ID:

dan_1322

 Coordinate:

scaffold_13117:2740681-2740831 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-9.0 -8.7 -8.7 -8.6

Flybase annnotation

exon [dana_GLEANR_4547:8]; CDS [Dana\GF21340-cds]; intron [Dana\GF21340-in]

No Repeatable elements found

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
CCCGGCCGTGTAAGAACCCACCAAAGAAAGTTCCTTCTAGCTATATATGCGTGAGTATTTTTAGAGATCTCTATCATCAACCAACCAGCCAAAAAAAAAAACAAACCAACCAACCAAAAGTATAACAATTAAAGTCAATAATCGAAGCGTGCTAAACCAATAAAGTGCCAGAGTACCAATCGAAATTAAATCGAAATCAATATCGAATGTAGTAGTTTCAGACACTCCGAAAATGGATTATACGAGGTTTA
**************************************************.............................................................................((.....((.....((((...(((((....((......))....)))))...)))).........)).....))************************************************** 		Read size # Mismatch Hit Count Total Norm Total M058
embryo
 V039
embryo
 V055
head
............................................................................................AAAAAAAAACAACCCAACCA........................................................................................................................................... 20 1 5 1.20 6 5 1 0
..................................................................................................AAACACTCCAACCAACCAAAA.................................................................................................................................... 21 2 1 1.00 1 1 0 0
...........................................................................................AAAAAAAAAACAAACCAACC............................................................................................................................................ 20 0 1 1.00 1 1 0 0
............................................................................................AAAAAAAAACAAACTAATCAACCAAA..................................................................................................................................... 26 2 1 1.00 1 1 0 0
...........................................................................................AAAAAAAAAACAAACCAACCA........................................................................................................................................... 21 0 1 1.00 1 1 0 0
............................................................................................AAAAAAAAACAAACCAACC............................................................................................................................................ 19 0 1 1.00 1 1 0 0
...........................................................................................AAAAAAAAAACAACCCAACCA........................................................................................................................................... 21 1 4 1.00 4 4 0 0
..............................................................................................AAAAAAACAAACCACCCAAC......................................................................................................................................... 20 1 1 1.00 1 1 0 0
...............................................................................................AAAAAACAAACCAACCCACCA....................................................................................................................................... 21 1 1 1.00 1 1 0 0
..........................................................................................AAAAAAAAAAACAAACCAACC............................................................................................................................................ 21 0 1 1.00 1 1 0 0
.........................................................................................................................................................................................TTTAATCTAAATCAATATCGAG............................................ 22 3 2 0.50 1 0 1 0
..............................................................................................AAAAAAACAACCCAACCCACC........................................................................................................................................ 21 2 2 0.50 1 1 0 0
............................................................................................AAAAAAAAACACTCCACCCAACCAA...................................................................................................................................... 25 3 2 0.50 1 1 0 0
............................................................................................AAAAAACAACAAACCAACCA........................................................................................................................................... 20 1 2 0.50 1 0 1 0
.................................................................................................AAAACAAACCAACCCACCA....................................................................................................................................... 19 1 2 0.50 1 1 0 0
.................................................................................................AAAACAGACCAACCACCCAAAA.................................................................................................................................... 22 2 2 0.50 1 1 0 0
.........................................................................................TAAAAAAAAAAACAAACCAACC............................................................................................................................................ 22 1 2 0.50 1 1 0 0
...............................................................................................AAAAAACAAACCAACCACC......................................................................................................................................... 19 1 2 0.50 1 1 0 0
...............................................................................................AAAAAACAACCCAACCAACC........................................................................................................................................ 20 1 2 0.50 1 1 0 0
.............................................................................................AAAAAAAACAACCCAACCA........................................................................................................................................... 19 1 6 0.50 3 3 0 0
............................................................................................AAAAAAAAACAAACCAACCC........................................................................................................................................... 20 1 2 0.50 1 1 0 0
...........................................................................................AAAAAAAAAACAACCCAACCACC......................................................................................................................................... 23 2 2 0.50 1 1 0 0
............................................................................................AAAAAAAAACAACCCAACCACCC........................................................................................................................................ 23 2 2 0.50 1 1 0 0
..........................................................................................AAAAAAAGAACCAAACAAACCAACCA....................................................................................................................................... 26 3 2 0.50 1 1 0 0
.............................................................................................................................................TTGAAGCGTGCTAAACTAAGA......................................................................................... 21 3 2 0.50 1 0 0 1
................................................................................................AAAAAGAAACCAACCAACCCAGA.................................................................................................................................... 23 3 2 0.50 1 1 0 0
..............................................................................................AAAAAAACAACCCAACCAA.......................................................................................................................................... 19 1 8 0.38 3 3 0 0
...........................................................................................AAAAAAAAAACAACCCAACC............................................................................................................................................ 20 1 8 0.38 3 3 0 0
...............................................................................................AAAGAACAAACCAACCCACC........................................................................................................................................ 20 2 3 0.33 1 1 0 0
............................................................................................AAAGAAAAACAAACCAACCA........................................................................................................................................... 20 1 3 0.33 1 1 0 0
..................................................................................................AAACAAACAAACCAACCAAA..................................................................................................................................... 20 1 3 0.33 1 1 0 0
..............................................................................................AAAAGACCAAACCAACCCACCA....................................................................................................................................... 22 3 3 0.33 1 1 0 0
..............................................................................................AAAAAAACAACCCAACCA........................................................................................................................................... 18 1 10 0.30 3 3 0 0
...........................................................................................AAAAAGAAAACAACCCAACCA........................................................................................................................................... 21 2 8 0.25 2 2 0 0
..............................................................................................AAAAAAAGAAACCAACCAAC......................................................................................................................................... 20 1 4 0.25 1 1 0 0
...........................................................................................AAAAAAAAAACAAACGAACCA........................................................................................................................................... 21 1 4 0.25 1 1 0 0
.....................................................................................................................................GTCAATATTCCAAGCGTG.................................................................................................... 18 2 4 0.25 1 0 0 1
..............................................................................................AAAGAAAAAAACCAACCCACCAAA..................................................................................................................................... 24 3 4 0.25 1 1 0 0
............................................................................................AAAAAAAAACAACCCAACC............................................................................................................................................ 19 1 9 0.22 2 2 0 0
..........................................................................................AAAAAAAAAAACCAACCAACC............................................................................................................................................ 21 1 5 0.20 1 1 0 0
..........................................................................................AAAAAACAAAACAACCCAACCAA.......................................................................................................................................... 23 2 5 0.20 1 1 0 0
............................................................................................AAAAAAATACCAACCAACCACCC........................................................................................................................................ 23 3 5 0.20 1 1 0 0
...............................................................................................AAAAAACAAATCAACCCACCA....................................................................................................................................... 21 2 5 0.20 1 1 0 0
...........................................................................................AAAAATAAAACAACCCAACCTAC......................................................................................................................................... 23 3 5 0.20 1 1 0 0
..............................................................................................AAAAAAAAAAACCAACCAACC........................................................................................................................................ 21 1 5 0.20 1 1 0 0
...........................................................................................GAAAAAACAACAAACCAACCA........................................................................................................................................... 21 2 5 0.20 1 1 0 0
.................................................................................................AAAGCAAACCAACCCACCA....................................................................................................................................... 19 2 5 0.20 1 1 0 0
...............................................................................................AAAAAACAAACCACCCTACCA....................................................................................................................................... 21 2 6 0.17 1 1 0 0
...............................................................................................AAAAAACAAACCAGCAAACCA....................................................................................................................................... 21 2 6 0.17 1 1 0 0
...........................................................................................AAAGAAAAAACAACCCAACCA........................................................................................................................................... 21 2 6 0.17 1 1 0 0
...............................................................................................AAAAAACAACTCAACCAACCA....................................................................................................................................... 21 2 6 0.17 1 0 1 0
..............................................................................................AAAAAAACAAACCAACCACCT........................................................................................................................................ 21 2 6 0.17 1 1 0 0
.............................................................................................AAAAAAAAGAACCTAACCAACCA....................................................................................................................................... 23 3 6 0.17 1 1 0 0
.............................................................................................AAATAAAACAACCCAACCA........................................................................................................................................... 19 2 19 0.16 3 3 0 0
................................................................................................AAAAACAAAACAACCCACCA....................................................................................................................................... 20 2 20 0.15 3 3 0 0
.........................................................................................CAAAAAAAAAGACAAACCACC............................................................................................................................................. 21 2 7 0.14 1 1 0 0
...............................................................................................AAAAAACAAACCTTCCAACC........................................................................................................................................ 20 2 7 0.14 1 1 0 0
...........................................................................................AAAGAAAAGACAAACCAACCAC.......................................................................................................................................... 22 3 7 0.14 1 1 0 0
.......................................................................................GAGAAAAAAAAAAACAACCCAACCA........................................................................................................................................... 25 3 7 0.14 1 1 0 0
........................................................................................CCAAAAAGAAAAAAAAACCAACC............................................................................................................................................ 23 2 7 0.14 1 1 0 0
............................................................................................AAAGAAAAACACACCAACCCACC........................................................................................................................................ 23 3 7 0.14 1 1 0 0
...............................................................................................AGAAAACAATCCAACCCACCAA...................................................................................................................................... 22 3 7 0.14 1 1 0 0
...........AAGAACCCACCCAAGGAA.............................................................................................................................................................................................................................. 18 2 7 0.14 1 1 0 0
...............................................................................................AAAAAACAATCCTACCAAC......................................................................................................................................... 19 2 7 0.14 1 1 0 0
...............................................................................................AAAAAACAACCCAACCCACC........................................................................................................................................ 20 2 7 0.14 1 1 0 0
............................................................................................AAAAAAAAACAACCCTACCA........................................................................................................................................... 20 2 15 0.13 2 2 0 0
............................................................................................AAAAAAGAACAACCCAACCAA.......................................................................................................................................... 21 2 8 0.13 1 1 0 0
..............................................................................................AAAAAAACAAACCCACCCACC........................................................................................................................................ 21 2 8 0.13 1 1 0 0
...........................................................................................AAAAGAAAAACAACCCAACCA........................................................................................................................................... 21 2 8 0.13 1 1 0 0
.............................................................................................AAAAAAAATAAACCAACCA........................................................................................................................................... 19 1 8 0.13 1 1 0 0
............................................................................................AAAAAAACACAAACCAACCA........................................................................................................................................... 20 1 8 0.13 1 1 0 0
.............................................................................................GAAAAAAAAAAACCAACCAACC........................................................................................................................................ 22 2 9 0.11 1 1 0 0
................................................................................................AAAAACAAACCAACCAACA........................................................................................................................................ 19 1 9 0.11 1 1 0 0
..........................................................................................AAAACAAAGAACAAACCAACC............................................................................................................................................ 21 2 9 0.11 1 1 0 0
.........................................................................................GAAAAAAAAAAACCAACCAACC............................................................................................................................................ 22 2 9 0.11 1 1 0 0
...............................................................................................AAAAAAAAAACCAACCAACC........................................................................................................................................ 20 1 9 0.11 1 1 0 0
...........................................................................................AAAAAAAAAACCAACCAACC............................................................................................................................................ 20 1 9 0.11 1 1 0 0
............................................................................................AAAAAAAAACAAACCACCC............................................................................................................................................ 19 1 9 0.11 1 1 0 0
............................................................................................ATAAAAAACCAAACCAACCAA.......................................................................................................................................... 21 2 9 0.11 1 1 0 0
...............................................................................................ATAAAACAACCCAACCCACCA....................................................................................................................................... 21 3 9 0.11 1 1 0 0
..............................................................................................AAAAAAACAACCCTACCA........................................................................................................................................... 18 2 20 0.10 2 2 0 0
.............................................................................................AAAACAAACAACCCAACCA........................................................................................................................................... 19 2 20 0.10 2 2 0 0
...............................................................................................AAAACACAGACAAACCAACCAAA..................................................................................................................................... 23 3 10 0.10 1 1 0 0
...........................................................................................AATAAAAAAACAAACCAACCT........................................................................................................................................... 21 2 10 0.10 1 1 0 0
............................................................................................AAAACAAAACAACCCAACCA........................................................................................................................................... 20 2 20 0.10 2 2 0 0
.............................................................................................AAAAAAAAGAACCCAATCAACCA....................................................................................................................................... 23 3 10 0.10 1 1 0 0
............................................................................................AAAAAACAACAACCCAACCA........................................................................................................................................... 20 2 20 0.10 2 2 0 0
.................................................................................................AAAACGAACCAACCCACCA....................................................................................................................................... 19 2 11 0.09 1 1 0 0
..................................................................................................AAAGAAACCAACCAACCTA...................................................................................................................................... 19 2 11 0.09 1 1 0 0
.............................................................................................AACAAAAACAAACCAAACAACC........................................................................................................................................ 22 2 11 0.09 1 1 0 0
..........................................................................................AAAAGAAAACACAAACCAACC............................................................................................................................................ 21 2 11 0.09 1 1 0 0
..........................................................................................AAAAGAAAAAACAACCCAACC............................................................................................................................................ 21 2 11 0.09 1 1 0 0
.............................................................................................AAAAAGAACAAACCAACCAC.......................................................................................................................................... 20 2 11 0.09 1 1 0 0
...........................................................................................AAAGAAAAAACAAGCCAACC............................................................................................................................................ 20 2 11 0.09 1 1 0 0
................................................................................................AGAAAGAAACCAACCAACC........................................................................................................................................ 19 2 12 0.08 1 1 0 0
...........................................................................................AAAAACAAAACAACCCAACCA........................................................................................................................................... 21 2 12 0.08 1 1 0 0
.................................................................................................AAAACAACCCAACCAACTA....................................................................................................................................... 19 2 13 0.08 1 1 0 0
.................................................................................................AAAACAAACCAGCCCACCA....................................................................................................................................... 19 2 13 0.08 1 0 1 0
.................................................................................AAACCAGCCAAAAAAAAGAACC.................................................................................................................................................... 22 3 13 0.08 1 1 0 0
................................................................................CTAACCTGCCAAAAAAAAAAA...................................................................................................................................................... 21 2 14 0.07 1 1 0 0
............................................................................................AAAAAAAAACAACCCAACCCA.......................................................................................................................................... 21 2 14 0.07 1 1 0 0
...........................................................................................AAAAAAACAACAAACCCACCA........................................................................................................................................... 21 2 15 0.07 1 1 0 0
..........TAAGAACCCACCAAAAGA............................................................................................................................................................................................................................... 18 2 15 0.07 1 1 0 0
..............................................................................................AAAAAAAAAAACCAACCCACCA....................................................................................................................................... 22 2 15 0.07 1 1 0 0
..........................................................................................AAAAAAAAAAACCAACCCACCA........................................................................................................................................... 22 2 15 0.07 1 1 0 0
.............................................................................................AAAAAAAACCAACCAACCA........................................................................................................................................... 19 1 15 0.07 1 1 0 0
.................................................................................................AAAAAAAACCAACCAACCA....................................................................................................................................... 19 1 15 0.07 1 1 0 0
............................................................................................AAAAAAGAACAACCCAACCA........................................................................................................................................... 20 2 15 0.07 1 1 0 0
.............................................................................................AAAAAAAACAACCCCACCAA.......................................................................................................................................... 20 2 16 0.06 1 1 0 0
................................................................................................AAAAACAAACCAACCAAGTA....................................................................................................................................... 20 2 16 0.06 1 1 0 0
...........................................................................................AAAAAAGAAACAAACCCACC............................................................................................................................................ 20 2 16 0.06 1 1 0 0
............................................................................................AAAAAAAGACAAACCACCCA........................................................................................................................................... 20 2 16 0.06 1 1 0 0
...........................................................................................AAAAAAAACACAAACCAACCT........................................................................................................................................... 21 2 17 0.06 1 1 0 0
..........................................................................................AAAAAAAAAAACAACCCAACGA........................................................................................................................................... 22 2 17 0.06 1 1 0 0
...............................................................................................AAAGAACAACCCAACCCACCA....................................................................................................................................... 21 3 17 0.06 1 1 0 0
.............................................................................................AAAAAAAACAAACACCCCAACCAA...................................................................................................................................... 24 3 17 0.06 1 1 0 0
..........................................................................................AAAAATAAAAACAACCCAACC............................................................................................................................................ 21 2 17 0.06 1 1 0 0
...................................................................................................AACAAAACAACCCACCAAAA.................................................................................................................................... 20 2 18 0.06 1 1 0 0
..........................................................................................AAAACAAAAAACAACCCAACC............................................................................................................................................ 21 2 18 0.06 1 1 0 0
............................................................................................ACAAAAAAACAACCCAACCA........................................................................................................................................... 20 2 18 0.06 1 1 0 0
..............................................................................................AAAAAAACAAACCAACCACCA........................................................................................................................................ 21 2 19 0.05 1 1 0 0
..........................................................................................AAAAAAAAAAATTAACCAACAAACC........................................................................................................................................ 25 3 19 0.05 1 1 0 0
...............................................................................................AAAAAACAAGCTCACCAACCA....................................................................................................................................... 21 3 19 0.05 1 1 0 0
..............................................................................................AAGAAAACAACCCAACCAA.......................................................................................................................................... 19 2 19 0.05 1 1 0 0
.............................................................................................AAAAAAAACAAACAACCCGACCA....................................................................................................................................... 23 3 19 0.05 1 1 0 0
..........................................................................................ATAAAAAAGAACAACCCAACCA........................................................................................................................................... 22 3 19 0.05 1 1 0 0
...........................................................................................AAAGAAAAAAAAAACCAACCCACC........................................................................................................................................ 24 3 19 0.05 1 1 0 0
..............................................................................................AAGAAAACAAACCAACCAC.......................................................................................................................................... 19 2 20 0.05 1 1 0 0
................................................................................CCATCCAGACAAAAAAAAAA....................................................................................................................................................... 20 2 20 0.05 1 1 0 0
...........................................................................................TAAAAAAAAACAAACCCACC............................................................................................................................................ 20 2 20 0.05 1 1 0 0
............................................................................................AAAAAAAAACAAACCCACCG........................................................................................................................................... 20 2 20 0.05 1 1 0 0
.............................................................................................AAAAAAAACAAACCTACCC........................................................................................................................................... 19 2 20 0.05 1 1 0 0
.........................................................................................................................................................................................................................TCAGACACACCGAGAATGC............... 19 3 20 0.05 1 0 0 1
............................................................................................AAAAACAAACAACCCAACCA........................................................................................................................................... 20 2 20 0.05 1 1 0 0
............................................................................................AAAAAAAAACAACCCAACCC........................................................................................................................................... 20 2 20 0.05 1 1 0 0
................................................................................................AAAAACAAACAACCCAACCA....................................................................................................................................... 20 2 20 0.05 1 1 0 0
.............................................................................................AGAAAAGACAAACCAACCAAT......................................................................................................................................... 21 3 20 0.05 1 1 0 0
..........................................................................................AAAAAAAAAAACAAACCACC............................................................................................................................................. 20 1 20 0.05 1 1 0 0
...........................................................................................AAAAAAAAAACAACCCAAC............................................................................................................................................. 19 1 20 0.05 1 1 0 0
.................................................................................................AGAACAAACCAACCCACCAC...................................................................................................................................... 20 3 20 0.05 1 1 0 0
............................................................................................AACAAAAAACAACCCAACCA........................................................................................................................................... 20 2 20 0.05 1 1 0 0
...........................................................................................AAAAAAAAAACAAACCAAAC............................................................................................................................................ 20 1 20 0.05 1 1 0 0
..........................................................................................AAATAAAAAAACAACCCTACCA........................................................................................................................................... 22 3 20 0.05 1 1 0 0
..........................................................................................GAAAAAAACAACAACCCAACCA........................................................................................................................................... 22 3 20 0.05 1 1 0 0
..............................................................................................AAATAAAAAAACCAACCCACCA....................................................................................................................................... 22 3 20 0.05 1 1 0 0
..............................................................................................AAAAAAACAAACCAACCCT.......................................................................................................................................... 19 2 20 0.05 1 1 0 0
............................................................................................AAAAAACAACAATCCTACCAA.......................................................................................................................................... 21 3 20 0.05 1 1 0 0
.............................................................................................AAAAAAAACAACACAACCCACCA....................................................................................................................................... 23 3 20 0.05 1 1 0 0
..........................................................................................AAAAAGAACAACAAACCAAC............................................................................................................................................. 20 2 20 0.05 1 1 0 0
................................................................................TCGACCAGCCAAAAAAAAGAA...................................................................................................................................................... 21 3 20 0.05 1 1 0 0
............................................................................................AAAAAAAAACAACCCGACC............................................................................................................................................ 19 2 20 0.05 1 1 0 0
...........................................................................................AAAAAAAAAACAAACCACC............................................................................................................................................. 19 1 20 0.05 1 1 0 0
..........................................................................................AAATAAAAAAACCAACCCACCA........................................................................................................................................... 22 3 20 0.05 1 1 0 0
.............................................................................................AAAAAAAACAATCCTACCA........................................................................................................................................... 19 2 20 0.05 1 1 0 0
..................................................................................................AAACAAACCAAGGAACCAAAAA................................................................................................................................... 22 3 20 0.05 1 1 0 0
...............................................................................................AAAAAACAAGCGAACCCACCA....................................................................................................................................... 21 3 20 0.05 1 1 0 0
...........................................................................................AAAAAAAAAACGACCCTACCA........................................................................................................................................... 21 3 20 0.05 1 1 0 0
................................................................................................CAAAACAAACAAACCACCCAAAA.................................................................................................................................... 23 3 20 0.05 1 1 0 0
..................................................................................................AAACAAAACAACCCACCAAA..................................................................................................................................... 20 2 20 0.05 1 1 0 0
................................................................................................AACAACAAACCAACCCACCACA..................................................................................................................................... 22 3 20 0.05 1 1 0 0
.............................................................................................AAAAACAACAACCCAACCAA.......................................................................................................................................... 20 2 20 0.05 1 1 0 0
.............................................................................................AAAAAGAACAAACCCACCA........................................................................................................................................... 19 2 20 0.05 1 1 0 0
.............................................................................................AAAAGAAACAACCCAACCA........................................................................................................................................... 19 2 20 0.05 1 0 1 0
...............................................................................................AAAAAACAACCCAACCAAG......................................................................................................................................... 19 2 20 0.05 1 1 0 0
............................................................................................AAAAAAAAACCAACCAACCAC.......................................................................................................................................... 21 2 20 0.05 1 1 0 0
..........................................................................................AAAAAAACAAACAAACCACC............................................................................................................................................. 20 2 20 0.05 1 1 0 0
............................................................................................AAAAAAAAACAAACCACC............................................................................................................................................. 18 1 20 0.05 1 1 0 0
................................................................................................AAAAAAAAACCAACCAACCAC...................................................................................................................................... 21 2 20 0.05 1 1 0 0
.............................................................................................AAAAAAAACAAACCATCCCA.......................................................................................................................................... 20 2 20 0.05 1 1 0 0
...................................................................................ACCAGCCAAAAAAAAGAACCC................................................................................................................................................... 21 3 20 0.05 1 1 0 0

Anti-sense strand reads

GGGCCGGCACATTCTTGGGTGGTTTCTTTCAAGGAAGATCGATATATACGCACTCATAAAAATCTCTAGAGATAGTAGTTGGTTGGTCGGTTTTTTTTTTTGTTTGGTTGGTTGGTTTTCATATTGTTAATTTCAGTTATTAGCTTCGCACGATTTGGTTATTTCACGGTCTCATGGTTAGCTTTAATTTAGCTTTAGTTATAGCTTACATCATCAAAGTCTGTGAGGCTTTTACCTAATATGCTCCAAAT
**************************************************.............................................................................((.....((.....((((...(((((....((......))....)))))...)))).........)).....))************************************************** 		Read size # Mismatch Hit Count Total Norm Total V039
embryo
 V055
head
.......................................................................................................................................................................................................TTTATCTTACATCATCAAAGTCT............................. 23 2 1 1.00 1 1 0
...................................................................................................TTGTTTGGTTGGTGGGTCTGC................................................................................................................................... 21 3 16 0.06 1 0 1
.....................................................................................................GTTTTGTTGGTTGGTATACA.................................................................................................................................. 20 3 20 0.05 1 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droAna3 scaffold_13117:2740631-2740881 + dan_1322 CCCGGCCGTGTAAGAACCCACCAAAGAAAGTTCCTTCTAGCTATATATGCGTGAGTATT--TTTAGAGATCTCTATCATCAA---------C------CAACCAGCCAAAA---------------------AAAAAAACAAACCAACCA-------------------------------------ACCAA----------------------------------AAGTATAACAATTAAAGTC-AA--------------------------------------------TAATCGAAGCGTGCTAAACCAATAAAGTGCCAGAGTACC------------------------AATCGAAATTAAATCGAAATCAATATCGAA---------------TGTA-------GTAGTTT-CAGACACTCCGAAAATG-GATTAT--------------ACGAGGTTTA
droBip1 scf7180000396696:389288-389548 - CCCGGCCGTGTAAGAACCCACCAAAGAAAGTTCCTTCTAGCTATATATGCGTGAGTATT--TTTAGAGATCT--ATCAACCA-----------------AACCAGCCAAAC---------------------AAAA---------AAAAAACCAAA--------------CCAAACCAAA----CCAA----------------------CCAATC-----AAAAAAAATATAACAATTAAAGTC-AA--------------------------------------------TAATCGAAACGTGCTAAAGAAATAAAGTGCCAGAGTACC------------------------AA------------TCG-AATGATAA---ATACAAAAACCTACA-TACA-------GTAGTTT-CAGACACTCCAAAAAGG-AATTAT--------------ACGA-GTTTA
droKik1 scf7180000302544:981597-981870 + CCCGGCCGTGTAAGAACCCACCAAAGAAAGTTCCTTCTAGCTATATATGCGTGAGTATT--TTTAGAGATCT--ATCAACAA---------C------CAATCAACCTAAC---------------------AACC---------AACCAATCAATCAA--TCTGCCA-ATCAATCT--A----CCAACCAACAACTT------------------------------------------TTACT-GATAAAAGTTTATGAAAAAAGAAACAATTAACAAACAAAA---AATGAACT----------------GAAAAGTGCCCAAGAACTAGTGAAG--------------CA-GG--------AGA----------GACTAGA-----------TCT---------------GTTT-------------TGTGG-GGAAATCGAAAATAAGAAGCAGGATATATA
droFic1 scf7180000454045:404521-404731 + CCCGGCCGTGTAAGAACCCACCAAAGAAAGTTCCTTCTAGCTATATATGCGTGAGTATT--TTTAGAGATCT--ATCAACAA---------C------CAATCAACCAACA--------A------------AACC---------AACCAACCAAAAAA--CAA--------AAACCAAA----CCAACCAAC----AAGAATAA--ATACCAATA-----TAAAAAAAGATAATAACTAAAATC-AA--------------------------------------------G--------------------AAAGAGTGCCTAAGAACC------------------------AAC-----TAAGAAC----A-----------------------------------------------------TGGAATG--------------------------------
droEle1 scf7180000491272:137255-137488 - CCCGGCCGTGTAAGAACCCACCAAAGAAAGTTCCTTCTAGCTATATATGCGTGAGTATT--CTTAGAGATCT--ATCAACAA---------C------CAATCAACCAACC---------------------AACC---------AACCAACCAACCAAAACAAACCAAACCAAACCAAACCAACCAACCAAAAAATAAGAACAA--GTACCAATC-----AA---AAAGAAAATAACTAAA-TC-GA-----------------------------------------------------------------AAAGAGTGCCTCAAAACA------------------------ATC-----TAAGAACCAAAATGGTATCAGA-----------TCG-A------------------------------------------------------------------
droRho1 scf7180000779588:335520-335715 + CCCGGCCGTGTAAGAACCCACCAAAGAAAGTTCCTTCTAGCTATATATGCGTGAGTATT--TTTAGAGATCT--ATCAACAA---------C------CAATCAACCAACC---------------------AA----------------------------------------ACCAA--------ACCAACAACTAAGAACAA--ATACCAATC-----AA---AACTATAATAACTTAAATC-GA-----------------------------------------------------------------AAAGAGTGCCTAAGAAC----------------------------------------CGAAATGGTATCAGA-----------TCG-ACTT-------GTAGTTT-T-----------------------------------------------
droBia1 scf7180000301345:204376-204603 - CCCGGCCGTGTAAGAACCCACCAAAGAAAGTTCCTTCTAGCTATATATGCGTGAGTATT--TTTAGAGATCT--ATCAACAA---------C------CAATCAACCAAAC---------------------AACT---------TACCAA-----------------------ACCAAA----CCAACCAACAACTAAGAACGA--TTACCAATC-----AA-AAAACGATAATAACCTAAATC-GA-----------------------------------------------------------------AATGAGTGCCTAAGAACC------------------------AAC-----TAACAATCGAAATGATATCAGA-----------TCGAAATA-------G---TAT-TAGA---ACCGAA-----------------------------------
droTak1 scf7180000415281:415882-416106 + CCCGGCCGTGTAAGAACCCACCAAAGAAAGTTCCTTCTAGCTATATATGCGTGAGTATT--TTTAGAGATCT--ATCAACAA---------C------CAATCAACCAACC---------------------AAAC---------AACTAACCAAA--------------CCAAACCAAA----CCAACCAACAACTAAGAACAAAAATACGTATG-----AA-AAAAAGATAATAACTAAAATTCAA-----------------------------------------------------------------AAAGAGTGCCCAA-------------------------------------------TGAAAATGATATCAGA-----------TCGAAATA-------GTAGTTTATCGGG-------------------------------------------
droEug1 scf7180000409182:239899-240151 + CCCGGCCGTGTAAGAACCCACCAAAGAAAGTTCCTTCTAGCTATATATGCGTGAGTATT--TTTAGAGATCT--ATCAACAA---------AAC----CAATCAACCAAAA--------AAAAAAAAACAACAACC---------AACCAAC-------------------------------------------CTAAGAACAA--ATGCCAATCAAACCG----AAAGATAATAACTTAAAAC-GATTAAAGC--AAG--------------------AAAAAAGAAAAAG--------------------AAAGAGTGCCTAA-------------------------------C-----TAAGAGTCCAAATGATATCAGA-----------TTG-AATAGAGGGTAG---T---------ATTT---TTGG-GGAAAA------------------------
dm3 chrX:5290584-5290849 + CCCGGCCGTGTAAGAACCCACCAAAGAAAGTTCCTTCTAGCTATATATGCGTGAGTATT--TTTAGAGATCT--ATCAACAA---------A------CAATCAACCAAAC---------------------AACC---------AACCAACCAA--------------------CC-----AACCAACCAACAACTAAGAACAA--ATACCAATC-----GA---AAAGATAATGACTAAA-AC-AA-----------A--------------------AAAAAAAACAAAA--------------------AAAGAGTGCCTAAGAACAACTAAAG--------------CA-AAC-----TTAAAGCCAAATTGATATCAGA-----------TCGGTATA-------GAAGTTT-TCGGGTCTTTGGAATGG-GGAAAT------------------------
droSim2 x:4936927-4937165 + dsi_19477 CCCGGCCGTGTAAGAACCCACCAAAGAAAGTTCCTTCTAGCTATATATGCGTGAGTATT--TTTAGAGATCT--ATCAACAA---------A------CAATCAACCAAAC---------------------AACC---------AACCA-------------------------------------ACCAACAACTAAGAACAA--ATACCAATC-----GA---AAAGATAATAACTAAA-AG-AA-----------------------------------------------------------------AAAGAGTGCCTAAGAACAACTAAAC--------------CC-AAC-----TTAAAGCCAAAATGATATCAGA-----------TCG-TGTA-------GAAGTTT-TCGGGTCTTTGGAATGG-GGAAAT------------------------
droSec2 scaffold_4:1464202-1464440 - CCCGGCCGTGTAAGAACCCACCAAAGAAAGTTCCTTCTAGCTATATATGCGTGAGTATT--TTTAGAGATCT--ATCAACAA---------A------CAATCAACCAAAC---------------------AACC---------AACCA-------------------------------------ACCAACAACTAAGAACAA--ATACCAATC-----GA---AAAGATAATAACTAAA-AG-AA-----------------------------------------------------------------AAAGAGTGCCTAATAACAACTAAAC--------------CC-AAC-----TTAAAGCCAAAATGATATCAGA-----------TCG-TGTA-------GAAGTTT-TCGGGTCTTTGGAATGG-GGAAAT------------------------
droYak3 X:3178938-3179186 - CCCGGCCGTGTAAGAACCCACCAAAGAAAGTTCCTTCTAGCTATATATGCGTGAGTATT--TTTAGAGATCT--ATCAACAA---------A------CAATCAACCAACC---------------------AACC---------AACCAACCAAACAA--CCA----------ACC-----AACCAACCAACAACTAAGAACAA--ATACCAATC-----GA----AAGATAATAACTAAA-A---------------------------------------------------------------------GAAGAGTGCCTAAGAAC---TAAAG--------------CAAAAC-----TTAAAGCCTAAATGATATCAGA-----------TCG-TATA-------GAAGTTT-TCGGGTCTTTGGATTGG-GG----------------------------
droEre2 scaffold_4690:2644750-2644993 + CCCGGCCGTGTAAGAACCCACCAAAGAAAGTTCCTTCTAGCTATATATGCGTGAGTATT--TTTAGAGATCT--ATCAACAA---------T------CAATCAACCAACC---------------------AACC---------AACCAACCAAA-----------------------------CAACCAAGAACTAAGAACAA--ATACCAATC-----GA----AAGATAATAACTAAA-T---------------------------------------------------------------------GAAGAGTGCCTAAGAACAACTAAAT--------------CA-AAC-----TTAAAGCCTGAATGATATCAGA-----------TCG-TATA-------GAAGTTT-TCGGGTCTTTGGAATGGGGGAAAT------------------------
droWil2 scf2_1100000004909:8996485-8996685 + CCCGGCCGTGTAAGAACCCACCAAAGAAAGTTCCTTCTAGCTATATATGCGTGAGTATTTTTTTAGAGATCTAAATC--CAAAATCCAAAATATCACTAGAACAAC-----------------------------A---------A----------------------------------------------AAAAAAAAAAAAA--GTAAAAATA------A---AAACCTAAAACCAAAA-AC-AA-----------------------------------------------------------------ACAAACAACCAAAGAACAATCAAAATAACTGCGTACTAGCC-AAC-----AACATGCC------------------------------------------------------------------------------------------------
droVir3 scaffold_12932:275466-275615 - CCCGGCCGTGTAAGAACCCACCAAAGAAAGTTCCTTCTAGCTATATATGCGTGAGTATT--TTTAGAGATCT--ATCAACA--------------------TCAACTAACT---------------------GTCA---------GAACCACCAAA------------------------------------AAGTTACGAA--A--ATCCCCA--------A---AAAAGAAATAACAAAA-AA---------------------------------------AA-----------------------------------------AACAAATAA-----------------------------------------------------------------------------------------------------------------------------------
droMoj3 scaffold_6308:293880-294009 + CCCGGCCGTGTAAGAACCCACCAAAGAAAGTTCCTTCTAGCTATATATGCGTGAGTATT--TTTAGAGATCT--ATCAACAA---------TAT----CA-ACAACTAACTGTCAGA----------------------------A-ACCAC-----------------------------------------------CAACAA--ATATCAATC-----A------ATATAACAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droGri2 scaffold_14853:2504640-2504779 + CCCGGCCGTGTAAGAACCCACCAAAGAAAGTTCCTTCTAGCTATATATGCGTGAGTATT--TTTAGAGATCT--ATCAACAA---------A------CA-TCAACTAACTGTCAGAAC-------------CACA---------AATAA-------------------------------------AATAAAAACCAAAAAAAAAAATCCAAAT-----------------------------------------------------------------------------------------------------------------------------------------------------AAAA---------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droAna3
CCCGGCCGTGTAAGAACCCACCAAAGAAAGTTCCTTCTAGCTATATATGCGTGAGTATT--TTTAGAGATCTCTATCATCAA---------C------CAACCAGCCAAAA---------------------AAAAAAACAAACCAACCA-------------------------------------ACCAA----------------------------------AAGTATAACAATTAAAGTC-AA--------------------------------------------TAATCGAAGCGTGCTAAACCAATAAAGTGCCAGAGTACC------------------------AATCGAAATTAAATCGAAATCAATATCGAA---------------TGTA-------GTAGTTT-CAGACACTCCGAAAATG-GATTAT--------------ACGAGGTTTASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
............................................................................................................AAA---------------------AAAAAAACAAACCAACC..............................................................................................................................................................................................................................................................................................................................2011.001010000
............................................................................................................AAA---------------------AAAAAAACAAACCAACCA-------------------------------------........................................................................................................................................................................................................................................................................................2111.001010000
.............................................................................................................AA---------------------AAAAAAACAAACCAACC..............................................................................................................................................................................................................................................................................................................................1911.001010000
...........................................................................................................AAAA---------------------AAAAAAACAAACCAACC..............................................................................................................................................................................................................................................................................................................................2111.001010000
.............................................................................................................AA---------------------AAAAAAACAAACCAACCC-------------------------------------........................................................................................................................................................................................................................................................................................2020.501010000
......................................................................................................................................AAAAACAAACCAACCA-------------------------------------ACA.....................................................................................................................................................................................................................................................................................1990.111010000
....................................................................................................................................AAAAAAACAAACCAACCC-------------------------------------T.......................................................................................................................................................................................................................................................................................19200.051010000
droBip1
CCCGGCCGTGTAAGAACCCACCAAAGAAAGTTCCTTCTAGCTATATATGCGTGAGTATT--TTTAGAGATCT--ATCAACCA-----------------AACCAGCCAAAC---------------------AAAA---------AAAAAACCAAA--------------CCAAACCAAA----CCAA----------------------CCAATC-----AAAAAAAATATAACAATTAAAGTC-AA--------------------------------------------TAATCGAAACGTGCTAAAGAAATAAAGTGCCAGAGTACC------------------------AA------------TCG-AATGATAA---ATACAAAAACCTACA-TACA-------GTAGTTT-CAGACACTCCAAAAAGG-AATTAT--------------ACGA-GTTTASizeHit CountTotal NormTotal
No Reads
droKik1
CCCGGCCGTGTAAGAACCCACCAAAGAAAGTTCCTTCTAGCTATATATGCGTGAGTATT--TTTAGAGATCT--ATCAACAA---------C------CAATCAACCTAAC---------------------AACC---------AACCAATCAATCAA--TCTGCCA-ATCAATCT--A----CCAACCAACAACTT------------------------------------------TTACT-GATAAAAGTTTATGAAAAAAGAAACAATTAACAAACAAAA---AATGAACT----------------GAAAAGTGCCCAAGAACTAGTGAAG--------------CA-GG--------AGA----------GACTAGA-----------TCT---------------GTTT-------------TGTGG-GGAAATCGAAAATAAGAAGCAGGATATATASizeHit CountTotal NormTotal
No Reads
droFic1
CCCGGCCGTGTAAGAACCCACCAAAGAAAGTTCCTTCTAGCTATATATGCGTGAGTATT--TTTAGAGATCT--ATCAACAA---------C------CAATCAACCAACA--------A------------AACC---------AACCAACCAAAAAA--CAA--------AAACCAAA----CCAACCAAC----AAGAATAA--ATACCAATA-----TAAAAAAAGATAATAACTAAAATC-AA--------------------------------------------G--------------------AAAGAGTGCCTAAGAACC------------------------AAC-----TAAGAAC----A-----------------------------------------------------TGGAATG--------------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
CCCGGCCGTGTAAGAACCCACCAAAGAAAGTTCCTTCTAGCTATATATGCGTGAGTATT--CTTAGAGATCT--ATCAACAA---------C------CAATCAACCAACC---------------------AACC---------AACCAACCAACCAAAACAAACCAAACCAAACCAAACCAACCAACCAAAAAATAAGAACAA--GTACCAATC-----AA---AAAGAAAATAACTAAA-TC-GA-----------------------------------------------------------------AAAGAGTGCCTCAAAACA------------------------ATC-----TAAGAACCAAAATGGTATCAGA-----------TCG-A------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
CCCGGCCGTGTAAGAACCCACCAAAGAAAGTTCCTTCTAGCTATATATGCGTGAGTATT--TTTAGAGATCT--ATCAACAA---------C------CAATCAACCAACC---------------------AA----------------------------------------ACCAA--------ACCAACAACTAAGAACAA--ATACCAATC-----AA---AACTATAATAACTTAAATC-GA-----------------------------------------------------------------AAAGAGTGCCTAAGAAC----------------------------------------CGAAATGGTATCAGA-----------TCG-ACTT-------GTAGTTT-T-----------------------------------------------SizeHit CountTotal NormTotal
No Reads
droBia1
CCCGGCCGTGTAAGAACCCACCAAAGAAAGTTCCTTCTAGCTATATATGCGTGAGTATT--TTTAGAGATCT--ATCAACAA---------C------CAATCAACCAAAC---------------------AACT---------TACCAA-----------------------ACCAAA----CCAACCAACAACTAAGAACGA--TTACCAATC-----AA-AAAACGATAATAACCTAAATC-GA-----------------------------------------------------------------AATGAGTGCCTAAGAACC------------------------AAC-----TAACAATCGAAATGATATCAGA-----------TCGAAATA-------G---TAT-TAGA---ACCGAA-----------------------------------SizeHit CountTotal NormTotal
No Reads
droTak1
CCCGGCCGTGTAAGAACCCACCAAAGAAAGTTCCTTCTAGCTATATATGCGTGAGTATT--TTTAGAGATCT--ATCAACAA---------C------CAATCAACCAACC---------------------AAAC---------AACTAACCAAA--------------CCAAACCAAA----CCAACCAACAACTAAGAACAAAAATACGTATG-----AA-AAAAAGATAATAACTAAAATTCAA-----------------------------------------------------------------AAAGAGTGCCCAA-------------------------------------------TGAAAATGATATCAGA-----------TCGAAATA-------GTAGTTTATCGGG-------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEug1
CCCGGCCGTGTAAGAACCCACCAAAGAAAGTTCCTTCTAGCTATATATGCGTGAGTATT--TTTAGAGATCT--ATCAACAA---------AAC----CAATCAACCAAAA--------AAAAAAAAACAACAACC---------AACCAAC-------------------------------------------CTAAGAACAA--ATGCCAATCAAACCG----AAAGATAATAACTTAAAAC-GATTAAAGC--AAG--------------------AAAAAAGAAAAAG--------------------AAAGAGTGCCTAA-------------------------------C-----TAAGAGTCCAAATGATATCAGA-----------TTG-AATAGAGGGTAG---T---------ATTT---TTGG-GGAAAA------------------------SizeHit CountTotal NormTotal
No Reads
dm3
CCCGGCCGTGTAAGAACCCACCAAAGAAAGTTCCTTCTAGCTATATATGCGTGAGTATT--TTTAGAGATCT--ATCAACAA---------A------CAATCAACCAAAC---------------------AACC---------AACCAACCAA--------------------CC-----AACCAACCAACAACTAAGAACAA--ATACCAATC-----GA---AAAGATAATGACTAAA-AC-AA-----------A--------------------AAAAAAAACAAAA--------------------AAAGAGTGCCTAAGAACAACTAAAG--------------CA-AAC-----TTAAAGCCAAATTGATATCAGA-----------TCGGTATA-------GAAGTTT-TCGGGTCTTTGGAATGG-GGAAAT------------------------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
..........................................................................................................................................................................................................................................................................................................................................................................................TATCAGA-----------TCGGTATA-------GAAGTTT-TCGGG...........................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...................................................................................................................................................................................................................................................................A--------------------AAAAAAAACAAAA--------------------AAAGAG....................................................................................................................................................2011.0010000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................ACCAAAGAAAGTTCCTTC..............................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................A-----------A--------------------AAAAAAAACAAAA--------------------AAAGA.....................................................................................................................................................20150.5380000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................CAAAC---------------------AACC---------AACCAACCAA--------------------CC-----AACCAAC......................................................................................................................................................................................................................................................................................2820.5010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................CCAACCAA--------------------CC-----AACCAACCAACAACT..............................................................................................................................................................................................................................................................................2520.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................AACCAA--------------------CC-----AACCAACCAACAAC...............................................................................................................................................................................................................................................................................2240.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................AC---------------------AACC---------AACCAACCAA--------------------CC-----AACCA........................................................................................................................................................................................................................................................................................2350.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................AC---------------------AACC---------AACCAACCAA--------------------CC-----AACCAACCA....................................................................................................................................................................................................................................................................................2750.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................AC-AA-----------A--------------------AAAAAAAACAAAA--------------------AA........................................................................................................................................................20200.2040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000002000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................AAA-AC-AA-----------A--------------------AAAAAAAACAAAA--------------------AAA.......................................................................................................................................................24100.2020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................CC---------AACCAACCAA--------------------CC-----AACCAACCAACA.................................................................................................................................................................................................................................................................................2670.1410000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................A--------------------AAAAAAAACAAAA--------------------AAAGA.....................................................................................................................................................19160.1320000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................AA-----------A--------------------AAAAAAAACAAAA--------------------AA........................................................................................................................................................18200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................CC---------AACCAACCAA--------------------CC-----AACCAA.......................................................................................................................................................................................................................................................................................20200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................AC-AA-----------A--------------------AAAAAAAACAAAA--------------------..........................................................................................................................................................18200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................CCAACCAA--------------------CC-----AACCAACCAA...................................................................................................................................................................................................................................................................................20200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................CCAACCAA--------------------CC-----AACCAACCAACA.................................................................................................................................................................................................................................................................................22120.0810000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................AA-----------A--------------------AAAAAAAACAAAA--------------------AAAGA.....................................................................................................................................................21120.0810000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................AAAAAAAACAAAA--------------------AAAGA.....................................................................................................................................................18160.0610000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................AA-----------A--------------------AAAAAAAACAAAA--------------------AAAG......................................................................................................................................................20180.0610000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................AAA-AC-AA-----------A--------------------AAAAAAAACAAAA--------------------A.........................................................................................................................................................22190.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................CTATATATGCGTGAGGGA.........................................................................................................................................................................................................................................................................................................................................................................................................................18200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................A-AC-AA-----------A--------------------AAAAAAAACAAAA--------------------A.........................................................................................................................................................20200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................AA-----------A--------------------AAAAAAAACAAAA--------------------AAA.......................................................................................................................................................19200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................ACC---------AACCAACCAA--------------------CC-----AACCAACCAA...................................................................................................................................................................................................................................................................................25200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................ACC---------AACCAACCAA--------------------CC-----AACC.........................................................................................................................................................................................................................................................................................19200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................AACCAACCAA--------------------CC-----AACCAACCA....................................................................................................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................C---------------------AACC---------AACCAACCAA--------------------CC-----AACCAAC......................................................................................................................................................................................................................................................................................24200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................AACC---------AACCAACCAA--------------------CC-----AACCA........................................................................................................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................C---------------------AACC---------AACCAACCAA--------------------CC-----AACCAACC.....................................................................................................................................................................................................................................................................................25200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................CCAACCAA--------------------CC-----AACCAACCA....................................................................................................................................................................................................................................................................................19200.0510000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................AAA-AC-AA-----------A--------------------AAAAAAAACAA................................................................................................................................................................................19200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................ACC---------AACCAACCAA--------------------CC-----AACCAACCAAC..................................................................................................................................................................................................................................................................................26200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................A--------------------AAAAAAAACAAAA--------------------AAAG......................................................................................................................................................18200.0510000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................ACC---------AACCAACCAA--------------------CC-----AACCAACCA....................................................................................................................................................................................................................................................................................24200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................AA-AC-AA-----------A--------------------AAAAAAAACAAAA--------------------A.........................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................ACCAACCAA--------------------CC-----AACCAACCAAC..................................................................................................................................................................................................................................................................................22200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................AA-AC-AA-----------A--------------------AAAAAAAACAAAA--------------------..........................................................................................................................................................20200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
CCCGGCCGTGTAAGAACCCACCAAAGAAAGTTCCTTCTAGCTATATATGCGTGAGTATT--TTTAGAGATCT--ATCAACAA---------A------CAATCAACCAAAC---------------------AACC---------AACCA-------------------------------------ACCAACAACTAAGAACAA--ATACCAATC-----GA---AAAGATAATAACTAAA-AG-AA-----------------------------------------------------------------AAAGAGTGCCTAAGAACAACTAAAC--------------CC-AAC-----TTAAAGCCAAAATGATATCAGA-----------TCG-TGTA-------GAAGTTT-TCGGGTCTTTGGAATGG-GGAAAT------------------------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.............................................................................................................................................................................................................................................................................................................................................................................................................CG-TGTA-------GAAGTTT-TCGGGT..........................................1911.00100000000000100000
droSec2
CCCGGCCGTGTAAGAACCCACCAAAGAAAGTTCCTTCTAGCTATATATGCGTGAGTATT--TTTAGAGATCT--ATCAACAA---------A------CAATCAACCAAAC---------------------AACC---------AACCA-------------------------------------ACCAACAACTAAGAACAA--ATACCAATC-----GA---AAAGATAATAACTAAA-AG-AA-----------------------------------------------------------------AAAGAGTGCCTAATAACAACTAAAC--------------CC-AAC-----TTAAAGCCAAAATGATATCAGA-----------TCG-TGTA-------GAAGTTT-TCGGGTCTTTGGAATGG-GGAAAT------------------------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
No Reads
droYak3
CCCGGCCGTGTAAGAACCCACCAAAGAAAGTTCCTTCTAGCTATATATGCGTGAGTATT--TTTAGAGATCT--ATCAACAA---------A------CAATCAACCAACC---------------------AACC---------AACCAACCAAACAA--CCA----------ACC-----AACCAACCAACAACTAAGAACAA--ATACCAATC-----GA----AAGATAATAACTAAA-A---------------------------------------------------------------------GAAGAGTGCCTAAGAAC---TAAAG--------------CAAAAC-----TTAAAGCCTAAATGATATCAGA-----------TCG-TATA-------GAAGTTT-TCGGGTCTTTGGATTGG-GG----------------------------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.........................................................................................................................................................................................................................................................................................................................GAAGAGTGCCTAAGAAC---TA....................................................................................................................................1911.00110000000000
droEre2
CCCGGCCGTGTAAGAACCCACCAAAGAAAGTTCCTTCTAGCTATATATGCGTGAGTATT--TTTAGAGATCT--ATCAACAA---------T------CAATCAACCAACC---------------------AACC---------AACCAACCAAA-----------------------------CAACCAAGAACTAAGAACAA--ATACCAATC-----GA----AAGATAATAACTAAA-T---------------------------------------------------------------------GAAGAGTGCCTAAGAACAACTAAAT--------------CA-AAC-----TTAAAGCCTGAATGATATCAGA-----------TCG-TATA-------GAAGTTT-TCGGGTCTTTGGAATGGGGGAAAT------------------------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
...................................................................................................AATCAACCAACC---------------------AACC---------AACCAACCAAA-----------------------------C.........................................................................................................................................................................................................................................................................................2820.5010100000
droWil2
CCCGGCCGTGTAAGAACCCACCAAAGAAAGTTCCTTCTAGCTATATATGCGTGAGTATTTTTTTAGAGATCTAAATC--CAAAATCCAAAATATCACTAGAACAAC-----------------------------A---------A----------------------------------------------AAAAAAAAAAAAA--GTAAAAATA------A---AAACCTAAAACCAAAA-AC-AA-----------------------------------------------------------------ACAAACAACCAAAGAACAATCAAAATAACTGCGTACTAGCC-AAC-----AACATGCC------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
No Reads
droVir3
CCCGGCCGTGTAAGAACCCACCAAAGAAAGTTCCTTCTAGCTATATATGCGTGAGTATT--TTTAGAGATCT--ATCAACA--------------------TCAACTAACT---------------------GTCA---------GAACCACCAAA------------------------------------AAGTTACGAA--A--ATCCCCA--------A---AAAAGAAATAACAAAA-AA---------------------------------------AA-----------------------------------------AACAAATAA-----------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
No Reads
droMoj3
CCCGGCCGTGTAAGAACCCACCAAAGAAAGTTCCTTCTAGCTATATATGCGTGAGTATT--TTTAGAGATCT--ATCAACAA---------TAT----CA-ACAACTAACTGTCAGA----------------------------A-ACCAC-----------------------------------------------CAACAA--ATATCAATC-----A------ATATAACAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads
droGri2
CCCGGCCGTGTAAGAACCCACCAAAGAAAGTTCCTTCTAGCTATATATGCGTGAGTATT--TTTAGAGATCT--ATCAACAA---------A------CA-TCAACTAACTGTCAGAAC-------------CACA---------AATAA-------------------------------------AATAAAAACCAAAAAAAAAAATCCAAAT-----------------------------------------------------------------------------------------------------------------------------------------------------AAAA---------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/18/2015 at 01:17 AM