19190.112200000
......................................TGCAGG-AACCGGGTAGGGGC....................................................................................................................................................................................................20190.112000002
........................................................................................................................CTACAG---GAACCGGGTAGGGGT...............................................................................................................21100.101000010
................................ACAGGCTGCAGG-AACCGGG...........................................................................................................................................................................................................19200.102200000
...............................................................................CTGCAGGAACCCGGTAGGGG............................................................................................................................................................20200.102101000
.......................................................................................................................................GGTAGGGGCTACTGGAGT......................................................................................................18200.102000002
..............................CTACAGGCTGCAGG-AACCG.............................................................................................................................................................................................................19200.102200000
.....................................................................................................ACTGGAGCCGGGCTACAGG.......................................................................................................................................19200.102100001
.................................................................................................................................GAACCGGGTAGGGGCTACTGGAGCC.....................................................................................................25200.102000002
................................................CGGGTAGGGGCTACTGGAGC...........................................................................................................................................................................................20200.102101000
...............................................................................................................................................................ACAGGCTGCAGGAACCGGG.............................................................................19200.102200000
...................................................................................................................................................................................................................................ACTGGAGCCGGGCTACAGG.........19200.102100001
........................................................................................................................CTACAG---GAACCGGGTAGGGGCC..............................................................................................................22100.101010000
.....................................................................................................ACTGGAGCCGGGCTACAGGC......................................................................................................................................20200.102100010
........................................................................................................................CTACAG---GAACCGGGTAGGG.................................................................................................................19100.101100000
..................ACTGGAGCCGGGCTACAGG..........................................................................................................................................................................................................................19200.102100001
.............................................................................................................................................................CTACAGGCTGCAGGAACCGGG.............................................................................21200.102000002
...........................................................................................GGTAGGGGCTACTGGAGT..................................................................................................................................................18200.102000002
.......................................................................................................................GCTACAG---GAACCGGGTAGGGG................................................................................................................21100.101000010
..................................................GGTAGGGGCTACTGGAGT...........................................................................................................................................................................................18200.102000002
.........................................................................................................................................................................................................................GGTAGGGGCTACTGGAGT....................18200.102000002
..............................CTACAGGCTGCAGG-AACCGGG...........................................................................................................................................................................................................21200.102000002
.................................................................................................................CTACAGGCTACAG---GAACCGG.......................................................................................................................20100.101100000
..................ACTGGAGCCGGGCTACAGGC.........................................................................................................................................................................................................................20200.102100010
.....................................................................................................................................CGGGTAGGGGCTACTGGAGC......................................................................................................20200.102101000
...................................................................................................................................................................................................................................ACTGGAGCCGGGCTACAGGC........20200.102100010
......................................................................................................................GGCTACAG---GAACCGGGTAGGGGC...............................................................................................................23100.101000001
.......................................................................................................................GCTACAG---GAACCGGGTAGG..................................................................................................................19100.101100000
....................................GCTGCAGG-AACCGGGTAGGGGT....................................................................................................................................................................................................22200.102000002
...............................TACAGGCTGCAGG-AACCGG............................................................................................................................................................................................................19200.102000011
..........................................................................................CGGTAGGGGCTACTGGAGCCGG...............................................................................................................................................22200.102100100
...................................................................................................................................................................GCTGCAGGAACCGGGTAGGGGT......................................................................22200.102000002
......................................................................GGCTACAGGCTGCAGGAACC.....................................................................................................................................................................20200.102110000
...........................................G-AACCGGGTAGGGGCTACTGGAGCC..........................................................................................................................................................................................25200.102000002
.......................................................................................................................GCTACAG---GAACCGGGTAGGGGC...............................................................................................................22100.101000001
..........................................................................................................................................................AGGCTACAGGCTGCAGGAACCG...............................................................................22110.091100000
..................................................................................................................TACAGGCTACAG---GAACCGGG......................................................................................................................20110.091100000
...................................................................................................................ACAGGCTACAG---GAACCGGG......................................................................................................................19110.091100000
.........................................................................TACAGGCTGCAGGAACCCGGTAGGGGC...........................................................................................................................................................27140.071000001
........................................................................CTACAGGCTGCAGGAACCCGGTAGGGG............................................................................................................................................................27140.071000001
..........................................................................ACAGGCTGCAGGAACCCGGTAGGGGC...........................................................................................................................................................26140.071000001
.........................................................................TACAGGCTGCAGGAACCCGGTT................................................................................................................................................................22150.071000001
.........................................................................TACAGGCTGCAGGAACCCGGT.................................................................................................................................................................21150.071100000
..........................................................................ACAGGCTGCAGGAACCCGGTA................................................................................................................................................................21150.071000010
..........................................................................ACAGGCTGCAGGAACCCGGTAGGGG............................................................................................................................................................25150.071000001
..........................................................................ACAGGCTGCAGGAACCCGG..................................................................................................................................................................19150.071100000
..............................CTACAGGCTGCAGG-AACCGGGTAGGGGC....................................................................................................................................................................................................28170.061000001
.............................................................................................................................................................CTACAGGCTGCAGGAACCGGGTAGGGGC......................................................................28170.061000001
......................................................................GGCTACAGGCTGCAGGAACCCG...................................................................................................................................................................22170.061000001
..AAACTGGGCAGGAGCTACTGGAGCC....................................................................................................................................................................................................................................25180.061000001
....ACTGGGCAGGAGCTACTGG........................................................................................................................................................................................................................................19180.061000010
..................................................................................................................................................................GGCTGCAGGAACCGGGTAGGGGCT.....................................................................24180.061000001
..AAACTGGGCAGGAGCTACT..........................................................................................................................................................................................................................................19180.061000001
....................................................................................................................................................................CTGCAGGAACCGGGTAGGGGCT.....................................................................22180.061100000
.....................................CTGCAGG-AACCGGGTAGGGGCT...................................................................................................................................................................................................22180.061100000
...................................GGCTGCAGG-AACCGGGTAGGGGCT...................................................................................................................................................................................................24180.061000001
....ACTGGGCAGGAGCTACTGGAG......................................................................................................................................................................................................................................21180.061100000
................................................................................................................................................................CAGGCTGCAGGAACCGGGTAG..........................................................................21190.051100000
.......................................GCAGG-AACCGGGTAGGGG.....................................................................................................................................................................................................18190.051000001
........GGCAGGAGCTACTGGAGCC....................................................................................................................................................................................................................................19190.051100000
.........GCAGGAGCTACTGGAGCCGG..................................................................................................................................................................................................................................20190.051000010
...................................................................................................................................................................GCTGCAGGAACCGGGTAGGG........................................................................20190.051001000
................................................................................................................................................................CAGGCTGCAGGAACCGGGTAGGGG.......................................................................24190.051000001
.................................CAGGCTGCAGG-AACCGGGTAGGGG.....................................................................................................................................................................................................24190.051000001
....................................GCTGCAGG-AACCGGGTAGGT......................................................................................................................................................................................................20190.051000010
......TGGGCAGGAGCTACTGGAGC.....................................................................................................................................................................................................................................20190.051100000
..........CAGGAGCTACTGGAGCCG...................................................................................................................................................................................................................................18190.051100000
...................................................................................................................................................................GCTGCAGGAACCGGGTAGG.........................................................................19190.051000001
...................................GGCTGCAGG-AACCGGGTAGGG......................................................................................................................................................................................................21190.051000001
...........AGGAGCTACTGGAGCCGGGCTT..............................................................................................................................................................................................................................22190.051000001
.......GGGCAGGAGCTACTGGAGC.....................................................................................................................................................................................................................................19190.051100000
.................................CAGGCTGCAGG-AACCGGGTAG........................................................................................................................................................................................................21190.051100000
................................................................................................................................................................CAGGCTGCAGGAACCGGGTAGGG........................................................................23190.051000001
.................................CAGGCTGCAGG-AACCGGGTAGGG......................................................................................................................................................................................................23190.051000001
....................................GCTGCAGG-AACCGGGTAGG.......................................................................................................................................................................................................19190.051000001
..................................................................................................................................................................GGCTGCAGGAACCGGGTAGGG........................................................................21190.051000001
........GGCAGGAGCTACTGGAGCCGG..................................................................................................................................................................................................................................21190.051100000
...................................................................................................................................................................GCTGCAGGAACCGGGTAGGT........................................................................20190.051000010
......TGGGCAGGAGCTACTGGAGCCGGGC................................................................................................................................................................................................................................25190.051000001
......................................................................................................................................................................GCAGGAACCGGGTAGGGG.......................................................................18190.051000001
..................................................................................................................................................................GGCTGCAGGAACCGGGTAGGGG.......................................................................22190.051000001
.....CTGGGCAGGAGCTACTGG........................................................................................................................................................................................................................................18190.051000001
...................................GGCTGCAGG-AACCGGGTAGGGG.....................................................................................................................................................................................................22190.051000001
....................................GCTGCAGG-AACCGGGTAGGG......................................................................................................................................................................................................20190.051001000
...............................................................................................GGGGCTACTGGAGCCGGGCTACAGG.......................................................................................................................................25200.051100000
...............GCTACTGGAGCCGGGCTACAGG..........................................................................................................................................................................................................................22200.051000001
..............................................................................................................................................................TACAGGCTGCAGGAACCGGG.............................................................................20200.051100000
.....................................CTGCAGG-AACCGGGTAGGGGCTT..................................................................................................................................................................................................23200.051100000
......................................................................................AACCCGGTAGGGGCTACTGGAGC..................................................................................................................................................23200.051000001
...............................................................................CTGCAGGAACCCGGTAGGG.............................................................................................................................................................19200.051100000
............................................................................................................................................................GCTACAGGCTGCAGGAACCGGG.............................................................................22200.051000001
..............................................................................................................................................................TACAGGCTGCAGGAACCG...............................................................................18200.051100000
................................................................................TGCAGGAACCCGGTAGGGGCTT.........................................................................................................................................................22200.051001000
..............................................................................................AGGGGCTACTGGAGCCGGGCTACA.........................................................................................................................................24200.051100000
...............................................................................CTGCAGGAACCCGGTAGGGGCT..........................................................................................................................................................22200.051000001
...........................................................................................GGTAGGGGCTACTGGAGCCGGGC.............................................................................................................................................23200.051000001
.................................CAGGCTGCAGG-AACCGGGTA.........................................................................................................................................................................................................20200.051100000
................CTACTGGAGCCGGGCTACA............................................................................................................................................................................................................................19200.051000001
................................................................................................................................................................CAGGCTGCAGGAACCGGGTA...........................................................................20200.051100000
.............................................................................................................................................................CTACAGGCTGCAGGAACCGGGT............................................................................22200.051100000
............................................................................................................................................................................................................................AGGGGCTACTGGAGCCGGGCTT.............22200.051000001
................CTACTGGAGCCGGGCTACAGGC.........................................................................................................................................................................................................................22200.051010000
.............................................................................................................................................................................................................................GGGGCTACTGGAGCCGGGC...............19200.051000001
...........................................................................CAGGCTGCAGGAACCCGGTAGG..............................................................................................................................................................22200.051000001
.................................................................................................................................................................................................................................CTACTGGAGCCGGGCTACA...........19200.051000001
.....................................................................................................................................CGGGTAGGGGCTACTGGAGCC.....................................................................................................21200.051100000
..............................................................................GCTGCAGGAACCCGGTAGGG.............................................................................................................................................................20200.051000001
.........................................................................................................................................................................................................................GGTAGGGGCTACTGGAGCCGGGC...............23200.051000001
....................................................................................................................................CCGGGTAGGGGCTACTGGAGC......................................................................................................21200.051100000
......TGGGCAGGAGCTACTGTT.......................................................................................................................................................................................................................................18200.051100000
..............................CTACAGGCTGCAGG-AACCGGGT..........................................................................................................................................................................................................22200.051100000
..................................................................................CAGGAACCCGGTAGGGGCTAC........................................................................................................................................................21200.051000001
...................................................................................................CTACTGGAGCCGGGCTACA.........................................................................................................................................19200.051000001
...............................................CCGGGTAGGGGCTACTGGAGC...........................................................................................................................................................................................21200.051100000
...............................................................................CTGCAGGAACCCGGTAGGTT............................................................................................................................................................20200.051000010
....................................................................................................................................................................CTGCAGGAACCGGGTAGGGGCTT....................................................................23200.051100000
..................................................................................................GCTACTGGAGCCGGGCTAC..........................................................................................................................................19200.051100000
.............................................................................................................................................................CTACAGGCTGCAGGAACCGG..............................................................................20200.051000010
...............................TACAGGCTGCAGG-AACCGGG...........................................................................................................................................................................................................20200.051100000
...................................................................................................CTACTGGAGCCGGGCTACAGGC......................................................................................................................................22200.051010000
...........................................................................................................................................................GGCTACAGGCTGCAGGAACC................................................................................20200.051100000
................................................CGGGTAGGGGCTACTGGAGCC..........................................................................................................................................................................................21200.051100000
................................................................................................................................................................................................................................GCTACTGGAGCCGGGCTACAGG.........22200.051000001
............................................................................................................................................................................................................................AGGGGCTACTGGAGCCGGGCTACAGGCTG......29200.051000001
....................................GCTGCAGG-AACCGGGTAGGTT.....................................................................................................................................................................................................21200.051100000
............................................................................................................................AG---GAACCGGGTAGGGGCTACT...........................................................................................................21200.051100000
...................CTGGAGCCGGGCTACAGGC.........................................................................................................................................................................................................................19200.051000001
..............................................................................................AGGGGCTACTGGAGCCGGGCTT...........................................................................................................................................22200.051000001
...........................................................................................................................................................................................................................TAGGGGCTACTGGAGCCGGGCT..............22200.051000001
..................................................................................CAGGAACCCGGTAGGGGC...........................................................................................................................................................18200.051100000
..........................................................................................CGGTAGGGGCTACTGGAGC..................................................................................................................................................19200.051000010
..........................................................................................................................................................................................................................GTAGGGGCTACTGGAGCCGGT................21200.051100000
.............................................................................................TAGGGGCTACTGGAGCCGGGCT............................................................................................................................................22200.051000001
...................................................................................AGGAACCCGGTAGGGGCTACT.......................................................................................................................................................21200.051100000
droBip1
GG-------------GCTACAGGCTCCGATGTACAGCCTGCGGGCTACGGCCTACGGGTTACAGGATACGGGATACTGGCTACGGCTACAGCGTACAGGCTACGGAATACTGGCTACGGCATGTATGCCGTACGGACTACGGGCTACGGAATACTGGCTACGGCATACAGCCTACGGGCTACGGCTTACTGGCTACGGCTACTGGCTACGGCTACAGACTACGGGCTACAGGATCCGATGTACAGCCTACGGGTASizeHit CountTotal NormTotal
No Reads
droMoj3
AG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads

Generated: 05/18/2015 at 02:12 AM