ID:

dan_1461

 Coordinate:

scaffold_13230:558687-558837 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-20.6 -20.6 -20.6

Flybase annnotation

CDS [Dana\GF15848-cds]; exon [dana_GLEANR_1661:1]; intron [Dana\GF15848-in]

Repeatable elements

NameClassFamilyStrand
AT_richLow_complexityLow_complexity+
Hoana1DNAhAT-hobo-
mature
star
  1. scaffold_771:75-99 +
  2. scaffold_6408:3385-3409 +
  3. scaffold_7839:20-44 -
  4. scaffold_9803:1860-1884 +
  5. scaffold_10355:6434-6458 -
  6. scaffold_12389:8494-8518 -
  7. scaffold_12916:12018651-12018675 +
  8. scaffold_13082:3395571-3395595 -
  9. scaffold_13082:3531031-3531055 -
  10. scaffold_13112:32553-32577 -
  11. scaffold_13137:1314032-1314056 -
  12. scaffold_13146:78468-78492 +
  13. dan_1461  scaffold_13230:558714-558738 -
  14. scaffold_13250:909533-909557 +
  15. scaffold_13261:250151-250175 +
  16. scaffold_13277:31301-31325 -
  17. scaffold_13337:23246494-23246518 -
  18. scaffold_13417:5503170-5503194 -
  19. scaffold_13744:210800-210824 -
  20. scaffold_13767:1402623-1402647 -

Sense Strand Reads

-------------------------------------------#######---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
TTTAAAAATAGCAAAGTGGTGCCATATTCGATCGTTCAGTTATATGGCAGGTATGAAATACGGTCGGCCGATATTTATGAAATTTGGCAGATCGGATCGGCCAAATATAACATGGCCAAATATAAAAATTATATTTATATATATATATGTATATTAGGGTGGGTCGATTGAAAAATCGCTTAGGCACATATGATTTTCGGATTCTAGGGATCAAAATAAGAAACTTTGCTCAAGAGACCATACCTCTAAAA
************************************************************************.................(((((.(((.(((.((((((.((((.....(((((((.......))))))).....))))))))))..))).)))))))).....***************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M044
female body
 M058
embryo
 V055
head
 V039
embryo
 V105
male body		 V106
head
........................................................................ATTTATGAAATTTGGCAGATCGGATCGGC...................................................................................................................................................... 29 0 1 1.00 1 0 1 0 0 0 0
............AAAGTGGTGCCATATTCGATCG......................................................................................................................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0 0
..................................................................................................................................................................................................................................TGCTCAAGAGACCATACCTCT.... 21 0 20 0.50 10 10 0 0 0 0 0
...................................................................................TTGGCAGATCGGGACGGC...................................................................................................................................................... 18 2 2 0.50 1 0 0 1 0 0 0
.......................................................................................................................................................................................GCACATATGATTTTCGGATTCTAGG........................................... 25 0 20 0.45 9 7 2 0 0 0 0
.......................................................................................................................................................................................GCACATATGATTTTCGGATTCTAGGGA......................................... 27 0 20 0.45 9 9 0 0 0 0 0
.......................................................................................................................................................................................GCACATATGATTTTCGGATTCTAGGGAT........................................ 28 0 20 0.30 6 6 0 0 0 0 0
.....................................................................GATATTTAAGAAATTTGGCGGG................................................................................................................................................................ 22 3 5 0.20 1 0 0 1 0 0 0
................................................................................................................................................................................................................................TTTGCTCAAGAGACCATACCT...... 21 0 20 0.15 3 2 0 0 0 0 1
................................................AGGTGTGCAATACGGTCGC........................................................................................................................................................................................ 19 3 9 0.11 1 1 0 0 0 0 0
.....................................................................................................................................................................GTTTGAAAAATGGCTTCGGC.................................................................. 20 3 20 0.10 2 2 0 0 0 0 0
.....................................................................................................................................................TATATTAGGGTGGGTCGATTGAAAA............................................................................. 25 0 20 0.10 2 2 0 0 0 0 0
...................................................................................................................................................TGTATATTAGGGTGGGTCGATCGAAAA............................................................................. 27 1 12 0.08 1 0 0 0 1 0 0
....................................................................................................................................................GTATATTAGGGTGGGTCGATTGAAAAA............................................................................ 27 0 12 0.08 1 1 0 0 0 0 0
..............AGGGGTGCCATATTGTATC.......................................................................................................................................................................................................................... 19 3 14 0.07 1 0 0 0 1 0 0
...................................................................................................................................................TGTATATTAGGGTGGGTCGAT................................................................................... 21 0 14 0.07 1 0 1 0 0 0 0
............................................TGGCAGGGTTGAAATTCGG............................................................................................................................................................................................ 19 3 20 0.05 1 0 0 1 0 0 0
.......................................................................................................................................................................................GCACATATGATTTTCGGATTCTAGGG.......................................... 26 0 20 0.05 1 0 1 0 0 0 0
........................................................................................................................................................................................................................TAAGAAACTTTGCTCAGGAGACCATA......... 26 1 20 0.05 1 1 0 0 0 0 0
.......................................................................................................................................................................................GCACATATGATTTTCTGATTCTAGGG.......................................... 26 1 20 0.05 1 0 0 0 1 0 0
..................................................................................................................................................................................................................................TGCTCAAGAGACCATACCTCTAA.. 23 0 20 0.05 1 1 0 0 0 0 0
..............................................................................................................................................................................................................................ACTTTGCTCAAGAGACCATA......... 20 0 20 0.05 1 1 0 0 0 0 0
......................................................................................................................................................................CTTGAAAGATCGCTTCGGC.................................................................. 19 3 20 0.05 1 0 0 0 0 1 0
.....................................................................................................................................................TATATTAGGGTGGGTCGATTGAAAAAT........................................................................... 27 0 20 0.05 1 1 0 0 0 0 0
......................................................................................................................................................................................GGCACATATGATTTTCGGATT................................................ 21 0 20 0.05 1 0 0 0 0 0 1
.....................................................................................................................................................TATATTAGGGTGGGTCGATTGAAAAATC.......................................................................... 28 0 20 0.05 1 1 0 0 0 0 0
...............................TCGTTCAGTTATATGGCAGGT....................................................................................................................................................................................................... 21 0 20 0.05 1 1 0 0 0 0 0
.......................................................................................................................................................................................GCACATATGATTTTCGGATTCTAG............................................ 24 0 20 0.05 1 0 0 0 0 1 0
...........................................................................................................................................................................................................................GAAACTTTGCTCAAGAGACCATACCTC..... 27 0 20 0.05 1 0 1 0 0 0 0
........................................................................................................................................................................................................................TAAGAAACTTTGCTCAAGAGACCATA......... 26 0 20 0.05 1 0 0 0 0 1 0
............................................................................................................................................................................................................TAGGGATCAAAATAAGAAACT.......................... 21 0 20 0.05 1 1 0 0 0 0 0
................................................................................................................................................................................................................................TTTGCTCAAGAGGCCATACCTC..... 22 1 20 0.05 1 0 0 0 0 0 1

Anti-sense strand reads

AAATTTTTATCGTTTCACCACGGTATAAGCTAGCAAGTCAATATACCGTCCATACTTTATGCCAGCCGGCTATAAATACTTTAAACCGTCTAGCCTAGCCGGTTTATATTGTACCGGTTTATATTTTTAATATAAATATATATATATACATATAATCCCACCCAGCTAACTTTTTAGCGAATCCGTGTATACTAAAAGCCTAAGATCCCTAGTTTTATTCTTTGAAACGAGTTCTCTGGTATGGAGATTTT
*****************************************************************************.................(((((.(((.(((.((((((.((((.....(((((((.......))))))).....))))))))))..))).)))))))).....************************************************************************ 		Read size # Mismatch Hit Count Total Norm Total M044
female body
 M058
embryo
 V105
male body		 V039
embryo
 V106
head
....................CGGTATAAGCTAGCAAGTCAA.................................................................................................................................................................................................................. 21 0 2 0.50 1 0 1 0 0 0
.................................................................................................................................................................................................................................AACGAGTTCTCTGGTATGGAG..... 21 0 20 0.30 6 6 0 0 0 0
...............................AGCAAGTCAATATACCGTCCA....................................................................................................................................................................................................... 21 0 20 0.15 3 3 0 0 0 0
...............................................................................................................................................................................AGCGAATCCGTGTATACTAAAAGCCT.................................................. 26 0 20 0.10 2 1 1 0 0 0
.............................................................................................................................................................................................................................TTGAAACGAGTTCTCTGGTAT......... 21 0 20 0.10 2 1 0 1 0 0
..................................................................................................................................................................................................................................ACGAGTTCTCTGGTATGGAG..... 20 0 20 0.10 2 2 0 0 0 0
....................................................................................................................................................................................ATCCGTGTATACTAAAAGCCT.................................................. 21 0 20 0.05 1 0 0 0 0 1
.............................................................................................................................................................................TTAGCGAATCCGTGTATACTAA........................................................ 22 0 20 0.05 1 1 0 0 0 0
..............................................................................................................................................................................................................................TGAAACGAGTTCCCTGGTATG........ 21 1 20 0.05 1 1 0 0 0 0
..............................................................................................................................................................................................................CCCTAGTTTTATTCTTTGAA......................... 20 0 20 0.05 1 1 0 0 0 0
.................................................................................................................................................................................................AAAAGCCTAAGATCCCTAGTTTT................................... 23 0 20 0.05 1 0 1 0 0 0
...................................................................................................................................................................................................................................CGAGTTCTCTGGTATGGAGAT... 21 0 20 0.05 1 1 0 0 0 0
.....................................................................................................................................................................CTAACTTTTTAGCGAATCCGTGTATACT.......................................................... 28 0 20 0.05 1 1 0 0 0 0
....................................................................................................................................................................................................AGCCTAAGATCCCTAGTTTTAT................................. 22 0 20 0.05 1 0 0 0 1 0
...............................................................................................................................................................................TGCGAATCCGTGTATAGTAAAAGCC................................................... 25 2 20 0.05 1 1 0 0 0 0
..............................................................................................................................................................................................................CCCTAGTTTTATTCTTTGAAA........................ 21 0 20 0.05 1 1 0 0 0 0
.............................CTAGCAAGTCAATATACC............................................................................................................................................................................................................ 18 0 20 0.05 1 0 1 0 0 0
....................................................................................................................................................................................................................................GAGTTCTCTGGTATGGAGA.... 19 0 20 0.05 1 0 0 1 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droAna3 scaffold_13230:558637-558887 - dan_1461 TTTAAAAATAGCAAAGTGGTG-----------CCAT----------------------A--TTCGATCGTTCAGTTATATGGCAGGTATGAAATACGGTCGGCCGATATTTATGAAATTTGGCAGATCGGATCG----------------GCCAAATATAACATGGCCAAATATAAAAATTATATTT----A----------------T----------ATATATATATGT----------ATAT-----------------TA-GGGTG--------GGTCGATTGAAAAATCGCTTAGGCA---------CAT------ATGATTTTCGGATTCT--------------------------------------------------------AG-GGATCAAAATAAGAAACTTTGCTCAAGAGACCATACCTCTAAAA
droBip1 scf7180000392463:2439-2685 + TTCAAAATCACGAAAGTTGGG-----------TCAT----------------------T--TCCGATCGTTCAGTTATATGGCAGCTATAGGATATAGTCGGCCGATCCTTATGTAATTTGGCATGTCGTAATGTTTTGCCAAA---------------------------AATATAA-----TT----TTGGACAAAATTATAATTTTGGTCAAAAGTGTGCT------ATAGCTGCCA-------------------------------TATAACTGAACGATCGGAAATGGTTTTTGGTA---------GAA------AT-----------------------------------------------------ACCAACTTTCGTATTTTTGAAGATAGAAGCTTGATACTTTGTTTGAG-----------------
droKik1 scf7180000302355:1053216-1053404 - TTGAAAAACAACGAAGTTATA-----------ATGT----------TTTTTCTATTAATTTCCCGATCGTT----CCTATGGCAGCTATAAGATATAGTCGTCCGATATTCATAAAATTTT----------------TACCAAAATTCTGAAATAATATAATATGGTCATATGT---------------------------------------------AAAAA------ATAGTGCACA-------------------------------TAT---------GTTGAAAAACAGCTAAGTT-----------------AT-----------------AATT-------------------------------------------------------------------------------------TTTTTCTAAAAAT
droFic1 scf7180000454095:19058-19123 - TATGACGATTTCCAT--------------------------------------------------ATTGTT----CATATGACAGCTATATGATATAGTCGTCCGATTTTGATGAAATTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droEle1 scf7180000489694:22705-22833 - TTAAAAAACACCAAAGTTATG-----------TCAA----------------------T--TCCGAACGTTTAGTTATTTGGCAGCTATACGATATAGTCGGCTGATCCTTATGTATTTTG-TAGTTCGGTTCAATTGACAAAA---------------------------AATACAATCCATTCTTATTT--------------------------------------------------A------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droRho1 scf7180000775924:3736-3980 + TTTAAAAACACCAAAGTTATG-----------GCAT----------------------T--TCCGATCAATCAGTTATATGGCGGCTATAGGATATAGTCGGCCGATCCTTATGAAATTTGGTAGGTTGGATTGATTGGCCAAA---------------------------AACAAAACCCATAGTTA--------------------------------------------------GGAATTTGGTATTTTTTTGAGTATTAAGAATG--------CATCATATG--------------------------------------------AATAATTTTGGAGAATATAATTTACAAAATATTCTGCAAGGGTATATCAACTTCGG-------------------------CTCCGCCCAAAGTAGCTTTCCT------
droBia1 scf7180000302506:53081-53185 + TTAGAAAACACCGAAGATTTA-----------ATTTTATCATATTATTTCACCACTAAATTTTTGATCGTT----CCTATGGCAGCTATATGATATAGTCGCCCGATTTTGATAAAATTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droTak1 scf7180000413235:29467-29595 + TACATACATT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAT----A----------------C----------ATACATGTATAT----------ACAT-----------------TA-GGGTG--------GGTCGATTTGGAGGTCAACAAATCG---------TAG------GGGGGGAACGTATTCT--------------------------------------------------------AG-AGACTATTCTAAGCAACATTGCCAAAGAAACTATGCCTTGGAAA
droEug1 scf7180000407619:547-622 - ATATAATATATATA-GATAT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATATA------TATATATATA-------------------------------TAA---------GTAGAGAAACCG-----------------TATATACAT-----------------AAAATACATAAAAT---------TTT---------------------------------------------------C------------------------
dp5 2:25264180-25264290 + TTTGAAGGAT-------------------------------------------------------------CAGAACTATCGTATCTATTTGATATGGTTGACCGATTCTACTGAAATTTGGTACAGTCACCCG----------------GCTATTAACAATCATGCTAAACTACAAATTTAAAT----TTA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droPer2 scaffold_56:95400-95435 - ATATATATATATAT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAT----A----------------T----------ATATATATATGT----------ATAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droWil2 scf2_1100000000514:5726-5866 - TTTAAAAATAACAAAGTTATTGACAAAAGTCACTCT----------------------T--TTCGACCGTCCGTTCCTATGGGAGCTATATGATATAGTCAGCCGATCTTGATCAAATTTGGCATAGTCGTTTATATGTAAAAT---------------------------AAACTCATCAATATTAAATT--------------------------------------------------T------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droMoj3 scaffold_6500:21953045-21953188 + CCTATTATAATAATACCTA------------------------------------------------------------TTATAATAATAAT-------------------------------------------------------------------------------------------ATAT----A----------------T----------ATATATATATATATATATATGTATATTGTTTTTTTTTCAGCATTTTTAAATTTGA---------TT-----------------GCAGAAGGTGTAT------TTAATTTATGAATTCTTAAGATGAATAAAAT-----------------------------------------------------------ACTTT------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droAna3
TTTAAAAATAGCAAAGTGGTG-----------CCAT----------------------A--TTCGATCGTTCAGTTATATGGCAGGTATGAAATACGGTCGGCCGATATTTATGAAATTTGGCAGATCGGATCG----------------GCCAAATATAACATGGCCAAATATAAAAATTATATTT----A----------------T----------ATATATATATGT----------ATAT-----------------TA-GGGTG--------GGTCGATTGAAAAATCGCTTAGGCA---------CAT------ATGATTTTCGGATTCT--------------------------------------------------------AG-GGATCAAAATAAGAAACTTTGCTCAAGAGACCATACCTCTAAAASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
...........................................................................................................ATTTATGAAATTTGGCAGATCGGATCG----------------GC................................................................................................................................................................................................................................................................................................2911.001010000
............AAAGTGGTG-----------CCAT----------------------A--TTCGATCG...................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
...............................................................................................................................................................................................................................................................................................................................................................................................................................TGCTCAAGAGACCATACCTCT....21200.50101000000
............................................................................................................................................................................................................................................................................................................GCA---------CAT------ATGATTTTCGGATTCT--------------------------------------------------------AG-G...........................................25200.459720000
............................................................................................................................................................................................................................................................................................................GCA---------CAT------ATGATTTTCGGATTCT--------------------------------------------------------AG-GGA.........................................27200.459900000
............................................................................................................................................................................................................................................................................................................GCA---------CAT------ATGATTTTCGGATTCT--------------------------------------------------------AG-GGAT........................................28200.306600000
.............................................................................................................................................................................................................................................................................................................................................................................................................................TTTGCTCAAGAGACCATACCT......21200.153200001
......................................................................................................................................................................................................................................T----------ATAT-----------------TA-GGGTG--------GGTCGATTGAAAA.....................................................................................................................................................25200.102200000
.....................................................................................................................................................................................................................................GT----------ATAT-----------------TA-GGGTG--------GGTCGATTGAAAAA....................................................................................................................................................27120.081100000
....................................................................................................................................................................................................................................TGT----------ATAT-----------------TA-GGGTG--------GGTCGAT...........................................................................................................................................................21140.071010000
............................................................................................................................................................................................................................................................................................................GCA---------CAT------ATGATTTTCGGATTCT--------------------------------------------------------AG-GG..........................................26200.051010000
...............................................................................................................................................................................................................................................................................................................................................................................................................................TGCTCAAGAGACCATACCTCTAA..23200.051100000
...........................................................................................................................................................................................................................................................................................................................................................................................................................ACTTTGCTCAAGAGACCATA.........20200.051100000
......................................................................................................................................................................................................................................T----------ATAT-----------------TA-GGGTG--------GGTCGATTGAAAAAT...................................................................................................................................................27200.051100000
...........................................................................................................................................................................................................................................................................................................GGCA---------CAT------ATGATTTTCGGATT.........................................................................................................21200.051000001
......................................................................................................................................................................................................................................T----------ATAT-----------------TA-GGGTG--------GGTCGATTGAAAAATC..................................................................................................................................................28200.051100000
..................................................................TCGTTCAGTTATATGGCAGGT.................................................................................................................................................................................................................................................................................................................................................................21200.051100000
............................................................................................................................................................................................................................................................................................................GCA---------CAT------ATGATTTTCGGATTCT--------------------------------------------------------AG-............................................24200.051000010
........................................................................................................................................................................................................................................................................................................................................................................................................................GAAACTTTGCTCAAGAGACCATACCTC.....27200.051010000
.....................................................................................................................................................................................................................................................................................................................................................................................................................TAAGAAACTTTGCTCAAGAGACCATA.........26200.051000010
................................................................................................................................................................................................................................................................................................................................................T--------------------------------------------------------AG-GGATCAAAATAAGAAACT..........................21200.051100000
droBip1
TTCAAAATCACGAAAGTTGGG-----------TCAT----------------------T--TCCGATCGTTCAGTTATATGGCAGCTATAGGATATAGTCGGCCGATCCTTATGTAATTTGGCATGTCGTAATGTTTTGCCAAA---------------------------AATATAA-----TT----TTGGACAAAATTATAATTTTGGTCAAAAGTGTGCT------ATAGCTGCCA-------------------------------TATAACTGAACGATCGGAAATGGTTTTTGGTA---------GAA------AT-----------------------------------------------------ACCAACTTTCGTATTTTTGAAGATAGAAGCTTGATACTTTGTTTGAG-----------------SizeHit CountTotal NormTotal
No Reads
droKik1
TTGAAAAACAACGAAGTTATA-----------ATGT----------TTTTTCTATTAATTTCCCGATCGTT----CCTATGGCAGCTATAAGATATAGTCGTCCGATATTCATAAAATTTT----------------TACCAAAATTCTGAAATAATATAATATGGTCATATGT---------------------------------------------AAAAA------ATAGTGCACA-------------------------------TAT---------GTTGAAAAACAGCTAAGTT-----------------AT-----------------AATT-------------------------------------------------------------------------------------TTTTTCTAAAAATSizeHit CountTotal NormTotal
No Reads
droFic1
TATGACGATTTCCAT--------------------------------------------------ATTGTT----CATATGACAGCTATATGATATAGTCGTCCGATTTTGATGAAATTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
TTAAAAAACACCAAAGTTATG-----------TCAA----------------------T--TCCGAACGTTTAGTTATTTGGCAGCTATACGATATAGTCGGCTGATCCTTATGTATTTTG-TAGTTCGGTTCAATTGACAAAA---------------------------AATACAATCCATTCTTATTT--------------------------------------------------A------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
TTTAAAAACACCAAAGTTATG-----------GCAT----------------------T--TCCGATCAATCAGTTATATGGCGGCTATAGGATATAGTCGGCCGATCCTTATGAAATTTGGTAGGTTGGATTGATTGGCCAAA---------------------------AACAAAACCCATAGTTA--------------------------------------------------GGAATTTGGTATTTTTTTGAGTATTAAGAATG--------CATCATATG--------------------------------------------AATAATTTTGGAGAATATAATTTACAAAATATTCTGCAAGGGTATATCAACTTCGG-------------------------CTCCGCCCAAAGTAGCTTTCCT------SizeHit CountTotal NormTotal
No Reads
droBia1
TTAGAAAACACCGAAGATTTA-----------ATTTTATCATATTATTTCACCACTAAATTTTTGATCGTT----CCTATGGCAGCTATATGATATAGTCGCCCGATTTTGATAAAATTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droTak1
TACATACATT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAT----A----------------C----------ATACATGTATAT----------ACAT-----------------TA-GGGTG--------GGTCGATTTGGAGGTCAACAAATCG---------TAG------GGGGGGAACGTATTCT--------------------------------------------------------AG-AGACTATTCTAAGCAACATTGCCAAAGAAACTATGCCTTGGAAASizeHit CountTotal NormTotal
No Reads
droEug1
ATATAATATATATA-GATAT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATATA------TATATATATA-------------------------------TAA---------GTAGAGAAACCG-----------------TATATACAT-----------------AAAATACATAAAAT---------TTT---------------------------------------------------C------------------------SizeHit CountTotal NormTotal
No Reads
dp5
TTTGAAGGAT-------------------------------------------------------------CAGAACTATCGTATCTATTTGATATGGTTGACCGATTCTACTGAAATTTGGTACAGTCACCCG----------------GCTATTAACAATCATGCTAAACTACAAATTTAAAT----TTA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.................................................................................................GTTGACCGATTCTACTGAAAT..................................................................................................................................................................................................................................................................................................................................2141.2550000000500
droPer2
ATATATATATATAT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAT----A----------------T----------ATATATATATGT----------ATAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
No Reads
droWil2
TTTAAAAATAACAAAGTTATTGACAAAAGTCACTCT----------------------T--TTCGACCGTCCGTTCCTATGGGAGCTATATGATATAGTCAGCCGATCTTGATCAAATTTGGCATAGTCGTTTATATGTAAAAT---------------------------AAACTCATCAATATTAAATT--------------------------------------------------T------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
No Reads
droMoj3
CCTATTATAATAATACCTA------------------------------------------------------------TTATAATAATAAT-------------------------------------------------------------------------------------------ATAT----A----------------T----------ATATATATATATATATATATGTATATTGTTTTTTTTTCAGCATTTTTAAATTTGA---------TT-----------------GCAGAAGGTGTAT------TTAATTTATGAATTCTTAAGATGAATAAAAT-----------------------------------------------------------ACTTT------------------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads

Generated: 05/18/2015 at 01:58 AM