ID:

dan_130

 Coordinate:

scaffold_13117:4815211-4815272 -

 Confidence:

Known Ortholog

 Class:

Canonical miRNA

 Genomic Locale:

3pUTR

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-26.2 -26.0 -25.9

Flybase annnotation

utr3 [utr3_minus_9616]

No Repeatable elements found

Sense Strand Reads

TATTTAAAAAGTGATAAGAAATGTCCTAGGAAGTAATTTGTATGTCAGCCTCTCATTTGGCCTGCCTAGCTGACTTTAAATTAATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTGATTGCGATTCAACTTGCAGAATATGTAAAGGACTTAGTGTTTTT

***********************************.....(((((.(((((.((((..(((..((.((((..................)))))).)))..)))).))))).)))))...........*********************************** 		Read size # Mismatch Hit Count Total Norm Total V106

head

 V105

male body		 V055

head

 M044

female body

 V039

embryo

 M058

embryo
..........................................................................................TAGCTGCCTTGTGAAGGGCTT................................................... 21 0 1 28659.00 28659 14093 10045 3458 952 79 32
..........................................................................................TAGCTGCCTTGTGAAGGGCTTA.................................................. 22 0 1 1822.00 1822 492 501 527 283 5 14
..........................................................................................TATCTGCCTTGTGAAGGGCTT................................................... 21 1 1 563.00 563 469 89 5 0 0 0
..........................................................................................TAGCTGCCTTGTGAAGGGCT.................................................... 20 0 1 246.00 246 16 3 126 100 0 1
..........................................................................................TAGCTGCCTTGTGAAGGGCTTT.................................................. 22 1 1 238.00 238 53 76 52 57 0 0
..........................................................................................TAGCTGCCTTGTGAAGGGATT................................................... 21 1 1 193.00 193 131 48 14 0 0 0
..........................................................................................TAGCTGCCTTGTGAAGGGCTA................................................... 21 1 1 182.00 182 90 90 1 1 0 0
..........................................................................................TAGCTGCCTTGTGAAGGTCTT................................................... 21 1 1 164.00 164 102 52 9 0 1 0
..........................................................................................TAGCTTCCTTGTGAAGGGCTT................................................... 21 1 1 162.00 162 118 43 1 0 0 0
..........................................................................................TAGATGCCTTGTGAAGGGCTT................................................... 21 1 1 125.00 125 72 44 9 0 0 0
..........................................................................................TAGCTGCCTTGTGAATGGCTT................................................... 21 1 1 121.00 121 75 36 9 1 0 0
..........................................................................................TAGCTGCCTTGTGAAGGGCTTAG................................................. 23 1 1 120.00 120 50 31 34 5 0 0
...........................................................................................AGCTGCCTTGTGAAGGGCTT................................................... 20 0 1 96.00 96 11 6 7 72 0 0
..........................................................................................TAGCTGCCTTGTGAAGGGCTC................................................... 21 1 1 96.00 96 38 52 5 0 0 1
..........................................................................................TAGCTGCCTTGCGAAGGGCTT................................................... 21 1 1 94.00 94 30 34 27 3 0 0
..........................................................................................TAGCTGCCTTGTGAAGGGCTG................................................... 21 1 1 82.00 82 18 62 2 0 0 0
..........................................................................................TAACTGCCTTGTGAAGGGCTT................................................... 21 1 1 81.00 81 42 13 25 0 1 0
..........................................................................................TACCTGCCTTGTGAAGGGCTT................................................... 21 1 1 79.00 79 33 33 13 0 0 0
..........................................................................................TAGCTGCCTTGAGAAGGGCTT................................................... 21 1 1 78.00 78 6 64 8 0 0 0
..........................................................................................TAGCTGACTTGTGAAGGGCTT................................................... 21 1 1 74.00 74 45 18 11 0 0 0
..........................................................................................TAGCTGCCTTGTGAAGTGCTT................................................... 21 1 1 70.00 70 42 12 15 1 0 0
..........................................................................................TAGCTGCCTTGTTAAGGGCTT................................................... 21 1 1 69.00 69 34 28 7 0 0 0
..........................................................................................TAGCTGCCTTGTGAAGGGCTTAA................................................. 23 1 1 66.00 66 11 7 18 30 0 0
..........................................................................................TAGCTGCATTGTGAAGGGCTT................................................... 21 1 1 65.00 65 43 7 15 0 0 0
..........................................................................................TAGCTGCCTTGTGAAGGGCTTAT................................................. 23 1 1 62.00 62 10 12 17 23 0 0
..........................................................................................TAGCTGCCTTGTCAAGGGCTT................................................... 21 1 1 60.00 60 9 47 4 0 0 0
..........................................................................................TAGCTGCCTTGTGAGGGGCTT................................................... 21 1 1 50.00 50 21 11 17 1 0 0
..........................................................................................TAGCTGCCTTGTGAACGGCTT................................................... 21 1 1 48.00 48 6 31 11 0 0 0
..........................................................................................TAGCTGCCTTATGAAGGGCTT................................................... 21 1 1 48.00 48 5 38 5 0 0 0
..........................................................................................TAGCTGCCTTGTAAAGGGCTT................................................... 21 1 1 48.00 48 9 36 3 0 0 0
..........................................................................................TAGCTGCCTTGTGAAGGGCTTG.................................................. 22 1 1 45.00 45 15 9 18 3 0 0
..........................................................................................TAGCTGCCCTGTGAAGGGCTT................................................... 21 1 1 42.00 42 20 5 6 11 0 0
..........................................................................................TAGCTGCCTTGGGAAGGGCTT................................................... 21 1 1 42.00 42 3 20 19 0 0 0
..........................................................................................TAGCTGCCTTGTGGAGGGCTT................................................... 21 1 1 39.00 39 15 12 11 0 1 0
..........................................................................................TAGCTGCCTTGTGAAGGG...................................................... 18 0 1 37.00 37 23 2 5 6 0 1
..........................................................................................TAGCTGCCTTGTGAAAGGCTT................................................... 21 1 1 37.00 37 11 20 5 1 0 0
..........................................................................................TAGCTGCCTTTTGAAGGGCTT................................................... 21 1 1 37.00 37 19 15 2 1 0 0
..........................................................................................TAGCTGCCTCGTGAAGGGCTT................................................... 21 1 1 37.00 37 23 8 6 0 0 0
..........................................................................................TAGCTGCCGTGTGAAGGGCTT................................................... 21 1 1 37.00 37 1 2 2 32 0 0
..........................................................................................TAGCTGCCTTGTGAAGCGCTT................................................... 21 1 1 36.00 36 7 5 24 0 0 0
..........................................................................................TAGCTGCCTTGTGAAGGGTTT................................................... 21 1 1 34.00 34 16 11 5 1 1 0
..........................................................................................TAGCTGCCTTCTGAAGGGCTT................................................... 21 1 1 34.00 34 5 24 5 0 0 0
..........................................................................................TAGCCGCCTTGTGAAGGGCTT................................................... 21 1 1 33.00 33 17 9 6 1 0 0
..........................................................................................CAGCTGCCTTGTGAAGGGCTT................................................... 21 1 1 32.00 32 16 9 6 1 0 0
..........................................................................................TAGCTGCCTTGTGAAGGGCTTTT................................................. 23 2 1 31.00 31 4 11 9 7 0 0
..........................................................................................TAGCTGCCTTGTGCAGGGCTT................................................... 21 1 1 31.00 31 3 15 13 0 0 0
...........................................................................................AGCTGCCTTGTGAAGGGCTTA.................................................. 21 0 1 31.00 31 0 1 2 28 0 0
..............................................AGCCTCTCATTTGGCCTGCCTAGC............................................................................................ 24 0 1 30.00 30 0 0 0 26 0 4
..........................................................................................TAGCTGCCTTGTGACGGGCTT................................................... 21 1 1 30.00 30 8 1 21 0 0 0
..........................................................................................TAGCTGCCATGTGAAGGGCTT................................................... 21 1 1 29.00 29 2 4 1 22 0 0
..........................................................................................TAGCGGCCTTGTGAAGGGCTT................................................... 21 1 1 25.00 25 0 0 25 0 0 0
..........................................................................................TAGCTGCCTTGTGTAGGGCTT................................................... 21 1 1 24.00 24 5 4 15 0 0 0
..........................................................................................TAGCTGCCTTGTGAAGGCCTT................................................... 21 1 1 23.00 23 6 5 12 0 0 0
..........................................................................................TAGCTGCCTTGTGAAGGGCCT................................................... 21 1 1 22.00 22 8 6 6 1 1 0
..........................................................................................TAGCTGCCTTGTGAAGGGC..................................................... 19 0 1 22.00 22 1 0 14 2 0 5
..........................................................................................TATCTGCCTTGTGAAGGTCTT................................................... 21 2 1 22.00 22 15 7 0 0 0 0
..........................................................................................AAGCTGCCTTGTGAAGGGCTT................................................... 21 1 1 20.00 20 1 8 10 0 0 1
..........................................................................................TAGCTACCTTGTGAAGGGCTT................................................... 21 1 1 19.00 19 13 3 3 0 0 0
..........................................................................................GAGCTGCCTTGTGAAGGGCTT................................................... 21 1 1 18.00 18 2 2 11 3 0 0
..........................................................................................TAGCTGTCTTGTGAAGGGCTT................................................... 21 1 1 18.00 18 10 4 3 1 0 0
..........................................................................................TAGTTGCCTTGTGAAGGGCTT................................................... 21 1 1 18.00 18 10 6 1 0 0 1
..........................................................................................TAGCTGCCGTGTGAAGGGCTTA.................................................. 22 1 1 17.00 17 0 0 0 17 0 0
..........................................................................................TAGCTCCCTTGTGAAGGGCTT................................................... 21 1 1 16.00 16 5 8 3 0 0 0
..........................................................................................TAGCAGCCTTGTGAAGGGCTT................................................... 21 1 1 15.00 15 2 2 11 0 0 0
..........................................................................................TAGCTGCCTTGTGAAGAGCTT................................................... 21 1 1 15.00 15 8 1 6 0 0 0
..........................................................................................TGGCTGCCTTGTGAAGGGCTT................................................... 21 1 1 14.00 14 1 9 3 0 0 1
..........................................................................................TAGCTGGCTTGTGAAGGGCTT................................................... 21 1 1 14.00 14 2 2 10 0 0 0
..........................................................................................TAGATGCCTTGTGAAGGGATT................................................... 21 2 1 14.00 14 8 6 0 0 0 0
..........................................................................................TAGCTGCCTTGTGAAGGACTT................................................... 21 1 1 14.00 14 7 3 4 0 0 0
..........................................................................................TAGCTGCCTTGTGATGGGCTT................................................... 21 1 1 14.00 14 3 5 6 0 0 0
..........................................................................................TATCTGCCTTGTGAAGGGCTTA.................................................. 22 1 1 13.00 13 8 2 3 0 0 0
..........................................................................................TAGGTGCCTTGTGAAGGGCTT................................................... 21 1 1 13.00 13 4 5 4 0 0 0
.........................................................................................CTAGCTGCCTTGTGAAGGGCTT................................................... 22 0 1 12.00 12 1 2 6 3 0 0
..........................................................................................TAGCTGACTTGTGAAGGGATT................................................... 21 2 1 11.00 11 9 2 0 0 0 0
..........................................................................................TATCTGCCTTGTGAATGGCTT................................................... 21 2 1 11.00 11 10 1 0 0 0 0
..........................................................................................TCGCTGCCTTGTGAAGGGCTT................................................... 21 1 1 10.00 10 1 6 2 1 0 0
..........................................................................................TATCTTCCTTGTGAAGGGCTT................................................... 21 2 1 9.00 9 7 2 0 0 0 0
............................................................................................GCTGCCTTGTGAAGGGCTT................................................... 19 0 1 9.00 9 1 3 1 4 0 0
..........................................................................................TAGCTTCCTTGTGAAGGGCTTA.................................................. 22 1 1 9.00 9 6 3 0 0 0 0
..........................................................................................TAGCTGCCTGGTGAAGGGCTT................................................... 21 1 1 9.00 9 1 0 8 0 0 0
..........................................................................................TAGCTGCGTTGTGAAGGGCTT................................................... 21 1 1 8.00 8 2 1 5 0 0 0
..........................................................................................TAGCTGCCTTGCGAAGGGCTTA.................................................. 22 1 1 8.00 8 0 1 7 0 0 0
..........................................................................................TAGCTGCTTTGTGAAGGGCTT................................................... 21 1 1 8.00 8 5 1 2 0 0 0
..........................................................................................TAGCTGCCTTGTGAAGGGCTTAAA................................................ 24 2 1 8.00 8 1 0 6 1 0 0
..........................................................................................TAGCTGCCTTGTGAAGGGATTA.................................................. 22 1 1 7.00 7 5 0 2 0 0 0
..........................................................................................TAGCTGCCTTGTGAAGTGCTTA.................................................. 22 1 1 7.00 7 2 3 0 1 1 0
..........................................................................................TAGATGCCTTGTGAAGGGCTTA.................................................. 22 1 1 7.00 7 3 2 2 0 0 0
...........................................................................................AGCTGCCTTGTGAAGGGCT.................................................... 19 0 1 7.00 7 0 0 0 7 0 0
..........................................................................................TAGATGACTTGTGAAGGGCTT................................................... 21 2 1 7.00 7 3 2 2 0 0 0
..........................................................................................TAGCTTCCTTGTGAAGGTCTT................................................... 21 2 2 6.00 12 9 3 0 0 0 0
..........................................................................................TAGCTGCCCTGTGAAGGGCTTA.................................................. 22 1 1 6.00 6 2 1 0 3 0 0
..........................................................................................TAGCTGCCTTGTGAAGGTCTTA.................................................. 22 1 1 6.00 6 3 1 2 0 0 0
..........................................................................................TATCTGCCTTGTGAAGTGCTT................................................... 21 2 1 6.00 6 6 0 0 0 0 0
..........................................................................................TAGCTGCCTTGTGAAGGGCTTAAG................................................ 24 1 1 6.00 6 3 0 3 0 0 0
..........................................................................................GAGCTGCCTTGTGAAGGGCTTA.................................................. 22 1 1 6.00 6 1 1 4 0 0 0
..........................................................................................TAGCTGCCTTGTGAAGGGCGT................................................... 21 1 1 5.00 5 0 0 5 0 0 0
..........................................................................................TAGCTGCCTTGAGAAGGGCTTA.................................................. 22 1 1 5.00 5 0 4 1 0 0 0
..........................................................................................TAGCTGCCTTGTGAAGGGGTT................................................... 21 1 1 5.00 5 1 0 4 0 0 0
..........................................................................................TAGCTGCATTGTGAAGGGCTTA.................................................. 22 1 1 5.00 5 3 0 2 0 0 0
..........................................................................................TAGCTGCCTTGTGACGGGCTTA.................................................. 22 1 1 5.00 5 0 0 5 0 0 0
..........................................................................................TAGCGGCCTTGGGAAGGGCTT................................................... 21 2 1 5.00 5 0 0 5 0 0 0
..........................................................................................TAGCTGCCATGTGAAGGGCTTA.................................................. 22 1 1 5.00 5 0 1 0 4 0 0
..........................................................................................TAGCTGCCTGGTGAACGGCTT................................................... 21 2 1 5.00 5 0 0 5 0 0 0
..........................................................................................TAGCTGCCTTGTGAAGGCTT.................................................... 20 2 1 5.00 5 2 3 0 0 0 0
..........................................................................................TAGCTGCCTTGTGAAGGGCTTAC................................................. 23 0 1 5.00 5 2 0 2 1 0 0
..........................................................................................TAGCTGCCTTGTGAAGGGCTTC.................................................. 22 1 1 5.00 5 2 1 2 0 0 0
..........................................................................................TAGCTGCCTTGGGAAGGGCTTA.................................................. 22 1 1 5.00 5 0 0 5 0 0 0
..........................................................................................TAGCTGCCTTGTGAAGGGCTTATT................................................ 24 2 1 5.00 5 1 3 0 1 0 0
..........................................................................................TATCTGCCTTGTTAAGGGCTT................................................... 21 2 1 4.00 4 4 0 0 0 0 0
..........................................................................................TACCTGCCTTGTGAAGGGCTTA.................................................. 22 1 1 4.00 4 2 0 0 0 0 2
..........................................................................................TAGCTGCCTTGTGAAGGGCTTTTT................................................ 24 3 1 4.00 4 1 1 0 2 0 0
..........................................................................................TAGCCGCCTTGTGAAGGGCTTA.................................................. 22 1 1 4.00 4 1 0 3 0 0 0
..........................................................................................TAGCTGCCTTGTGAAGGGCTAA.................................................. 22 1 1 4.00 4 1 3 0 0 0 0
..........................................................................................TAGCTGCCTTGTGAACGGCTTA.................................................. 22 1 1 4.00 4 0 2 2 0 0 0
..........................................................................................TAGCTGCCTTATGAAGGGCTTA.................................................. 22 1 1 4.00 4 0 3 1 0 0 0
..........................................................................................TAGCTGCCTTGTGCCGGGCTT................................................... 21 2 1 4.00 4 0 0 4 0 0 0
..........................................................................................TAGCTGCCTTGTGAAGGGCTGA.................................................. 22 1 1 4.00 4 1 1 2 0 0 0
...........................................................................................AGCTGCCTGGTGAAGGGCTT................................................... 20 1 1 4.00 4 0 0 0 4 0 0
..........................................................................................TAGCTGCCTTGTTAAGGTCTT................................................... 21 2 1 4.00 4 3 1 0 0 0 0
..........................................................................................TAGCTGCCTTGTGAAGGGT..................................................... 19 1 1 4.00 4 1 2 0 1 0 0
..........................................................................................AAGCTGCCTTGTGAAGGGCTTA.................................................. 22 1 1 4.00 4 0 0 3 1 0 0
..........................................................................................TGGCTGCCTTGTGAAGGGCTTA.................................................. 22 1 1 4.00 4 0 0 2 0 0 2
..............................................AGCCTCTCATTTGGCCTGCCTAG............................................................................................. 23 0 1 4.00 4 0 0 0 3 0 1
..........................................................................................TAGCTGCCTTGTGAAGGGCTTTG................................................. 23 2 1 4.00 4 3 1 0 0 0 0
..........................................................................................TTGCTGCCTTGTGAAGGGCTT................................................... 21 1 1 4.00 4 1 2 1 0 0 0
..........................................................................................TAGCGGCCTTGTGAAGGGCT.................................................... 20 1 1 4.00 4 0 0 4 0 0 0
..........................................................................................TAGCTGCCTTATGACGGGCTT................................................... 21 2 1 3.00 3 0 3 0 0 0 0
..........................................................................................TAGCTGCCTTGTTAAGGGCTTT.................................................. 22 2 1 3.00 3 1 1 1 0 0 0
..........................................................................................TAGCTGCCGTGTGAAGGGCT.................................................... 20 1 1 3.00 3 0 0 1 2 0 0
..........................................................................................TATCTGCCTTGTGAAGGGCTTAG................................................. 23 2 1 3.00 3 3 0 0 0 0 0
..........................................................................................TAGCTGCCTTGTGCAGGCCTT................................................... 21 2 1 3.00 3 0 3 0 0 0 0
..........................................................................................TAGCTGCCGTATGAAGGGCTT................................................... 21 2 1 3.00 3 0 3 0 0 0 0
..........................................................................................CAGCTGCCTTGTGAAGGGCTTA.................................................. 22 1 1 3.00 3 0 0 3 0 0 0
..........................................................................................TAGCTGACTTGTGAAGGGCTTA.................................................. 22 1 1 3.00 3 0 0 3 0 0 0
..........................................................................................TATCTGCCTTGAGAAGGGCTT................................................... 21 2 1 3.00 3 0 3 0 0 0 0
..........................................................................................TACCTGCCTTGCGTAGGGCTT................................................... 21 3 1 3.00 3 0 0 3 0 0 0
..........................................................................................TAGCTGCCTTGTGAATGGCTTA.................................................. 22 1 1 3.00 3 1 1 1 0 0 0
..........................................................................................TAGCTGCCGTGTGAAGGGCTTT.................................................. 22 2 1 3.00 3 0 0 0 3 0 0
.............................................................................................CTGCCTTGTGAAGGGCTT................................................... 18 0 1 3.00 3 0 1 0 2 0 0
..........................................................................................TAGCTGCCTTGTTAAGGGCTTA.................................................. 22 1 1 3.00 3 0 2 1 0 0 0
..........................................................................................TAACTGCCTTGTGAAGGTCTT................................................... 21 2 1 3.00 3 0 2 1 0 0 0
..........................................................................................TAGCTGCCTTGTGAGGGGCTTA.................................................. 22 1 1 3.00 3 0 0 2 1 0 0
..........................................................................................TAGCTGCTTTGTGAAGGGCTTA.................................................. 22 1 1 3.00 3 0 2 1 0 0 0
..........................................................................................GAGCGGCCTTGTGAAGGGCTT................................................... 21 2 1 3.00 3 0 0 3 0 0 0
..........................................................................................TAGCTGCCGTGTGAAGGGCTTAA................................................. 23 2 1 3.00 3 0 0 0 3 0 0
...........................................................................................AGCTGCCTTGTGAAGGGCTTTT................................................. 22 2 1 3.00 3 0 0 0 3 0 0
..........................................................................................TAGCTGCATTGTGAAGGGCTG................................................... 21 2 1 3.00 3 1 1 1 0 0 0
..........................................................................................TAGCTGCCTTGTGGAGGGCTTA.................................................. 22 1 1 3.00 3 1 1 1 0 0 0
..........................................................................................TAGCTGCCTTGGGAATGGCTTA.................................................. 22 2 1 3.00 3 0 0 3 0 0 0
..........................................................................................TAGCGGCCTTGCGAAGGGCTT................................................... 21 2 1 3.00 3 0 0 3 0 0 0
..........................................................................................TAGCTGCCTTGTGAAAGGCTTA.................................................. 22 1 1 3.00 3 1 2 0 0 0 0
...........................................................................................AGCTGCCTTGTGAAGGGCTTAA................................................. 22 1 1 3.00 3 0 0 0 3 0 0
..........................................................................................TAGCTGCCTTGTGTAGGGCTTA.................................................. 22 1 1 3.00 3 0 0 3 0 0 0
..........................................................................................TACCTGCCTTGCGAAGGGCTT................................................... 21 2 1 3.00 3 0 0 3 0 0 0
..........................................................................................TAGCTGCCTTGTGAAGGGCTCA.................................................. 22 1 1 3.00 3 3 0 0 0 0 0
..........................................................................................TAGCTGCCTTGTGAAGGGATA................................................... 21 2 1 3.00 3 3 0 0 0 0 0
..........................................................................................TAGCTGCCTTGTGAAGCGCTTA.................................................. 22 1 1 3.00 3 1 0 2 0 0 0
..........................................................................................TAGCGGCATTGTGAAGGGCTT................................................... 21 2 1 3.00 3 0 0 3 0 0 0
..........................................................................................TAGCTGCCTTGTGGAGGTCTT................................................... 21 2 1 3.00 3 2 0 1 0 0 0
..........................................................................................TATCTGCCTTCTGAAGGGCTT................................................... 21 2 1 3.00 3 1 1 1 0 0 0
..............................................AGCCTCTCGTTTGGCCTGCCTAGC............................................................................................ 24 1 1 3.00 3 0 0 0 3 0 0
..........................................................................................TAGCTGCCTTTTGACGGGCTT................................................... 21 2 1 3.00 3 0 0 3 0 0 0
..........................................................................................TAACTGCCTTGTGAAGGGATT................................................... 21 2 1 3.00 3 0 0 3 0 0 0
..........................................................................................TAGCTGCCTTGCGAATGGCTT................................................... 21 2 1 3.00 3 0 0 3 0 0 0
..........................................................................................TATCTGCCTTGTGAAGGGCTTT.................................................. 22 2 1 2.00 2 2 0 0 0 0 0
..........................................................................................TAGCTGCCTTGCGCAGGGCTT................................................... 21 2 1 2.00 2 0 0 2 0 0 0
..........................................................................................TAGCTGACTTGTGAGGGGCTT................................................... 21 2 1 2.00 2 0 0 2 0 0 0
..........................................................................................TAGCTGCCTTGTGAAGAGCTTA.................................................. 22 1 1 2.00 2 0 1 1 0 0 0
..........................................................................................TAGCTGCCTTGAGAAGTGCTT................................................... 21 2 1 2.00 2 0 0 2 0 0 0
..........................................................................................TAGCTTCCTTGTGAAGGGCTTAG................................................. 23 2 1 2.00 2 2 0 0 0 0 0
..........................................................................................TAGCTGCCTTGTGAATTGCTT................................................... 21 2 1 2.00 2 0 0 1 0 1 0
..........................................................................................TAGCTGCCTTGCGAAGCGCTT................................................... 21 2 1 2.00 2 0 0 2 0 0 0
..........................................................................................TAGCTGGCTTGTGAAGGGCTTA.................................................. 22 1 1 2.00 2 0 1 1 0 0 0
..........................................................................................TAGCTGCCTTGTGTAGGACTTA.................................................. 22 2 1 2.00 2 0 2 0 0 0 0
..........................................................................................TAGCTGCCTGGTGAAGGGCTTA.................................................. 22 1 1 2.00 2 0 0 2 0 0 0
..........................................................................................TATCTGCCTTGTGAAGGGATT................................................... 21 2 2 2.00 4 4 0 0 0 0 0
..........................................................................................TAGCTGCCTTGCGTAGGGCTT................................................... 21 2 1 2.00 2 0 0 2 0 0 0
..........................................................................................TAGCTGCCTTGTGGAGGCCTT................................................... 21 2 1 2.00 2 0 1 1 0 0 0
..........................................................................................TAGCTGCCTTGTGAAGTGCT.................................................... 20 1 1 2.00 2 0 0 2 0 0 0
..........................................................................................TAGCTGCCTTGTGCAGGTCTT................................................... 21 2 1 2.00 2 1 1 0 0 0 0
..........................................................................................TAGCTGCCTTGTGAATGGCTTT.................................................. 22 2 1 2.00 2 0 1 1 0 0 0
..........................................................................................TAGCAGCCTTGTGAAGGGCTTA.................................................. 22 1 1 2.00 2 0 0 2 0 0 0
..........................................................................................TAGCTGCCTTGAGAAGCGCTT................................................... 21 2 1 2.00 2 0 0 2 0 0 0
..........................................................................................TAGCTGCTTTGTGCAGGGCTT................................................... 21 2 1 2.00 2 0 0 2 0 0 0
..........................................................................................TAGCTGCATTGTGAACGGCTT................................................... 21 2 1 2.00 2 1 1 0 0 0 0
..........................................................................................CATCTGCCTTGTGAAGGGCTT................................................... 21 2 1 2.00 2 1 1 0 0 0 0
..........................................................................................TAGCTGACTTGTGAAGGGCTA................................................... 21 2 1 2.00 2 0 2 0 0 0 0
..........................................................................................TAGCTGCCGTGTGAAGCGCTT................................................... 21 2 1 2.00 2 0 0 2 0 0 0
..........................................................................................TAGCGGCCTTGTGGAGGGCTT................................................... 21 2 1 2.00 2 0 0 2 0 0 0
..........................................................................................TAGCGGCCTTGGGAAGGGCTTA.................................................. 22 2 1 2.00 2 0 0 2 0 0 0
..........................................................................................TATCTGCCTTGTGAAGAGCTT................................................... 21 2 1 2.00 2 1 1 0 0 0 0
..........................................................................................TAGCTTCCTTGTGAAGGGCTA................................................... 21 2 1 2.00 2 1 1 0 0 0 0
........................................................................................TCTAGCTGCCTTGTGAAGGGCTT................................................... 23 1 1 2.00 2 0 1 1 0 0 0
..........................................................................................TAGCTGCATTGCGAAGGGCTT................................................... 21 2 1 2.00 2 0 0 2 0 0 0
..........................................................................................AAGCTGCATTGTGAAGGGCTT................................................... 21 2 1 2.00 2 0 0 2 0 0 0
..........................................................................................TAGCTGCCTTGTGCAGCGCTT................................................... 21 2 1 2.00 2 0 0 2 0 0 0
..........................................................................................TACCTGCTTTGTGAAGGGCTT................................................... 21 2 1 2.00 2 1 0 1 0 0 0
..........................................................................................TAGCTGCCTTGTCAAGCGCTT................................................... 21 2 1 2.00 2 0 0 2 0 0 0
..........................................................................................TAGATGCCTTGCGAAGGGCTT................................................... 21 2 1 2.00 2 0 1 1 0 0 0
..........................................................................................TAGCTGCCTTGGGAAGCGCTT................................................... 21 2 1 2.00 2 0 0 2 0 0 0
..........................................................................................TAGCTGCCGTCTGAAGGGCTT................................................... 21 2 1 2.00 2 0 2 0 0 0 0
..........................................................................................TAGCTGCCTTGTGAAGGGCTTGT................................................. 23 2 1 2.00 2 0 0 2 0 0 0
..........................................................................................TATCTGCCTTGTGAAGGGCTA................................................... 21 2 1 2.00 2 2 0 0 0 0 0
..........................................................................................TAGCTGACTTGTCAAGGGCTT................................................... 21 2 1 2.00 2 0 1 1 0 0 0
..........................................................................................TACCGGCCTTGCGAAGGGCTT................................................... 21 3 1 2.00 2 0 0 2 0 0 0
..........................................................................................TAGCTGCCTTGTCAAGGGCTTA.................................................. 22 1 1 2.00 2 1 0 1 0 0 0
..........................................................................................TAGCTGCCTTGTGATGGGCT.................................................... 20 1 1 2.00 2 0 0 2 0 0 0
..........................................................................................GAGCTGCCTTGGGAAGGGCTT................................................... 21 2 1 2.00 2 0 0 2 0 0 0
..........................................................................................TAGCTGACTTGTGAAAGGCTT................................................... 21 2 1 2.00 2 0 2 0 0 0 0
..........................................................................................TAGCTGCCGTGTGAAGGGCTA................................................... 21 2 1 2.00 2 0 2 0 0 0 0
..........................................................................................TAGCTGCCTTGGGAGGGGCTT................................................... 21 2 1 2.00 2 0 0 2 0 0 0
..........................................................................................TAGCTGCCTTGTGACGGGCTC................................................... 21 2 1 2.00 2 1 0 1 0 0 0
..........................................................................................TATCTGACTTGTGAAGGGCTT................................................... 21 2 1 2.00 2 2 0 0 0 0 0
..........................................................................................TAGCTGCCTTGTGATGGGCTTA.................................................. 22 1 1 2.00 2 0 0 2 0 0 0
..........................................................................................TAGCGGCCTTGTGATGGGCTT................................................... 21 2 1 2.00 2 0 0 2 0 0 0
..........................................................................................TAGCTGCATGGTGAAGGGCTT................................................... 21 2 1 2.00 2 0 0 2 0 0 0
..........................................................................................TAGCTTCCTTGTGAATGGCTT................................................... 21 2 1 2.00 2 1 1 0 0 0 0
...........................................................................................TACTGCCTTGTGAAGGGCTT................................................... 20 2 1 2.00 2 1 1 0 0 0 0
..........................................................................................TAGCTGCCTTGTGGATGGCTT................................................... 21 2 1 2.00 2 0 0 2 0 0 0
..........................................................................................TAGCGGCCTTGTGAAGGGCTTA.................................................. 22 1 1 2.00 2 0 0 2 0 0 0
..........................................................................................TAGCTGCCGTGAGAAGGGCTT................................................... 21 2 1 2.00 2 0 0 2 0 0 0
..........................................................................................TAGCTGCCTTGTGAAGGGCTAT.................................................. 22 2 1 2.00 2 1 0 1 0 0 0
..........................................................................................TAGCTGCCTTGTGAATGTCTT................................................... 21 2 1 2.00 2 1 1 0 0 0 0
..........................................................................................TAACTGCCTTGTGAAGCGCTT................................................... 21 2 1 2.00 2 0 0 2 0 0 0
...........................................................................................AGCTGCCTTGTGAAGGGCTTAT................................................. 22 1 1 2.00 2 0 0 0 2 0 0
..........................................................................................TAGCTGCTTTGTGAAGGGCTC................................................... 21 2 1 2.00 2 0 1 1 0 0 0
..........................................................................................TAGCTGCCTTGTGAGGGGATT................................................... 21 2 1 2.00 2 1 0 1 0 0 0
..........................................................................................TAGCGGCCTTGTGACGGGCTT................................................... 21 2 1 2.00 2 0 0 2 0 0 0
...........................................................................................AGCTGCCTAGTGAAGGGCTT................................................... 20 1 1 2.00 2 0 0 0 2 0 0
..........................................................................................TAGCTGCCTTGTGCAGGGCTTA.................................................. 22 1 1 2.00 2 0 0 2 0 0 0
..........................................................................................TAGTTGCCTTGTGAAGGGCTTA.................................................. 22 1 1 2.00 2 1 1 0 0 0 0
..........................................................................................TAGCTGACTTGTGAAGGGCT.................................................... 20 1 1 2.00 2 1 0 1 0 0 0
..........................................................................................AAGCTGCCTTGCGAAGGGCTT................................................... 21 2 1 2.00 2 0 0 2 0 0 0
..........................................................................................TAACAGCCTTGTGAAGGGCTT................................................... 21 2 1 2.00 2 0 0 2 0 0 0
..........................................................................................TAGCTGCCTTGAGAAGGGCTTT.................................................. 22 2 1 2.00 2 0 2 0 0 0 0
..........................................................................................TATCTGCCTTGTGAAGGGCT.................................................... 20 1 1 2.00 2 2 0 0 0 0 0
...........................................................................................AGCTGCCTTGTGAAGGGCTTT.................................................. 21 1 1 2.00 2 0 0 0 2 0 0
..........................................................................................TATCTGCCTTGTGAAGGGCTC................................................... 21 2 1 2.00 2 2 0 0 0 0 0
..........................................................................................TAGCTGCATTGTGAAGGGATT................................................... 21 2 1 2.00 2 1 0 1 0 0 0
..........................................................................................TAGCTGCCTTGTGCAGGACTT................................................... 21 2 1 2.00 2 0 2 0 0 0 0
..........................................................................................TAGCTGCCTTGTGACCGGCTT................................................... 21 2 1 2.00 2 0 0 2 0 0 0
..........................................................................................TAGCTGCCTTGTGAAGGGTT.................................................... 20 1 1 2.00 2 1 1 0 0 0 0
..........................................................................................TAGCTGCATTGTGAAGGGTTT................................................... 21 2 1 2.00 2 0 0 2 0 0 0
..........................................................................................TAGCTGCCTAGTGAAGGGCTT................................................... 21 1 1 2.00 2 0 1 1 0 0 0
..........................................................................................TAGCTGACTTGTGAAGGGCTG................................................... 21 2 1 2.00 2 0 1 1 0 0 0
...........................................................................................AGCTGCCTTGTGAAGTGCTT................................................... 20 1 1 2.00 2 0 0 1 1 0 0
..........................................................................................TAGCTGCCTTTTGAGGGGCTT................................................... 21 2 1 2.00 2 0 0 2 0 0 0
..........................................................................................TAACTGCCTTGTGAAGAGCTT................................................... 21 2 1 2.00 2 0 0 2 0 0 0
...........................................................................................AGCTGCCTCGTGAAGGGCTT................................................... 20 1 1 2.00 2 0 0 0 2 0 0
..........................................................................................TAGCTTCCTTGTTAAGGGCTT................................................... 21 2 1 2.00 2 2 0 0 0 0 0
..........................................................................................TAGCTGCCATGTGAAGGGCTTAA................................................. 23 2 1 2.00 2 0 0 0 2 0 0
..........................................................................................TAGCTGCCTTGTGAAGGGTTC................................................... 21 2 2 1.50 3 1 1 1 0 0 0
...........................................................................................TACTGCCTTGTGAAGGGCTTA.................................................. 21 2 1 1.00 1 1 0 0 0 0 0
..........................................................................................TAGCTGCCTTGTGCAGGGCTTC.................................................. 22 2 1 1.00 1 0 0 1 0 0 0
..........................................................................................TAGCTCCCTTGTGAAGGGCT.................................................... 20 1 1 1.00 1 0 0 1 0 0 0
..........................................................................................TAGCTGCCTTGTGAAGAGCTTAACT............................................... 25 3 1 1.00 1 0 0 1 0 0 0
..........................................................................................TAGCTGCGTTGGGAAGGGCTTA.................................................. 22 2 1 1.00 1 0 0 1 0 0 0
..........................................................................................TAGCTGCCTTGGGAAGGGATTT.................................................. 22 3 1 1.00 1 0 0 1 0 0 0
..........................................................................................GAGCTGCCTTGCGAAGGGCTT................................................... 21 2 1 1.00 1 0 0 1 0 0 0
..........................................................................................TAGCTGACTTGTGAAGGCCTT................................................... 21 2 1 1.00 1 0 0 1 0 0 0
..........................................................................................TAGCTGCCTTGTGAAGGGGTA................................................... 21 2 1 1.00 1 0 1 0 0 0 0
..........................................................................................TAGCTGCCTTGTGAAAGGCCT................................................... 21 2 1 1.00 1 0 0 1 0 0 0
..........................................................................................TAGCTGCCTTGCGAAGGGCTTT.................................................. 22 2 1 1.00 1 0 0 1 0 0 0
..........................................................................................TAGCTGCCTTGTGAAGGGCG.................................................... 20 1 1 1.00 1 0 0 1 0 0 0
..........................................................................................TAGCTGAGTTGTGTAGGGCTTA.................................................. 22 3 1 1.00 1 0 0 1 0 0 0
..........................................................................................TAGCTGACTTGAGAAGGGCTTA.................................................. 22 2 1 1.00 1 0 0 1 0 0 0
..........................................................................................TGGCTGCCTTGTGAAGGGCTC................................................... 21 2 1 1.00 1 1 0 0 0 0 0
..........................................................................................TAGCTGCCTTGTGAAGGGCTTTTA................................................ 24 3 1 1.00 1 0 0 0 1 0 0
..........................................................................................TAGCTGCCTGGTTAACGGCTTA.................................................. 22 3 1 1.00 1 0 0 1 0 0 0
..........................................................................................AAGCTGCCTTGTGACGGGCTTA.................................................. 22 2 1 1.00 1 0 0 1 0 0 0
..........................................................................................TAGCTGCATTGTGAATGGCTT................................................... 21 2 1 1.00 1 0 0 1 0 0 0
..........................................................................................TAACTGCCTTGTGAAGGGCT.................................................... 20 1 1 1.00 1 0 0 1 0 0 0
..........................................................................................TAGCTACCTTGTCAAGGGCTT................................................... 21 2 1 1.00 1 0 1 0 0 0 0
..........................................................................................AAGCTGCCTTATGAAGGGCTT................................................... 21 2 1 1.00 1 0 0 1 0 0 0
..........................................................................................TAGCTGCCTTATGAAGGGCTA................................................... 21 2 1 1.00 1 0 1 0 0 0 0
..........................................................................................TAGCTGACTTGTGAAGCGCTT................................................... 21 2 1 1.00 1 0 0 1 0 0 0
..........................................................................................TAGCTGCCTTGTGAAGGGATTAT................................................. 23 2 1 1.00 1 0 1 0 0 0 0
..........................................................................................TAACTGCATTGTGACGGGCTT................................................... 21 3 1 1.00 1 0 0 1 0 0 0
..........................................................................................TAGCTGCCTTGTGTAGGACTT................................................... 21 2 1 1.00 1 0 1 0 0 0 0
..........................................................................................TAGCTGCTTTGTGAAGGGCTTT.................................................. 22 2 1 1.00 1 0 0 1 0 0 0
..........................................................................................TCGCTGCCTTGTGACGGGCTT................................................... 21 2 1 1.00 1 0 0 1 0 0 0
..........................................................................................TAGGTGACTTGTGAAGGGCTT................................................... 21 2 1 1.00 1 0 0 1 0 0 0
..........................................................................................TAGCTGCCTTGTGAGGAGCCTAC................................................. 23 3 1 1.00 1 0 0 1 0 0 0
..........................................................................................TAGGTGCCTTGTGCAGGGCTT................................................... 21 2 1 1.00 1 0 0 1 0 0 0
..........................................................................................TAGCTGACTTGTGAAGGTCTT................................................... 21 2 1 1.00 1 0 0 1 0 0 0
..........................................................................................AAGCTGCCTTTTGAAGGGCTT................................................... 21 2 1 1.00 1 0 0 1 0 0 0
..........................................................................................TAGCTGCCTTGTGACGGCCTT................................................... 21 2 1 1.00 1 0 0 1 0 0 0
..........................................................................................TAGCTGCCTTGTTAACGGCTTA.................................................. 22 2 1 1.00 1 0 0 1 0 0 0
..........................................................................................TAGCTGCTTTGTGAAGGG...................................................... 18 1 1 1.00 1 0 1 0 0 0 0
..........................................................................................GAGCTGCCTTGTGATGGGCTT................................................... 21 2 1 1.00 1 0 0 1 0 0 0
..........................................................................................TATCTGCCTTGTGAAGGGCTTC.................................................. 22 2 1 1.00 1 0 0 1 0 0 0
..........................................................................................TAACTGCCTTGAGAAGGGCTT................................................... 21 2 1 1.00 1 0 0 1 0 0 0
..........................................................................................TAGCTGACTTGTGAATGGCTTA.................................................. 22 2 1 1.00 1 0 1 0 0 0 0
..........................................................................................TAGCCGCATTGCGAAGGGCTT................................................... 21 3 1 1.00 1 0 0 1 0 0 0
..........................................................................................TAGCTGCCTTGTGAAGGGCAT................................................... 21 1 1 1.00 1 0 1 0 0 0 0
..........................................................................................TAGGTGCCTTGCGAAGGGCTT................................................... 21 2 1 1.00 1 0 1 0 0 0 0
..........................................................................................TAGCTGCCTTGGGAAAGGCTT................................................... 21 2 1 1.00 1 0 0 1 0 0 0
..........................................................................................TAGCTTCCTTGTGAAGGG...................................................... 18 1 1 1.00 1 1 0 0 0 0 0
..........................................................................................TAGCTTCCTTGTGCAGGGCTT................................................... 21 2 1 1.00 1 0 0 1 0 0 0
..........................................................................................AAGCTGCCGTGTGAAGGGCTTA.................................................. 22 2 1 1.00 1 0 0 1 0 0 0
..........................................................................................TAGCTGCCTGGTGAAGGGCT.................................................... 20 1 1 1.00 1 0 0 1 0 0 0

Anti-sense strand reads

ATAAATTTTTCACTATTCTTTACAGGATCCTTCATTAAACATACAGTCGGAGAGTAAACCGGACGGATCGACTGAAATTTAATTATAACGATCGACGGAACACTTCCCGAATGCACACTAACGCTAAGTTGAACGTCTTATACATTTCCTGAATCACAAAAA

***********************************.....(((((.(((((.((((..(((..((.((((..................)))))).)))..)))).))))).)))))...........*********************************** 		Read size # Mismatch Hit Count Total Norm Total V039

embryo

 V106

head
......................................................................................AAAGAACGACGGAGCACTTC........................................................ 20 3 10 0.10 1 0 1
......................................ACGCACAGTCGGGGAGTAA......................................................................................................... 19 3 17 0.06 1 1 0
.....................................................................................TAACGATCGACCGTAGACT.......................................................... 19 3 20 0.05 1 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Type Alignment
droAna3 scaffold_13117:4815161-4815322 - dan_130 candidate-rescued TAT--TT----------------AAA--------AAGT-GATAAGAAATGTCC------------------TAGGAAGTAATTTGTATGTCAGCCTCTCATTTGGCCTGCCTAGCTG---ACTTTA-AATTAATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTGATTGCGATTCAACTTGCAGA-ATATG--TAAAGGACTTAG-----TGTTTTT-
droBip1 scf7180000395508:43129-43290 + GTA--TT----------------AAA--------AAGT-GATTAGATTTGTCC------------------TTGAAAGTAAATTGTATGTCAGCCTCTCATTTGGCCTGCCTAGCTG---ACTTTA-AATTAATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTGATTGCGATTCAACTTGAAAA-ATATT--TAAAGGACTTTG-----TGTTTTC-
droKik1 scf7180000302544:871475-871627 + TAT--GT----------------GAAGGAAAAGCAA-----------G----TGCC---TGTG-G----AAGTGCTAGTTAATTGTATGTCAGTTTTTCATTTGGCCTGCCTAGCTG---ACTTTC--ATAAATATCGCTAGCTGCCTTGTGAAGGGCTTACGTGTGATTGCGGTTCAACGGAAAGA-GGATA--TAGAAG-----------------A-
droFic1 scf7180000453927:606423-606540 - --------------------------------------------------------------------------GAAGATAATTGTATGTCAGTTTTTCATTTGGCGTGCCTAGCTG---ACTTCTGTTTAAATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTAATTGCAGCTCAACTGACTGAGATATA-------------------------TA
droEle1 scf7180000491011:1178485-1178640 - AGT--TA----------------AGT--------GAAT-ATT-GGTTTTGC-CGCA---TCTGAG----AAAGTGAAGTTAATTGTATGTCAGTTTTTCATTTGGCGTGACTAGCTG---ACTTTTGTTTAAATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTGATTGCAGCTCAACTGACTGGGATATA-------------------------TA
droRho1 scf7180000779506:958278-958418 - AGT--TA----------------AGT--------GAAT-ATT-------------------TGGG----AAAGTGAAGTTAATTGTATGTCAGTTTTTCATTTGGCGGGCCTAGCTG---ACTTCTGTTAAAATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTGATTGCAGCTCAACTGGCAAGGATATA-------------------------T-
droBia1 scf7180000301760:1131716-1131856 - GAG--TT----------------G-------------------------TG-CGCGG--TTTC-G----GCGGCGAGGTTAATCATATGTCAGTTTTTCATTTGGCCTGGCTAGCTT---ACTCCT-GTTCAATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTGGTTGCGGCTCAACTGGCAGG-ATACG--CTA--------------------A-
droTak1 scf7180000415179:121508-121683 - TTGGTTTCTTAGTTTCTTAGTTCAAA--------AAGTTGATTAAATTTCC-CGCGGTTTGCA-G----AATGTGAAGTTAATTGTATGTCAGTTTTTCATTTGGCTTGCCTAGCTG---ACTTCTGTTTAAATATCGCTAGCTGCCTTGTGAAGGGCTTACGTGTGATTGCGGTTCAACTGGCAGG-ATGTG-------------------------T-
droEug1 scf7180000409277:495692-495871 - TTT--TT--GAGTT--TTGGTTAAAT--------GAGT-----TGAAT-TG-CGCG---TTTG-G----AAAGTGAAGTTAATTGTATGTCAGTTTTTCATTTGGCGTGCCTAGCTG---ACCTTTGTTTAAATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTGATTGCAGCTCAACTGGCAGG-ATAAATG------TCCTTTGATATTGTCTTT-
dm3 chrX:174201-174325 - dme-mir-980 Known_mirbase AAT--T------------------------------------------TCC-CGCG---TGTG-A----AATACGAAGTTGATTGTATGTCAGTTTTTCATTTGGCCTGGCTAGCTT---ACTCCTTTTTAAATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTAATTGCAGTTCGACT---------------------------------------
droSim2 x:113228-113369 - dsi-mir-980 Known_mirbase AAT--T------------------------------------------TTC-CGCG---TGTG-A----AATACGAAGTTGATTGTATGTCAGTTTTTCATTTGGCGTGGCTAGCTC---ACTACTTTTTTAATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTAATTGCAGTTCAACTGCCAAA-TAATATAT--------------------TTT-
droSec2 scaffold_10:47176-47318 - dse_14 confident AAT--T------------------------------------------TTC-CGCG---TGTG-A----AATACGAAGTTGATTGTATGTCAGTTTTTCATTTGGCGTGGCTAGCTC---ACTACTTTTTTAATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTAATTGCAGTTCAACTGCCAAA-TAATATAT-------------------TTTT-
droYak3 X:117064-117205 - dya_19 confident GTT--TA----------------ATA--------AATT-AAT--GATTTCC-CGCG---TGTG-A----GATGTGAAGTTGATTGTATGTCAGTTTTTCATTTGGCGTGCCTAGCTT---AGCTTTTTTTAAATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTAATTGCAGTTCGACTCG-------------------------------------
droEre2 scaffold_4644:121634-121783 - der_10 confident AGT--TA----------------AAT--------AAAT-AA------TTCC-CGCG---TGTG-A----AATGTGAAGTTGATTGTATGTCAGTTTTTCATTTGGCGTGCCTAGCTT---ACCTCTTTTTAAATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTAATTGTAGTTCGACTGCAAAA-TTATATA-----------------------T-
dp5 XL_group1e:4097618-4097781 - dps-mir-980 Known_mirbase GAG--TG----------------ACA--------AATT-TCTGTGAATTCC-CGCC-----AC-A----AAAGAGAAACAAATTGAATGTGAGTCTCTCACATGGCTGGTCTAGCTG---ACTTGT-TTCTAATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTTTTTGTAGCCCAACGTAAAGC-CGAA-AA------TCGTAAAAT-----ATTT-
droPer2 scaffold_17:1039167-1039330 - dpe_10 confident GAG--TG----------------ACA--------AAGT-TCTGTGAATTCC-CGCC-----AC-A----AAAGAGAAACAAATTGTATGTGAGTCTCTCACATGGCTGGTCTAGCTG---ACTTGT-TTCTAATACTGCTAGCTGCCTTGTGAAGGGCTTACGTGTTTTTGTAGCCCAACGTAAAGC-CGAA-AA------TCGTAAAAT-----ATTT-
droWil2 scf2_1100000004909:8731769-8731859 + dwi_30 confident AA-------------------------------------------------------------------------------ATTGTGTGTGAGTCTTTCACTGGGCGTGCTTAGCTAGAAATTTA-TTTACCATATTGCTAGCTGCCTTGTGAAGTGCTTACGTGTAATTG-------------------------------------------------
droVir3 scaffold_10277:1005-1163 - dvi-mir-980 Known_mirbase TGC--TT----------------AAA--------AGAC-GCTGGGCTATAAAA------TTTGGACCAAATGTGAGAGCGCATTGCATGTGAGTCCCTCATTTGGCAGGTTTAGCTG---CTTTT-AATACGATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTGATTGTTAAACAACTTAAACA-ACAAA--TAA--------------------A-
droMoj3 scaffold_6473:11075528-11075659 + dmo_9 confident AGT--GC----------------AAT--------AAGT-GTTTAAGTTATT------------------TATATGAACCGCATTGCATGTGAGTCCCTCATTTGGTGCGCTTAGCTG---TTTTTCAATTTGATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTGTTTGTAATACAAC----------------------------------------
droGri2 scaffold_14853:6339036-6339147 + dgr_25 candidate-rescued TGA--TT----------------A------------------------------------------------TGAGAGCGCATTACATGTGAGTCCCTCATTTGGCGGACTTAGCTG---CTTTTCAATTTGATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTGATTGTAAATCAACT---------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droAna3
TAT--TT----------------AAA--------AAGT-GATAAGAAATGTCC------------------TAGGAAGTAATTTGTATGTCAGCCTCTCATTTGGCCTGCCTAGCTG---ACTTTA-AATTAATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTGATTGCGATTCAACTTGCAGA-ATATG--TAAAGGACTTAG-----TGTTTTT-SizeHit CountTotal NormTotalM044

Female-body		M058

Embryo		V039

Embryo		V055

Head		V105

Male-body		V106

Head
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTT............................................................21128659.0028659952327934581004514093
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTTA...........................................................2211822.001822283145527501492
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCT.............................................................201246.0024610010126316
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTTT...........................................................221238.002385700527653
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTA............................................................211182.0018210019090
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTTAG..........................................................231120.00120500343150
............................................................................................................................................AGCTGCCTTGTGAAGGGCTT............................................................20196.009672007611
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTC............................................................21196.009601055238
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTG............................................................21182.008200026218
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTTAA..........................................................23166.0066300018711
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTTAT..........................................................23162.00622300171210
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTTG...........................................................22145.004530018915
...........................................................................................................................................TAGCTGCCTTGTGAAGGG...............................................................18137.00376105223
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTTTT..........................................................23131.00317009114
............................................................................................................................................AGCTGCCTTGTGAAGGGCTTA...........................................................21131.00312800210
...........................................................................................AGCCTCTCATTTGGCCTGCCTAGC.........................................................................................................24130.00302640000
...........................................................................................................................................TAGCTGCCTTGTGAAGGGC..............................................................19122.00222501401
..........................................................................................................................................CTAGCTGCCTTGTGAAGGGCTT............................................................22112.0012300621
.............................................................................................................................................GCTGCCTTGTGAAGGGCTT............................................................1919.009400131
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTTAAA.........................................................2418.008100601
............................................................................................................................................AGCTGCCTTGTGAAGGGCT.............................................................1917.007700000
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTTAC..........................................................2315.005100202
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTTC...........................................................2215.005000212
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTTATT.........................................................2415.005100031
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTTTTT.........................................................2414.004200011
...........................................................................................................................................TAGCTGCCTTGTGAAGGGT..............................................................1914.004100021
...........................................................................................AGCCTCTCATTTGGCCTGCCTAG..........................................................................................................2314.004310000
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTTTG..........................................................2314.004000013
..............................................................................................................................................CTGCCTTGTGAAGGGCTT............................................................1813.003200010
............................................................................................................................................AGCTGCCTTGTGAAGGGCTTTT..........................................................2213.003300000
............................................................................................................................................AGCTGCCTTGTGAAGGGCTTAA..........................................................2213.003300000
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTTGT..........................................................2312.002000200
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTAT...........................................................2212.002000101
............................................................................................................................................AGCTGCCTTGTGAAGGGCTTAT..........................................................2212.002200000
............................................................................................................................................AGCTGCCTTGTGAAGGGCTTT...........................................................2112.002200000
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCG.............................................................2011.001000100
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTTTTA.........................................................2411.001100000
droBip1
GTA--TT----------------AAA--------AAGT-GATTAGATTTGTCC------------------TTGAAAGTAAATTGTATGTCAGCCTCTCATTTGGCCTGCCTAGCTG---ACTTTA-AATTAATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTGATTGCGATTCAACTTGAAAA-ATATT--TAAAGGACTTTG-----TGTTTTC-SizeHit CountTotal NormTotal
No Reads
droKik1
TAT--GT----------------GAAGGAAAAGCAA-----------G----TGCC---TGTG-G----AAGTGCTAGTTAATTGTATGTCAGTTTTTCATTTGGCCTGCCTAGCTG---ACTTTC--ATAAATATCGCTAGCTGCCTTGTGAAGGGCTTACGTGTGATTGCGGTTCAACGGAAAGA-GGATA--TAGAAG-----------------A-SizeHit CountTotal NormTotal
No Reads
droFic1
--------------------------------------------------------------------------GAAGATAATTGTATGTCAGTTTTTCATTTGGCGTGCCTAGCTG---ACTTCTGTTTAAATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTAATTGCAGCTCAACTGACTGAGATATA-------------------------TASizeHit CountTotal NormTotal
No Reads
droEle1
AGT--TA----------------AGT--------GAAT-ATT-GGTTTTGC-CGCA---TCTGAG----AAAGTGAAGTTAATTGTATGTCAGTTTTTCATTTGGCGTGACTAGCTG---ACTTTTGTTTAAATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTGATTGCAGCTCAACTGACTGGGATATA-------------------------TASizeHit CountTotal NormTotal
No Reads
droRho1
AGT--TA----------------AGT--------GAAT-ATT-------------------TGGG----AAAGTGAAGTTAATTGTATGTCAGTTTTTCATTTGGCGGGCCTAGCTG---ACTTCTGTTAAAATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTGATTGCAGCTCAACTGGCAAGGATATA-------------------------T-SizeHit CountTotal NormTotal
No Reads
droBia1
GAG--TT----------------G-------------------------TG-CGCGG--TTTC-G----GCGGCGAGGTTAATCATATGTCAGTTTTTCATTTGGCCTGGCTAGCTT---ACTCCT-GTTCAATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTGGTTGCGGCTCAACTGGCAGG-ATACG--CTA--------------------A-SizeHit CountTotal NormTotal
No Reads
droTak1
TTGGTTTCTTAGTTTCTTAGTTCAAA--------AAGTTGATTAAATTTCC-CGCGGTTTGCA-G----AATGTGAAGTTAATTGTATGTCAGTTTTTCATTTGGCTTGCCTAGCTG---ACTTCTGTTTAAATATCGCTAGCTGCCTTGTGAAGGGCTTACGTGTGATTGCGGTTCAACTGGCAGG-ATGTG-------------------------T-SizeHit CountTotal NormTotal
No Reads
droEug1
TTT--TT--GAGTT--TTGGTTAAAT--------GAGT-----TGAAT-TG-CGCG---TTTG-G----AAAGTGAAGTTAATTGTATGTCAGTTTTTCATTTGGCGTGCCTAGCTG---ACCTTTGTTTAAATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTGATTGCAGCTCAACTGGCAGG-ATAAATG------TCCTTTGATATTGTCTTT-SizeHit CountTotal NormTotal
No Reads
dm3
AAT--T------------------------------------------TCC-CGCG---TGTG-A----AATACGAAGTTGATTGTATGTCAGTTTTTCATTTGGCCTGGCTAGCTT---ACTCCTTTTTAAATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTAATTGCAGTTCGACT---------------------------------------SizeHit CountTotal NormTotalGSM154618

Ovary		GSM154620

Ovary		GSM154621

Ovary		GSM154622

Ovary		GSM180328

Head		GSM180329

Mixed-body		GSM180330

Embryo		GSM180331

Embryo		GSM180332

Embryo		GSM180333

Embryo		GSM180334

Larvae		GSM180335

Disc		GSM180336

Pupae		GSM180337

S2		GSM239041

Head		GSM239050

Head		GSM239051

S2		GSM239052

S2		GSM246084

Head		GSM266765

S2		GSM280082

Ovary		GSM280083

Ovary		GSM280084

Ovary		GSM280085

Testis		GSM280086

Ovary		GSM280087

S2-NP		GSM280088

S2-NP		GSM312995

Head		GSM313160

Head		GSM313161

Head		GSM313162

Head		GSM313163

Head		GSM313164

Head		GSM313165

Head		GSM343287

Embryo		GSM379050

Ovary		GSM379051

Ovary		GSM379052

Ovary		GSM379053

Ovary		GSM379054

Ovary		GSM379055

Ovary		GSM379056

Ovary		GSM379057

Ovary		GSM379058

Ovary		GSM379059

Ovary		GSM379060

Ovary		GSM379061

Ovary		GSM379062

Ovary		GSM379063

Ovary		GSM379064

Ovary		GSM379065

Ovary		GSM379066

Ovary		GSM379067

Ovary		GSM424739

S2		GSM424740

S2		GSM424741

S2		GSM467729

Female-body		GSM467730

Female-body		GSM467731

Female-body		M002

CS		M003

Male-body		M004

Male-body		M005

ML-DmD32		M006

ML-DmD32		M029

OSC		M030

OSC		M031

OSC		M032

S2-R+		M033

S2-R+		M034

S2-R+		M035

S2-R+		M036

S2-R+		M037

S2-R+		M038

S2-R+		M039

S2-R+		M048

S2-R+		OSS2

OSS		OSS6

OSS		OSS7

OSS		OSS8

OSS		S1

Head		S10

Embryo		S11

Embryo		S12

Embryo		S13

Embryo		S14

Embryo		S15

S2-GMR		S16

Kc		S17

Larvae		S18

Larvae		S19

Pupae		S2

Head		S20

Pupae		S21

Disc		S22

Head		S23

Female-body		S24

Male-body		S25

Larvae		S26

Larvae		S27

Pupae		S28

Pupae		S29

Head		S3

Male-body		S30

S2-GMR		S31

S2		S32

S2		S33

Kc		S34

Kc		S35

Kc		S4

Female-body		S5

Disc		S6

Embryo		S7

Embryo		S8

S2		S9

Embryo		SRR001337

Head		SRR001338

Head		SRR001339

Head		SRR001340

Head		SRR001341

Head		SRR001342

Head		SRR001343

Head		SRR001344

Head		SRR001345

Head		SRR001346

Head		SRR001347

Head		SRR001348

Head		SRR001349

Head		SRR001664

Head		SRR010951

Ovary		SRR010952

Ovary		SRR010953

Ovary		SRR010954

Ovary		SRR010955

Ovary		SRR010956

Ovary		SRR010957

Ovary		SRR010958

Ovary		SRR010959

Ovary		SRR010960

Ovary		SRR014268

Embryo		SRR014269

Embryo		SRR014270

Embryo		SRR014271

Embryo		SRR014272

Embryo		SRR014273

Ovary		SRR014274

Ovary		SRR014275

Ovary		SRR014276

Ovary		SRR014277

Ovary		SRR014278

Ovary		SRR014279

Ovary		SRR014280

Ovary		SRR014281

Ovary		SRR014282

Ovary		SRR023197

S2		SRR023399

S2		SRR023400

S2		SRR023402

S2		SRR023407

S2		SRR029028

S2		SRR029029

S2		SRR029030

S2		SRR029031

S2		SRR029032

S2		SRR029033

S2		SRR029608

Head		SRR029633

Head		SRR030145

gb3		SRR031692

Head		SRR031693

Head		SRR031694

Head		SRR031696

Head		SRR031697

Head		SRR031698

Head		SRR031699

Head		SRR031700

Head		SRR031701

Head		SRR031702

Head		SRR031703

Head		SRR031704

Head		SRR032092

S2		SRR032093

S2		SRR032094

S2		SRR032095

S2-NP		SRR032096

S2-NP		SRR032152

Head		SRR060643

Testis		SRR060644

Ovary		SRR060645

Testis		SRR060646

Ovary		SRR060647

Ovary		SRR060648

Ovary		SRR060649

Ovary		SRR060650

Testis		SRR060651

Ovary		SRR060652

Testis		SRR060653

Ovary		SRR065151

Ovary		SRR065152

Ovary		SRR065153

Ovary		SRR065154

Ovary		SRR065155

Ovary		SRR065800

Ovary		SRR065801

Ovary		SRR065802

Ovary		SRR065803

Ovary		SRR065804

Ovary		SRR065805

Ovary		SRR065806

Ovary		SRR065807

Ovary		SRR097865

S2-NP		SRR097866

S2-NP		SRR097867

S2-NP		SRR298536

Ovary		SRR298537

Ovary		SRR298711

Ovary		SRR298712

Ovary		SRR317110

Ovary		SRR317111

Ovary		SRR317112

Ovary		SRR317113

Ovary		SRR317114

Ovary		SRR317115

Ovary		SRR317116

Ovary		SRR317117

Ovary		SRR341115

S2		SRR341116

S2		SRR341117

S2		SRR341118

S2		SRR351332

Mixed-body		SRR351333

Mixed-body		T004

OSC		T005

CME-L1		V001

Embryo		V002

Embryo		V003

S2		V006

Female-body		V007

Head		V008

S2		V009

CME-L1		V010

ML-DmD20-C5		V011

Sg4		V012

Male-body		V013

Head		V014

DTT		V015

DreRFHV		V018

Kc167		V019

GM2		V020

S2-R+		V021

ML-DmD21		V022

ML-DmD32		V023

Head		V024

Kc167		V025

S2-R+		V026

1182-2H		V027

ML-DmD21		V028

CME-W1-Cl.8+		V029

ML-DmD9		V030

ML-DmD8		V031

GM2		V032

S1		V033

CME-W1-Cl.8+		V034

ML-DmD16-C3		V035

ML-DmD32		V036

ML-DmD20-C5		V037

S2		V038

S2		V063

Ovary		V0632

Ovary		V064

Ovary		V0642

Ovary		V065

Ovary		V0652

Ovary		V066

Ovary		V0662

Ovary		V067

S2-NP		V073

mbn2		V074

S3		V075

ML-DmBG1-C1		V076

ML-DmBG3-C2		V077

Head		V078

Head		V079

Head		V080

Head		V081

Embryo		V082

Embryo		V083

Male-body		V084

Female-body		V085

CME-W2		V086

Female-body		V088

Ovary		V0882

Ovary		V089

Ovary		V0892

Ovary		V090

Male-body		V091

fGS/OSS		V092

Male-body		V093

Male-body		V094

S2-R+		V095

S2-R+		V096

Ovary		V097

Ovary		V098

Ovary		V125

ML-DmD9		V126

CME-L1		V127

G2		V128

S3		V129

ML-DmBG1-C1		V130

ML-DmBG3-C2		V131

ML-DmD16-C3		V132

ML-DmD32		V133

Sg4		V134

ML-DmD8		V135

CME-W2		V136

Male-body		V137

Head		V138

Male-body		V139

Female-body		V140

Female-body		V141

Female-body		V142

Female-body		V144

OSC		V145

S2		V146

S1		V147

1182-2H		V148

mbn2		GSM1528798

follicle cells
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTT............................................................2117300070.0073000700000210004212229041930030441214508922329820124194180421522526513830417428328954014612661869079193168763123716625012314273313200000000000000000000042288103927383491521431634422951274636250287214343981210629727601201131532046338430001001000346619876614151105737723763738848488811632754830014891026377508431964861679327724101104527419195242051761349111381971213892966325111212321451131802704160143380200000271248131582201118953220628315355124486640380094587105123716224875995206246000014021549216263539492876511692411489332541116222925655112555865549792264012043548074163900184456655912997361725504834771330780525054130441139971086191418112493271133341319724222519350187027439225024351078835555981674656985615965069203528364216164223225782193794224578519729010181331173317576615271915239720555372192082839797413614862382136560152411552511368555575157671418277629256119191113545922559521692045171696250
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTTA...........................................................221365806.0036580600002152330331026240071002254229407419721118178222152733544314442111193221483638293051423346109135504810000000000000000000221644021043812105322260620463661248522158431021621972112561282049194060309168132963913654220216027517283221000021000014797515612311632169664482216261101602106715158020584304088861130063561484248181941404243472347311305191166133852381114310538293000000142403080002233117170114132662575764157539635329634611325530394922590000110112615184147120559983786710524611113113361555681593147213544145748331142356215454099231813743135881293102721071700231133618954381502831184752968762340132837425616426214644445623700583732251193015381392446691898311181148723464212164103214411881485317435195179637514242431616232825226303149206661009736490
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCT.............................................................201140583.001405830000000000000000090032411015486010151100482917491222251223192943513175156000000000000000000000000000041361101010002002000554790501102050034600022402122325000000000047315602192116814006111000820295493127943147878104034105813018132029501583111614401916901000503000000620001003928396430524878158290000310023450036100006263206274103615100038101337612103140911376158723808641244056112018191861130729365581558855650112150147173176303642561292852061832122011969793855288717321070107269982543271143230920727593811108334227325179210938610614401157177371931730
...........................................................................................AGTTTTTCATTTGGCCTGGCTAGC.........................................................................................................24122741.002274100003000040004002100000000101021201001000002030100001000010100000000000000000000015042470170203000175910013129013001043300760004426010000000400000000600000020100073352434450800014270310312031365151204650500000000000010000000000014612293235104725166239751510428086899435200000200512493937227635824056168121138842627212181645324519152210311537210105010152331391101931218113390031320003222443002120782187021824158911046210001270121125235390
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTTT...........................................................22114710.001471000000010000001000170001180462000000000200224511811101400100000000000000000000000000010062042720313001519006516454334012330012510140000001028054130000000000522002012030312010000014351102188664196104074007410070342300077417962024000000001000000630000004323051975942788001400003400330000951287218816063936669113297411884418710460192111610347067353462403012070668576142893326253413171423682212282201336131283131798153143123887921420020694116112327011613422684611
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTTAG..........................................................23114518.001451800000000000001000000001002470000000033161113022211190015628000000000000000000000000000002000000000000000000001010000000000000000000000000000000352700643322010230000009056101130000310100020000225114000100021490000052000000268317220132613370000000012001800003501011732021594478878112221222057135352453293121023646457231313738394141104153885825101038232323412119926552371634142491418751011620614449380141602102286152221169371832321912069949013330
...........................................................................................................................................TAGCTGCCTTGTGAAGGG...............................................................18114230.001423000000000000000001000010102500000120010001000400120000000010000000000000000000000000000100000010010100201460030000001010100000111000010000004000051002650000000002942345116030010000000122016832211504010000010000002100100016814316162436860000000095118840000111212418461221151001615338950311871756138751707681112735036439220000010211164421251131122214223432273310001221127651271021129801744116111261153349151611193311443634210
...........................................................................................................................................TAGCTGCCTTGTGAAGGGC..............................................................19110317.0010317000000000000000002000203031901031011030021000101100031000000000000000000000000000000000030000000000000020428000000000001010000000000003000000513003110178000000000357389922143010111031012002514251480000000001000000630000002152041091315286600000000572458000017144772070186211151166486106282135419545151191127999448596464033121101059986109430232316117751410401002052721229103169244845595182932185720048151433200
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTTAT..........................................................2319378.0093780000100000001900010000010022000000001210021118191101017005000000000000000000000000002005528561044104480039290961271413021101019101800001021241131100000000002280434375187000200000118394238883750740510046210120230200022353211322501000140800000101000000228168804881528100901046800470000620943013610816041801966156311104920123810112383104466252215231263417092837449211516715134101211102822926111714479042065621736362345331230136521145151070663833542590
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTC............................................................2118349.008349000010000000020000000000001900000000010000010001011100451510000000000000000000000000000001000000000000000000000100000000000000000000000100000000100010013300000000061173822000003002000000204821100000000000000000100000030322513242318000100006003000036144331101283122815438261571561968112404527824157141071391211440127621643211479805321699241433190132866103110258120942673235935510541411615191118413822701720
..........................................................................................................................................CTAGCTGCCTTGTGAAGGGCTT............................................................2217176.0071760000000000000000000000000013100000000000000101010100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200201205702000000010010228011000120000000001046200001000001200000010000007810059041300000000100300002204247144144600272927634196282207515510553164214518106142001000501431001068121251162119551102290129159310538101932549756272417205719161314231006767732400
............................................................................................................................................AGCTGCCTTGTGAAGGGCTT............................................................2016689.00668900000000000000000000000006242000000000000011000100001106717500000000000000000000000000000010000000000000000143410000000011000010000100000000000001001001155000000000150137914183901107101000100415281812000100000100000001000000155177132334200011001300000001013229685342119084752297068165313420312391211111991614121102353216141031078726321630400214071282180262357125913124735106685141736880757381870
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTTAA..........................................................2314602.00460200000100100002000300010000170000000021131013102132213360100000000000000000000000100009162036300230073610244042241881100311301500000000802500000000002021400116055620030000004501522426353801900610020408406212002802010003310000001840200002091085522442516300311015390028000068034147832421120106479603318571330012823447201277921101304493191184161459849227827824105141701144760620433821520322928483814882735031251110540
...........................................................................................AGTTTTTCATTTGGCCTGGCTAG..........................................................................................................2314164.00416400000000000000000000000000200000000000000000000000000021001000000000000000000000000025032000000200000000610200002002010010000010010000001000000000000080000231813817374001604702000201051200101110000000000000000000000007847210131014185722383394839200002202329561214011611271057031312411403711727731192660016041331215911313532226600102000142249301212169592145937326023030101713683891220
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTTC...........................................................2213041.0030410000000000000100000000000028000000000000013100100030100000000000000000000000000000000002030000000100000011103300000000004000000000262771200000000001000000010200000000009131112213100200200000000016142300000000002000001000000074424032170000000013001100004200444819830112045311152057852104103016518111862780200020235423111242336852050105032838100014541060645601113120200923442320
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTA............................................................2112871.0028710000000000000100000000000214000000000001102013010002001140000000000000000000000000000000010000000000000001000000010000000000000000000000000001120007110538000000000806391121100000000010000054626000000000040000014002000120747310106000000003003000030015112739313110182772302142351103610315988719100421030114283617131289450004638110290613633840301213238012984027175302401426664740
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTG............................................................2112857.0028570000000001000000010000000040000000100000000001000010011310000000000000000000000000000001000000000000000010000000000000000000100000000000000010000000009001000000301516171000000000001000211504400000000000000000000000043213501830000000000020000010043411612600115121401221026917513120107135543858210010014795719832525373540121208281051100133432810004650806320114130201001210524360
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTTG...........................................................2212823.00282300000000001011000100000001500000000000101000200020002000000000000000000000000000000000110000000000000002120000010000000000000002000000000002100020000260000000007202440450500300001030020341510101001004000000000000046443907170000000040010000320431726550021912336611341731304038901410333874021101011026401282260233388111014047428220026737311029112604349783620252011201150
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTTAC..........................................................2312458.002458000000001000010000000000001000000000110100130000002510000441000000000000000000000000300910000001200020101781012200012002000000002040000000000021200230212100000000012041210514000054030002002016010110000000000000011000000715942715410001000011500140000120226452380180112451102615406110358827142974168210312037901047412113213411232461033460020218721011211213323300140210016112100590
.............................................................................................................................................GCTGCCTTGTGAAGGGCTT............................................................1912331.002331000000000000000000000000006000000000000010011000000000000000000000000000000000000000000000000000001100010100000000000001000000000000000000000000000001700000000091003201000000001000000000047100000000000000000000000007410537110300000000000000005301092333000622224162302772340101710064422943001111001639632364200210582401023043130100113729312184741272634104015135610
...........................................................................................AGTTTTTCATTTGGCCTGGCT............................................................................................................2111350.0013500000000000000000000000100100000000000000000000000010021000000000000000000000000001000000200000010000000000041301000000000000000000000000000000000000000040010129000000000000001010201000001000000000000000000000000030020000200150135225500001000042510040313201052120003139616117250000010011211020100000150000100008230001341201310010001000041616241550
..............................................................................................................................................CTGCCTTGTGAAGGGCTT............................................................181909.00909000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000010013800000000013010162545010000000000000013655000000000000000000100000011378680041000000001002000011000163000106821206270010411615111040000000023210001200130166101001000523000020140001470040110000018210
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTTTT..........................................................231766.007660000000010000000000000110030000000000000001030000100000000000000000000000000000000000010000000114000201453000000020050000000040650000000000000000000019000000000139075562401210620007060014301201000000000000000000000013122133500010000100201000000056800130510200022410000019404253130200000101626200212800108330100001203000017110201421076961024095813370
...........................................................................................................................................TAGCTGCCTTGTGAAGGGT..............................................................191696.0069600000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000700000000000020000000000000000000040000000000000000000000000061100130000000010010000011025112000020716211030600006414351241400000000058101111200001132010000012500001571013440172640022031607290
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTTAAA.........................................................241671.006710000000000000000000010000010000000000011115200000021300000000000000000000000000000030030500000101000002001010001000000200000000003100000000003242201182952100000000002002301100400210200010000206000210000000000061000000081089253000100032003000010020251100100150000211100017201232115228152141701203100102000222581930121624110342120257317021211002358120
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTTATT.........................................................241535.00535000000000100000000000000001000000000000001001000000000100000000000000000000000000000001000000000000040014120000000001000000001011000000000000000000101500000000000000045040033020102000020120100000001000000000000001213904070001000040000000000002430000022100011210200062733316120002000032011011210001530020010270000203490012953071451110043134190
............................................................................................................................................AGCTGCCTTGTGAAGGGCTTA...........................................................211449.0044900000000000000000000000001120100000000000000000000000000000100000000000000000000000011010000000000000000300000000000060000000030100000000000000001000010000000003004011212301200115131122900105015000000000100000000000000369803020001000130010000010003540001001100042200011155514100000000063000010002004200000000008000025901016570210000000320130
...........................................................................................................................................TAGCTGCCTTGTGAAGGGA..............................................................191399.00399000000000000000000000000001000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100200000000000000000000110000000000000000000000000249001000000000800200000000111160002031210103010011711214114010000000002301010100011771000000311300013410140141106020010106564160
..........................................................................................................................................CTAGCTGCCTTGTGAAGGGCTTA...........................................................231296.002960000000000000000000000000000000000000000000000000011000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000001602001001000000000020000000000000000000000008143001000000000100400001100015400010120000836201041821918000000000022001000005014900000000008001037700015181400300010112000
...............................................................................................................................................TGCCTTGTGAAGGGCTT............................................................171282.002820000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008211661327600000000000500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCG.............................................................201280.002800000000000000000000000000010000000100000000000000000010100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004101700100001000001000002401000000000000000000000000722000000000000000400000010010100000531010302000052401212000000010061101102213100001210000000102000010000000000000000004000
droSim2
AAT--T------------------------------------------TTC-CGCG---TGTG-A----AATACGAAGTTGATTGTATGTCAGTTTTTCATTTGGCGTGGCTAGCTC---ACTACTTTTTTAATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTAATTGCAGTTCAACTGCCAAA-TAATATAT--------------------TTT-SizeHit CountTotal NormTotalM023

Head		M024

Male-body		M025

Embryo		M053

Female-body		O001

Testis		O002

Head		SRR553485

Ovary		SRR553486

Ovary		SRR553487

Ovary		SRR553488

Ovary		SRR618934

Ovary		V044

Embryo		SRR902008

Ovary		SRR902009

Testis		SRR1275487

Male larvae		SRR1275485

Male prepupae		SRR1275483

Male prepupae
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTT............................................................2111324.001324170461517706401140749700000
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTTA...........................................................221285.00285815184273115301056701000
...........................................................................................AGTTTTTCATTTGGCGTGGCTAGC.........................................................................................................24185.008515321100001004301000
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCT.............................................................20157.005717101406010117000000
...........................................................................................................................................TAGCTGCCTTGTGAAGGGC..............................................................19157.00579200528000013000000
...........................................................................................................................................TAGCTGCCTTGTGAAGGG...............................................................18140.00400000114000025000000
................................................................................................................................................GCCTTGTGAAGGGCTT............................................................16138.0038000000000038000000
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTTACG.........................................................24117.0017000021500000000000
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTTT...........................................................22112.001200030000007002000
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTTAA..........................................................2319.00900030001003020000
............................................................................................................................................AGCTGCCTTGTGAAGGGCTT............................................................2019.00900070100000100000
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTTAT..........................................................2318.00800000010005001001
...........................................................................................AGTTTTTCATTTGGCGTGGCTAG..........................................................................................................2317.00721100000000210000
................................................................................................................................................GCCTTGTGAAGGGCTTA...........................................................1716.00600000000006000000
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTC............................................................2115.00531000000001000000
...............................................................................................................................................TGCCTTGTGAAGGGCTT............................................................1714.00400000000004000000
...........................................................................................AGTTTTTCATTTGGCGTGGCT............................................................................................................2113.00320000000010000000
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTTAC..........................................................2313.00300001100001000000
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTTAGC.........................................................2412.00220000000000000000
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTG............................................................2112.00210010000000000000
.................................................................................................................................................CCTTGTGAAGGGCTT............................................................1512.00200000000002000000
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCC.............................................................2012.00220000000000000000
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTTAAA.........................................................2412.00200000000100010000
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTA............................................................2112.00200000000002000000
.............................................................................................................................................GCTGCCTTGTGAAGGGCTT............................................................1912.00200010000001000000
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTTAG..........................................................2312.00200000000001100000
...........................................................................................AGTTTTTCATTTGGCGTGGCTAA..........................................................................................................2312.00200200000000000000
...........................................................................................AGTTTTTCATTTGGCGTG...............................................................................................................1812.00200001100000000000
...........................................................................................AGTTTTTCATTTGGCGTGGC.............................................................................................................2012.00200000100000100000
................................................................................................................................................GCCTTGTGAAGGGCTTT...........................................................1721.50300000000003000000
...........................................................................................................................................TAGCTGCCTTGTGAA..................................................................1511.00100000000001000000
...........................................................................................................................................TAGCTGCCTTGTGAAG.................................................................1611.00100000000001000000
...........................................................................................................................................TAGCTGCCTTGTGAAGGA...............................................................1811.00100000000001000000
...........................................................................................AGTTTTTCATTTGGCGT................................................................................................................1711.00100000000001000000
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCG.............................................................2011.00110000000000000000
...........................................................................................AGTTTTTCATTTGGCGTGGCTAGG.........................................................................................................2411.00100000000000100000
...............................................................................................................................................TGCCTTGTGAAGGGCTTT...........................................................1811.00100000000001000000
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTTG...........................................................2211.00100000000001000000
............................................................................................................................................AGCTGCCTTGTGAAGGGCTTA...........................................................2111.00100010000000000000
...................................................................................................................TC---ACTACTTTTTTAATATT...................................................................................1921.00200000200000000000
..............................................................................................................................................CTGCCTTGTGAAGGGCTT............................................................1811.00100000000001000000
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTTC...........................................................2211.00100010000000000000
...........................................................................................................................................TAGCTGCCTTGTGAAGG................................................................1711.00100000000001000000
.................................................................................................................................................CCTTGTGAAGGGCTTA...........................................................1611.00100000000001000000
.................................................................................................TCATTTGGCGTGGCTAGC.........................................................................................................1811.00110000000000000000
...........................................................................................................................................TAGCTGCCTTGTGAAGGGA..............................................................1911.00100010000000000000
............................................................................................................................................AGCTGCCTTGTGAAGGGC..............................................................1811.00100000100000000000
droSec2
AAT--T------------------------------------------TTC-CGCG---TGTG-A----AATACGAAGTTGATTGTATGTCAGTTTTTCATTTGGCGTGGCTAGCTC---ACTACTTTTTTAATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTAATTGCAGTTCAACTGCCAAA-TAATATAT-------------------TTTT-SizeHit CountTotal NormTotalM054

Female-body		V113

Male-body		V114

Embryo		V115

Head
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTT............................................................21124813.00248133526496110166949
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTTA...........................................................2212542.0025421473801722293
...........................................................................................AGTTTTTCATTTGGCGTGGCTAGC.........................................................................................................241982.009822738804113
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCT.............................................................201138.001382136846
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTTT...........................................................221120.001203145638
...........................................................................................................................................TAGCTGCCTTGTGAAGGG...............................................................18193.0093317811
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTTAT..........................................................23170.007033141310
...........................................................................................AGTTTTTCATTTGGCGTGGCTAG..........................................................................................................23154.005429385
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTTAA..........................................................23140.0040881410
...........................................................................................................................................TAGCTGCCTTGTGAAGGGC..............................................................19140.004002353
..........................................................................................................................................CTAGCTGCCTTGTGAAGGGCTT............................................................22127.002733156
............................................................................................................................................AGCTGCCTTGTGAAGGGCTT............................................................20126.002616172
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTTTT..........................................................23124.002412804
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTTAG..........................................................23124.002406108
...........................................................................................AGTTTTTCATTTGGCGTGGCT............................................................................................................21119.00190568
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTC............................................................21117.00170395
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTTATT.........................................................24114.00144505
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTTAC..........................................................23112.00122532
............................................................................................................................................AGCTGCCTTGTGAAGGGCTTA...........................................................21110.00107111
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTA............................................................2117.0070331
..........................................................................................................................................CTAGCTGCCTTGTGAAGGGCTTA...........................................................2316.0061140
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTTG...........................................................2216.0060321
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTTC...........................................................2215.0050212
...........................................................................................AGTTTTTCATTTGGCGTGGCTA...........................................................................................................2214.0040031
...........................................................................................AGTTTTTCATTTGGCGTGGCTAGCT........................................................................................................2514.0040040
............................................................................................GTTTTTCATTTGGCGTGGCTAGC.........................................................................................................2314.0043010
.............................................................................................................................................GCTGCCTTGTGAAGGGCTT............................................................1913.0030021
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTG............................................................2113.0031011
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTTTTT.........................................................2413.0031101
............................................................................................................................................AGCTGCCTTGTGAAGGGCT.............................................................1913.0033000
...........................................................................................AGTTTTTCATTTGGCGTGGC.............................................................................................................2013.0030030
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTTACT.........................................................2413.0030111
............................................................................................................................................AGCTGCCTTGTGAAGGGCTTT...........................................................2113.0032100
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTTAAA.........................................................2412.0020020
.............................................................................................TTTTTCATTTGGCGTGGCTAGC.........................................................................................................2212.0021100
...........................................................................................AGTTTTTCATTTGGCGTGGCTAGCA........................................................................................................2512.0020020
...........................................................................................AGTTTTTCATTTGGCGTGGCTAGT.........................................................................................................2412.0020011
.............................................................................................................................................GCTGCCTTGTGAAGGGCTTA...........................................................2012.0020020
...........................................................................................AGTTTTTCATTTGGCGTG...............................................................................................................1812.0020002
............................................................................................................................................AGCTGCCTTGTGAAGGGCTTTT..........................................................2212.0022000
..........................................................................................CAGTTTTTCATTTGGCGTGGCTAGC.........................................................................................................2512.0020020
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTTTA..........................................................2312.0020200
..............................................................................................................................................CTGCCTTGTGAAGGGCTT............................................................1811.0010100
............................................................................................................................................AGCTGCCTTGTGAAGGGCTTACG.........................................................2311.0010010
............................................................................................................................................AGCTGCCTTGTGAAGGGCTTTA..........................................................2211.0011000
...........................................................................................................................................TAGCTGCCTTGTGAAGGCT..............................................................1911.0010010
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCGG............................................................2111.0010001
............................................................................................................................................AGCTGCCTTGTGAAGGGCTTAT..........................................................2211.0011000
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTTAAAA........................................................2511.0010010
.............................................................................................................................................GCTGCCTTGTGAAGGGCTTAT..........................................................2111.0011000
..........................................................................................................................................CTAGCTGCCTTGTGAAGGGCTTAA..........................................................2411.0010010
...........................................................................................................................................TAGCTGCCTTGTGAAGGGT..............................................................1911.0010001
......................................................................................................................................ATTGCTAGCTGCCTTGTGAAGGGCTTA...........................................................2711.0010100
...........................................................................................AGTTTTTCATTTGGCGTGGCTT...........................................................................................................2211.0010001
.....................................................................................................................................TATTGCTAGCTGCCTTGTGAAGGGCTTA...........................................................2811.0010010
...........................................................................................AGTTTTTCATTTGGCGTGGCTGAT.........................................................................................................2411.0010010
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTTACA.........................................................2411.0010010
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCC.............................................................2011.0010001
...........................................................................................AGTTTTTCATTTGGCGTGGCTAGCTC---A...................................................................................................2711.0010010
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTTTTA.........................................................2411.0010001
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTTACG.........................................................2411.0010010
.........................................................................................................................................GCTAGCTGCCTTGTGAAGGGCTTA...........................................................2411.0010010
droYak3
GTT--TA----------------ATA--------AATT-AAT--GATTTCC-CGCG---TGTG-A----GATGTGAAGTTGATTGTATGTCAGTTTTTCATTTGGCGTGCCTAGCTT---AGCTTTTTTTAAATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTAATTGCAGTTCGACTCG-------------------------------------SizeHit CountTotal NormTotalM026

Head		M043

Female-body		M056

Embryo		V046

Embryo		V052

Head		V058

Head		V120

Male-body		SRR1275488

Male larvae		SRR1275486

Male prepupae		SRR1275484

Male prepupae		GSM1528802

follicle cells
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTT............................................................2119564.009564216082476631835395722330000
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTTA...........................................................2211136.001136116987771774501750000
...........................................................................................AGTTTTTCATTTGGCGTGCCTAGC.........................................................................................................241161.001610315060110000
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCT.............................................................201156.001561291010357010000
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTTT...........................................................221119.00119144711639110000
............................................................................................................................................AGCTGCCTTGTGAAGGGCTT............................................................20153.0053047003300000
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTTAG..........................................................23141.00410000122180000
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTTAT..........................................................23137.00370140021380000
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTTAA..........................................................23131.0031017103910000
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTC............................................................21130.0030002201430000
..........................................................................................................................................CTAGCTGCCTTGTGAAGGGCTT............................................................22123.002302671250000
...........................................................................................................................................TAGCTGCCTTGTGAAGGGC..............................................................19120.0020041301110000
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTTC...........................................................22118.0018011041020000
............................................................................................................................................AGCTGCCTTGTGAAGGGCTTA...........................................................21116.0016015100000000
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTTG...........................................................22116.001601003930000
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTTTT..........................................................23114.001403002720000
...........................................................................................................................................TAGCTGCCTTGTGAAGGG...............................................................18111.001100304220000
...........................................................................................AGTTTTTCATTTGGCGTGCCTAG..........................................................................................................2319.00904500000000
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTG............................................................2117.00700102310000
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTTAC..........................................................2317.00701210210000
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTTATT.........................................................2415.00500000230000
............................................................................................................................................AGCTGCCTTGTGAAGGGCTTT...........................................................2114.00404000000000
...........................................................................................AGTTTTTCATTTGGCGTGCCT............................................................................................................2113.00301020000000
.............................................................................................................................................GCTGCCTTGTGAAGGGCTT............................................................1913.00302000010000
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCC.............................................................2013.00300300000000
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTTAAA.........................................................2413.00300001110000
.............................................................................................TTTTTCATTTGGCGTGCCTAGC.........................................................................................................2213.00300300000000
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTA............................................................2113.00301010010000
...........................................................................................................................................TAGCTGCCTTGTGAAGGGT..............................................................1912.00201000100000
..........................................................................................CAGTTTTTCATTTGGCGTGCCTAGC.........................................................................................................2512.00200200000000
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTTTTT.........................................................2412.00200000020000
.............................................................................................................................................GCTGCCTTGTGAAGGGCTTT...........................................................2012.00202000000000
...................................................................................................................TT---AGCTTTTTTTAAATATTGC.................................................................................2112.00200200000000
..........................................................................................................................................CTAGCTGCCTTGTGAAGGGCT.............................................................2112.00202000000000
............................................................................................GTTTTTCATTTGGCGTGCCTAGC.........................................................................................................2312.00202000000000
...........................................................................................AGTTTTTCATTTGGCGTGCCTA...........................................................................................................2212.00201100000000
............................................................................................................................................AGCTGCCTTGTGAAGGGCTTTT..........................................................2211.00101000000000
..........................................................................................................................................CTAGCTGCCTTGTGAAGGGCTTA...........................................................2311.00100000100000
............................................................................................GTTTTTCATTTGGCGTGCCTAG..........................................................................................................2211.00101000000000
...........................................................................................................................................TAGCTGCCTTGTGAAGGGAA.............................................................2011.00100000100000
...........................................................................................................................................TAGCTGCCTTGTGAAGGGAC.............................................................2011.00100100000000
............................................................................................................................................AGCTGCCTTGTGAAGGGCT.............................................................1911.00101000000000
........................................................................................................................................TGCTAGCTGCCTTGTGAAGGGT..............................................................2211.00100000010000
..............................................................................................TTTTCATTTGGCGTGCCTAGC.........................................................................................................2111.00100100000000
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTTGA..........................................................2311.00100000100000
droEre2
AGT--TA----------------AAT--------AAAT-AA------TTCC-CGCG---TGTG-A----AATGTGAAGTTGATTGTATGTCAGTTTTTCATTTGGCGTGCCTAGCTT---ACCTCTTTTTAAATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTAATTGTAGTTCGACTGCAAAA-TTATATA-----------------------T-SizeHit CountTotal NormTotalM055

Female-body		M057

Embryo		V060

Head		V040

Embryo		V107

Male-body		V108

Head		GSM1528801

follicle cells
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTT............................................................21139978.0039978181925471154313217196630
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTTA...........................................................2213801.003801646566854123611920
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCT.............................................................201427.004271142715332020
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTTT...........................................................221267.00267101135166630
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTTAT..........................................................231152.0015260027044210
............................................................................................................................................AGCTGCCTTGTGAAGGGCTT............................................................201140.001408505116330
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTTAG..........................................................231107.001070021128570
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTTAA..........................................................231100.001005309017183
...........................................................................................AGTTTTTCATTTGGCGTGCCTAGC.........................................................................................................24190.00903326101290
...........................................................................................................................................TAGCTGCCTTGTGAAGGG...............................................................18145.004530007350
............................................................................................................................................AGCTGCCTTGTGAAGGGCTTA...........................................................21141.004136010310
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTTTT..........................................................23136.0036150301170
...........................................................................................................................................TAGCTGCCTTGTGAAGGGC..............................................................19135.003524403220
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTC............................................................21135.003501406240
..........................................................................................................................................CTAGCTGCCTTGTGAAGGGCTT............................................................22132.003270204190
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTTATT.........................................................24122.002250401120
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTG............................................................21119.001910050220
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTTG...........................................................22117.001710501100
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTA............................................................21112.00120041340
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTTC...........................................................22111.00111100540
............................................................................................................................................AGCTGCCTTGTGAAGGGCTTAT..........................................................2218.0088000000
............................................................................................................................................AGCTGCCTTGTGAAGGGCTTT...........................................................2118.0087000100
.............................................................................................................................................GCTGCCTTGTGAAGGGCTT............................................................1918.0080010250
...........................................................................................AGTTTTTCATTTGGCGTGCCTAG..........................................................................................................2317.0072100040
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTTAC..........................................................2317.0070010150
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTTAAA.........................................................2416.0060000420
..............................................................................................................................................CTGCCTTGTGAAGGGCTT............................................................1815.0050010400
...........................................................................................AGTTTTTCATTTGGCGTGCCT............................................................................................................2115.0051000040
..........................................................................................................................................CTAGCTGCCTTGTGAAGGGCTTA...........................................................2314.0043000010
............................................................................................................................................AGCTGCCTTGTGAAGGGCTTAA..........................................................2214.0044000000
............................................................................................................................................AGCTGCCTTGTGAAGGGCT.............................................................1914.0044000000
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTTTG..........................................................2313.0032010000
.............................................................................................................................................GCTGCCTTGTGAAGGGCTTA...........................................................2013.0031010010
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTTAAAA........................................................2513.0032000010
............................................................................................................................................AGCTGCCTTGTGAAGGGCTTTTT.........................................................2312.0022000000
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCC.............................................................2012.0020100100
...........................................................................................AGTTTTTCATTTGGCGTGCCTA...........................................................................................................2212.0020000020
...........................................................................................AGTTTTTCATTTGGCGTGCC.............................................................................................................2012.0020000020
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTTTTT.........................................................2412.0021000010
...........................................................................................................................................TAGCTGCCTTGTGAAGGGA..............................................................1912.0020000110
...........................................................................................................................................TAGCTGCCTTGTGAAGGGT..............................................................1912.0020000020
............................................................................................GTTTTTCATTTGGCGTGCCTAG..........................................................................................................2212.0022000000
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTTACT.........................................................2412.0021000100
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTTAAT.........................................................2412.0020010100
..........................................................................................................................................CTAGCTGCCTTGTGAAGGGCT.............................................................2111.0011000000
.............................................................................................TTTTTCATTTGGCGTGCCT............................................................................................................1911.0010000010
.........................................................................................................................................GCTAGCTGCCTTGTGAAGGGCTT............................................................2311.0011000000
...........................................................................................AGTTTTTCATTTGGCGTG...............................................................................................................1811.0011000000
............................................................................................................................................AGCTGCCTTGTGAAGGGCTTAG..........................................................2211.0011000000
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTTTTA.........................................................2411.0010000100
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTTTA..........................................................2311.0010000100
dp5
GAG--TG----------------ACA--------AATT-TCTGTGAATTCC-CGCC-----AC-A----AAAGAGAAACAAATTGAATGTGAGTCTCTCACATGGCTGGTCTAGCTG---ACTTGT-TTCTAATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTTTTTGTAGCCCAACGTAAAGC-CGAA-AA------TCGTAAAAT-----ATTT-SizeHit CountTotal NormTotalM022

Male-body		M040

Female-body		M059

Embryo		M062

Head		V043

Embryo		V051

Head		V112

Male-body		SRR902010

Ovary		SRR902011

Testis		SRR902012

CNS imaginal disc
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTT............................................................21110506.001050602346446050538093737050
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTTA...........................................................2211895.00189507132017877982172401
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCT.............................................................201532.0053203534641614000
...........................................................................................AGTCTCTCACATGGCTGGTCTAGC.........................................................................................................241466.004660235991131450000
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTTT...........................................................221253.0025301620316126000
............................................................................................................................................AGCTGCCTTGTGAAGGGCTT............................................................201193.001930180000112000
...........................................................................................AGTCTCTCACATGGCTGGTCTAG..........................................................................................................231184.00184017053320100
...........................................................................................AGTCTCTCACATGGCTGGTC.............................................................................................................201180.00180017712000000
...........................................................................................AGTCTCTCACATGGCTGGTCT............................................................................................................211126.00126212012010000
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTTAA..........................................................231110.00110093001132010
...........................................................................................................................................TAGCTGCCTTGTGAAGGGC..............................................................19186.0086166420121000
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTTAT..........................................................23175.0075061100103000
............................................................................................................................................AGCTGCCTTGTGAAGGGCTTA...........................................................21149.004904800001000
...........................................................................................................................................TAGCTGCCTTGTGAAGGG...............................................................18148.004804100160000
...........................................................................................AGTCTCTCACATGGCTGGTCTA...........................................................................................................22132.003212803000000
............................................................................................................................................AGCTGCCTTGTGAAGGGCT.............................................................19129.002902900000000
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTTTT..........................................................23129.002901900064000
...........................................................................................................................................TAGCTGCCTTGTGAAGGGT..............................................................19122.002201400035000
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTC............................................................21119.00190143164000
............................................................................................................................................AGCTGCCTTGTGAAGGGCTTT...........................................................21118.001801800000000
............................................................................................GTCTCTCACATGGCTGGTCTAGC.........................................................................................................23117.001701700000000
...........................................................................................AGTCTCTCACATGGCTGGTCTAGT.........................................................................................................24116.001601500100000
..........................................................................................................................................CTAGCTGCCTTGTGAAGGGCTT............................................................22115.00150511044000
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTTAC..........................................................23114.00140400082000
.............................................................................................................................................GCTGCCTTGTGAAGGGCTT............................................................19113.001301000210000
............................................................................................GTCTCTCACATGGCTGGTC.............................................................................................................19112.001201200000000
...........................................................................................AGTCTCTCACATGGCTGGT..............................................................................................................19111.001101100000000
............................................................................................GTCTCTCACATGGCTGGTCTAG..........................................................................................................22111.001101100000000
...........................................................................................AGTCTCTCACATGGCTGGTCTAGCT........................................................................................................2518.0080800000000
............................................................................................................................................AGCTGCCTTGTGAAGGGC..............................................................1818.0080800000000
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTTC...........................................................2218.0080100061000
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTTAG..........................................................2317.0070300022000
...........................................................................................AGTCTCTCACATGGCTGGTCTT...........................................................................................................2217.0070601000000
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTTATT.........................................................2416.0060400011000
...........................................................................................................................................TAGCTGCCTTGTGAAGGTT..............................................................1916.0060500010000
............................................................................................................................................AGCTGCCTTGTGAAGGGCTTAT..........................................................2216.0060600000000
...........................................................................................AGTCTCTCACATGGCTGGTCTAGCA........................................................................................................2516.0060500100000
............................................................................................GTCTCTCACATGGCTGGTCT............................................................................................................2016.0060600000000
...........................................................................................AGTCTCTCACATGGCTGG...............................................................................................................1815.0050500000000
............................................................................................................................................AGCTGCCTTGTGAAGGGCTTAA..........................................................2215.0050500000000
..........................................................................................................................................CTAGCTGCCTTGTGAAGGGCTTA...........................................................2315.0050110030000
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTTAAA.........................................................2414.0040100020001
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTTG...........................................................2213.0030200010000
..........................................................................................................................................CTAGCTGCCTTGTGAAGGGCT.............................................................2113.0030101001000
.............................................................................................................................................GCTGCCTTGTGAAGGGCTTA...........................................................2013.0030300000000
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTA............................................................2113.0030100011000
..........................................................................................................................................CTAGCTGCCTTGTGAAGGGCTTAT..........................................................2413.0030200001000
...........................................................................................AGTCTCTCACATGGCTGGTCC............................................................................................................2113.0030003000000
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTTTTT.........................................................2423.0060500010000
...........................................................................................AGTCTCTCACATGGCTGGTCTAT..........................................................................................................2313.0030300000000
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTTTAT.........................................................2412.0020200000000
...........................................................................................AGTCTCTCACATGGCTGGTCA............................................................................................................2112.0020200000000
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCC.............................................................2012.0020020000000
..............................................................................................CTCTCACATGGCTGGTCTAG..........................................................................................................2012.0020200000000
..........................................................................................................................................CTAGCTGCCTTGTGAAGGGC..............................................................2012.0020101000000
..............................................................................................................................................CTGCCTTGTGAAGGGCTT............................................................1812.0020200000000
............................................................................................................................................AGCTGCCTTGTGAAGGGCTTC...........................................................2112.0020110000000
............................................................................................GTCTCTCACATGGCTGGT..............................................................................................................1812.0020200000000
...........................................................................................................................................TAGCTGCCTTGTGAAGGGA..............................................................1912.0020200000000
............................................................................................................................................AGCTGCCTTGTGAAGGGCTTTT..........................................................2212.0020200000000
...........................................................................................AGTCTCTCACATGGCTGGTCTAGCTT---....................................................................................................2612.0020200000000
................................................................................................CTCACATGGCTGGTCTAGC.........................................................................................................1912.0020200000000
...............................................................................................................................................TGCCTTGTGAAGGGCTTAA..........................................................1911.0010100000000
............................................................................................GTCTCTCACATGGCTGGTCTTT..........................................................................................................2211.0010100000000
...........................................................................................AGTCTCTCACATGGCTGGTCTAGCC........................................................................................................2511.0010000010000
............................................................................................GTCTCTCACATGGCTGGTCTAGT.........................................................................................................2311.0010100000000
.............................................................................................................................................GCTGCCTTGTGAAGGGCTTAT..........................................................2111.0010100000000
............................................................................................GTCTCTCACATGGCTGGTCTA...........................................................................................................2111.0010100000000
...................................................................................................................TG---ACTTGT-TTCTAATATTGC.................................................................................2011.0010010000000
droPer2
GAG--TG----------------ACA--------AAGT-TCTGTGAATTCC-CGCC-----AC-A----AAAGAGAAACAAATTGTATGTGAGTCTCTCACATGGCTGGTCTAGCTG---ACTTGT-TTCTAATACTGCTAGCTGCCTTGTGAAGGGCTTACGTGTTTTTGTAGCCCAACGTAAAGC-CGAA-AA------TCGTAAAAT-----ATTT-SizeHit CountTotal NormTotalM021

Embryo		M042

Female-body		V042

Embryo		V050

Head		V057

Head		V111

Male-body
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTT............................................................21128972.0028972452017540701375210451
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTTA...........................................................2213275.0032752160207662063264
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCT.............................................................201785.00785346214456327
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTTT...........................................................221320.0032004904017655
............................................................................................................................................AGCTGCCTTGTGAAGGGCTT............................................................201119.00119035011685
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTTAA..........................................................23163.0063013012353
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTTAT..........................................................23155.0055010012312
...........................................................................................................................................TAGCTGCCTTGTGAAGGGC..............................................................19152.005211015341
...........................................................................................AGTCTCTCACATGGCTGGTCTAG..........................................................................................................23149.00490413140
...........................................................................................AGTCTCTCACATGGCTGGTCTAGC.........................................................................................................24146.00460359020
...........................................................................................................................................TAGCTGCCTTGTGAAGGG...............................................................18145.00450407277
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTTAG..........................................................23138.0038000101612
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTTC...........................................................22135.00350105290
..........................................................................................................................................CTAGCTGCCTTGTGAAGGGCTT............................................................22130.00300105177
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTC............................................................21128.00280004222
...........................................................................................AGTCTCTCACATGGCTGGTC.............................................................................................................20126.00260240020
............................................................................................................................................AGCTGCCTTGTGAAGGGCTTA...........................................................21123.00230140450
...........................................................................................AGTCTCTCACATGGCTGGTCT............................................................................................................21121.00215150010
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTTTT..........................................................23121.0021050493
...........................................................................................................................................TAGCTGCCTTGTGAAGGGT..............................................................19116.0016010249
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTG............................................................21115.00150002130
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTA............................................................21112.0012010191
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTTAC..........................................................23111.0011011261
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTTG...........................................................22110.0010000181
.............................................................................................................................................GCTGCCTTGTGAAGGGCTT............................................................1919.009020430
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTTAAA.........................................................2418.008010160
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTTATT.........................................................2417.007010060
............................................................................................................................................AGCTGCCTTGTGAAGGGCTTT...........................................................2116.006030120
...........................................................................................................................................TAGCTGCCTTGTGAAGGGA..............................................................1915.005000014
..............................................................................................................................................CTGCCTTGTGAAGGGCTT............................................................1814.004010021
...........................................................................................................................................TAGCTGCCTTGTGAAGGT...............................................................1814.004000040
...........................................................................................AGTCTCTCACATGGCTGGTCTA...........................................................................................................2214.004040000
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCA.............................................................2013.003000030
............................................................................................GTCTCTCACATGGCTGGTCTAG..........................................................................................................2213.003030000
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTTTG..........................................................2313.003000111
............................................................................................................................................AGCTGCCTTGTGAAGGGCT.............................................................1913.003020010
..........................................................................................................................................CTAGCTGCCTTGTGAAGGGCTTA...........................................................2312.002000110
...................................................................................................................TG---ACTTGT-TTCTAATACTGC.................................................................................2012.002020000
droWil2
AA-------------------------------------------------------------------------------ATTGTGTGTGAGTCTTTCACTGGGCGTGCTTAGCTAGAAATTTA-TTTACCATATTGCTAGCTGCCTTGTGAAGTGCTTACGTGTAATTG-------------------------------------------------SizeHit CountTotal NormTotalM020

Head		M045

Female-body		V117

Male-body		V118

Embryo		V119

Head
...........................................................................................................................................TAGCTGCCTTGTGAAGTGCTTA...........................................................2217660.00766064617135543937
...........................................................................................................................................TAGCTGCCTTGTGAAGTGCTT............................................................2115689.00568916784143319961460
...........................................................................................AGTCTTTCACTGGGCGTGCTTAGC.........................................................................................................241880.0088006377596
...........................................................................................................................................TAGCTGCCTTGTGAAGTGCTTT...........................................................221232.00232179456245
...........................................................................................AGTCTTTCACTGGGCGTGCTTAGCT........................................................................................................251131.0013104210916
..........................................................................................................................................CTAGCTGCCTTGTGAAGTGCTT............................................................221126.00126013207221
.............................................................................................TCTTTCACTGGGCGTGCTTAGCT........................................................................................................231119.001192118530
...........................................................................................................................................TAGCTGCCTTGTGAAGTGCT.............................................................20196.0096326271327
...........................................................................................................................................TAGCTGCCTTGTGAAGTGCTTAA..........................................................23193.009308205411
...........................................................................................AGTCTTTCACTGGGCGTGCTTAG..........................................................................................................23177.00770121595
..........................................................................................................................................CTAGCTGCCTTGTGAAGTGCTTA...........................................................23170.0070051622
............................................................................................................................................AGCTGCCTTGTGAAGTGCTT............................................................20159.0059056111
.............................................................................................TCTTTCACTGGGCGTGCTTAG..........................................................................................................21141.0041522437
...........................................................................................................................................TAGCTGCCTTGTGAAGTGC..............................................................19136.00360601614
............................................................................................................................................AGCTGCCTTGTGAAGTGCTTA...........................................................21134.0034028060
...........................................................................................................................................TAGCTGCCTTGTGAAGTGCTTAT..........................................................23129.0029012845
...........................................................................................AGTCTTTCACTGGGCGTGCTT............................................................................................................21118.001805445
.............................................................................................TCTTTCACTGGGCGTGCTT............................................................................................................19118.0018052110
..........................................................................................................................................CTAGCTGCCTTGTGAAGTGCT.............................................................21115.0015002103
...........................................................................................................................................TAGCTGCCTTGTGAAGTGCTTAAA.........................................................24115.001504182
...........................................................................................AGTCTTTCACTGGGCGTGCTTA...........................................................................................................22114.001404190
...........................................................................................................................................TAGCTGCCTTGTGAAGTGCTTTT..........................................................23114.001403623
..........................................................................................................................................CTAGCTGCCTTGTGAAGTGC..............................................................20113.001301075
...................................................................................................................TAGAAATTTA-TTTACCATATTGC.................................................................................23113.0013010120
...........................................................................................................................................TAGCTGCCTTGTGAAGTGCTTAG..........................................................23111.001102423
..........................................................................................................................................CTAGCTGCCTTGTGAAGTGCTTT...........................................................23110.001003160
.............................................................................................TCTTTCACTGGGCGTGCTTAGCTA.......................................................................................................2419.00903060
...........................................................................................AGTCTTTCACTGGGCGTGCTTAGA.........................................................................................................2418.00800062
.............................................................................................TCTTTCACTGGGCGTGCTTAGC.........................................................................................................2218.00802051
...........................................................................................................................................TAGCTGCCTTGTGAAGTGCTTC...........................................................2217.00703130
.........................................................................................................................................GCTAGCTGCCTTGTGAAGTGCT.............................................................2216.00600042
...........................................................................................................................................TAGCTGCCTTGTGAAGTG...............................................................1816.00602040
.............................................................................................................................................GCTGCCTTGTGAAGTGCTTA...........................................................2016.00601221
...........................................................................................................................................TAGCTGCCTTGTGAAGTGCTTG...........................................................2216.00601221
...........................................................................................................................................TAGCTGCCTTGTGAAGTGCTC............................................................2115.00502102
...........................................................................................................................................TAGCTGCCTTGTGAAGTGCTA............................................................2115.00501121
........................................................................................................................................TGCTAGCTGCCTTGTGAAGTGCT.............................................................2314.00400103
....................................................................................................................................ATATTGCTAGCTGCCTTGTGAAGTGCT.............................................................2714.00400040
..............................................................................................................................................CTGCCTTGTGAAGTGCTT............................................................1814.00403010
.............................................................................................................................................GCTGCCTTGTGAAGTGCTT............................................................1914.00402011
.........................................................................................................................................GCTAGCTGCCTTGTGAAGTGCTT............................................................2314.00400040
...........................................................................................AGTCTTTCACTGGGCGTGCTTT...........................................................................................................2214.00402002
............................................................................................GTCTTTCACTGGGCGTGCTTAGC.........................................................................................................2313.00301020
..............................................................................................................................................CTGCCTTGTGAAGTGCTTA...........................................................1913.00303000
...........................................................................................AGTCTTTCACTGGGCGTGCTAGC..........................................................................................................2313.00300030
............................................................................................................................................AGCTGCCTTGTGAAGTGCTTT...........................................................2113.00303000
.............................................................................................TCTTTCACTGGGCGTGCTTA...........................................................................................................2013.00301101
...........................................................................................................................................TAGCTGCCTTGTGAAGTGCTG............................................................2112.00200200
...........................................................................................................................................TAGCTGCCTTGTGAAGTGCTTAC..........................................................2312.00200020
...........................................................................................AGTCTTTCACTGGGCGTGCTTAGCA........................................................................................................2512.00200020
............................................................................................................................................AGCTGCCTTGTGAAGTGC..............................................................1812.00202000
.............................................................................................TCTTTCACTGGGCGTGCTTAGCTAG......................................................................................................2512.00201001
............................................................................................................................................AGCTGCCTTGTGAAGTGCTTAA..........................................................2212.00202000
.......................................................................................................................................TTGCTAGCTGCCTTGTGAAGTGCTT............................................................2512.00200020
.........................................................................................TGAGTCTTTCACTGGGCGTGCTT............................................................................................................2312.00202000
............................................................................................................................................AGCTGCCTTGTGAAGTGCT.............................................................1912.00202000
...........................................................................................AGTCTTTCACTGGGCGTGCTTAGCTAG......................................................................................................2712.00200020
...........................................................................................AGTCTTTCACTGGGCGTGC..............................................................................................................1912.00200020
........................................................................................................................ATTTA-TTTACCATATTGC.................................................................................1811.00101000
...........................................................................................AGTCTTTCACTGGGCGTGCTTTT..........................................................................................................2311.00101000
..........................................................................................................................................CTAGCTGCCTTGTGAAGTGCTTG...........................................................2311.00101000
...........................................................................................................................................TAGCTGCCTTGTGAAGTGCTTATT.........................................................2411.00100001
...........................................................................................AGTCTTTCACTGGGCGTGCTTAGCC........................................................................................................2511.00100001
............................................................................................GTCTTTCACTGGGCGTGCTTAGCT........................................................................................................2411.00101000
...........................................................................................AGTCTTTCACTGGGCGTGCTTAT..........................................................................................................2311.00100010
.........................................................................................................................TTTA-TTTACCATATTGCTAGCTG...........................................................................2311.00110000
......................................................................................................................................ATTGCTAGCTGCCTTGTGAAGTGCT.............................................................2511.00100010
...........................................................................................................................................TAGCTGCCTTGTGAAGTGCTTAAT.........................................................2411.00100010
........................................................................................................................................TGCTAGCTGCCTTGTGAAG.................................................................1911.00100001
...........................................................................................................................................TAGCTGCCTTGTGAAGTGCTTATA.........................................................2411.00100100
.........................................................................................TGAGTCTTTCACTGGGCGTGCT.............................................................................................................2211.00100010
...........................................................................................AGTCTTTCACTGGGCGTGCTTAGT.........................................................................................................2411.00100010
............................................................................................................................................AGCTGCCTTGTGAAGTGCTTAT..........................................................2221.00202000
.............................................................................................TCTTTCACTGGGCGTGCTTAGA.........................................................................................................2211.00100100
..............................................................................................CTTTCACTGGGCGTGCTTAGCT........................................................................................................2211.00100010
..............................................................................................CTTTCACTGGGCGTGCTTAGCTA.......................................................................................................2311.00101000
......................................................................................................................................ATTGCTAGCTGCCTTGTGAAGTGCTT............................................................2611.00100100
...........................................................................................AGTCTTTCACTGGGCGTGCTTAA..........................................................................................................2311.00101000
...............................................................................................TTTCACTGGGCGTGCTTAGC.........................................................................................................2011.00100010
.............................................................................................................................................GCTGCCTTGTGAAGTGCTTT...........................................................2011.00101000
...........................................................................................................................................TAGCTGCCTTGTGAAGTGCC.............................................................2011.00100001
.............................................................................................TCTTTCACTGGGCGTGCTTT...........................................................................................................2011.00101000
............................................................................................................................................AGCTGCCTTGTGAAGTGCTTC...........................................................2111.00101000
........................................................................................................................................TGCTAGCTGCCTTGTGAAGTG...............................................................2111.00100001
.............................................................................................TCTTTCACTGGGCGTGCTTAA..........................................................................................................2111.00100100
droVir3
TGC--TT----------------AAA--------AGAC-GCTGGGCTATAAAA------TTTGGACCAAATGTGAGAGCGCATTGCATGTGAGTCCCTCATTTGGCAGGTTTAGCTG---CTTTT-AATACGATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTGATTGTTAAACAACTTAAACA-ACAAA--TAA--------------------A-SizeHit CountTotal NormTotalM027

Male-body		M028

Head		M047

Female-body		M061

Embryo		SRR060654

Ovary		SRR060655

Testis		SRR060656

Ovary		SRR060657

Testis		SRR060658

Ovary		SRR060659

Testis		SRR060660

Ovary		SRR060661

Embryo		SRR060662

Embryo		SRR060663

Embryo		SRR060664

Male-body		SRR060665

Female-body		SRR060666

Male-body		SRR060667

Female-body		SRR060668

Male-body		SRR060669

Female-body		SRR060670

Testis		SRR060671

Male-body		SRR060672

Female-body		SRR060673

Ovary		SRR060674

Ovary		SRR060675

Ovary		SRR060676

Ovary		SRR060677

Ovary		SRR060678

Testis		SRR060679

Testis		SRR060680

Testis		SRR060681

Testis		SRR060682

Embryo		SRR060683

Testis		SRR060684

Embryo		SRR060685

Embryo		SRR060686

Embryo		SRR060687

Embryo		SRR060688

Ovary		SRR060689

Testis		SRR1106712

embryo_0-2h		SRR1106713

embryo_0-2h		SRR1106714

embryo_2-4h		SRR1106715

embryo_4-6h		SRR1106716

embryo_4-6h		SRR1106717

embryo_6-8h		SRR1106718

embryo_6-8h		SRR1106719

embryo_8-10h		SRR1106720

embryo_8-10h		SRR1106721

embryo_10-12h		SRR1106722

embryo_10-12h		SRR1106723

embryo_12-14h		SRR1106724

embryo_12-14h		SRR1106725

embryo_14-16h		SRR1106726

embryo_14-16h		SRR1106727

larvae		SRR1106728

larvae		SRR1106729

mixed whole adult body		SRR1106730

embryo_16-30h		V047

Embryo		V053

Head		V116

Male-body		GSM1528803

follicle cells		SRR2096013

Ovary_Strain_9_oxidized		SRR2096014

Ovary_Strain_160_oxidized		SRR2096026

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096038

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096050

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096055

Ovary_Min_43		SRR2096056

Ovary_Min_46		SRR2096057

Ovary_Min_50		SRR2096058

Ovary_Min_98		SRR2096059

Ovary_Min_164		SRR2096060

Ovary_Min_193		SRR2096061

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096072

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096079

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096080

embryo_0-2h from 15to16 day old nondysgenic mothers		SRR2096081

embryo_0-2h from 15to16 day old nondysgenic mothers
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTT............................................................21129096.00290961428916433121257833121249492510480001023108048612171033714367130722967187074222223139449634130943076132814150000000022412102008450345334330080007119791100000
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTTA...........................................................22115065.0015065261921752271932262713000142516133248031226103012314022470233659522824924166510067402322534774560000000000000000000152771730147400000001200000
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTTT...........................................................2211272.001272002706201921640007810240127797313111217254122519135212660260100935000000000000000100001310061800000000000000
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTTAT..........................................................231578.005780016057100000004858947413914693143611918296340200002140000000000000000000013041100000000000000
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCT.............................................................201515.005151241214251410912130001522164124111019552901646150503000001544000000000000100000001200000000000000000
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTTAA..........................................................231416.004160029013300100002349103429270376942388313318040000090000000000000000000024081200000000000000
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTTC...........................................................221172.00172106025000200007414147421820000180100800001130000000000000000000014200000000000000000
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTTTT..........................................................231131.0013100100220000000710721109282631001113303001011000000000000000000001105000000000000000
............................................................................................................................................AGCTGCCTTGTGAAGGGCTT............................................................20191.009100800000000000010121000000000010000000001000000000000000000002200000000000000000
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTTAG..........................................................23190.0090001002153230005622321442001103030200002600000000000000000000111000300000000000000
...........................................................................................................................................TAGCTGCCTTGTGAAGGGC..............................................................19182.008221600220132000712243114660001000004000015000000000000000000104000000000100000000
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTTAAA.........................................................24174.0074001000000000009421075041300021311312001002000000000000000000001001000000000000000
...........................................................................................AGTCCCTCATTTGGCAGGTTTAGC.........................................................................................................24172.007220158000000000032161001700011431001000001000000000100001100114200000000010200000
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTTG...........................................................22158.00580110001012100023242124311213010006000001000000000000000000014700000000000000000
..........................................................................................................................................CTAGCTGCCTTGTGAAGGGCTT............................................................22156.00560061010300100014311605511021010300000000000000000000000000003600000000000000000
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTTATT.........................................................24152.00520010100000000061181505800112430300000000000000000000000000000001000000000000000
...........................................................................................................................................TAGCTGCCTTGTGAAGGG...............................................................18146.00460000052200400035133010120000000006000026000000000000000000000000000000000000000
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTC............................................................21143.00434002042200100003002031200010010001000011000000000000000000014700000000000000000
...........................................................................................AGTCCCTCATTTGGCAGGTTTAG..........................................................................................................23134.00340050110000000012050010500011101200000001000000000000000000015000000000000000000
..........................................................................................................................................CTAGCTGCCTTGTGAAGGGCTTA...........................................................23127.00270000000000000022113204601001000300000000000000000000000000001000000000000000000
............................................................................................................................................AGCTGCCTTGTGAAGGGCTTA...........................................................21122.002200120000000000003001000100010010100000000000000000000000000001100000000000000000
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTTAC..........................................................23122.00220010010000000022100203600001010000000001000000000000000000001000000000000000000
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTA............................................................21121.00210000020200100006001020200000010000000000000000000000000000003100000000000000000
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTTTA..........................................................23114.00140000000000000012000002600100000000000001000000000000000000000100000000000000000
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTTTTT.........................................................24112.00120000000000000001031201200000010100000000000000000000000000000000000000000000000
...............................................................................................................................................TGCCTTGTGAAGGGCTTA...........................................................18111.00110010001000000002120101010000010000000000000000000000000000000000000000000000000
..............................................................................................................................................CTGCCTTGTGAAGGGCTT............................................................18111.00110030030001300000001000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTTATC.........................................................24111.00110010000000000020000000000000020400000002000000000000000000000000000000000000000
.............................................................................................................................................GCTGCCTTGTGAAGGGCTT............................................................19110.00100040000000100000000000110000000000000010000000000000000000002000000000000000000
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTTAAAA........................................................2518.0080000000000000001000000110100011101000000000000000000000000000000000000000000000
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTTTG..........................................................2318.0080000000100000000000000210000010101000001000000000000000000000000000000000000000
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTTATCC........................................................2517.0070000000000000000000000000000010100000001000000000000000000000400000000000000000
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTTACC.........................................................2417.0071010000000000000000000000000000000000000000000000000000000000500000000000000000
...........................................................................................AGTCCCTCATTTGGCAGGTTTAGCC........................................................................................................2517.0070012000000000000000000000000000000000000000000000000020000020000000000000000000
.............................................................................................................................................GCTGCCTTGTGAAGGGCTTA...........................................................2016.0060030000000000000000002000000010000000000000000000000000000000000000000000000000
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTTAAT.........................................................2416.0060000000000000001001001200000000100000000000000000000000000000000000000000000000
...........................................................................................AGTCCCTCATTTGGCAGGTTTA...........................................................................................................2216.0060020000000000011000000100000000100000000000000000000000000000000000000000000000
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTTCT..........................................................2316.0060000000001000000010010100000001000000000000000000000000000000100000000000000000
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTG............................................................2125.00100010000200000002000020100000000000000000000000000000000000002000000000000000000
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTTATA.........................................................2415.0050000000000000000011001000000000001000001000000000000000000000000000000000000000
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCC.............................................................2015.0051210000001000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................AGTCCCTCATTTGGCAGGTTT............................................................................................................2114.0040010000000000000010000000000000100000000000000000000000000001000000000000000000
...........................................................................................................................................TAGCTGCCTTGTGAAGGGA..............................................................1914.0040000000100000000000100000000000000000000000000000000000000000200000000000000000
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTTTGT.........................................................2414.0040000000000000000010000000000000000000000000000000000000000000000300000000000000
..............................................................................................................................................CTGCCTTGTGAAGGGCTTA...........................................................1913.0030000010000000001000000000100000000000000000000000000000000000000000000000000000
..........................................................................................................................................CTAGCTGCCTTGTGAAGGGCTTT...........................................................2313.0030000000000000000010101000000000000000000000000000000000000000000000000000000000
............................................................................................................................................AGCTGCCTTGTGAAGGGCT.............................................................1913.0030030000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................TAGCTGCCTTGTGAAGG................................................................1713.0030000000000000000000000000000000000000000000000000000000300000000000000000000000
............................................................................................................................................AGCTGCCTTGTGAAGGGCTTAA..........................................................2212.0020020000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................AGCTGCCTTGTGAAGGGCTTC...........................................................2112.0020020000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................TAGCTGCCTTGTGAAGGGT..............................................................1912.0020000000000000000000000000000010000000000000000000000000000000100000000000000000
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTTTAA.........................................................2412.0020000000000000000000000100000000000000000000000000000000000001000000000000000000
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTTCA..........................................................2312.0020000000000000000000001010000000000000000000000000000000000000000000000000000000
..........................................................................................................................................CTAGCTGCCTTGTGAAGGGCT.............................................................2112.0020000000000000000000000200000000000000000000000000000000000000000000000000000000
............................................................................................................................................AGCTGCCTTGTGAAGGGCTTT...........................................................2112.0020020000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTAT...........................................................2212.0020000000000000002000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTCC...........................................................2221.5030000000000000000000030000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................GCTGCCTTGTGAAGGGCTTAAAA........................................................2311.0010000000000000000001000000000000000000000000000000000000000000000000000000000000
droMoj3
AGT--GC----------------AAT--------AAGT-GTTTAAGTTATT------------------TATATGAACCGCATTGCATGTGAGTCCCTCATTTGGTGCGCTTAGCTG---TTTTTCAATTTGATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTGTTTGTAATACAAC----------------------------------------SizeHit CountTotal NormTotalM046

Female-body		V041

Embryo		V049

Head		V056

Head		M060

Embryo		V110

Male-body
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTT............................................................21122356.00223561310849468069094508158
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTTA...........................................................2212645.002645317131627967262341
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCT.............................................................201591.0059116351562142330
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTTC...........................................................221272.002728514650387
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTC............................................................211215.0021524027483779
..........................................................................................................................................CTAGCTGCCTTGTGAAGGGCTT............................................................221192.00192155518254237
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTTT...........................................................221139.001394233027532
...........................................................................................AGTCCCTCATTTGGTGCGCTTAGC.........................................................................................................241135.00135916011090
............................................................................................................................................AGCTGCCTTGTGAAGGGCTT............................................................20185.008562121055
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTTAG..........................................................23181.0081542123127
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTTAA..........................................................23175.00754924938
...........................................................................................................................................TAGCTGCCTTGTGAAGGGC..............................................................19159.0059170122073
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTTAT..........................................................23156.00562617949
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTTG...........................................................22147.0047511515011
...........................................................................................................................................TAGCTGCCTTGTGAAGGG...............................................................18143.004380112103
............................................................................................................................................AGCTGCCTTGTGAAGGGCTTA...........................................................21125.00252300200
..........................................................................................................................................CTAGCTGCCTTGTGAAGGGCT.............................................................21123.00231251122
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTA............................................................21121.00210051105
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTTATC.........................................................24118.0018804501
.............................................................................................................................................GCTGCCTTGTGAAGGGCTT............................................................19113.0013502420
............................................................................................................................................AGCTGCCTTGTGAAGGGCT.............................................................19113.00131300000
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTG............................................................21111.0011004304
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTTATCC........................................................25111.0011701201
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTTAC..........................................................2319.009103311
............................................................................................GTCCCTCATTTGGTGCGCTTAGCT........................................................................................................2419.009140130
............................................................................................................................................AGCTGCCTTGTGAAGGGCTTC...........................................................2119.009900000
..........................................................................................................................................CTAGCTGCCTTGTGAAGGGCTTA...........................................................2318.008111050
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTTTTC.........................................................2418.008201104
...........................................................................................AGTCCCTCATTTGGTGCGCTTAG..........................................................................................................2317.007420010
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTCT...........................................................2217.007500200
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTTCT..........................................................2315.005201101
............................................................................................................................................AGCTGCCTTGTGAAGGGCTTAT..........................................................2215.005500000
..............................................................................................................................................CTGCCTTGTGAAGGGCTT............................................................1815.005410000
...........................................................................................AGTCCCTCATTTGGTGCGCTTAGCT........................................................................................................2514.004010030
..........................................................................................................................................CTAGCTGCCTTGTGAAGGGCTC............................................................2214.004001030
...........................................................................................................................................TAGCTGCCTTGTGAAGGGA..............................................................1914.004000202
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCC.............................................................2014.004100030
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTTATT.........................................................2414.004101011
.............................................................................................................................................GCTGCCTTGTGAAGGGCTTA...........................................................2014.004210010
..........................................................................................................................................CTAGCTGCCTTGTGAAGGGCTTT...........................................................2313.003000030
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTTAAA.........................................................2413.003000201
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTTTA..........................................................2313.003001101
............................................................................................GTCCCTCATTTGGTGCGCTTAGC.........................................................................................................2313.003200010
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTTCG..........................................................2313.003003000
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTTTT..........................................................2313.003000201
............................................................................................................................................AGCTGCCTTGTGAAGGGCTTT...........................................................2113.003300000
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTTTG..........................................................2313.003001200
..............................................................................................................................................CTGCCTTGTGAAGGGCTTA...........................................................1913.003100020
...........................................................................................AGTCCCTCATTTGGTGCGCTTAGCC........................................................................................................2513.003100020
............................................................................................................................................AGCTGCCTTGTGAAGGGCTTG...........................................................2112.002200000
............................................................................................................................................AGCTGCCTTGTGAAGGGCTTAA..........................................................2212.002200000
..........................................................................................................................................CTAGCTGCCTTGTGAAGGGCTTC...........................................................2312.002200000
.............................................................................................................................................GCTGCCTTGTGAAGGGCTC............................................................1912.002100010
............................................................................................................................................AGCTGCCTTGTGAAGGGCTTATCC........................................................2412.002200000
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTTACT.........................................................2412.002001100
.............................................................................................TCCCTCATTTGGTGCGCTTAGCC........................................................................................................2312.002000020
............................................................................................................................................AGCTGCCTTGTGAAGGGCTC............................................................2012.002200000
............................................................................................................................................AGCTGCCTTGTGAAGGGCTTAG..........................................................2212.002200000
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTTATTC........................................................2512.002100001
...............................................................................................................................................TGCCTTGTGAAGGGCTTC...........................................................1812.002200000
........................................................................................................................................TGCTAGCTGCCTTGTGAAGGGC..............................................................2212.002000011
..........................................................................................................................................CTAGCTGCCTTGTGAAGGGC..............................................................2012.002001001
.............................................................................................TCCCTCATTTGGTGCGCTTAGC.........................................................................................................2212.002000020
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTTCA..........................................................2311.001001000
droGri2
TGA--TT----------------A------------------------------------------------TGAGAGCGCATTACATGTGAGTCCCTCATTTGGCGGACTTAGCTG---CTTTTCAATTTGATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTGATTGTAAATCAACT---------------------------------------SizeHit CountTotal NormTotalM041

Female-body		V109

Male-body
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTT............................................................2111923.0019231671756
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTTA...........................................................221202.0020289113
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCT.............................................................20127.0027252
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTTT...........................................................22118.0018117
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTTAT..........................................................23116.0016133
............................................................................................................................................AGCTGCCTTGTGAAGGGCTT............................................................20111.0011101
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTTAA..........................................................2319.00945
...........................................................................................AGTCCCTCATTTGGCGGACTTAGC.........................................................................................................2416.00660
...........................................................................................................................................TAGCTGCCTTGTGAAGGGC..............................................................1915.00550
............................................................................................................................................AGCTGCCTTGTGAAGGGCTTA...........................................................2114.00440
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTTAG..........................................................2314.00404
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTTTT..........................................................2313.00303
..........................................................................................................................................CTAGCTGCCTTGTGAAGGGCTT............................................................2213.00312
...........................................................................................................................................TAGCTGCCTTGTGAAGGG...............................................................1812.00220
............................................................................................................................................AGCTGCCTTGTGAAGGGC..............................................................1812.00220
............................................................................................................................................AGCTGCCTTGTGAAGGGCTTT...........................................................2112.00220
...........................................................................................AGTCCCTCATTTGGCGGACTTAGGC........................................................................................................2511.00110
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTG............................................................2111.00101
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTA............................................................2111.00101
...........................................................................................AGTCCCTCATTTGGCGGACTTAG..........................................................................................................2311.00110
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTTAC..........................................................2311.00110
............................................................................................................................................AGCTGCCTTGTGAAGGGCTTAT..........................................................2211.00110
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTC............................................................2111.00101
...........................................................................................AGTCCCTCATTTGGCGGAC..............................................................................................................1911.00110
.............................................................................................................................................GCTGCCTTGTGAAGGGCTT............................................................1911.00110
........................................................................................................................................................AAGGGCTTACGTGTGATTGT................................................2011.00110
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTTCG..........................................................2311.00110
............................................................................................................................................AGCTGCCTTGTGAAGGGCT.............................................................1911.00110
..........................................................................................................................................CTAGCTGCCTTGTGAAGGGCTTA...........................................................2311.00110
...........................................................................................................................................TAGCTGCCTTGTGAAGGGCTTG...........................................................2211.00110

Generated: 10/20/2015 at 07:35 PM