ID:

dan_1433

 Coordinate:

scaffold_13137:1038280-1038430 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-29.0 -28.9 -28.9

Flybase annnotation

CDS [Dana\GF19146-cds]; exon [dana_GLEANR_2086:1]; intron [Dana\GF19146-in]

Repeatable elements

NameClassFamilyStrand
Helitron-2N1_DVirRCHelitron-
mature
  1. scaffold_12947:893400-893422 +
  2. scaffold_12948:533277-533299 +
  3. scaffold_13077:108643-108665 +
  4. scaffold_13082:1936663-1936685 +
  5. scaffold_13099:340623-340645 -
  6. scaffold_13099:2672479-2672501 +
  7. dan_1433  scaffold_13137:1038308-1038330 -
  8. scaffold_13228:522966-522988 +
  9. scaffold_13337:20403475-20403497 -
  10. scaffold_13339:1337342-1337364 -
star

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
AGAATTGTTCTCTAGAGCAGCAACGCAATATGGCACAGGCGCTTATCGAGGTGAGTTAGGTTCCTTATGAATATGTCAGATTTTATATAGCTAAGATTTGGTAAGAGCAAAGTTCTTATTTGAAGTCATTTATTTATTATTATTAACTTACTATATTTATACCCTTGCAGAGGGTATTATAATTTTGGTCAAAAGTGTGCAACGCAGTGAAGGAGACATCTCCGACCCTATAAAGTATATATATTCTTAAT
**************************************************(((((((((.......(((((((.(((((((((((......)))))))))((((((((...))))))))........)).))))))).....))))))))).......((((((((...))))))))........................************************************************** 		Read size # Mismatch Hit Count Total Norm Total V105
male body		 V106
head
 V055
head
 M058
embryo
 V039
embryo
..............................................................................................GATTTGGTAAGAGCATAGCTGT....................................................................................................................................... 22 3 1 1.00 1 1 0 0 0 0
..............................................................................................GATTTGGTAAGAGCATAGCT......................................................................................................................................... 20 2 1 1.00 1 1 0 0 0 0
..................................ACAGGCGCTTATCGAGGT....................................................................................................................................................................................................... 18 0 1 1.00 1 0 1 0 0 0
................................................................................................................................................................................................AAGTGTGCAACGCAGTGAAGGAGA................................... 24 0 20 0.75 15 15 0 0 0 0
..............................................................................................GATTTAGTAAGAGCATAGCT......................................................................................................................................... 20 3 5 0.20 1 0 1 0 0 0
.......................................CGCTTATGGAGGTGTGATAG................................................................................................................................................................................................ 20 3 5 0.20 1 0 0 1 0 0
.........................................................................................................AGCCAAGTTTTTATTTGGAGTC............................................................................................................................ 22 3 6 0.17 1 0 0 0 0 1
...............................................................................................................GTTCTTAGTTGGAGTGATTT........................................................................................................................ 20 3 14 0.14 2 2 0 0 0 0
.............................ATGTGACAGGCGCTTATC............................................................................................................................................................................................................ 18 2 7 0.14 1 0 0 0 1 0
............................................................................................AAGGTGTGGTAAGAGCACA............................................................................................................................................ 19 3 20 0.10 2 2 0 0 0 0
......................................................................................................................................................CTATATTTATACCCTTGCAGAGG.............................................................................. 23 0 10 0.10 1 0 0 0 1 0
................GCTGCATCGCTATATGGCAC....................................................................................................................................................................................................................... 20 3 11 0.09 1 0 1 0 0 0
..................................................................................................CGGTAAGAGTAAAGGTCTT...................................................................................................................................... 19 3 20 0.05 1 0 0 1 0 0
..............................................................................................GATTTGATAAGAGCATAGCT......................................................................................................................................... 20 3 20 0.05 1 1 0 0 0 0

Anti-sense strand reads

TCTTAACAAGAGATCTCGTCGTTGCGTTATACCGTGTCCGCGAATAGCTCCACTCAATCCAAGGAATACTTATACAGTCTAAAATATATCGATTCTAAACCATTCTCGTTTCAAGAATAAACTTCAGTAAATAAATAATAATAATTGAATGATATAAATATGGGAACGTCTCCCATAATATTAAAACCAGTTTTCACACGTTGCGTCACTTCCTCTGTAGAGGCTGGGATATTTCATATATATAAGAATTA
**************************************************(((((((((.......(((((((.(((((((((((......)))))))))((((((((...))))))))........)).))))))).....))))))))).......((((((((...))))))))........................************************************************** 		Read size # Mismatch Hit Count Total Norm Total V039
embryo
 M044
female body
 M058
embryo
 V105
male body		 V055
head
..............................................GCTCCACTCATTCCATGGACT........................................................................................................................................................................................ 21 3 1 1.00 1 1 0 0 0 0
...........................................................................................................................................................................................CAGTTTTCACACGTTGCGTCACTT........................................ 24 0 20 0.20 4 0 0 4 0 0
........................................................................................................................................................................................AACCAGTTTTCACACGTTGCG.............................................. 21 0 20 0.15 3 0 3 0 0 0
.....................................................................................................................................................................................................................TCTGTAGAGGCTGGGATATTTCATAT............ 26 0 20 0.15 3 0 3 0 0 0
....................................................................................................................................................................................................CACGTTGCGTCACTTCCTCTGT................................. 22 0 20 0.10 2 0 2 0 0 0
................................................................................................................................................................................................TTCACACGTTGCGTCACTTCC...................................... 21 0 20 0.10 2 0 0 0 2 0
................................................TCAACTCAGACCAAGGAATA....................................................................................................................................................................................... 20 3 12 0.08 1 0 0 0 0 1
...........................................................................................................................................................................................................CGTCACTTCCTCTGTAGAGGC........................... 21 0 20 0.05 1 0 0 1 0 0
...................................................................................................................................................................................ATTAAAACCAGTTTTCACACGTTGCG.............................................. 26 0 20 0.05 1 1 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droAna3 scaffold_13137:1038230-1038480 - dan_1433 AGAA-TTGTTC--------------TCTAGAGCAGCAA--------------------CGCA-ATA---------------TGGCACAGGCGCTTATCGAG---------------------------------------------------------------------GTGAGT------------------------------------------------TAGGTTC---CTTA--TGA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATATGTCAGATTTTATATAGCTAAGATTTGGT---------------A--AGAG--C-------------------------------------------------A---------------------AA---------------------GTTCTTATTTGAAGTCATTTATTTAT------------------------TATTAT---------TAAC--------------------T---------TAC------TATATTTA-----------TACCCTTGCA--------GAGGGTATTATAATTTTGG-TCA--------AAAGTGTGCAACGCAGTGAAGGAGACATCTCCGACCCTATAAAGTATATATATTCTTAAT
droBip1 scf7180000394934:5284-5469 + ATA--------GAA---------------------GTG--------------------CGTA-ATT---------------TCTTAAGTG------------------------------------------TA-------------------------------------------------------------------------------------------------------------------TCATGACTTTTGTGGAACTAAA-TTTAA--------------------------------------------------------------------------------------------------------------------GATTTTTTTAAGTTTTTC------T----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T------------------------------ATTTTTAGA---------AGT------TGTTATTA-----------TACCCTTGCA--------GAGGGTATTATAATTTTGG-TCA--------AAAGTGTGCAACGCAGTGAAGGAGACATCTCCGACCCTATAAAGTATATATATTCTTGAT
droKik1 scf7180000298808:44832-45063 - GTATTTTA-------T----------TCACAATAATAA--------------------C--A-AT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTATTTCCATAGGCTT-----------------------------------TAGTGTA--------AACA------------------------AGATTAACT-----TCATAGA----------------------------------------------------------------------------ATAT-----------------------------A-ATAATCTGAATAGTTCAAAAAGTTA---------------------AA---------------------GTTACTATTT----ACATTTATA---------------------------------AATATCATA----T-------------------A---------TTT------AATTTTTA-----------TACCCTTGC----------AGGGTATTATAAATTCAG-TCA--------GAAGTTTGCAACGCAGTGAAGGAGACGTTTCCGACCCTATAAAGAATATATATTCTTGAT
droFic1 scf7180000454082:525991-526265 + AGA--------TGT-----------------------G--------------------CGTTCACTTTAGAATTAAT--TTTGACACATTTGCCGACCAAG---------------------------------------------------------------------GTAATT------------------------------------------------AAATTGC---TTTA--------------AAAATT-----------------------------------------------TTGAAGGTGGCAAATGAAT-----------ATTTTTTACTACAAAGTCAGCATTAATATTTTAAAGAGATGTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTTTATG---------------------------------ATTAACAAA----TAATTACTTC--AG-----------CTGCCGTC------TATTTTTA-----------TACCCTTGCA--GAGCA-AAGGGTATTATAATTTTGG-CCA--------GAAGTTTGCAACGCAGTGAAGGAGACACCTCAGACCCCATAAAGTATATATATTCTTGAT
droEle1 scf7180000491025:67669-67917 - CTAA-TTA-------TTCGATGGTTTCTATGGCAGCTA--------------------TATA-AT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTGATTCCCGATTT------GAATA---------------------------------------------------------------------------------------------------------------AAA----------TT-----AAAAGCGAAACTCTGAATT--GTTAAACTAAT----------------------------------TATATGTATAAAAGAAT-----------------------------------------------T--------------------------------ACAAAAATAAGAATTGAAAAAATTACTATTTATTTTC-----------------------------------------------------------------------------------ATT------TATTTTTA-----------TACCCTTGCA--------GAGGATATTATAATTTCAG-TCA--------AAAGTTTGCAACGCAGTGAAGGAGATATCTCCGACCCTATAAAGTATATATATTCTTGAT
droRho1 scf7180000774272:13179-13407 - TCC--------TT--------------TTGAAAAATAA--------------------CGTA-ATA------------TTATGAAGTAAT---TTTGTTA---------------------------------------------------------------------------------------------------------------------------------------GTATTTAAATATTA-----------------------------------------------------------------------------------------------------------------------------TATATTTATATATTA----AATTATATTTA-----------------------TT-----GAAAGTAAA-----AAA----------ATTTTTTTAAGAACTTATG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGATTATTCATTTTTTTGATTT-----------TACCCTTGCA--------GAGGGTATTATAATTTTGG-TCA--------AAAGTGTGCAACGCAGTGAAGGAGACATCTCCGACCCAATAAAGTATATATATTCTTGAT
droBia1 scf7180000301696:47030-47276 + AAT---TATTT--------------TTTACAACTGCAA--------------------GGG-----------------------------------------------------------------------TA-------------------------------------------------------------------------------------------------------------------TATAAACT-TCGGCTTACCGAA-GTTAA--------------------------------------------------------------------------------------------------------------------CTTCCTTTCTTGTTTTTTTTTAAA----------TTCC---ATC---------------------ATACAATT--------------CATATAC------------------TTTCATAAAAA-----------------------------------------------TCATAGAGTTC-------------------------------AAGTTTTTAATATAAA------------------------------------------------------------------------------ACTTTTAAT---------AAC------CATTTGTT-----------TACCGTTGCA--------GAGGGTATAATGACTTTAG-TCC--------AAAGTGTGCAACGCAGTGAAGGAGACGTTTTCGACCCCGTAAAA-ATATTTATGCATGAT
droTak1 scf7180000414295:85093-85328 + TTC--------TT--------------CACAGCGAAAA--------------------AACA-ATC---------------CAG------------------------------------------------CA-------------------------------------------------------------------------------------------------------------------TCTAGACTT-----------------------------------------------TTGACGGGAACTAGTGGGT---------------TATATTTCACAGTCAGGAATAGTATTCCCAAGTCATGTATCTACATCTAA----AATGTTGTTTAAAATTTC------GTGATT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A----T-------------------A---------TTT------TATTTTTA-----------TACCCTTGCA--------GAGGGTATTATGATTTCAG-TCA--------GAAGTTTGCAACGCAGTGAAGGAGACGTTTCCGACCCCATAAAGTATATATATTCGTGAT
droEug1 scf7180000409711:598403-598668 - AAT---CGTTC--------------TTTTG-GTAGCAT--------------------TACA-ATA---------------AATC---------------------------------------------------------------------------------------AAAT------------------------------------------------TATAATA---TTTA--TTA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTGGTAGAGTTTTTATAAATATAATT-----CAAT----TTAAGGATAT-----------------------------A----------------------------------------------------------------------ATTTTCTTTGGTTTTCGTTTACTCATATAATTTTACTACAACAACGTAGTACTAAT---------CTAG------------------------------TTA------CATTTTTATACCCGTTACT------CGTA--GAGTAAAAGGGTATACTAGATTCGT-TGA--------AAAGTATGTAACAGATAGAAGGAAGCTTTTGCGACCCTATAAAGTATATATATTCTTGAT
dm3 chr3L:20048796-20049038 - AAG--------AGG---------------GTACAGGCT--------------------AAGG----------------ATAAGTTAT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTATTACCTTATTTATAATTTAATATAATA---------ATAAGATGATCTCTAT----------------------------------------------A--------------------------AAGTT------TTAAATTTAT----TTTAAATTTATT-----AAATTGCTTTATTCACTT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAT------TAGTTCTTAACCCGTTACT------CGTA--GACTAAAAGGGTATACTAGATCCGT-TAAAAAGTATTTATGTGTGTAACATGCAGAAGAAAGTGATTCCGACTATATAAAGTATATATATTCTTGAT
droSim2 node_104224:5204-5435 + CGT---TATTT--------------ACTA---TAGTCA---GTCACCAGGTTGAGTTGCGCG-ACTT----TTAAAT--TTTTCAATATCTTCTTACCAAT---------------------------------------------------------------------TTTGTTAAATATCAATTTGTTAAACATCAATTGAACCTTATTT-AAAGACATATTTGAGTTG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GT---------TAAC--------------------T---------TTG------TA-AATTACCACCTCC---------------------ATTTGTATATAAATCATGGTTGA--------GAAGTAAGC--------AAAGTTCGTGTTTCCGACCACATAGATTATATACATTCTTGAT
droSec2 scaffold_26:247124-247356 - ACA--------GGCAT-----------------------------------------------------------------------------TTATTCAGGATTTGCGAGTCACCATAGA-----------TATATAAGTTTATATAAGTATGCCGAAACTGGAACAAGTGAGATCAAAAACAATAAGTTATAC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTGCTTATTATTTATT------T----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T------------------------------ATTTT--GA---------TAT------TATTTTTATACCCGTTACG------CGTA--GAATAAAAGGGTATACTAGATTGGC-TGA--------AAAGTATATAACAGGCAAAAGGAAGC------GACTTTTAAAAGTATATATATTCTTGCA
droYak3 v2_chr2L_random_010:327638-327884 + AGT---TGCCG--------------TCTAGA-TGGAAACAGATTATCGAACAAAAC---GGC-GCA-----------TATTTGAA------------------------------------CTAAATCCGAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAC------------------------------------------------------------------------------------------------------------------------------------------TGTAACACTTTTTATAAAGC----------------------------------------------------------------------------------ATTGAATAAAGAGCAAAAAAGCGGAAG---------------------GGAGATATTTGA-----------------------------------------------------CAAC-------CTT----------A---------TAT------TATATTTATACCCGTTACT------CGTA--GAGTAAAAGGGTATACTAGATTCGT-TGA--------AAAGTATTTAACAGGTAGAAGGAAGCGTTTCTGACCATATAAAGTATATATATTCTATAT
droEre2 scaffold_4784:25040138-25040370 + GCT--------ATG-------------TG---ACACCG--------------------CACA-ATC---------------TCTTATAAT---TATATTA---------------------------------------------------------------------------------------------------------------------------------------TTATACAA------------------------------------------------------------------------------------------GGACTT-----------------------------------TAAACTT--------GATA------------------------ATACCAACA-----TTAAAGAGCAGA-----TAA----------AACTTTAAAAGTTCCTGAGAGAC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATTCT---------CAAA------------------------------TTG------AATAATTATACCCGTTACT------CGTA--GAGTAAAAGGGTATACTAGATTCGT-TGA--------AAAGTATGTAATAGGCAGAAGAAAACGTTTCCGACCATATAAAGTATATATATTCTTGAT
dp5 Unknown_group_137:4978-5205 - TTT--------TCAA-----------------TGTGAA-----------------------------------------------------------------------------------------------------------------------------------------T------------------------------------------------TGAATGT---CGTATTCAAGTGTCG-CAT--TTT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------TT-----GAGAGCGGAA------------------------------------------------ATTTGAGTTATC----T-----------------------------CAATTAAATTTTT----------------------------------------------------------------------TTCCTCAATCTTCTTTGATG---------------------------------AATA-----------------------------T---------TGC------TATTATTATACCCGATACT------CAAAATGAGTATTGGGGTATATTAGATTTGT-GGTAAAA-GTGGATGTGTGTAACGTCCAGAAGGAATCGTTTCCGACCCTATAAAGTATATATATTCTTGAT
droPer2 scaffold_368:13511-13737 - TCT--------CTAAG----------------CCACAA--------------------CTGA-CTA---------------TGGCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTC-----------------------------------------------TTAATGGGGTGTGGTAAAT-----------ACTC-----------------------------------TCTACTT--------GAAG------------------------CTGCTGTTAG----TTAAAAAATATT-----TAATTCTTTTAAGCTATT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGT------ATTTATTATACCCGATACT------CAAAATGAGTATTGGGGTATATTAGATTTGT-GGTAAAA-GTGGATGTGTGTAACGTCCAAAAGGAATCGTTTCCGACCCCATAAAGTATATATATTCTTGAT
droWil2 scf2_1100000004949:1800427-1800699 - TTG-----ATG--------------TCTATAAGAGCCA--------------------CGAA-ATT---------------TGTCACACACAC----CCAG---------------------------------------------------------------------------------------------------ATGAAGTTTATTTCAAAGGGAAATTGAAGGTGTGTGAATTCAAATGCCA-----------------------------------------------------------------------------TTTCTGTTGGTAT-----------------------------------TAATGTG--------AA-----------------------------------------------------------------------------------------------------CTTTGGT---------------A--TCAGTACAACTTCTACTTTTGCAAGTAATTGTGG--------------------------------------------------------------------------------------------------------------------CTCCTAT---------CAAAT-------------------T---------GGC------CATTTTTA-----------TACCCTTGCA------AAAAGGGTATATTAATTTTGG-TCA--------GAAGTGTGCAACGCATAGAAGGAAGCATTTCCGACCATATAAAGTATATATATTCTTGAT
droVir3 scaffold_12891:231565-231770 + TTT--------A-----------------GAGAAATAA--------------------CGTA-ATA---------------TGTTGTAAT---T-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AT----------------------------------------------------------------------------------------------------------------------------------------------------------------TTTAAATTTATT-----GAATATCTTTTTTT---------------TTTT----------------------------------------------------------------------------------TTAAAGTGTTA-------------------------------AAGATTT----------------AA-----------------------------------------------------AAGC-------ATAAAAATTTGTTT---------ATACAT---TTTTATAA-----------TACCGTTGCA--------GAGGGTTTTATAATTTTTT-CGT--------GAAATGTGTAACGCATAGAAGGAGACATCTCCGACCCCATAAAGTATATATATTCTTATT
droMoj3 scaffold_6482:1828601-1828859 + ATA--------TTTAT----------CTAGTACAAGCT--------------------CATA----------------ATATGAAATAT------------------------------------A---------------------------------------------------------------------------------------------------------------------------------TT-GCGGTT-----AGTTTGATATTCATACAAAAATC------CAATT---------------------------------------------------------------------------------------------------------------ATA----------TTCC---ATATGTGATATTATATGTT--CATATAAT-----------------------------AGT-----CAAG----TTAAGGAAA-----------------------------------------------T--------------------------------ACAATTATTTA-------------------------------------------------------------------------------------------AATTGGGATACACCCATTACATA----TATCCCTGAATCCG----------TTCC-------AAGTAGGTATAATGTTTTTAT-AAA--------AATATATGTAACTATCAGAAGGAGATGTGGCAGACCCCACAAAGTATATATATTCTTGAT
droGri2 scaffold_15203:980052-980255 + AAC--------CCGAT----------CTGGCAAAG--------------------T---GCT-CGA-----------GATGTTAA------------------------------------TTATATACGTT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CATGT--------------------------------------------------------------------------------------------------------------ATGTGTCCATGTGTGTATGTGCACGTATGG-----------------GTAAGTA--T---------------------------------------------------------------------------------------------------------------------------------------------------------ATCGTT----C-------------------G---------TTT------GTTTATTATGCCCTCAACA------TGAA--CTGAAAGAGGGTGTTATGATGAAGT-GCA--------AATGTATGTAATAGGCAGAAGGAAGCATATCCGAACCTATAAAGTA----CATTCTAGAT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droAna3
AGAA-TTGTTC--------------TCTAGAGCAGCAA--------------------CGCA-ATA---------------TGGCACAGGCGCTTATCGAG---------------------------------------------------------------------GTGAGT------------------------------------------------TAGGTTC---CTTA--TGA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATATGTCAGATTTTATATAGCTAAGATTTGGT---------------A--AGAG--C-------------------------------------------------A---------------------AA---------------------GTTCTTATTTGAAGTCATTTATTTAT------------------------TATTAT---------TAAC--------------------T---------TAC------TATATTTA-----------TACCCTTGCA--------GAGGGTATTATAATTTTGG-TCA--------AAAGTGTGCAACGCAGTGAAGGAGACATCTCCGACCCTATAAAGTATATATATTCTTAATSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.....................................................................................ACAGGCGCTTATCGAG---------------------------------------------------------------------GT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000001
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGTGTGCAACGCAGTGAAGGAGA...................................24200.75150000150
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C------TATATTTA-----------TACCCTTGCA--------GAGG.......................................................................................23100.101010000
droBip1
ATA--------GAA---------------------GTG--------------------CGTA-ATT---------------TCTTAAGTG------------------------------------------TA-------------------------------------------------------------------------------------------------------------------TCATGACTTTTGTGGAACTAAA-TTTAA--------------------------------------------------------------------------------------------------------------------GATTTTTTTAAGTTTTTC------T----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T------------------------------ATTTTTAGA---------AGT------TGTTATTA-----------TACCCTTGCA--------GAGGGTATTATAATTTTGG-TCA--------AAAGTGTGCAACGCAGTGAAGGAGACATCTCCGACCCTATAAAGTATATATATTCTTGATSizeHit CountTotal NormTotal
No Reads
droKik1
GTATTTTA-------T----------TCACAATAATAA--------------------C--A-AT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTATTTCCATAGGCTT-----------------------------------TAGTGTA--------AACA------------------------AGATTAACT-----TCATAGA----------------------------------------------------------------------------ATAT-----------------------------A-ATAATCTGAATAGTTCAAAAAGTTA---------------------AA---------------------GTTACTATTT----ACATTTATA---------------------------------AATATCATA----T-------------------A---------TTT------AATTTTTA-----------TACCCTTGC----------AGGGTATTATAAATTCAG-TCA--------GAAGTTTGCAACGCAGTGAAGGAGACGTTTCCGACCCTATAAAGAATATATATTCTTGATSizeHit CountTotal NormTotal
No Reads
droFic1
AGA--------TGT-----------------------G--------------------CGTTCACTTTAGAATTAAT--TTTGACACATTTGCCGACCAAG---------------------------------------------------------------------GTAATT------------------------------------------------AAATTGC---TTTA--------------AAAATT-----------------------------------------------TTGAAGGTGGCAAATGAAT-----------ATTTTTTACTACAAAGTCAGCATTAATATTTTAAAGAGATGTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTTTATG---------------------------------ATTAACAAA----TAATTACTTC--AG-----------CTGCCGTC------TATTTTTA-----------TACCCTTGCA--GAGCA-AAGGGTATTATAATTTTGG-CCA--------GAAGTTTGCAACGCAGTGAAGGAGACACCTCAGACCCCATAAAGTATATATATTCTTGATSizeHit CountTotal NormTotal
No Reads
droEle1
CTAA-TTA-------TTCGATGGTTTCTATGGCAGCTA--------------------TATA-AT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTGATTCCCGATTT------GAATA---------------------------------------------------------------------------------------------------------------AAA----------TT-----AAAAGCGAAACTCTGAATT--GTTAAACTAAT----------------------------------TATATGTATAAAAGAAT-----------------------------------------------T--------------------------------ACAAAAATAAGAATTGAAAAAATTACTATTTATTTTC-----------------------------------------------------------------------------------ATT------TATTTTTA-----------TACCCTTGCA--------GAGGATATTATAATTTCAG-TCA--------AAAGTTTGCAACGCAGTGAAGGAGATATCTCCGACCCTATAAAGTATATATATTCTTGATSizeHit CountTotal NormTotal
No Reads
droRho1
TCC--------TT--------------TTGAAAAATAA--------------------CGTA-ATA------------TTATGAAGTAAT---TTTGTTA---------------------------------------------------------------------------------------------------------------------------------------GTATTTAAATATTA-----------------------------------------------------------------------------------------------------------------------------TATATTTATATATTA----AATTATATTTA-----------------------TT-----GAAAGTAAA-----AAA----------ATTTTTTTAAGAACTTATG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGATTATTCATTTTTTTGATTT-----------TACCCTTGCA--------GAGGGTATTATAATTTTGG-TCA--------AAAGTGTGCAACGCAGTGAAGGAGACATCTCCGACCCAATAAAGTATATATATTCTTGATSizeHit CountTotal NormTotal
No Reads
droBia1
AAT---TATTT--------------TTTACAACTGCAA--------------------GGG-----------------------------------------------------------------------TA-------------------------------------------------------------------------------------------------------------------TATAAACT-TCGGCTTACCGAA-GTTAA--------------------------------------------------------------------------------------------------------------------CTTCCTTTCTTGTTTTTTTTTAAA----------TTCC---ATC---------------------ATACAATT--------------CATATAC------------------TTTCATAAAAA-----------------------------------------------TCATAGAGTTC-------------------------------AAGTTTTTAATATAAA------------------------------------------------------------------------------ACTTTTAAT---------AAC------CATTTGTT-----------TACCGTTGCA--------GAGGGTATAATGACTTTAG-TCC--------AAAGTGTGCAACGCAGTGAAGGAGACGTTTTCGACCCCGTAAAA-ATATTTATGCATGATSizeHit CountTotal NormTotal
No Reads
droTak1
TTC--------TT--------------CACAGCGAAAA--------------------AACA-ATC---------------CAG------------------------------------------------CA-------------------------------------------------------------------------------------------------------------------TCTAGACTT-----------------------------------------------TTGACGGGAACTAGTGGGT---------------TATATTTCACAGTCAGGAATAGTATTCCCAAGTCATGTATCTACATCTAA----AATGTTGTTTAAAATTTC------GTGATT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A----T-------------------A---------TTT------TATTTTTA-----------TACCCTTGCA--------GAGGGTATTATGATTTCAG-TCA--------GAAGTTTGCAACGCAGTGAAGGAGACGTTTCCGACCCCATAAAGTATATATATTCGTGATSizeHit CountTotal NormTotal
No Reads
droEug1
AAT---CGTTC--------------TTTTG-GTAGCAT--------------------TACA-ATA---------------AATC---------------------------------------------------------------------------------------AAAT------------------------------------------------TATAATA---TTTA--TTA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTGGTAGAGTTTTTATAAATATAATT-----CAAT----TTAAGGATAT-----------------------------A----------------------------------------------------------------------ATTTTCTTTGGTTTTCGTTTACTCATATAATTTTACTACAACAACGTAGTACTAAT---------CTAG------------------------------TTA------CATTTTTATACCCGTTACT------CGTA--GAGTAAAAGGGTATACTAGATTCGT-TGA--------AAAGTATGTAACAGATAGAAGGAAGCTTTTGCGACCCTATAAAGTATATATATTCTTGATSizeHit CountTotal NormTotal
No Reads
dm3
AAG--------AGG---------------GTACAGGCT--------------------AAGG----------------ATAAGTTAT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTATTACCTTATTTATAATTTAATATAATA---------ATAAGATGATCTCTAT----------------------------------------------A--------------------------AAGTT------TTAAATTTAT----TTTAAATTTATT-----AAATTGCTTTATTCACTT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAT------TAGTTCTTAACCCGTTACT------CGTA--GACTAAAAGGGTATACTAGATCCGT-TAAAAAGTATTTATGTGTGTAACATGCAGAAGAAAGTGATTCCGACTATATAAAGTATATATATTCTTGATSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGTATACTAGATCCGT-TA.....................................................................1912.0020000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGGGTATACTAGATCCGT-T......................................................................2151.4070000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000120000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATACTAGATCCGT-TAAAAAG................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................TTTAAATTTATT-----AAATTGCT..............................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTA--GACTAAAAGGGTATACTAGA.............................................................................2430.3310000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAACCCGTTACT------CGTA--GA...............................................................................................1930.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T------CGTA--GACTAAAAGGGTA....................................................................................1870.2920000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TA--GACTAAAAGGGTATACTAG..............................................................................2140.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TA--GACTAAAAGGGTATACTAGAT............................................................................2340.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTACT------CGTA--GACTAAAAGGG......................................................................................2140.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAGGGTATACTAGATCCGT-T......................................................................2250.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TA--GACTAAAAGGGTATACT................................................................................1950.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCGACTATATAAAGTATATATAT.......24200.2040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGGGTATACTAGATCCG.........................................................................1850.2010000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGGTATACTAGATCCGT-.......................................................................1870.1410000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T------CGTA--GACTAAAAGGGTATC..................................................................................2080.1310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCGACTATATAAAGTATATATATT......25200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................TTTAAATTTATT-----AAATTGCTTA............................................................................................................................................................................................................................................................................................................................................................................................................22170.0610000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCCGACTATATAAAGTATATATATTC.....27200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTATATAAAGTATATATATTCTTGA.26200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATATAAAGTATATATATTCTTGAT25200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
CGT---TATTT--------------ACTA---TAGTCA---GTCACCAGGTTGAGTTGCGCG-ACTT----TTAAAT--TTTTCAATATCTTCTTACCAAT---------------------------------------------------------------------TTTGTTAAATATCAATTTGTTAAACATCAATTGAACCTTATTT-AAAGACATATTTGAGTTG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GT---------TAAC--------------------T---------TTG------TA-AATTACCACCTCC---------------------ATTTGTATATAAATCATGGTTGA--------GAAGTAAGC--------AAAGTTCGTGTTTCCGACCACATAGATTATATACATTCTTGATSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.............................................................................................................................................................................................................................TATTTGAGTTG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GT---------TAAC--------------------T---------T........................................................................................................................................1911.00100000000001000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGA--------GAAGTAAGC--------AAAGTTCGTG.................................2211.00100000000001000000
..........T--------------ACTA---TAGTCA---GTCACCAGGTTGAGT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000000100000000
........................................................TGCGCG-ACTT----TTAAAT--TTTTCAATATC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000000010000000
......................................................................................................................................................................................................................AAAGACATATTTGAGTTG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GT---------...........................................................................................................................................................................2011.00100000000001000000
...........................TA---TAGTCA---GTCACCAGGTTGAGTTGCGCG-A......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................3011.00100000010000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCATGGTTGA--------GAAGTAAGC--------AAAGTT.....................................2511.00100000001000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTTTCCGACCACATAGATTATATA..........2511.00100000001000000000
droSec2
ACA--------GGCAT-----------------------------------------------------------------------------TTATTCAGGATTTGCGAGTCACCATAGA-----------TATATAAGTTTATATAAGTATGCCGAAACTGGAACAAGTGAGATCAAAAACAATAAGTTATAC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTGCTTATTATTTATT------T----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T------------------------------ATTTT--GA---------TAT------TATTTTTATACCCGTTACG------CGTA--GAATAAAAGGGTATACTAGATTGGC-TGA--------AAAGTATATAACAGGCAAAAGGAAGC------GACTTTTAAAAGTATATATATTCTTGCASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
No Reads
droYak3
AGT---TGCCG--------------TCTAGA-TGGAAACAGATTATCGAACAAAAC---GGC-GCA-----------TATTTGAA------------------------------------CTAAATCCGAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAC------------------------------------------------------------------------------------------------------------------------------------------TGTAACACTTTTTATAAAGC----------------------------------------------------------------------------------ATTGAATAAAGAGCAAAAAAGCGGAAG---------------------GGAGATATTTGA-----------------------------------------------------CAAC-------CTT----------A---------TAT------TATATTTATACCCGTTACT------CGTA--GAGTAAAAGGGTATACTAGATTCGT-TGA--------AAAGTATTTAACAGGTAGAAGGAAGCGTTTCTGACCATATAAAGTATATATATTCTATATSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
................................TGGAAACAGATTATCGAACAAAAC---GG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26120.831004100000005
..................................................................................................................................AT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAC------------------------------------------------------------------------------------------------------------------------------------------TGTAACACTTTTTATAAAGC----------------------------------------------------------------------------------A...........................................................................................................................................................................................................................................................................................26140.7110010000000000
................................TGGAAACAGATTATCGAACAAAAC---G..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25120.17202000000000
................................TGGAAACAGATTATCGAACAAAAC---...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24120.17202000000000
.......................................................................................................................................................................................................................................................................................................................................CAC------------------------------------------------------------------------------------------------------------------------------------------TGTAACACTTTTTATAAAGC----------------------------------------------------------------------------------ATT.........................................................................................................................................................................................................................................................................................26140.14202000000000
.............................................................C-GCA-----------TATTTGAA------------------------------------CTAAATCCG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21100.10101000000000
................................................AACAAAAC---GGC-GCA-----------TATTTGAA------------------------------------CTAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26100.10101000000000
...............................................................................TTTGAA------------------------------------CTAAATCCGAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAC------------------------------------------------------------------------------------------------------------------------------------------TGTAACACC.........................................................................................................................................................................................................................................................................................................................................................................................29100.10100100000000
.............................................................................TATTTGAA------------------------------------CTAAATCCGAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAC------------------------------------------------------------------------------------------------------------------------------------------TGTAACA...........................................................................................................................................................................................................................................................................................................................................................................................29100.10100100000000
...........................TAGA-TGGAAACAGATTATCGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21110.09100000100000
.............................................TCGAACAAAAC---GGC-GCA-----------TATTTGAA------------------------------------C............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26110.09101000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAGCGGAAG---------------------GGAGATATTTGA-----------------------------------------------------CAAC-------C...............................................................................................................................................................28120.08100100000000
........................................GATTATCGAACAAAAC---GGC-GCA-----------T........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23120.08100100000000
.................................GGAAACAGATTATCGAACAAAAC---GG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25120.08101000000000
..................................................................................................................................AT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAC------------------------------------------------------------------------------------------------------------------------------------------TGTAACACTTTTTATAAAGC----------------------------------------------------------------------------------AT..........................................................................................................................................................................................................................................................................................27140.07101000000000
.................................................................................................................................GAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAC------------------------------------------------------------------------------------------------------------------------------------------TGTAACACTTTTTATAAAGC----------------------------------------------------------------------------------A...........................................................................................................................................................................................................................................................................................27140.07101000000000
..................................................................................................................................AT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAC------------------------------------------------------------------------------------------------------------------------------------------TGTAACACTTTTTATAAAG...............................................................................................................................................................................................................................................................................................................................................................................24140.07101000000000
..................................................................................................................................AT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAC------------------------------------------------------------------------------------------------------------------------------------------TGTAACACTTTTTATAAAGC----------------------------------------------------------------------------------ATT.........................................................................................................................................................................................................................................................................................28140.07101000000000
...................................................................................................................................T---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAC------------------------------------------------------------------------------------------------------------------------------------------TGTAACACTTTTTATAAAGC----------------------------------------------------------------------------------A...........................................................................................................................................................................................................................................................................................25140.07101000000000
..................................................................................................................................AT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAC------------------------------------------------------------------------------------------------------------------------------------------TGTAACACTTTTTATAAAGC----------------------------------------------------------------------------------............................................................................................................................................................................................................................................................................................25140.07101000000000
..........................................................................................................................TAAATCCGAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAC------------------------------------------------------------------------------------------------------------------------------------------TGTAACAC..........................................................................................................................................................................................................................................................................................................................................................................................21150.07101000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTAGATTCGT-TGA--------AAAGT.......................................................19200.05100100000000
droEre2
GCT--------ATG-------------TG---ACACCG--------------------CACA-ATC---------------TCTTATAAT---TATATTA---------------------------------------------------------------------------------------------------------------------------------------TTATACAA------------------------------------------------------------------------------------------GGACTT-----------------------------------TAAACTT--------GATA------------------------ATACCAACA-----TTAAAGAGCAGA-----TAA----------AACTTTAAAAGTTCCTGAGAGAC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATTCT---------CAAA------------------------------TTG------AATAATTATACCCGTTACT------CGTA--GAGTAAAAGGGTATACTAGATTCGT-TGA--------AAAGTATGTAATAGGCAGAAGAAAACGTTTCCGACCATATAAAGTATATATATTCTTGATSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAGGGTATACTAGATTCGT-.......................................................................21200.1020000200
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TA--GAGTAAAAGGGTATACTAGATTC..........................................................................25200.0510000100
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATACCCGTTACT------CGTA--GAGT.............................................................................................21200.0510001000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGTTTCCGACCATATAAAGT...............22200.0510000010
dp5
TTT--------TCAA-----------------TGTGAA-----------------------------------------------------------------------------------------------------------------------------------------T------------------------------------------------TGAATGT---CGTATTCAAGTGTCG-CAT--TTT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------TT-----GAGAGCGGAA------------------------------------------------ATTTGAGTTATC----T-----------------------------CAATTAAATTTTT----------------------------------------------------------------------TTCCTCAATCTTCTTTGATG---------------------------------AATA-----------------------------T---------TGC------TATTATTATACCCGATACT------CAAAATGAGTATTGGGGTATATTAGATTTGT-GGTAAAA-GTGGATGTGTGTAACGTCCAGAAGGAATCGTTTCCGACCCTATAAAGTATATATATTCTTGATSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
..............................................................................................................................................................................................................................................TTCAAGTGTCG-CAT--TTT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------TT-----GA..................................................................................................................................................................................................................................................................................................................................................................................................................................2141.0040200002000
................................................................................................................................................................................................................................TGAATGT---CGTATTCAAGTGTC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21190.53100600013000
...................................................................................................................................................................................................................................ATGT---CGTATTCAAGTGTCG-CA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.50100800002000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGT-GGTAAAA-GTGGATGT.......................................................20200.4590090000000
..................................................................................................................................................................................................................................AATGT---CGTATTCAAGTGTCG-C...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.4590900000000
................................................................................................................................................................................................................................................CAAGTGTCG-CAT--TTT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------TT-----GAGA................................................................................................................................................................................................................................................................................................................................................................................................................................2130.3310100000000
.................................................................................................................................................................................................................................GAATGT---CGTATTCAAGTGTCG-............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.3060600000000
.............................................................................................................................................................................................................................................ATTCAAGTGTCG-CAT--TTT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------TT-----G...................................................................................................................................................................................................................................................................................................................................................................................................................................21200.3060400101000
....................................................................................................................................................................................................................................TGT---CGTATTCAAGTGTCG-CAT--.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.2550500000000
................................................................................................................................................................................................................................................CAAGTGTCG-CAT--TTT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------TT-----GAG.................................................................................................................................................................................................................................................................................................................................................................................................................................2040.2510000100000
.................................................................................................................................................................................................................................................AAGTGTCG-CAT--TTT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------TT-----GAG.................................................................................................................................................................................................................................................................................................................................................................................................................................1940.2510000000010
......................................................................................................................................................................................................................................T---CGTATTCAAGTGTCG-CAT--TT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.2550400001000
.................................................................................................................................................................................................................................GAATGT---CGTATTCAAGTGTC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.2040400000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGT-GGTAAAA-GTGGATGTGA.....................................................21200.2040400000000
............................................................................................................................................................................................................................................TATTCAAGTGTCG-CAT--TTT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------TT-----....................................................................................................................................................................................................................................................................................................................................................................................................................................21200.1530300000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGGAATCGTTTCCGACCCTATAAA.................25200.1530000000300
...........................................................................................................................................................................................................................................GTATTCAAGTGTCG-CAT--TTT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------T..........................................................................................................................................................................................................................................................................................................................................................................................................................................21200.1530200001000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGGAATCGTTTCCGACCCTATAAAGT...............28200.1530300000000
..............................................................................................................................................................................................................................................TTCAAGTGTCG-CAT--TTT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------TT-----G...................................................................................................................................................................................................................................................................................................................................................................................................................................20200.1530000003000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGGAATCGTTTCCGACCCTATAA..................25200.1020000200000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAGTATTGGGGTATATTAGATTTGT-G......................................................................27200.1020200000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATCGTTTCCGACCCTATAA..................20200.1020200000000
.............................................................................................................................................................................................................................................ATTCAAGTGTCG-CAT--TTT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------TT-----....................................................................................................................................................................................................................................................................................................................................................................................................................................20200.1020200000000
..................................................................................................................................................................................................................................AATGT---CGTATTCAAGTGTCG-............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.1020100000010
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGT-GGTAAAA-GTGGATG........................................................19200.1020000020000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGTTTCCGACCCTATAAAGTATAT...........25200.1020010000100
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGGAATCGTTTCCGACCCTATAAAGA...............27200.1020200000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGATG---------------------------------AATA-----------------------------T---------TGC------TATTATT.........................................................................................................................21170.0610100000000
....................................................................................................................................................................................................................................TGT---CGTATTCAAGTGTCG-CA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.0510100000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGTATTGGGGTATATTAG..............................................................................19200.0510100000000
..........................................................................................................................................................................................................................................CGTATTCAAGTGTCG-CAT--TTT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------...........................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510000010000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATACCCGATACT------CAAAATGAGT.............................................................................................23200.0510000000010
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTATTATACCCGATACT------CAAAAT.................................................................................................23200.0510100000000
.....................................................................................................................................................................................................................................GT---CGTATTCAAGTGTCG-CAT--T......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510100000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTGTAACGTCCAGAAGGAAT...................................22200.0510100000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGTTTCCGACCCTATAAAGTA..............22200.0510010000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGATTTGT-GGTAAAA-GTG............................................................19200.0510000100000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAATCGTTTCCGACCCTATAAAGTAT.............26200.0510100000000
...................................................................................................................................................................................................................................ATGT---CGTATTCAAGTGTCG-C...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.0510100000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAAA-GTGGATGTGTGTAACGTC.............................................23200.0510100000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGGAATCGTTTCCGACCCTATA...................24200.0510010000000
............................................................................................................................................................................................................................................TATTCAAGTGTCG-CAT--TTT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------T..........................................................................................................................................................................................................................................................................................................................................................................................................................................20200.0510100000000
..........................................................................................................................................................................................................................................CGTATTCAAGTGTCG-CAT--T......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.0510000001000
droPer2
TCT--------CTAAG----------------CCACAA--------------------CTGA-CTA---------------TGGCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTC-----------------------------------------------TTAATGGGGTGTGGTAAAT-----------ACTC-----------------------------------TCTACTT--------GAAG------------------------CTGCTGTTAG----TTAAAAAATATT-----TAATTCTTTTAAGCTATT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGT------ATTTATTATACCCGATACT------CAAAATGAGTATTGGGGTATATTAGATTTGT-GGTAAAA-GTGGATGTGTGTAACGTCCAAAAGGAATCGTTTCCGACCCCATAAAGTATATATATTCTTGATSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.......................................................................................................................................................................................................................................................................................................................................................................................CTACTT--------GAAG------------------------CTGCTGTTA............................................................................................................................................................................................................................................................................................................................................................................................................................................1950.201000001
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTGTAACGTCCAAAAGGAATCGT................................25200.204040000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTGTAACGTCCAAAAGGAATCGTT...............................26200.204040000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCCAAAAGGAATCGTTTCCG...........................21200.153000003
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGGTATATTAGATTTGT-G......................................................................19200.051010000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GT-GGTAAAA-GTGGATGTGTGTAACG...............................................25200.051000001
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTGTAACGTCCAAAAGGAAT...................................22200.051010000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCCAAAAGGAATCGTTTC.............................19200.051000001
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGTAACGTCCAAAAGGAATCGT................................24200.051010000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGTCCAAAAGGAATCGTTTCCG...........................24200.051010000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTGTAACGTCCAAAAGGAATCGTTT..............................27200.051010000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAACGTCCAAAAGGAATCGTTTCCG...........................25200.051010000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCCAAAAGGAATCGTTTCCGACC........................24200.051100000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTCCAAAAGGAATCGTTTCC............................21200.051000001
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGTCCAAAAGGAATCGTTTCC............................23200.051010000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTAACGTCCAAAAGGAATCGT................................23200.051010000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTAACGTCCAAAAGGAATCG.................................21200.051010000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTAACGTCCAAAAGGAATCG.................................22200.051010000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGTGTAACGTCCAAAAGGAATCGA................................26200.051010000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGGAATCGTTTCCGACCCCATA...................24200.051010000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGTGTAACGTCCAAAAGGAAT...................................23200.051010000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGGAATCGTTTCCGACCCCATAAA.................26200.051010000
droWil2
TTG-----ATG--------------TCTATAAGAGCCA--------------------CGAA-ATT---------------TGTCACACACAC----CCAG---------------------------------------------------------------------------------------------------ATGAAGTTTATTTCAAAGGGAAATTGAAGGTGTGTGAATTCAAATGCCA-----------------------------------------------------------------------------TTTCTGTTGGTAT-----------------------------------TAATGTG--------AA-----------------------------------------------------------------------------------------------------CTTTGGT---------------A--TCAGTACAACTTCTACTTTTGCAAGTAATTGTGG--------------------------------------------------------------------------------------------------------------------CTCCTAT---------CAAAT-------------------T---------GGC------CATTTTTA-----------TACCCTTGCA------AAAAGGGTATATTAATTTTGG-TCA--------GAAGTGTGCAACGCATAGAAGGAAGCATTTCCGACCATATAAAGTATATATATTCTTGATSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.....................................................................................................................................................................................................................CAAAGGGAAATTGAAGGTGTGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100010
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTTTGG-TCA--------GAAGTGTGCAACGCA.............................................26200.15300030
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTTGG-TCA--------GAAGTGTGCA..................................................20200.05100010
droVir3
TTT--------A-----------------GAGAAATAA--------------------CGTA-ATA---------------TGTTGTAAT---T-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AT----------------------------------------------------------------------------------------------------------------------------------------------------------------TTTAAATTTATT-----GAATATCTTTTTTT---------------TTTT----------------------------------------------------------------------------------TTAAAGTGTTA-------------------------------AAGATTT----------------AA-----------------------------------------------------AAGC-------ATAAAAATTTGTTT---------ATACAT---TTTTATAA-----------TACCGTTGCA--------GAGGGTTTTATAATTTTTT-CGT--------GAAATGTGTAACGCATAGAAGGAGACATCTCCGACCCCATAAAGTATATATATTCTTATTSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATGTGTAACGCATAGAAGGAGACA.................................262016.103220000000000000000000000000911670000000006400000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATGTGTAACGCATAGAAGGAG....................................23204.05810000000000000000000000008100000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATGTGTAACGCATAGAAGGAGACATC...............................28203.15630000000000000000000000000630000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATGTGTAACGCATAGAAGGAGA...................................24201.20240000000000300000000000050000000000000120000000000000000000000040
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATGTGTAACGCATAGAAGGA.....................................22201.00200000000000000000000000000000000000200000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATGTGTAACGCATAGAAGGAGAC..................................25200.204000000000000000000000000000000000000000000000000000000000000040
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAATGTGTAACGCATAGAAGGAG....................................24200.153000000000000000000000000001020000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTGTAACGCATAGAAGGAGACATC...............................26200.153000000000000000000001000002000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAATGTGTAACGCATAGAAGGAGACA.................................27200.153000000000000300000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATGTGTAACGCATAGAAG.......................................20200.102000000000000000000000000000000200000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAATGTGTAACGCATAGAAGGAGAC..................................26200.102000000000000000000000000000000000000000200000000000000000000000
TTT--------A-----------------GAGAAATAA--------------------CGTA-ATA---------------T....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21130.081000000000000000000000000000000000001000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GT--------GAAATGTGTAACGCATAGAAGGA.....................................25200.051000000000000000000000000000001000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCATAGAAGGAGACATCTCCGA..........................23200.051000000000000000000000000000000000010000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGTGTAACGCATAGAAGGAGACAT................................26200.051000000000000000000000000000000000000100000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAATGTGTAACGCATAGAAGGAGA...................................25200.051000000000000000000000000000010000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTAACGCATAGAAGGAGAC..................................21200.051000000000000000000000000000000000000000000000000000000000000001
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTAACGCATAGAAGGAGACATC...............................24200.051000000000000000000000000010000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAACGCATAGAAGGAGACATCTCCGA..........................27200.051000000000000000000000000000000000010000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAACGCATAGAAGGAGACATCTCCGACC........................28200.051000000000000000000000000000000000000010000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGCATAGAAGGAGACATCTCCGACC........................27200.051000000000000000000000000000000001000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAATGTGTAACGCATAGAAGGA.....................................23200.051000000000000000000000000000010000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATGTGTAACGCATAGAAGGAGAG..................................25200.051000000000000000000000000000010000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATGTGTAACGCATAGAA........................................19200.051000000000000000000000000000010000000000000000000000000000000000
droMoj3
ATA--------TTTAT----------CTAGTACAAGCT--------------------CATA----------------ATATGAAATAT------------------------------------A---------------------------------------------------------------------------------------------------------------------------------TT-GCGGTT-----AGTTTGATATTCATACAAAAATC------CAATT---------------------------------------------------------------------------------------------------------------ATA----------TTCC---ATATGTGATATTATATGTT--CATATAAT-----------------------------AGT-----CAAG----TTAAGGAAA-----------------------------------------------T--------------------------------ACAATTATTTA-------------------------------------------------------------------------------------------AATTGGGATACACCCATTACATA----TATCCCTGAATCCG----------TTCC-------AAGTAGGTATAATGTTTTTAT-AAA--------AATATATGTAACTATCAGAAGGAGATGTGGCAGACCCCACAAAGTATATATATTCTTGATSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAATCCG----------TTCC-------AAGTAGGTA....................................................................................2111.001000010
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACCCCACAAAGTATATATATTCTTG..26200.051100000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCCCACAAAGTATATATATT......21200.051100000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGTATATATATTCTTGAT19200.051100000
droGri2
AAC--------CCGAT----------CTGGCAAAG--------------------T---GCT-CGA-----------GATGTTAA------------------------------------TTATATACGTT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CATGT--------------------------------------------------------------------------------------------------------------ATGTGTCCATGTGTGTATGTGCACGTATGG-----------------GTAAGTA--T---------------------------------------------------------------------------------------------------------------------------------------------------------ATCGTT----C-------------------G---------TTT------GTTTATTATGCCCTCAACA------TGAA--CTGAAAGAGGGTGTTATGATGAAGT-GCA--------AATGTATGTAATAGGCAGAAGGAAGCATATCCGAACCTATAAAGTA----CATTCTAGATSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
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Generated: 05/18/2015 at 01:39 AM