ID:

dan_13

 Coordinate:

scaffold_13266:1670207-1670268 -

 Confidence:

Known Ortholog

 Class:

Canonical miRNA

 Genomic Locale:

intron

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-25.3 -25.2 -25.2

Flybase annnotation

intron [Dana\GF12358-in]

No Repeatable elements found

Sense Strand Reads

TTTGTGAAAAGCCTTCTTTGGTTTCCTGAGGATACGTCCAAAATGACTCATCTCGAATAGCGTTGTGACTGATGGTATTTAAATATAAATCCGAGACAATGCTATTCTTGTAAAGTCATCTTGACCAAGCAACTTTTTCTAATCGATTCTTAATAGTGTCGG

***********************************(((.((.((((((......((((((((((((....(((.((((....))))..)))....))))))))))))......)))))).)))))..*********************************** 		Read size # Mismatch Hit Count Total Norm Total M044

female body

 V105

male body		 V106

head

 V055

head

 M058

embryo

 V039

embryo
..................................................TCTCGAATAGCGTTGTGACTGA.......................................................................................... 22 0 1 17144.00 17144 13149 1877 1213 781 100 24
..................................................TCTCGAATAGCGTTGTGACTG........................................................................................... 21 0 1 9941.00 9941 6494 2041 775 619 8 4
..................................................TCTCGAATAGCGTTGTGACT............................................................................................ 20 0 1 1921.00 1921 1283 416 131 81 8 2
...................................................CTCGAATAGCGTTGTGACTGA.......................................................................................... 21 0 1 1269.00 1269 1240 8 15 6 0 0
...................................................CTCGAATAGCGTTGTGACTG........................................................................................... 20 0 1 605.00 605 582 11 10 2 0 0
..................................................TCTCGAATGGCGTTGTGACTGA.......................................................................................... 22 1 1 437.00 437 433 3 0 1 0 0
..................................................TCTCGAATAGCGTTGTGACTGAT......................................................................................... 23 0 1 328.00 328 240 40 25 17 6 0
..................................................TCTCGAATAGCGTTGTGA.............................................................................................. 18 0 1 287.00 287 114 26 49 98 0 0
..................................................TCTCGAATGGCGTTGTGACTG........................................................................................... 21 1 1 273.00 273 270 2 0 1 0 0
..................................................TCTCGAATAGCGTTGTGAC............................................................................................. 19 0 1 260.00 260 175 35 6 29 13 2
..................................................TCTCGAATAGCGTTGTGACTGATGG....................................................................................... 25 0 1 177.00 177 65 46 57 9 0 0
..................................................TCTCGAATAGCGTTGTGACTGT.......................................................................................... 22 1 1 153.00 153 97 19 25 12 0 0
..................................................TCTCGAATCGCGTTGTGACTGA.......................................................................................... 22 1 1 105.00 105 101 1 1 1 1 0
...................................................CTCGAATAGCGTTGTGACT............................................................................................ 19 0 1 96.00 96 96 0 0 0 0 0
..................................................TCTCGAATAGCGTTGTGT.............................................................................................. 18 1 1 95.00 95 36 0 26 33 0 0
..................................................TCTCGAATTGCGTTGTGACTGA.......................................................................................... 22 1 1 89.00 89 89 0 0 0 0 0
....................................................TCGAATAGCGTTGTGACTGA.......................................................................................... 20 0 1 75.00 75 73 0 0 2 0 0
..................................................TCTCGAATAGCGTTGTGTT............................................................................................. 19 2 1 71.00 71 42 13 13 3 0 0
..................................................TCTCGAATAGCGTTGTGACTGAA......................................................................................... 23 1 1 68.00 68 41 10 10 7 0 0
..................................................TCTCGAATAGCGTTGTGACTGATGGTA..................................................................................... 27 0 1 67.00 67 10 20 36 1 0 0
..................................................TCTCGAATTGCGTTGTGACTG........................................................................................... 21 1 1 64.00 64 62 1 0 1 0 0
..................................................TCTCGAATAGCGTTGTGACTT........................................................................................... 21 1 1 62.00 62 23 25 12 2 0 0
..................................................TCTCGAATAGCGTTGTGACTGATG........................................................................................ 24 0 1 60.00 60 19 18 15 7 0 1
..................................................TCTCGAATAGCGTTGTGACTGG.......................................................................................... 22 1 1 59.00 59 52 3 2 1 0 1
..................................................TCTCGAATCGCGTTGTGACTG........................................................................................... 21 1 1 57.00 57 54 1 2 0 0 0
..................................................TCTCGAATATCGTTGTGACTG........................................................................................... 21 1 1 50.00 50 6 27 16 1 0 0
....................................................TCGAATAGCGTTGTGACTG........................................................................................... 19 0 1 49.00 49 42 6 0 1 0 0
..................................................TCTCGAATATCGTTGTGACTGA.......................................................................................... 22 1 1 46.00 46 5 26 14 0 0 1
..................................................TCTCGAATAGCGTTGTGACTGATGGT...................................................................................... 26 0 1 46.00 46 4 17 24 1 0 0
..................................................GCTCGAATAGCGTTGTGACTGA.......................................................................................... 22 1 1 35.00 35 31 1 0 3 0 0
..................................................TCTCGAATAGCGTTGTGACTGTT......................................................................................... 23 1 1 35.00 35 7 10 15 3 0 0
..................................................TCTCGAATAGCGTTGTGACTGC.......................................................................................... 22 1 1 34.00 34 11 3 6 11 2 1
..................................................TCTCAAATAGCGTTGTGACTGA.......................................................................................... 22 1 1 34.00 34 29 3 0 2 0 0
..................................................TCTCGAATGGCGTTGTGACT............................................................................................ 20 1 1 33.00 33 33 0 0 0 0 0
..................................................TCTCGAATAGCGTTGTGTTT............................................................................................ 20 2 1 33.00 33 16 12 2 3 0 0
..................................................TCTCGAATAGCGTTGTGACTTA.......................................................................................... 22 1 1 31.00 31 4 13 6 6 0 2
..................................................TATCGAATAGCGTTGTGACTG........................................................................................... 21 1 1 30.00 30 0 16 11 3 0 0
..................................................TCTCGAATAGCGTTGTGACTTT.......................................................................................... 22 2 1 28.00 28 12 6 6 4 0 0
..................................................TATCGAATAGCGTTGTGACTGA.......................................................................................... 22 1 1 28.00 28 2 13 10 3 0 0
..................................................TCTCGAATAGAGTTGTGACTGA.......................................................................................... 22 1 1 28.00 28 2 15 5 2 4 0
..................................................TCTCGAATAGCTTTGTGACTGA.......................................................................................... 22 1 1 25.00 25 18 5 2 0 0 0
..................................................TCTCGAATAGCGTTGTGACTAA.......................................................................................... 22 1 1 25.00 25 1 18 6 0 0 0
..................................................TCTCGAATAGCGTTGTGACTCA.......................................................................................... 22 1 1 24.00 24 2 19 2 1 0 0
..................................................TCTCGAATAGCGTTGTGACTGATT........................................................................................ 24 1 1 23.00 23 10 4 9 0 0 0
..................................................TCTAGAATAGCGTTGTGACTG........................................................................................... 21 1 1 22.00 22 0 13 6 3 0 0
..................................................TCTCGAATAGCGTTGTGACTA........................................................................................... 21 1 1 22.00 22 2 17 3 0 0 0
..................................................TCTCGAATAGCGTCGTGACTGA.......................................................................................... 22 1 1 21.00 21 11 6 0 4 0 0
..................................................TCTCGAATAGCGCTGTGACTGA.......................................................................................... 22 1 1 20.00 20 7 11 1 1 0 0
..................................................TCTCGAATAGCGTTGTGACTC........................................................................................... 21 1 1 20.00 20 1 13 1 5 0 0
..................................................TCTCGAATAGAGTTGTGACTG........................................................................................... 21 1 1 20.00 20 0 15 4 1 0 0
...................................................CTCGAATAACGTTGTGACTGA.......................................................................................... 21 1 1 19.00 19 19 0 0 0 0 0
..................................................TCTCGAATAGCTTTGTGACTG........................................................................................... 21 1 1 19.00 19 8 8 2 1 0 0
..................................................TCTCGAATAGCGTTGCGACTGA.......................................................................................... 22 1 1 19.00 19 10 5 1 3 0 0
..................................................TCTCGAATAGCGTTGTGACTGAC......................................................................................... 23 1 1 19.00 19 13 1 1 2 2 0
...................................................CTCGAATAGCGTTGTGAC............................................................................................. 18 0 1 18.00 18 18 0 0 0 0 0
...................................................CTCGAATAGCGTTGTGACTGAT......................................................................................... 22 0 1 17.00 17 16 0 0 1 0 0
..................................................GCTCGAATAGCGTTGTGACTG........................................................................................... 21 1 1 17.00 17 15 1 0 1 0 0
..................................................CCTCGAATAGCGTTGTGACTGA.......................................................................................... 22 1 1 16.00 16 14 1 0 1 0 0
..................................................TCTCGAATAGCGTTGCGACTG........................................................................................... 21 1 1 16.00 16 3 10 0 3 0 0
..................................................TCTCAAATAGCGTTGTGACTG........................................................................................... 21 1 1 16.00 16 13 2 1 0 0 0
..................................................TCTCGAATAGCGTTGTCACTG........................................................................................... 21 1 1 15.00 15 3 4 2 6 0 0
..................................................ACTCGAATAGCGTTGTGACTGA.......................................................................................... 22 1 1 15.00 15 11 1 1 2 0 0
.....................................................CGAATAGCGTTGTGACTG........................................................................................... 18 0 1 15.00 15 14 0 1 0 0 0
.................................................CTCTCGAATAGCGTTGTGACTGA.......................................................................................... 23 1 1 15.00 15 13 0 0 2 0 0
..................................................TCTCGAATAGCGTTGTTACTG........................................................................................... 21 1 1 15.00 15 3 4 5 3 0 0
...................................................CTCGAATACCGTTGTGACTGA.......................................................................................... 21 1 1 14.00 14 14 0 0 0 0 0
.................................................TTCTCGAATAGCGTTGTGACTGA.......................................................................................... 23 1 1 14.00 14 14 0 0 0 0 0
......................................................GAATAGCGTTGTGACTGA.......................................................................................... 18 0 1 14.00 14 10 0 3 1 0 0
..................................................TCTCGAATAGCATTGTGACTG........................................................................................... 21 1 1 13.00 13 2 10 1 0 0 0
..................................................TCTCGAATAGCGTTGTTACTGA.......................................................................................... 22 1 1 13.00 13 9 2 2 0 0 0
..................................................TCGCGAATAGCGTTGTGACTGA.......................................................................................... 22 1 1 13.00 13 0 0 8 5 0 0
..................................................TGTCGAATAGCGTTGTGACTGA.......................................................................................... 22 1 1 13.00 13 2 3 0 1 7 0
..................................................TCTAGAATAGCGTTGTGACTGA.......................................................................................... 22 1 1 13.00 13 0 2 10 1 0 0
..................................................TCTCGAATAGCGTTGTGACTGATGGTAT.................................................................................... 28 0 1 13.00 13 9 3 0 1 0 0
..................................................TCTCGAATAGCGTTGTGACTGATGGTT..................................................................................... 27 1 1 13.00 13 3 3 7 0 0 0
..................................................TCTCTAATAGCGTTGTGACTGA.......................................................................................... 22 1 1 13.00 13 1 5 6 0 0 1
..................................................TCTCGAATAGCGTTGTGCCTG........................................................................................... 21 1 1 13.00 13 0 3 0 10 0 0
...................................................CTCGAATAACGTTGTGACTG........................................................................................... 20 1 1 12.00 12 12 0 0 0 0 0
..................................................TCTCGAATAGCATTGTGACTGA.......................................................................................... 22 1 1 12.00 12 1 10 0 0 1 0
...................................................CTCGAATACCGTTGTGACTG........................................................................................... 20 1 1 12.00 12 12 0 0 0 0 0
..................................................TCTCGAATAGCGATGTGACTG........................................................................................... 21 1 1 12.00 12 1 10 0 1 0 0
..................................................TCTCGAGTAGCGTTGTGACTGA.......................................................................................... 22 1 1 12.00 12 4 0 6 2 0 0
..................................................TCTCGAATAGCGTTGTCACTGA.......................................................................................... 22 1 1 12.00 12 5 2 1 4 0 0
..................................................CCTCGAATAGCGTTGTGACTG........................................................................................... 21 1 1 12.00 12 6 4 0 2 0 0
..................................................TCTCGAATAGCGTTGTGAT............................................................................................. 19 1 1 12.00 12 8 4 0 0 0 0
...................................................CTCGAATATCGTTGTGACTGA.......................................................................................... 21 1 1 11.00 11 11 0 0 0 0 0
..................................................TCTCGAATAGCGCTGTGACTG........................................................................................... 21 1 1 11.00 11 5 3 2 1 0 0
..................................................TCTCGAATTGCGTTGTGACT............................................................................................ 20 1 1 11.00 11 11 0 0 0 0 0
...................................................CTCGAATAGCGTTGTGACTGT.......................................................................................... 21 1 1 11.00 11 10 0 1 0 0 0
..................................................TCTCGAATCGCGTTGTGACT............................................................................................ 20 1 1 10.00 10 10 0 0 0 0 0
..................................................TCTCGAATAGCGTTGTGGCTG........................................................................................... 21 1 1 10.00 10 6 1 0 3 0 0
..................................................TCCCGAATAGCGTTGTGACTGA.......................................................................................... 22 1 1 10.00 10 5 0 0 2 3 0
..................................................TCTTGAATAGCGTTGTGACTGA.......................................................................................... 22 1 1 10.00 10 3 3 3 1 0 0
..................................................TCTTGAATAGCGTTGTGACTG........................................................................................... 21 1 1 10.00 10 2 4 4 0 0 0
..................................................TCTCGAATAGCGATGTGACTGA.......................................................................................... 22 1 1 10.00 10 0 8 1 1 0 0
..................................................TCTCGAATAGCGTTGTGACTTTT......................................................................................... 23 2 1 10.00 10 2 0 8 0 0 0
..................................................TCTCGAATAGCGTTGTGAA............................................................................................. 19 1 1 10.00 10 5 3 1 1 0 0
.....................................................CGAATAGCGTTGTGACTGA.......................................................................................... 19 0 1 10.00 10 9 1 0 0 0 0
..................................................TCTCGAATAGCGTTGTGACCGA.......................................................................................... 22 1 1 10.00 10 5 2 0 3 0 0
...........................................................................................CGAGACAATGCTATTCTTGTAA................................................. 22 0 1 9.00 9 3 0 3 1 2 0
..................................................TCTCGAATAGCGTTGTGGCTGA.......................................................................................... 22 1 1 9.00 9 5 0 2 2 0 0
...................................................CTCGAATAGCGTTGTGACTGAG......................................................................................... 22 1 1 9.00 9 9 0 0 0 0 0
..................................................TCCCGAATAGCGTTGTGACTG........................................................................................... 21 1 1 9.00 9 3 3 2 1 0 0
.................................................GTCTCGAATAGCGTTGTGACTGA.......................................................................................... 23 1 1 9.00 9 9 0 0 0 0 0
...................................................CTCGAATATCGTTGTGACTG........................................................................................... 20 1 1 9.00 9 7 2 0 0 0 0
..................................................TCTCGAATAGCGTTGAGACTG........................................................................................... 21 1 1 9.00 9 1 5 1 2 0 0
..................................................TCTCGAATAGCGTTGTGACCG........................................................................................... 21 1 1 9.00 9 6 1 0 2 0 0
....................................................TCGAATAGCGTTGTGACT............................................................................................ 18 0 1 9.00 9 9 0 0 0 0 0
..................................................TCTCGAATAGCGTTGTGTCTG........................................................................................... 21 1 1 8.00 8 1 1 0 6 0 0
..................................................ACTCGAATAGCGTTGTGACTG........................................................................................... 21 1 1 8.00 8 8 0 0 0 0 0
..................................................TCTCGAATAGCGTTGAGACTGA.......................................................................................... 22 1 1 8.00 8 1 6 0 1 0 0
..................................................TCTCGAATAGCGTTGTAACTGA.......................................................................................... 22 1 1 8.00 8 3 4 0 1 0 0
..................................................TCTCGAATAGCGTTGTGAATGA.......................................................................................... 22 1 1 8.00 8 3 1 3 1 0 0
..................................................TCTCGAATAGCGTTGTGTA............................................................................................. 19 2 1 8.00 8 4 0 0 4 0 0
..................................................TCTCTAATAGCGTTGTGACT............................................................................................ 20 1 1 7.00 7 2 3 2 0 0 0
..................................................TCTCGAATAGCGTTGTGCCTGA.......................................................................................... 22 1 1 7.00 7 1 0 0 6 0 0
..................................................TCTCGAATAGCCTTGTGACTGA.......................................................................................... 22 1 1 7.00 7 1 6 0 0 0 0
..................................................TCTCGAATGGCGTTGTGACTGT.......................................................................................... 22 2 1 7.00 7 7 0 0 0 0 0
..................................................TCTCGGATAGCGTTGTGACTG........................................................................................... 21 1 1 7.00 7 3 2 0 2 0 0
.....................................................CGAATAGCGTTGTGACTGAGG........................................................................................ 21 1 1 7.00 7 6 0 1 0 0 0
..................................................TCTCGAATAGCGTCGTGACTG........................................................................................... 21 1 1 7.00 7 3 3 1 0 0 0
..................................................TCGCGAATAGCGTTGTGACTG........................................................................................... 21 1 1 6.00 6 0 1 0 5 0 0
..................................................TCTCGAATAGCGTGGTGACTGA.......................................................................................... 22 1 1 6.00 6 1 3 0 2 0 0
..................................................TCTCGAATGGCGTTGTGACTGC.......................................................................................... 22 2 1 6.00 6 6 0 0 0 0 0
..................................................TCTCGAATAGCGTTTTGACTG........................................................................................... 21 1 1 6.00 6 2 3 1 0 0 0
...........................................................................................CGAGACAATGCTATTCTTGTA.................................................. 21 0 1 6.00 6 6 0 0 0 0 0
..................................................TCTCGAATAGTGTTGTGACTGA.......................................................................................... 22 1 1 6.00 6 1 2 0 3 0 0
..................................................TCTCGAATAGCGTTGTAACTG........................................................................................... 21 1 1 6.00 6 2 1 1 2 0 0
..................................................TCTCGAATAGAGTTGTGACT............................................................................................ 20 1 1 6.00 6 0 3 2 1 0 0
..................................................TCTCGAATAGCGGTGTGACTGA.......................................................................................... 22 1 1 6.00 6 2 4 0 0 0 0
...................................................CTCGAATAGCGTTGTGACTGAA......................................................................................... 22 1 1 6.00 6 6 0 0 0 0 0
..................................................TCTCTAATAGCGTTGTGACTG........................................................................................... 21 1 1 5.00 5 0 1 3 0 0 1
.................................................ATCTCGAATAGCGTTGTGACTGA.......................................................................................... 23 0 1 5.00 5 5 0 0 0 0 0
..................................................TCTCGAGTAGCGTTGTGACTG........................................................................................... 21 1 1 5.00 5 2 1 2 0 0 0
.................................................TTCTCGAATAGCGTTGTGACTG........................................................................................... 22 1 1 5.00 5 5 0 0 0 0 0
..................................................TTTCGAATAGCGTTGTGACTGA.......................................................................................... 22 1 1 5.00 5 0 5 0 0 0 0
..................................................TCTCGAATAGCGTAGTGACTGA.......................................................................................... 22 1 1 5.00 5 1 4 0 0 0 0
..................................................TCTCGAATAGCGTTGTGACTGATGGTATT................................................................................... 29 0 1 5.00 5 5 0 0 0 0 0
..................................................TCTCGAATAGCGTTGTGAATG........................................................................................... 21 1 1 5.00 5 0 3 1 1 0 0
..................................................TCTCGAATAGCGTTGTGTTTT........................................................................................... 21 3 5 5.00 25 14 4 7 0 0 0
..................................................TCTCGAATAGCGTTGTGACTGAG......................................................................................... 23 1 1 5.00 5 5 0 0 0 0 0
..................................................TCTCGAATAGCGTTATGACTGA.......................................................................................... 22 1 1 5.00 5 4 0 0 1 0 0
..................................................TCTCGAATAGCGTTGTGACTGAAA........................................................................................ 24 2 1 5.00 5 5 0 0 0 0 0
..................................................TCTCGAATAGCGTTATGACTG........................................................................................... 21 1 1 5.00 5 2 2 1 0 0 0
..................................................TCTCGAATAGCGTTGGGACTGA.......................................................................................... 22 1 1 5.00 5 2 2 0 1 0 0
..................................................TCTCGAATAGCGTAGTGACTG........................................................................................... 21 1 1 5.00 5 0 4 0 1 0 0
..................................................TCTCGAATAGCCTTGTGACTG........................................................................................... 21 1 1 5.00 5 1 3 1 0 0 0
..................................................TCTCGAATAGCGTTGTGTCTGA.......................................................................................... 22 1 1 5.00 5 0 0 0 5 0 0
..................................................TCTCGAATAGCGTTTTGACTGA.......................................................................................... 22 1 1 4.00 4 2 0 1 0 0 1
..................................................TCTCGTATAGCGTTGTGACTGA.......................................................................................... 22 1 1 4.00 4 2 0 0 1 1 0
..................................................TCTCGAATACCGTTGTGACTGA.......................................................................................... 22 1 1 4.00 4 1 1 0 2 0 0
..................................................TCTCGAATAGCGTTGTGACGG........................................................................................... 21 1 1 4.00 4 2 0 0 2 0 0
..................................................TCTCGAATGGCGTTGTGACTGAT......................................................................................... 23 1 1 4.00 4 4 0 0 0 0 0
..................................................TATCGAATAGCGTTGTGACT............................................................................................ 20 1 1 4.00 4 0 2 1 1 0 0
....................................................TCGAATAGAGTTGTGACTGA.......................................................................................... 20 1 1 4.00 4 4 0 0 0 0 0
..................................................TCTCGAATATCGTTGTGA.............................................................................................. 18 1 1 4.00 4 1 0 3 0 0 0
..................................................TCTCGAATAACGTTGTGACTG........................................................................................... 21 1 1 4.00 4 1 1 1 1 0 0
..................................................TCTCGAATGGCGTTGTGACTGG.......................................................................................... 22 2 1 4.00 4 4 0 0 0 0 0
..................................................TCTCGAATATCGTTGTGACTT........................................................................................... 21 2 1 4.00 4 0 3 1 0 0 0
.................................................CTCTCGAATAGCGTTGTGACTG........................................................................................... 22 1 1 4.00 4 4 0 0 0 0 0
...........................................................................................CGAGACAATGCTATTCTTGT................................................... 20 0 1 4.00 4 0 0 4 0 0 0
..................................................TCTCGAATAGCGTGGTGACTG........................................................................................... 21 1 1 4.00 4 0 3 0 1 0 0
..................................................TCTCGAATAGCGTTGTGATA............................................................................................ 20 2 1 4.00 4 1 3 0 0 0 0
..................................................TCTCGAATAGCGTTCTGACTGA.......................................................................................... 22 1 1 3.00 3 0 1 0 1 1 0
..................................................TCTCGAATAGGGTTGTGACTGA.......................................................................................... 22 1 1 3.00 3 1 2 0 0 0 0
..................................................TCTCGAATAGCGTTGTGACTGTTT........................................................................................ 24 2 1 3.00 3 2 1 0 0 0 0
..................................................TCTCGAAGAGCGTTGTGACTG........................................................................................... 21 1 1 3.00 3 0 0 0 3 0 0
...................................................CTCGAATAGCGTTGTGACTT........................................................................................... 20 1 1 3.00 3 3 0 0 0 0 0
..................................................TCTCGAATAGCGTTGGGACTG........................................................................................... 21 1 1 3.00 3 1 1 0 1 0 0
..................................................TTTCGAATAGCGTTGTGACTG........................................................................................... 21 1 1 3.00 3 1 0 1 1 0 0
..................................................TCTCGTATAGCGTTGTGACTG........................................................................................... 21 1 1 3.00 3 1 2 0 0 0 0
..................................................TCTCGAAGAGCGTTGTGACTGA.......................................................................................... 22 1 1 3.00 3 0 1 0 2 0 0
.................................................ATCTCGAATAGCGTTGTGACT............................................................................................ 21 0 1 3.00 3 3 0 0 0 0 0
..................................................TCTCGGATAGCGTTGTGACTGA.......................................................................................... 22 1 1 3.00 3 3 0 0 0 0 0
..................................................TCTCAAATAGCGTTGTGAC............................................................................................. 19 1 1 3.00 3 2 0 0 1 0 0
..................................................TCTCGACTAGCGTTGTGACTGA.......................................................................................... 22 1 1 3.00 3 0 1 0 2 0 0
...................................................CTCGAATAGCGTTGTGACTGATGGT...................................................................................... 25 0 1 3.00 3 3 0 0 0 0 0
...................................................CTCGAATAGCGTTGTGACTGATGG....................................................................................... 24 0 1 3.00 3 2 0 1 0 0 0
.................................................ATCTCGAATAGCGTTGTGACTG........................................................................................... 22 0 1 3.00 3 3 0 0 0 0 0
..................................................CCTCGAATAGCGTTGTGACT............................................................................................ 20 1 1 3.00 3 3 0 0 0 0 0
..................................................TCTCGAATAGCGTTGAGACT............................................................................................ 20 1 1 3.00 3 0 3 0 0 0 0
..................................................TCTCCAATAGCGTTGTGACTGA.......................................................................................... 22 1 1 3.00 3 2 0 1 0 0 0
..................................................TCTCGAATCGCGTTGTGACTGAT......................................................................................... 23 1 1 3.00 3 3 0 0 0 0 0
..................................................TCTCGAATGGCGGTGTGACTG........................................................................................... 21 2 1 3.00 3 3 0 0 0 0 0
..................................................TCTCGAATACCGTTGTGACTG........................................................................................... 21 1 1 3.00 3 0 2 0 1 0 0
..................................................TCTCGAATAGCGTTCTGACTG........................................................................................... 21 1 1 3.00 3 0 0 0 3 0 0
..................................................TCTCGAATAGTGTTGTGACTG........................................................................................... 21 1 1 3.00 3 0 1 2 0 0 0
..................................................TCTCGAATTGCGTTGTGACTGAT......................................................................................... 23 1 1 3.00 3 3 0 0 0 0 0
..................................................TCTCGAATATCGTTGTGACT............................................................................................ 20 1 1 3.00 3 0 3 0 0 0 0
.....................................................CGAATAGCGTTGTGACTGAGGTA...................................................................................... 23 3 1 3.00 3 2 0 0 0 0 1
..................................................TCTCGAATAACGTTGTGACTGA.......................................................................................... 22 1 1 3.00 3 2 0 1 0 0 0
..................................................TCTCAAATAGCGTTGTGACT............................................................................................ 20 1 1 3.00 3 2 1 0 0 0 0
..................................................TCTCGAATAGCGTTGTGACC............................................................................................ 20 1 1 3.00 3 2 0 0 0 1 0
..................................................TCTCGATTAGCGTTGTGACTG........................................................................................... 21 1 1 3.00 3 1 1 0 0 1 0
..................................................TCTCGAATAGCGTTGTGAGTG........................................................................................... 21 1 1 3.00 3 2 0 1 0 0 0
..................................................TCTCGAATACCGTTGTCACTG........................................................................................... 21 2 1 2.00 2 0 0 0 2 0 0
..................................................TCTCGGATAGCGTTGTGACT............................................................................................ 20 1 1 2.00 2 0 0 0 2 0 0
..................................................TCTCGAATAGCGTTGTGTG............................................................................................. 19 2 1 2.00 2 1 1 0 0 0 0
..................................................TCTCGAATAGCGGTGTGACTG........................................................................................... 21 1 1 2.00 2 2 0 0 0 0 0
..................................................GCTCGAATAGCGTTGTGA.............................................................................................. 18 1 1 2.00 2 1 0 0 1 0 0
..................................................TCGCGAATAGCGTTGTGACT............................................................................................ 20 1 1 2.00 2 0 0 1 1 0 0
..................................................TCTCGAATAGCGTTGTGG.............................................................................................. 18 1 1 2.00 2 0 0 1 1 0 0
..................................................TCTCGAATAGGGTTGTGACTG........................................................................................... 21 1 1 2.00 2 0 2 0 0 0 0
..................................................TGTCGAATAGCGTTGTGACTG........................................................................................... 21 1 1 2.00 2 0 1 0 1 0 0
..................................................TCACGAATAGCGTTGTGACTGA.......................................................................................... 22 1 1 2.00 2 1 1 0 0 0 0
..................................................TCTCGAATAGCGTCGTGACTC........................................................................................... 21 2 1 2.00 2 0 0 0 2 0 0
..................................................TCTCGAATTGCGTTGTGACTGC.......................................................................................... 22 2 1 2.00 2 2 0 0 0 0 0
....................................................TCAAATAGCGTTGTGACTGA.......................................................................................... 20 1 1 2.00 2 0 0 2 0 0 0
..................................................AATCGAATAGCGTTGTGACTGA.......................................................................................... 22 2 1 2.00 2 0 2 0 0 0 0
..................................................TCTCGAATAGCATTGTGACT............................................................................................ 20 1 1 2.00 2 1 1 0 0 0 0
..................................................TCTCGAATAGCGTTGTGACTTC.......................................................................................... 22 2 1 2.00 2 0 0 1 1 0 0
..................................................TCTCGAATAGCGTTGTG............................................................................................... 17 0 1 2.00 2 0 0 0 2 0 0
..................................................TCTCGAATTGCGTTGTGACTGT.......................................................................................... 22 2 1 2.00 2 2 0 0 0 0 0
..................................................TCTCGAATAGCGCTGTTACTGA.......................................................................................... 22 2 1 2.00 2 0 0 0 1 0 1
..................................................TCTGGAATAGCGTTGTGACTG........................................................................................... 21 1 1 2.00 2 1 1 0 0 0 0
..................................................TCTCGAATAGCGTTGTTACT............................................................................................ 20 1 1 2.00 2 1 0 1 0 0 0
...................................................TTCGAATAGCGTTGTGACTGA.......................................................................................... 21 1 1 2.00 2 2 0 0 0 0 0
..................................................TCTCGAATAGCGTTGTGATTG........................................................................................... 21 1 1 2.00 2 0 0 1 1 0 0
....................................................TCAAATAGCGTTGTGACTG........................................................................................... 19 1 1 2.00 2 1 1 0 0 0 0
..................................................TCTCGAATAGCGTTGTGACTTATGG....................................................................................... 25 1 1 2.00 2 0 2 0 0 0 0
..................................................TCTCGCATAGCGTTGTGACTG........................................................................................... 21 1 1 2.00 2 0 0 0 2 0 0
....................................................TCGAATAGTGTTGTGACTGA.......................................................................................... 20 1 1 2.00 2 2 0 0 0 0 0
..................................................TCTCGAATCGCGTTGTGACTGT.......................................................................................... 22 2 1 2.00 2 2 0 0 0 0 0
..................................................TCTCGAATGGCGTTGTGAC............................................................................................. 19 1 1 2.00 2 1 1 0 0 0 0
....................................................TCGAATAGGGTTGTGACTGA.......................................................................................... 20 1 1 2.00 2 2 0 0 0 0 0
..................................................TCTCGAACAGCGTTGTGACT............................................................................................ 20 1 1 2.00 2 0 0 1 1 0 0
..................................................TCTCGAATCGCGGTGTGACTGA.......................................................................................... 22 2 1 2.00 2 2 0 0 0 0 0
..................................................TCTCGAATAGCGTTGTGATTGA.......................................................................................... 22 1 1 2.00 2 1 0 0 1 0 0
..................................................TCTCGAATGGCGTTGTGACTGAA......................................................................................... 23 2 1 2.00 2 2 0 0 0 0 0
...................................................CTCGAATAGCTTTGTGACTGA.......................................................................................... 21 1 1 2.00 2 2 0 0 0 0 0
..................................................TCTGGAATAGCGTTGTGACTGA.......................................................................................... 22 1 1 2.00 2 1 1 0 0 0 0
..................................................TCTCGAATAGCGTTGTGACA............................................................................................ 20 1 1 2.00 2 1 1 0 0 0 0
..................................................TCTCGAATAGCGTTGTGACTGGTT........................................................................................ 24 2 1 2.00 2 1 0 1 0 0 0
.................................................TTCTCGAAGAGCGTTGTGACTG........................................................................................... 22 2 1 2.00 2 2 0 0 0 0 0
..................................................TCTCGAGTAGCGTTGTGACT............................................................................................ 20 1 1 2.00 2 1 1 0 0 0 0
..................................................TCTCGAATAGCGTCGTGACT............................................................................................ 20 1 1 2.00 2 0 2 0 0 0 0
..................................................TCTCGACTAGCGTTGTGACTG........................................................................................... 21 1 1 2.00 2 0 1 0 1 0 0
..................................................GCTCGAATAGCGTTGTGACT............................................................................................ 20 1 1 2.00 2 2 0 0 0 0 0
...................................................GTCGAATAGCGTTGTGACTG........................................................................................... 20 1 1 2.00 2 2 0 0 0 0 0
...................................................CTCGAATAGCGCTGTGACTGAT......................................................................................... 22 1 1 2.00 2 2 0 0 0 0 0
..................................................TCTCGAATAGCTTTGTGACTGAT......................................................................................... 23 1 1 2.00 2 2 0 0 0 0 0
.................................................GTCTCGAATAGCGTTGTGACT............................................................................................ 21 1 1 2.00 2 2 0 0 0 0 0
..................................................TCTCGAATATCGTTGTGACTGATGGT...................................................................................... 26 1 1 2.00 2 0 2 0 0 0 0
..................................................TCTCGAACAGCGTTGTGACTG........................................................................................... 21 1 1 2.00 2 1 0 0 1 0 0
..................................................TCTCGAATAGCGTTGTGACTGAAT........................................................................................ 24 2 1 2.00 2 0 1 1 0 0 0
..................................................TCTCGAATGGGGTTGTGACTGA.......................................................................................... 22 2 1 2.00 2 0 2 0 0 0 0
..................................................TCTCGAATAGCGTAGTGACT............................................................................................ 20 1 1 2.00 2 0 2 0 0 0 0
..................................................TCTCGAATTGCGTTGTGACTGG.......................................................................................... 22 2 1 2.00 2 2 0 0 0 0 0
..................................................TCTCGAATAGTGTTGTGACT............................................................................................ 20 1 1 2.00 2 1 1 0 0 0 0
..................................................TCTCGAATAGCGTTGTGACTGTA......................................................................................... 23 2 1 2.00 2 2 0 0 0 0 0
..................................................TCTCGAATAGCGTTGTGAGTGA.......................................................................................... 22 1 1 2.00 2 1 0 1 0 0 0
..................................................TCTAGAATAGCGTTGTGACT............................................................................................ 20 1 1 2.00 2 0 0 2 0 0 0
..................................................TCTCGAATGGCGGTGTGACTGA.......................................................................................... 22 2 1 2.00 2 2 0 0 0 0 0
..................................................TCTCGCATAGCGTTGTGACTGA.......................................................................................... 22 1 1 2.00 2 0 0 0 2 0 0
.................................................GTCTCGAATAGCGTTGTGACTG........................................................................................... 22 1 1 2.00 2 2 0 0 0 0 0
..................................................TCGCGAATAGCGTTGTGGCTG........................................................................................... 21 2 1 2.00 2 0 0 0 2 0 0
...................................................CTCGAATAGCGCTGTGACTGA.......................................................................................... 21 1 1 2.00 2 2 0 0 0 0 0
...................................................GTCGAATAGCGTTGTGACTGA.......................................................................................... 21 1 1 2.00 2 2 0 0 0 0 0
..................................................TCTCGAATAGCGTTGTACCTG........................................................................................... 21 2 1 2.00 2 0 0 0 2 0 0
..................................................TCTCGAATAGCGATGTGACT............................................................................................ 20 1 1 2.00 2 1 1 0 0 0 0
.................................................CTCTCGAAGAGCGTTGTGACTGA.......................................................................................... 23 2 1 2.00 2 2 0 0 0 0 0
..................................................TCTCGAATAGCGTTGTGACTGATCGA...................................................................................... 26 2 1 2.00 2 2 0 0 0 0 0
..................................................TCTCGAATAGCGTCGTGAC............................................................................................. 19 1 1 2.00 2 0 1 1 0 0 0
..................................................TCTCGAATAGCGTTGTGACTAATGGT...................................................................................... 26 1 1 2.00 2 1 0 1 0 0 0
..................................................TCTCGAATAGCGATGTGA.............................................................................................. 18 1 1 2.00 2 0 0 0 2 0 0
..................................................TCTCGAATAGCGTTGTGACCGAT......................................................................................... 23 1 1 1.00 1 1 0 0 0 0 0
..................................................TCTAGAATAGCGTTGTGACTGATGGTA..................................................................................... 27 1 1 1.00 1 0 0 1 0 0 0
..................................................TATCGAATAGAGTTGTGACTGC.......................................................................................... 22 3 1 1.00 1 0 0 0 1 0 0
..................................................TCCCGAATAGAGTTGTGA.............................................................................................. 18 2 1 1.00 1 0 0 0 1 0 0
..................................................TATCGAATAGCGTTGTCACTCA.......................................................................................... 22 3 1 1.00 1 0 0 0 1 0 0
..................................................TCTCGAATAGAGTTGTGAC............................................................................................. 19 1 1 1.00 1 0 0 0 0 1 0
.................................................GTCTCGAATAGCGTTGTGACTGAT......................................................................................... 24 1 1 1.00 1 1 0 0 0 0 0
..................................................TCTCGAATAGCGTTGTGACTGTTCGA...................................................................................... 26 3 1 1.00 1 1 0 0 0 0 0
..................................................TCTCGAATAGCTTTGTTACTGATGGT...................................................................................... 26 2 1 1.00 1 0 0 0 0 0 1
..................................................TCTCGAATAGCGTTGCGACTT........................................................................................... 21 2 1 1.00 1 0 0 0 1 0 0
....................................................TCGAATAGCGTTGTGACTGAT......................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0
..................................................TCTCGAATAGCGTTTTGACTGTT......................................................................................... 23 2 1 1.00 1 0 0 1 0 0 0
..................................................TCTCAAAGAGCGTTGTGACTG........................................................................................... 21 2 1 1.00 1 0 0 0 1 0 0
....................................................TTGAATAGCGTTGTGACTGATGG....................................................................................... 23 1 1 1.00 1 0 1 0 0 0 0
..................................................TCTCGAATATCGTTGTTACTGATG........................................................................................ 24 2 1 1.00 1 0 0 1 0 0 0
..................................................TCTTGAATAGCGTTGTGACT............................................................................................ 20 1 1 1.00 1 0 1 0 0 0 0
..................................................CATCGAATAGCGTTGTGACT............................................................................................ 20 2 1 1.00 1 0 1 0 0 0 0
..................................................TCTCGAATAGCGTTGTGACGGT.......................................................................................... 22 2 1 1.00 1 1 0 0 0 0 0
..................................................TCTCGAATAGCGTTGTGATTTTT......................................................................................... 23 3 1 1.00 1 1 0 0 0 0 0
..................................................TCTCGAATAGCCTTGCGACTGT.......................................................................................... 22 3 1 1.00 1 0 0 0 1 0 0
..................................................TCTCTAATAGCGTTGTGACTGATGGT...................................................................................... 26 1 1 1.00 1 0 0 1 0 0 0
...................................................CTCGAATAGCGTTGTGACTGATT........................................................................................ 23 1 1 1.00 1 1 0 0 0 0 0
...................................................CTCGAATATCTTTGTGACTGAG......................................................................................... 22 3 1 1.00 1 1 0 0 0 0 0
..................................................TCTAGAATAGAGTTGTGACTGT.......................................................................................... 22 3 1 1.00 1 0 0 1 0 0 0
..................................................TCTCGAATAGCGTTGTGACTAATGGTA..................................................................................... 27 1 1 1.00 1 0 1 0 0 0 0
.................................................ATCTCGAATAGCGTTGTGACTGATGGTA..................................................................................... 28 0 1 1.00 1 1 0 0 0 0 0
..................................................TCTCGAACAGCGTTGCGAGTGA.......................................................................................... 22 3 1 1.00 1 0 0 0 0 0 1
..................................................TGTCGAATAGCGTTGTGACTGAT......................................................................................... 23 1 1 1.00 1 0 0 0 0 1 0
..................................................TCTCGAATAGCGTTGTGGCTGT.......................................................................................... 22 2 1 1.00 1 0 0 0 1 0 0
..................................................TCTCGACTACCGTTCTGACTGA.......................................................................................... 22 3 1 1.00 1 0 0 0 1 0 0
..................................................TCTCGAATAGTGTTGTGACTGTTT........................................................................................ 24 3 1 1.00 1 1 0 0 0 0 0
..................................................TCTCGTATAGCGTTGTGA.............................................................................................. 18 1 1 1.00 1 0 0 0 1 0 0
..................................................TCTCGAATAGCGTTGTGATAT........................................................................................... 21 3 1 1.00 1 0 1 0 0 0 0
...........................................................................................CCAGACAATGCTATTCTTGT................................................... 20 1 1 1.00 1 0 0 1 0 0 0
..................................................TCTCGAAGAGCGTTGTGACTGT.......................................................................................... 22 2 1 1.00 1 0 0 0 1 0 0
..................................................TCTCGAATATCGTTGTGACTA........................................................................................... 21 2 1 1.00 1 0 1 0 0 0 0

Anti-sense strand reads

AAACACTTTTCGGAAGAAACCAAAGGACTCCTATGCAGGTTTTACTGAGTAGAGCTTATCGCAACACTGACTACCATAAATTTATATTTAGGCTCTGTTACGATAAGAACATTTCAGTAGAACTGGTTCGTTGAAAAAGATTAGCTAAGAATTATCACAGCC

***********************************(((.((.((((((......((((((((((((....(((.((((....))))..)))....))))))))))))......)))))).)))))..*********************************** 		Read size # Mismatch Hit Count Total Norm Total M044

female body

 V105

male body		 M058

embryo
.........................................................................................AGGCTCTGTTACGATAAGAACA................................................... 22 0 1 2.00 2 2 0 0
........................................................................................TAGGCTCTGTTACGATAAGAACA................................................... 23 0 1 1.00 1 0 1 0
..........................................................................................GGCTCTGTTACGATAAGAACA................................................... 21 0 1 1.00 1 1 0 0
..................ACCAAAGGACTGGTATGAAG............................................................................................................................ 20 3 2 0.50 1 0 0 1
........................................................................ACCATAAGTTTCTATTTA........................................................................ 18 2 20 0.10 2 1 0 1
.............................................................................AAATTTACATATAGGCTCCG................................................................. 20 3 19 0.05 1 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Type Alignment
droAna3 scaffold_13266:1670157-1670318 - dan_13 confident TTTG--TGAAAAGCCTTCTTT--------------------------------------------GGTTTCCTGAGGATACG----------TCCAAAATGACTCATCTCGAATAGCGTTGTGACTGATGGTAT------TTAAATATAAATCCGAGACAATGCTATTCTTGTAAAGTCATCTTGACCAA-GCAACTTTTTCTAATCGATTCTTAATAGTGTCGG-----------------------
droBip1 scf7180000396730:2663882-2664048 - TTTG--TAAAAGGCATTCTTTGT--A-----------------------------------AA-AAGATTCCAGAGGATACA----------CCCAAAATGACTCATCTCGAATAGCGTTGTGACTGAT-GTGT------TAAAGAATAAATCCGAGACAATGCTATTCTTGTAAAGTCATCTTGACCAA-GCAACTATTCATAATCGAATCTTAATAGGGTCGG-----------------------
droKik1 scf7180000302277:185613-185783 + TTCC--GATCGAGAG--------------------------------------------------AAAACGCCGAGGAAACACC-----CTTTCCGGAACGACCCATCTCGAATAGCGTTGTGACTGAG-GTAACTGCGATTCAAACTGACTCAGAGGCAGCGCTATTCCAGTGAGGTCGTTCTGGGCCA-GCCACTTT--ACAACCAGAATGAATGTGTGCTAACTGTCGG----------------
droFic1 scf7180000453851:2006743-2006914 - TTTGATCCCCAAAAGCCACAAGC--A---------------------GG---------------AAAAACGGAGAGGATAC-----------CCCGAAATTACCCATCTCGAATAGCGTTGTGACTGAG-GTAACTGCGCATCGAATCTACTCAGCGGCAACGCTATTCCAGGTGGGTTATTTCGGGCCA-GCGACTTT--ACGACCGAAAAATTTTGACGTTAA-----------------------
droEle1 scf7180000491240:1158459-1158620 + TTTT--GCTTAAGTGTCCATGGC--------------------------------------AC-AAATCCGAAGGGAATGCT----------CCCGAAACTACCCATTTCGAATGGCGTTGTGACTGAT-GTAACTGCGCATCGAATTAGCTCAGCGACAACGCTAATCCAGTTGGGTTACTTGGGGCCA-GCGACTTT--ACAACCGGAAAATTG--------G-----------------------
droRho1 scf7180000770177:457562-457730 + TTTT--CCTTAAATGTCCGTGGC--A--------------------------------------AAAAACGGATTGAATACT----------CCCGAAATCACCCATCTCGAATAGCGTTGTGACTGAG-GTAAGTGCGCTCCGAGTTGACTCAGCGGCAACGCTATTCCAGTTAGGTTGTTTTGGGTCA-GCGACTTT--ACGACCGGAAGGTTAGGGTGCTAA-----------------------
droBia1 scf7180000302291:2218538-2218693 + TTTT--TCCTGAATGCCGGTAGA---------------------------------------------------AGGAAACC----------CTCGAAATTACCCATCTCGAATAGCGTTGTGACTGAG-GTAACTGCGTATTGAATCGACTCAGCGACAAGGCTATTCAAGTTAGGTTATTTTGGGCCA-GCGACT----ACGACCGAAACATTAGGCTGTCAG-----------------------
droTak1 scf7180000415627:215794-215952 + TTTA--AGCAAAATTCGCATAGC--------------------TCTCGGCA-------------AAACAAGGAGACGATACA----------CCCGAAATTACCCATCTCGAATAGCGTTGTGACTGAG-GTAACTGCGCATCGAAACGACTCAGCGGCAACGCTATTTCAGATAGGTCATTTTGGGCCA-GCGACTTT--ACGACCG----------------------------------------
droEug1 scf7180000407691:192697-192875 + TATC--CTGTCAATTTCAATAGA--------------------AAACGTTAAAA----------AATAACCGAGAGTACACA----------CCCATAATCACCCATCTCGAATAGCGTTGTGACTGAG-TTAACTGCCCATTAAATCGACTCAGCGGCAACGCTATTCCAGTTAGGTTATTTTGGTCAA-GCGACTTT--ACGACCGGAAAATTGGGGTGTTGA-----------------------
dm3 chr2R:4332441-4332619 + dme-mir-986 Known_mirbase TTTT--TCATAGGAGCC------------------------------GGAAAAGTCGTAGCGTTAGCCACGCAGAGGACACA----------CCTGAAATTACCCATCTCGAATAGCGTTGTGACTGAG-GTAACTGCGCATCGAATCTACTCAGCGGCGAGGCTATTCAAGTAAGGTTATTTTGGGCCA-GCGACTTT--ACGACCGGAAAACAAGGGTGTTAA-----------------------
droSim2 2r:5147162-5147340 + dsi-mir-986 Known_mirbase TTTT--CCATAGGAGTC------------------------------GGATAGGTCGTGGTTTTAGCCACGCAGAGGACACA----------CCTGAAATTACCCATCTCGAATAGCGTTGTGACTGAG-GTAACTGCGCATCGAATCTACTCAGCGGCGAGGCTATTCCAGTAAGGTTGTTTTGGGCCA-GCGACTTT--ATGACCGGAAAACAAGGGTGTTAA-----------------------
droSec2 scaffold_1:1974043-1974221 + dse_15 confident TTTT--CCATAGTAGTT------------------------------GGATAGGTCGTGGTTTTAGCCACGCAGAGGACACA----------CCTGAAATTACCCATCTCGAATAGCGTTGTGACTGAG-GTAACTGCGCATCGAATCTACTCAGCGGCGAGGCTATTCCAGTAAGGTTGTTTTGGGCCA-GCGACTTT--ATGACCGGAAAACAAGGGTGTTAA-----------------------
droYak3 2L:16988517-16988695 + dya_15 confident TTTT--CAATAGAACTC------------------------------GGAAAAGTCGTTGTTTTAGAAACGCAGAGGACACA----------CCTAAAATTACCCATCTCGAATAGCGTTGTGACTGAG-GTAACTGCGCATCGTATCTACTCAGCGGCGAAGCTATTCCAGTAAGGTTATTTTGGGCCA-GCGACTTT--ACGACCGGAAAACAAGGGTGTTAA-----------------------
droEre2 scaffold_4929:18305661-18305856 - der_115 confident TTTT--CCATACAAGTC------------------------------GGAAAAGTCGTACTTTTAGATAC------GAGATA----------CCTAAGATTACCCATCTCGAATAGCGTTGTGACTGAG-GTAACTGCGCATCGAATCTACTCAGCGGCAAGGCTATTCCAGTAAGGTTATTTTGGGCCA-GCGACTCA--ACGACCGGAAAACAGGGGTGTTAACTATCAGGTAATGGGGCTGCTGG
dp5 3:2308584-2308720 + dps-mir-986 Known_mirbase TCCA--TCG--AATCTCCTTATC--------------------------------------TCCTGAATC----GGAGTACG----------ACTGAAACAACCCGTCTCGAATAGCGTTGTGACTGAT---GACTGCATTTGTAATTTTCTCAGCGGCAGTGCTATTCCAGTTGGGTTGTTTGCGGCCAAACAAC----------------------------------------------------
droPer2 scaffold_2:2480042-2480178 + dpe_21 confident TCCA--TCG--AATCTCCTTGTC--------------------------------------TCCTGAATC----GGAGTACG----------ACTGAAACAACCCGTCTCGAATAGCGTTGTGACTGAT---GACTGCATTTGTAATTTTCTCAGCGGCAGTGCTATTCCAGTTGGGTTGTTTGCGGCCAAACAAC----------------------------------------------------
droWil2 scf2_1100000004513:3161055-3161168 - CATA--CCATAAAAATATTTACT---------------------------------------------ACACAAAGTGAACA--GTTCGATGACTTAAATGCCCAATCTCGAATAGCGTTGTAACTGAT-G--ATTGTGATATGA-GAGAGTCAGCCACTATGCTAT---------------------------------------------------------------------------------
droMoj3 scaffold_6496:17707895-17708015 - dmo_22 confident TTGT--TGGCGAACTTT------------------------------CAATGGCTCATTTA------------------ACT----------GGCTAATTGCCTTCTCTCGAATTGCATTATGGCCGAT-GACACAATTCTGCAAAATCA-TCAGTTGGAATGCCATTCGGGTCAAGGCATTT-----------------------------------------------------------------
droGri2 scaffold_15245:2671266-2671396 + dgr_11 confident TTTA--CCTTAGTTTATTACTGAAATGGAAAGTTGCAAAGTTT----GAAT-----------------------------------------GGCTTATTGCCTTTTCTCGAATTGCATTGTGACTGAT-GAAAAT----TTAGAAATTCATCAGTTAAAATGCCATTCGAGTTAAGGCACTT-----------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droAna3
TTTG--TGAAAAGCCTTCTTT--------------------------------------------GGTTTCCTGAGGATACG----------TCCAAAATGACTCATCTCGAATAGCGTTGTGACTGATGGTAT------TTAAATATAAATCCGAGACAATGCTATTCTTGTAAAGTCATCTTGACCAA-GCAACTTTTTCTAATCGATTCTTAATAGTGTCGG-----------------------SizeHit CountTotal NormTotalM044

Female-body		M058

Embryo		V039

Embryo		V055

Head		V105

Male-body		V106

Head
..........................................................................................................TCTCGAATAGCGTTGTGACTGA........................................................................................................................22117144.0017144131491002478118771213
..........................................................................................................TCTCGAATAGCGTTGTGACTG.........................................................................................................................2119941.0099416494846192041775
..........................................................................................................TCTCGAATAGCGTTGTGACT..........................................................................................................................2011921.00192112838281416131
...........................................................................................................CTCGAATAGCGTTGTGACTGA........................................................................................................................2111269.0012691240006815
...........................................................................................................CTCGAATAGCGTTGTGACTG.........................................................................................................................201605.006055820021110
..........................................................................................................TCTCGAATAGCGTTGTGACTGAT.......................................................................................................................231328.0032824060174025
..........................................................................................................TCTCGAATAGCGTTGTGA............................................................................................................................181287.0028711400982649
..........................................................................................................TCTCGAATAGCGTTGTGAC...........................................................................................................................191260.0026017513229356
..........................................................................................................TCTCGAATAGCGTTGTGACTGATGG.....................................................................................................................251177.00177650094657
..........................................................................................................TCTCGAATAGCGTTGTGACTGT........................................................................................................................221153.001539700121925
...........................................................................................................CTCGAATAGCGTTGTGACT..........................................................................................................................19196.00969600000
..........................................................................................................TCTCGAATAGCGTTGTGT............................................................................................................................18195.0095360033026
............................................................................................................TCGAATAGCGTTGTGACTGA........................................................................................................................20175.00757300200
..........................................................................................................TCTCGAATAGCGTTGTGTT...........................................................................................................................19171.0071420031313
..........................................................................................................TCTCGAATAGCGTTGTGACTGAA.......................................................................................................................23168.0068410071010
..........................................................................................................TCTCGAATAGCGTTGTGACTGATGGTA...................................................................................................................27167.0067100012036
..........................................................................................................TCTCGAATAGCGTTGTGACTT.........................................................................................................................21162.0062230022512
..........................................................................................................TCTCGAATAGCGTTGTGACTGATG......................................................................................................................24160.0060190171815
..........................................................................................................TCTCGAATAGCGTTGTGACTGG........................................................................................................................22159.00595201132
............................................................................................................TCGAATAGCGTTGTGACTG.........................................................................................................................19149.00494200160
..........................................................................................................TCTCGAATAGCGTTGTGACTGATGGT....................................................................................................................26146.004640011724
..........................................................................................................TCTCGAATAGCGTTGTGACTGC........................................................................................................................22134.003411211136
..........................................................................................................TCTCGAATAGCGTTGTGACTTT........................................................................................................................22128.00281200466
..........................................................................................................TCTCGAATAGCGTTGTGACTGATT......................................................................................................................24123.00231000049
..........................................................................................................TCTCGAATAGCGTTGTGACTA.........................................................................................................................21122.00222000173
..........................................................................................................TCTCGAATAGCGTTGTGACTC.........................................................................................................................21120.00201005131
..........................................................................................................TCTCGAATAGCGTTGTGACTGAC.......................................................................................................................23119.00191320211
...........................................................................................................CTCGAATAGCGTTGTGAC...........................................................................................................................18118.00181800000
...........................................................................................................CTCGAATAGCGTTGTGACTGAT.......................................................................................................................22117.00171600100
.............................................................................................................CGAATAGCGTTGTGACTG.........................................................................................................................18115.00151400001
..............................................................................................................GAATAGCGTTGTGACTGA........................................................................................................................18114.00141000103
..........................................................................................................TCTCGAATAGCGTTGTGACTGATGGTAT------............................................................................................................28113.0013900130
..........................................................................................................TCTCGAATAGCGTTGTGACTGATGGTT...................................................................................................................27113.0013300037
..........................................................................................................TCTCGAATAGCGTTGTGAT...........................................................................................................................19112.0012800040
...........................................................................................................CTCGAATAGCGTTGTGACTGT........................................................................................................................21111.00111000001
..........................................................................................................TCTCGAATAGCGTTGTGAA...........................................................................................................................19110.0010500131
.............................................................................................................CGAATAGCGTTGTGACTGA........................................................................................................................19110.0010900010
.........................................................................................................................................................CGAGACAATGCTATTCTTGTAA.........................................................................2219.009320103
...........................................................................................................CTCGAATAGCGTTGTGACTGAG.......................................................................................................................2219.009900000
............................................................................................................TCGAATAGCGTTGTGACT..........................................................................................................................1819.009900000
..........................................................................................................TCTCGAATAGCGTTGTGTA...........................................................................................................................1918.008400400
.........................................................................................................................................................CGAGACAATGCTATTCTTGTA..........................................................................2116.006600000
...........................................................................................................CTCGAATAGCGTTGTGACTGAA.......................................................................................................................2216.006600000
.........................................................................................................ATCTCGAATAGCGTTGTGACTGA........................................................................................................................2315.005500000
..........................................................................................................TCTCGAATAGCGTTGTGACTGATGGTAT------T...........................................................................................................2915.005500000
..........................................................................................................TCTCGAATAGCGTTGTGACTGAG.......................................................................................................................2315.005500000
..........................................................................................................TCTCGAATAGCGTTGTGACTGAAA......................................................................................................................2415.005500000
.........................................................................................................................................................CGAGACAATGCTATTCTTGT...........................................................................2014.004000004
..........................................................................................................TCTCGAATAGCGTTGTGATA..........................................................................................................................2014.004100030
...........................................................................................................CTCGAATAGCGTTGTGACTT.........................................................................................................................2013.003300000
.........................................................................................................ATCTCGAATAGCGTTGTGACT..........................................................................................................................2113.003300000
...........................................................................................................CTCGAATAGCGTTGTGACTGATGGT....................................................................................................................2513.003300000
...........................................................................................................CTCGAATAGCGTTGTGACTGATGG.....................................................................................................................2413.003200001
.........................................................................................................ATCTCGAATAGCGTTGTGACTG.........................................................................................................................2213.003300000
..........................................................................................................TCTCGAATAGCGTTGTGACC..........................................................................................................................2013.003210000
..........................................................................................................TCTCGAATAGCGTTGTGTG...........................................................................................................................1912.002100010
..........................................................................................................TCTCGAATAGCGTTGTGG............................................................................................................................1812.002000101
..........................................................................................................TCTCGAATAGCGTTGTGACTTC........................................................................................................................2212.002000101
..........................................................................................................TCTCGAATAGCGTTGTG.............................................................................................................................1712.002000200
..........................................................................................................TCTCGAATAGCGTTGTGACA..........................................................................................................................2012.002100010
..........................................................................................................TCTCGAATAGCGTTGTGACTGAAT......................................................................................................................2412.002000011
..........................................................................................................TCTCGAATAGCGTTGTGACTGTA.......................................................................................................................2312.002200000
............................................................................................................TCGAATAGCGTTGTGACTGAT.......................................................................................................................2111.001100000
...........................................................................................................CTCGAATAGCGTTGTGACTGATT......................................................................................................................2311.001100000
.........................................................................................................ATCTCGAATAGCGTTGTGACTGATGGTA...................................................................................................................2811.001100000
..........................................................................................................TCTCGAATAGCGTTGTGATAT.........................................................................................................................2111.001000010
droBip1
TTTG--TAAAAGGCATTCTTTGT--A-----------------------------------AA-AAGATTCCAGAGGATACA----------CCCAAAATGACTCATCTCGAATAGCGTTGTGACTGAT-GTGT------TAAAGAATAAATCCGAGACAATGCTATTCTTGTAAAGTCATCTTGACCAA-GCAACTATTCATAATCGAATCTTAATAGGGTCGG-----------------------SizeHit CountTotal NormTotal
No Reads
droKik1
TTCC--GATCGAGAG--------------------------------------------------AAAACGCCGAGGAAACACC-----CTTTCCGGAACGACCCATCTCGAATAGCGTTGTGACTGAG-GTAACTGCGATTCAAACTGACTCAGAGGCAGCGCTATTCCAGTGAGGTCGTTCTGGGCCA-GCCACTTT--ACAACCAGAATGAATGTGTGCTAACTGTCGG----------------SizeHit CountTotal NormTotal
No Reads
droFic1
TTTGATCCCCAAAAGCCACAAGC--A---------------------GG---------------AAAAACGGAGAGGATAC-----------CCCGAAATTACCCATCTCGAATAGCGTTGTGACTGAG-GTAACTGCGCATCGAATCTACTCAGCGGCAACGCTATTCCAGGTGGGTTATTTCGGGCCA-GCGACTTT--ACGACCGAAAAATTTTGACGTTAA-----------------------SizeHit CountTotal NormTotal
No Reads
droEle1
TTTT--GCTTAAGTGTCCATGGC--------------------------------------AC-AAATCCGAAGGGAATGCT----------CCCGAAACTACCCATTTCGAATGGCGTTGTGACTGAT-GTAACTGCGCATCGAATTAGCTCAGCGACAACGCTAATCCAGTTGGGTTACTTGGGGCCA-GCGACTTT--ACAACCGGAAAATTG--------G-----------------------SizeHit CountTotal NormTotal
No Reads
droRho1
TTTT--CCTTAAATGTCCGTGGC--A--------------------------------------AAAAACGGATTGAATACT----------CCCGAAATCACCCATCTCGAATAGCGTTGTGACTGAG-GTAAGTGCGCTCCGAGTTGACTCAGCGGCAACGCTATTCCAGTTAGGTTGTTTTGGGTCA-GCGACTTT--ACGACCGGAAGGTTAGGGTGCTAA-----------------------SizeHit CountTotal NormTotal
No Reads
droBia1
TTTT--TCCTGAATGCCGGTAGA---------------------------------------------------AGGAAACC----------CTCGAAATTACCCATCTCGAATAGCGTTGTGACTGAG-GTAACTGCGTATTGAATCGACTCAGCGACAAGGCTATTCAAGTTAGGTTATTTTGGGCCA-GCGACT----ACGACCGAAACATTAGGCTGTCAG-----------------------SizeHit CountTotal NormTotal
No Reads
droTak1
TTTA--AGCAAAATTCGCATAGC--------------------TCTCGGCA-------------AAACAAGGAGACGATACA----------CCCGAAATTACCCATCTCGAATAGCGTTGTGACTGAG-GTAACTGCGCATCGAAACGACTCAGCGGCAACGCTATTTCAGATAGGTCATTTTGGGCCA-GCGACTTT--ACGACCG----------------------------------------SizeHit CountTotal NormTotal
No Reads
droEug1
TATC--CTGTCAATTTCAATAGA--------------------AAACGTTAAAA----------AATAACCGAGAGTACACA----------CCCATAATCACCCATCTCGAATAGCGTTGTGACTGAG-TTAACTGCCCATTAAATCGACTCAGCGGCAACGCTATTCCAGTTAGGTTATTTTGGTCAA-GCGACTTT--ACGACCGGAAAATTGGGGTGTTGA-----------------------SizeHit CountTotal NormTotal
No Reads
dm3
TTTT--TCATAGGAGCC------------------------------GGAAAAGTCGTAGCGTTAGCCACGCAGAGGACACA----------CCTGAAATTACCCATCTCGAATAGCGTTGTGACTGAG-GTAACTGCGCATCGAATCTACTCAGCGGCGAGGCTATTCAAGTAAGGTTATTTTGGGCCA-GCGACTTT--ACGACCGGAAAACAAGGGTGTTAA-----------------------SizeHit CountTotal NormTotalGSM154618

Ovary		GSM154620

Ovary		GSM154621

Ovary		GSM154622

Ovary		GSM180328

Head		GSM180329

Mixed-body		GSM180330

Embryo		GSM180331

Embryo		GSM180332

Embryo		GSM180333

Embryo		GSM180334

Larvae		GSM180335

Disc		GSM180336

Pupae		GSM180337

S2		GSM239041

Head		GSM239050

Head		GSM239051

S2		GSM239052

S2		GSM246084

Head		GSM266765

S2		GSM280082

Ovary		GSM280083

Ovary		GSM280084

Ovary		GSM280085

Testis		GSM280086

Ovary		GSM280087

S2-NP		GSM280088

S2-NP		GSM312995

Head		GSM313160

Head		GSM313161

Head		GSM313162

Head		GSM313163

Head		GSM313164

Head		GSM313165

Head		GSM343287

Embryo		GSM379050

Ovary		GSM379051

Ovary		GSM379052

Ovary		GSM379053

Ovary		GSM379054

Ovary		GSM379055

Ovary		GSM379056

Ovary		GSM379057

Ovary		GSM379058

Ovary		GSM379059

Ovary		GSM379060

Ovary		GSM379061

Ovary		GSM379062

Ovary		GSM379063

Ovary		GSM379064

Ovary		GSM379065

Ovary		GSM379066

Ovary		GSM379067

Ovary		GSM424739

S2		GSM424740

S2		GSM424741

S2		GSM467729

Female-body		GSM467730

Female-body		GSM467731

Female-body		M002

CS		M003

Male-body		M004

Male-body		M005

ML-DmD32		M006

ML-DmD32		M029

OSC		M030

OSC		M031

OSC		M032

S2-R+		M033

S2-R+		M034

S2-R+		M035

S2-R+		M036

S2-R+		M037

S2-R+		M038

S2-R+		M039

S2-R+		M048

S2-R+		OSS2

OSS		OSS6

OSS		OSS7

OSS		OSS8

OSS		S1

Head		S10

Embryo		S11

Embryo		S12

Embryo		S13

Embryo		S14

Embryo		S15

S2-GMR		S16

Kc		S17

Larvae		S18

Larvae		S19

Pupae		S2

Head		S20

Pupae		S21

Disc		S22

Head		S23

Female-body		S24

Male-body		S25

Larvae		S26

Larvae		S27

Pupae		S28

Pupae		S29

Head		S3

Male-body		S30

S2-GMR		S31

S2		S32

S2		S33

Kc		S34

Kc		S35

Kc		S4

Female-body		S5

Disc		S6

Embryo		S7

Embryo		S8

S2		S9

Embryo		SRR001337

Head		SRR001338

Head		SRR001339

Head		SRR001340

Head		SRR001341

Head		SRR001342

Head		SRR001343

Head		SRR001344

Head		SRR001345

Head		SRR001346

Head		SRR001347

Head		SRR001348

Head		SRR001349

Head		SRR001664

Head		SRR010951

Ovary		SRR010952

Ovary		SRR010953

Ovary		SRR010954

Ovary		SRR010955

Ovary		SRR010956

Ovary		SRR010957

Ovary		SRR010958

Ovary		SRR010959

Ovary		SRR010960

Ovary		SRR014268

Embryo		SRR014269

Embryo		SRR014270

Embryo		SRR014271

Embryo		SRR014272

Embryo		SRR014273

Ovary		SRR014274

Ovary		SRR014275

Ovary		SRR014276

Ovary		SRR014277

Ovary		SRR014278

Ovary		SRR014279

Ovary		SRR014280

Ovary		SRR014281

Ovary		SRR014282

Ovary		SRR023197

S2		SRR023399

S2		SRR023400

S2		SRR023402

S2		SRR023407

S2		SRR029028

S2		SRR029029

S2		SRR029030

S2		SRR029031

S2		SRR029032

S2		SRR029033

S2		SRR029608

Head		SRR029633

Head		SRR030145

gb3		SRR031692

Head		SRR031693

Head		SRR031694

Head		SRR031696

Head		SRR031697

Head		SRR031698

Head		SRR031699

Head		SRR031700

Head		SRR031701

Head		SRR031702

Head		SRR031703

Head		SRR031704

Head		SRR032092

S2		SRR032093

S2		SRR032094

S2		SRR032095

S2-NP		SRR032096

S2-NP		SRR032152

Head		SRR060643

Testis		SRR060644

Ovary		SRR060645

Testis		SRR060646

Ovary		SRR060647

Ovary		SRR060648

Ovary		SRR060649

Ovary		SRR060650

Testis		SRR060651

Ovary		SRR060652

Testis		SRR060653

Ovary		SRR065151

Ovary		SRR065152

Ovary		SRR065153

Ovary		SRR065154

Ovary		SRR065155

Ovary		SRR065800

Ovary		SRR065801

Ovary		SRR065802

Ovary		SRR065803

Ovary		SRR065804

Ovary		SRR065805

Ovary		SRR065806

Ovary		SRR065807

Ovary		SRR097865

S2-NP		SRR097866

S2-NP		SRR097867

S2-NP		SRR298536

Ovary		SRR298537

Ovary		SRR298711

Ovary		SRR298712

Ovary		SRR317110

Ovary		SRR317111

Ovary		SRR317112

Ovary		SRR317113

Ovary		SRR317114

Ovary		SRR317115

Ovary		SRR317116

Ovary		SRR317117

Ovary		SRR341115

S2		SRR341116

S2		SRR341117

S2		SRR341118

S2		SRR351332

Mixed-body		SRR351333

Mixed-body		T004

OSC		T005

CME-L1		V001

Embryo		V002

Embryo		V003

S2		V006

Female-body		V007

Head		V008

S2		V009

CME-L1		V010

ML-DmD20-C5		V011

Sg4		V012

Male-body		V013

Head		V014

DTT		V015

DreRFHV		V018

Kc167		V019

GM2		V020

S2-R+		V021

ML-DmD21		V022

ML-DmD32		V023

Head		V024

Kc167		V025

S2-R+		V026

1182-2H		V027

ML-DmD21		V028

CME-W1-Cl.8+		V029

ML-DmD9		V030

ML-DmD8		V031

GM2		V032

S1		V033

CME-W1-Cl.8+		V034

ML-DmD16-C3		V035

ML-DmD32		V036

ML-DmD20-C5		V037

S2		V038

S2		V063

Ovary		V0632

Ovary		V064

Ovary		V0642

Ovary		V065

Ovary		V0652

Ovary		V066

Ovary		V0662

Ovary		V067

S2-NP		V073

mbn2		V074

S3		V075

ML-DmBG1-C1		V076

ML-DmBG3-C2		V077

Head		V078

Head		V079

Head		V080

Head		V081

Embryo		V082

Embryo		V083

Male-body		V084

Female-body		V085

CME-W2		V086

Female-body		V088

Ovary		V0882

Ovary		V089

Ovary		V0892

Ovary		V090

Male-body		V091

fGS/OSS		V092

Male-body		V093

Male-body		V094

S2-R+		V095

S2-R+		V096

Ovary		V097

Ovary		V098

Ovary		V125

ML-DmD9		V126

CME-L1		V127

G2		V128

S3		V129

ML-DmBG1-C1		V130

ML-DmBG3-C2		V131

ML-DmD16-C3		V132

ML-DmD32		V133

Sg4		V134

ML-DmD8		V135

CME-W2		V136

Male-body		V137

Head		V138

Male-body		V139

Female-body		V140

Female-body		V141

Female-body		V142

Female-body		V144

OSC		V145

S2		V146

S1		V147

1182-2H		V148

mbn2		GSM1528798

follicle cells
..........................................................................................................TCTCGAATAGCGTTGTGACTGA........................................................................................................................221312350.00312350000084134331700000202183252302182722276132791746913103018611444146300441436102886281982176323655542734100092111600000000000000000106123108716472794539135948214362116561103655229224320325115108191873516157801220580571138011023416649019151100016106033753196410113378904618000101022301259329101313531267123161639210728089684517153142700403789194311881695148764521556442123313811101973171672420776155642510184101733541308341282101182182154159001432000526382174908568316461240962129229210542681616432271511841134338427992314181424275110858520401203941803634809813764332191643399636729489484530128542050018902423253721842805508103717302388504711841465725296214476232116993679036423017918749977138185431948936001457189914619892201530122525452214713354
..........................................................................................................TCTCGAATAGCGTTGTGACTG.........................................................................................................................21172067.0072067000020000010200000105555756001010820142149763211635259210810771202336913529116699220800041610000000000000000010118102124220020192011513581023161720002524041273172029029726020165126000520000101011190112001414117610000010000023898802511941342511141841892617922935549000107955892744162653400394651491201001117212500139940120553961279371628141193332000001007973075751368873497530561118891945001555101972291174362509623658722891353102876204089002013471115237502178263732860922124438827762843914503151162023065964413124151470006832029943220107373204019282043592261386260751962111949289722865983055171
..........................................................................................................TCTCGAATAGCGTTGTGACT..........................................................................................................................20124963.002496300000000010000000000612151301028521582711129331716002233018826171622440010200000000000000000012138514020100201421148201087520000601140041035020012241110228301183200003001002200010030111700000000000835770767135813523645614016836000103021058142280006105511003012418602012010041124797342153009111360000100081005936330201692212345444029165316008272739223356397206739541007913510326551313213971116331410881377482664021717150113414304686158187115060111597231586380611121100061917042580953173895901492216616854794250
..........................................................................................................TCTCGAATAGCGTTGTGACTGAA-TC....................................................................................................................2517737.007737000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000022305507000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................TCTCGAATAGCGTTGTGACTGAA-......................................................................................................................2317615.00761500000000000000000000815510000000000142112800278503221191611810000000000000000000000023031100731001126100157001000000220300016002020200032128000000000001016600100010522230000020000016920252091022411612800000030274211831001731714200001638310000000010035291150232057722740000186700980230710016001113504148000139273859014241344100611471183284511142521100001696134724917251721113955731712018439001373672884640342983050108729351913286243600011
..........................................................................................................TCTCGAATAGCGTTGTGACTGAG-......................................................................................................................2313303.00330300000000000000000000521500003000000022390010815134317413600001217100000000000000000020102002100022300215004315000000101100100501031500045000100000200001400100030237000000000001132019531354501010120000002560142815000230463800000224030210000000075583761443204200000000125041082305001411401193000102232242511440132580015363292120276103701126708302018192120101225176518359450041361953950500426718502451212171326391700001
..........................................................................................................TCTCGAATAGCGTTGTGACTGAA-A.....................................................................................................................2413221.00322100000011100000000000830000000000001323141001362118046231200000000000000000000000010006130400000000020001030000001000000000000000000000000000000000035000000502212000000000006120410020000020000005123241000011590000034551000000000001168481954238172000012001001000001003070020000311620221010035737919323657517300000731009740321014253878005300756555440001121902012601016318500000
..........................................................................................................TCTCGAATAGCGTTGTGACTGAT-......................................................................................................................2313002.0030020000000000000000000010120000000000012130025206009351100000000000000000000000320202001100102000127005060000000101001000303020002119000000000000004001000504500000000000257901714145215211633300000432131470001208240103013130020000000001618810315222448100000013380021000051002110120250053000722513270831342500154030641123042554000087101296471717131365182045160352900116145524851128637401623437367101073600005
.........................................................................................................................................................AGCGGCGAGGCTATTCAAGTAA.........................................................................2212286.002286000000000000000000002120003000000000011001013011002100009000000000000000000010002903110121831202011062020046812923469914461021340730908040000100000000000000021032140010000012030102723019001619112020025000120515651000601900000033000000623332122630000100000003201525243143371324408427230138144617126160010920322183031495017171815311113139211002003144009431647193240874302442236221021321912134160
..........................................................................................................TCTCGAATAGCGTTGTGA............................................................................................................................1811818.001818000000000000000000004512100453750001010000500100901100000000000000000000000011010000000000100110100110000000010000010200022000558002170000050000100000000010000000000051300910555375104533000001526261120050197000002200600000021071000000000000000050001052603101024204131000411582430136227014110455122236320200162182069121215166918211012142140020182717101452380131881955182800000
..........................................................................................................TCTCGAATAGCGTTGTGACTGC........................................................................................................................2211713.0017130000000000000000000033220000000000000040024460333081302241000000000000000000000000010000000000000001020021000000000000011090200010134805000110000000000300000031613000000000212229017302000010210000072223000003100000050000000000001001010024000010003101521584021008015073101006118715169381900838103240192115000027333410216721337397204214523000251480001311720404321011400000
..........................................................................................................TCTCGAATAGCGTTGTGACTATC-......................................................................................................................2321691.00338200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008862496000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................TCTCGAATAGCGTTGTGACTGT........................................................................................................................2211647.001647000000000000000000001010000000000000207002190115036109010000000000000000000000011101002000010160001200321100000000000000400010205130180002000000000010000000012000000000001410802811540617180000001652810003029020004600100000000012172613002140000790001013133002000170220417320056171312061980160091941918131610000032837866713151001210519100002296218010305065118428473111185112800010
..........................................................................................................TCTCGAATAGCGTTGTGACTGAT-C.....................................................................................................................2411423.00142300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000010000000000000000000000000100000000000000100000100002821125000000000000000000000000000000000000000101000000000001001000011000000001100000000100010000100000
...........................................................................................................CTCGAATAGCGTTGTGACTGA........................................................................................................................2111052.0010520000000000000000000000120004191190102000005200110301000000220000000000000000000000000000001100010500360000020000100000101020103052000300000500000000000300100000000000269002421515111113181118000000621332000101200000110310000000002117106311311000000001200103111300120120151000012924053118004163121312105000110231408856314045013200122912110005183408060943277000021
............................................................................................................TCGAATAGCGTTGTGACTGA........................................................................................................................2011030.001030000000000000000000007230000100000002193101010112114250000000000000000000000000001000000000011000100000000000000000000000000000000000000000000000000000050411000000000002801411633000100000056992000800900000070010000000001423101012750000000054000059080040130311000084141112051650330094310484013063700001423004201200150290161000026101500123253207552557221000000
..........................................................................................................TCTCGAATAGCGTTGTGAC...........................................................................................................................191997.009970000000000000000000001070000200000100220011000002000000000000000000000000000412100000000003000202000020000000000000001000000010040012210000030000400000000000000000000072830240222324108800000961200001019000100200100000010016440001120000010022000022007307014013000014226140710193300021314221200006423011824950222701690002111000021391308011147440221000025
...........................................................................................................CTCGAATAGCGTTGTGACTGAG-......................................................................................................................221808.008080000000000100000000000010008300000000210042001104240000001000000000000000000000000000100002000103000580000000000002000010100000010002000000000000000004021000000000009220122981521134191300000154212003038000002525600000010027754400314000000001100002100700120900430001261069013410150021001490000011961367615560000030120000441206002816300103984127141600000
..........................................................................................................TCTCGAATAGCGTTGTGACTGG........................................................................................................................221620.006200000000000000000000001010000000000000000011500111335001000000000000000000000000000100000000000000010040010000100000010000001010203200000000000000000100000000000000000017220140413030456000000161200000201000000150010000000001210100000000000001008003901300202001210010621023316007124132697260000121100337113115011007300021365001512300700110022200000
.........................................................................................................................................................AGCGGCGAGGCTATTCAAGTA..........................................................................211531.005310000100000000000000000000000107110000100000002200000100000000000000000000000001011002002012000412000312103500200001002701010100010000000000000001100001000000000004000750450120101413000601113003000104000000110000001320300000000000000000000002246021001400201000220132166420022700105200322028213323213200001230030217012811230606371073423063140
...........................................................................................................CTCGAATAGCGTTGTGACTG.........................................................................................................................201416.00416000000000000000000001002000620000000001000110000100000000000000000000000000000000000000000000000100000000000000000000101000100000000000000000000000000000100000000000953051398374245400000019403000030110000000001000000000711100002000000001000003600107060161000034010328300170032600000043422042211300113081000297100038120205864426300000
..........................................................................................................TCTCGAATAGCGTTGTGACTT.........................................................................................................................211366.003660000000000000000000001100000000000000100020020000010000000000000000000000000000000000000000000000000000000000000000002000001010260002000000000000000000000000000000003510140110000100000002002030010200000012000000000000101000000000002001100201270730140801051210001312034720000000200000001725020001250021307700010320012180123542200300000
..........................................................................................................TCTCGAATAGCGTTGTGACTGAA-AA....................................................................................................................251313.003130000000000000000000010000000000000200200011002102100100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002001000000000000101000000000000000000105000010000000680000000000000177410263500000000000000000000000000000000001001100045813165102000000000610000035800100041152000000110000003201000000
..........................................................................................................TCTCGAATAGCGTTGTGACTGAC-......................................................................................................................231307.0030700000000000000000000000000000000000001000110010061000000000000000000000000000000000000000000000000000000000000000000000102000001100000000000000000000000010000000000012020012000000000000100032000015000000000000000000022562200314000038001202000401001010002000003000353700124542705000012020043005130260081000318850104490406531110200000
..........................................................................................................TCTCGAATAGCGTTGTGACTGTT-......................................................................................................................231246.00246000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000100000000000000000100000000000002000000000000000000000000000000000000217000010020100000000510100001050000000000000000000030200000000000100000000110120201020100000111001200000020600000033020002074000220210000415800049120511736144345500000
..........................................................................................................TCTCGAATAGCGTTGTGACTGAA-T.....................................................................................................................241235.00235000000000000000000000000000000000001000000000100001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000340000000000000000001100100000000001000000000000000042000223000031143000000000000000000000000000130000100000005000000101002000000010104100003100000100101010101200000
............................................................................................................TCGAATAGCGTTGTGACTG.........................................................................................................................191213.00213000000000000000000000010000100000001100000111011002000000000000000000000000010000000000000000000000000000000000000000001000000000000000000000002000000000000000000000100021001201000000001303400030300000001000000000000411000000000000000000001402008030112000107020151140033044161200007122200002000011021000224300057130400351125200000
.............................................................................................................CGAATAGCGTTGTGACTGAG-GTA...................................................................................................................231191.001910000000000000000000000000000000000010000000000000000000000000000000000000000000000001000000000000000100000000000000000000000000000000000000000000000000000000000000000100100031001000000000001000000004000100000000000005430000210000000010000003010020300210001611203020000001117000000610112554130020110810000109300058140121121000400000
..........................................................................................................TCTCGAATAGCGTTGTGT............................................................................................................................181165.00165000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000101000000020000000000000000000000000000000000000036020200100481000000110000000010000000000100000000020000000000000000000010030010305011000022404033711000000000000001603110021230000202200000000000110201200000600000
..............................................................................................................GAATAGCGTTGTGACTGA........................................................................................................................181164.00164000000000000000000000100000100000000000000001000000000000000000000000000000011010000000000000000000000000000000000000000000000010001200000000000000000106300000000000150001121200100000005241000020100000000000000000000510000110000000000000000100000000000000000000012200224036192400001001000101000040011000000000020100000000000000028
..........................................................................................................TCTCGAATAGCGTTGTGACTGAT-T.....................................................................................................................241157.001570000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000002400000100000200000004013000107300000110000000000001610000130000000000000000030020000010003101100010000002190000001411010111000010072000082500017120303781205300000
.........................................................................................................................................................AGCGGCGAGGCTATTCAAGT...........................................................................201133.0013300000000000000000000110000001000008001000000000000000000000000000000000000000000000000010000000100000600106010000000000102000000100000000000000010000000000000000000054000010021001000020100000000000000000000000010100000000000000000000000000000000003000010000001000010000000100100012021000000000002000100411430201000410621151240030
.........................................................................................................ATCTCGAATAGCGTTGTGACTG.........................................................................................................................221132.0013200000000000000000000000100000000100000000000000000020000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000100000700000000000010012000000010000000000010000050000000100000000010041000000000000000000000040100101002000000002000210000001240100003211101302000042010000412310000350131043000000000
.............................................................................................................CGAATAGCGTTGTGACTGAG-GT....................................................................................................................221126.00126000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000060000001001000000000011000002000000000000000300002010010000012010002000130151101000030000013250010210510001127300000190202311000100000
.........................................................................................................ATCTCGAATAGCGTTGTGACTGA........................................................................................................................231117.001170000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001010000000000000000000000000000000000000000000000000000000000000000301000001000000000001001000101000000000000000000002110000200000000011000002000000000100001000201021000512347020000201003112110000001000026100001120200000000000000
..........................................................................................................TCTCGAATAGCGTTGTGACTGAT-A.....................................................................................................................241114.00114000000000000000000000000000000000000011001030100001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100100000000000000010010000100000001001100000000000000000000000000010210001500000200000100000100001000000000000001100013028121000002001050210023040000000119100000110000110000000000
........................................................................................................................................................CAGCGGCGAGGCTATTCAAGT...........................................................................211107.0010700000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000001000000000000001000000000000000000000000000020000100000000000000000000000000100000010000000000000000000000000000000000000000000000000000000000000012000100000000000000014005190000000100110000000000100001220014001010002853222221030
........................................................................................................................................................CAGCGGCGAGGCTATTCAAGTA..........................................................................221103.001030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000100000000000000000020000000000000000000000000000000000100000000000000000011010000000001000400001200001500519000000032111000300000000000048031300721221461100000000
................................................................................................................................G-GTAACTGCGCATCGAATCTACTC...............................................................................................241101.0010100000000000000000000000000001000000100000000000000000000100000000000000000000000000000010022005100001140000031101002000000000000000000000000000000101010000000000000004204000401111011000000000002000000000000000000000000072143101000000000000000000000000000100000000000000000000000000000000010001300000000110100000000000100000100000
.............................................................................................................CGAATAGCGTTGTGACTGA........................................................................................................................19196.009600000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000100010000000000000000000000000000000001010000020000000000221000000006000000200000000000020000000000000000000000000000000000000001001010530016214161500001000010100000020000000000000000100001000000000020
..........................................................................................................TCTCGAATAGCGTTGTGACTC.........................................................................................................................21193.00930000000000000000000000020000000000000000010000200010000000000000000000000000000000000000000000000000000000000000000000000101000010000000000000010000000000000000000001200000000010200000040020000000000000000000000000000000000000000000000000001000020000001000100300121000303211010000601101010031010003300003220001220300010101000000
...........................................................................................................CTCGAATAGCGTTGTGACT..........................................................................................................................19191.00910000000000000000000000000001000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000010100000200003000000000000000000000000000000003190042102201120000008010000000001200000000000000000200010000000000000000000000100000000000000001000400000012000000120000000200000002100002200002220010110000000000
..........................................................................................................TCTCGAATAGCGTTGTGACA..........................................................................................................................20191.00910000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000300001001000000000010110000001000000000000000000000100010000000020000000000000020100000000030000222000000380100102010100200200000143000031310000070100320301200000
..........................................................................................................TCTCGAATAGCGTTGTGACTA.........................................................................................................................21187.00870000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000101000000000000000000000000000000000000000002301200011001100000021021000000000000020000000000001100000010000511000000000001000000000000001100001100000005110000600000001200001002200011400002020101032100100000
............................................................................................................TCGAATAGCGTTGTGACTGAG-G.....................................................................................................................22186.00860000000000000000000000010000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000100001000000000000000002000000000000000000000000000000000000021000000000000010000000000002110000010000000000000002000000000010000020000021000307024000000000000010100001001000029240000020110002000200000
..........................................................................................................TCTCGAATAGCGTTGTGACTGAA-C.....................................................................................................................24184.008400000000000000000000000000000000000000000010000011100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000003510000100001038000000000000000000000000000000003000100204000000000002100001011100000001000000210000000000000000
..........................................................................................................................................................GCGGCGAGGCTATTCAAGTAA.........................................................................21182.0082000000000000000000000000000000000000000000100000000000000000000000000000000000000000200100300001300003003404210000000000000000000000000000000000000000020000000000000300400010201040000006010000000000000000000000401000000000000000000000000000100000010010001010001000000020002000000000001000000100020000002000200100000211020000000
...........................................................................................................CTCGAATAGCGTTGTGACTGAG-G.....................................................................................................................23177.00770000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000100010004000000000002000000000000000000000000002200000000000000000000014000000100000000121010400000000003000000402000010500000001000015010051510011011000000000
............................................................................................................TCGAATAGCGTTGTGACT..........................................................................................................................18176.0076000000000000000000000110000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000001000000000000000000000000000000000000100000000000000001000100000000101000000000000000210000001000000000000001002001020030000004130033300000034010000101000001000200000200002330004110011030010200000
..........................................................................................................TCTCGAATAGCGTTGTGACTGAG-A.....................................................................................................................24175.0075000000000000000000000000000000000000000000000000100100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000100100110000001020100000000000001000000000000114110003000001000000000000000010010000000010013100000125030000002001000000002002000227001000170111010001000000
..........................................................................................................TCTCGAATAGCGTTGTGAT...........................................................................................................................19174.00740000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000001270031000001301000000000000000000000000000000000000100000000000000000000001000101010000000001100010000000000000000101110000100000001000000000002100100316001600000
..........................................................................................................................................................GCGGCGAGGCTATTCAAGTAAA........................................................................22172.0072000000000000000000000010000000000000000000000000000000000000000000000000000000000000000100000001300010019623000000000000000000022000000000000000000000040000000000000220100000002000000001000000000000000020000000030000000000000000100000002000000000000000000000001000000010014000010100000000000000001000114000000300000100000000000
droSim2
TTTT--CCATAGGAGTC------------------------------GGATAGGTCGTGGTTTTAGCCACGCAGAGGACACA----------CCTGAAATTACCCATCTCGAATAGCGTTGTGACTGAG-GTAACTGCGCATCGAATCTACTCAGCGGCGAGGCTATTCCAGTAAGGTTGTTTTGGGCCA-GCGACTTT--ATGACCGGAAAACAAGGGTGTTAA-----------------------SizeHit CountTotal NormTotalM023

Head		M024

Male-body		M025

Embryo		M053

Female-body		O001

Testis		O002

Head		SRR553485

Ovary		SRR553486

Ovary		SRR553487

Ovary		SRR553488

Ovary		SRR618934

Ovary		V044

Embryo		SRR902008

Ovary		SRR902009

Testis		SRR1275487

Male larvae		SRR1275485

Male prepupae		SRR1275483

Male prepupae
..........................................................................................................TCTCGAATAGCGTTGTGACTGA........................................................................................................................221207436.00207436944614362215909669973225012674791364435392530444186314150341990
..........................................................................................................TCTCGAATAGCGTTGTGACT..........................................................................................................................20191812.0091812662342146213046615038911773673571893811454019
..........................................................................................................TCTCGAATAGCGTTGTGACTGG........................................................................................................................22129390.0029390158239550399510031213018002
..........................................................................................................TCTCGAATAGCGTTGTGACTG.........................................................................................................................21122214.002221435301684255195195519511128312045120695704163924242688
..........................................................................................................TCTCGAATAGCGTTGTGACTGAA-......................................................................................................................23110889.00108893283139415092200924889142211274513134126001
..........................................................................................................TCTCGAATAGCGTTGTGACC..........................................................................................................................2018218.0082186515158212000010000000000
..........................................................................................................TCTCGAATAGCGTTGTGAC...........................................................................................................................1914347.004347217672413983667499424192130162411
..........................................................................................................TCTCGAATAGCGTTGTGACTGAA-A.....................................................................................................................2414131.00413118790500230064065511607244112945000
..........................................................................................................TCTCGAATAGCGTTGTGACG..........................................................................................................................2011977.00197712756624000000000000000
..........................................................................................................TCTCGAATAGCGTTGTGACTGT........................................................................................................................2211139.00113971520931100604681201749000
..........................................................................................................TCTCGAATAGCGTTGTGACTGAT-......................................................................................................................2311138.0011385051875960095786050402073001
..........................................................................................................TCTCGAATAGCGTTGTGACTGAG-......................................................................................................................231909.0090927622794213245340495273564000
..........................................................................................................TCTCGAATAGCGTTGTGACTGAA-AA....................................................................................................................251576.005766250600971111899232180000
..........................................................................................................TCTCGAATAGCGTTGTGA............................................................................................................................181362.00362571930611573012776000012
..........................................................................................................TCTCGAATAGCGTTGTGACTGTT-......................................................................................................................231332.0033226855200061000000000
..........................................................................................................TCTCGAATAGCGTTGTGACTGAC-......................................................................................................................231293.0029314941441002020750042000
..........................................................................................................TCTCGAATAGCGTTGTGACTGC........................................................................................................................221281.0028120541900087730001000
...........................................................................................................CTCGAATAGCGTTGTGACTGA........................................................................................................................211207.0020757271049811743100027003
..........................................................................................................TCTCGAATAGCGTTGTGACTGAT-T.....................................................................................................................241152.0015210228200087211001000
............................................................................................................TCGAATAGCGTTGTGACTGA........................................................................................................................20181.0081358540076312217000
...........................................................................................................CTCGAATAGCGTTGTGACT..........................................................................................................................19177.00774417123720000001000
..........................................................................................................TCTCGAATAGCGTTGTGACA..........................................................................................................................20177.00774816200014110004000
..........................................................................................................TCTCGAATAGCGTTGTGACTT.........................................................................................................................21166.00664413010021010004000
.........................................................................................................................................................AGCGGCGAGGCTATTCCAGTAA.........................................................................22163.00630000007613404128000
..........................................................................................................TCTCGAATAGCGTTGTGACTGAT-A.....................................................................................................................24163.0063802000121714100000000
...........................................................................................................CTCGAATAGCGTTGTGACTGAG-......................................................................................................................22152.00521312003712471002000
..........................................................................................................TCTCGAATAGCGTTGTGACTGAG-A.....................................................................................................................24150.0050179800053521000000
..............................................................................................................GAATAGCGTTGTGACTGA........................................................................................................................18148.0048127402112149014000
...........................................................................................................CTCGAATAGCGTTGTGACTG.........................................................................................................................20145.00455501112022300013001
..........................................................................................................TCTCGAATAGCGTTGTG.............................................................................................................................17140.00400000001752412000000
................................................................................................................ATAGCGTTGTGACTGA........................................................................................................................16137.0037000000000136000000
............................................................................................................TCGAATAGCGTTGTGACT..........................................................................................................................18137.0037277000010101000000
..........................................................................................................TCTCGAATAGCGTTGTGACTGAC-A.....................................................................................................................24133.0033111000813321030000
.........................................................................................................ATCTCGAATAGCGTTGTGACTGA........................................................................................................................23130.0030911000200001016000
..........................................................................................................TCTCGAATAGCGTTGTGACTA.........................................................................................................................21129.0029104100034301003000
.............................................................................................................CGAATAGCGTTGTGACTGA........................................................................................................................19122.002234101000117004000
..........................................................................................................TCTCGAATAGCGTTGTGG............................................................................................................................18121.0021128100000000000000
.........................................................................................................................................................AGCGGCGAGGCTATTCCAGTA..........................................................................21119.001900000002321119000
............................................................................................................TCGAATAGCGTTGTGACTGAG-G.....................................................................................................................22119.001945000021420010000
..........................................................................................................TCTCGAATAGCGTTGTGACTGAA-C.....................................................................................................................24118.001830700002230010000
..........................................................................................................TCTCGAATAGCGTTGTGACTGAA-T.....................................................................................................................24118.001860400041120000000
..........................................................................................................TCTCGAATAGCGTTGTGACTGAG-T.....................................................................................................................24117.001762100010140011000
...........................................................................................................CTCGAATAGCGTTGTGAC...........................................................................................................................18116.001633004500000000001
...........................................................................................................CTCGAATAGCGTTGTGACTGG........................................................................................................................21115.001559100000000000000
..........................................................................................................TCTCGAATAGCGTTGTGACTGAT-AA....................................................................................................................25115.001500100010850000000
.............................................................................................................CGAATAGCGTTGTGACTGAG-GT....................................................................................................................22114.001484001010000000000
..........................................................................................................TCTCGAATAGCGTTGTGACTGAG-G.....................................................................................................................24114.001453400100000010000
.........................................................................................................ATCTCGAATAGCGTTGTGACTG.........................................................................................................................22114.001450100012201002000
..........................................................................................................TCTCGAATAGCGTTGTGACTTG........................................................................................................................22114.001475200000000000000
.............................................................................................................CGAATAGCGTTGTGACTGAG-GTA...................................................................................................................23114.0014101000100010010000
.............................................................................................................CGAATAGCGTTGTGACTGAG-G.....................................................................................................................21113.001337001020000000000
............................................................................................................TCGAATAGCGTTGTGACTGG........................................................................................................................20113.001392200000000000000
..........................................................................................................TCTCGAATAGCGTTGTGACTTT........................................................................................................................22111.0011101000000000000000
............................................................................................................TCGAATAGCGTTGTGACTG.........................................................................................................................19110.001010010022210001000
..........................................................................................................TCTCGAATAGCGTTGTGACTGGT-......................................................................................................................23110.001051400000000000000
...........................................................................................................CTCGAATAGCGTTGTGACTGAA-......................................................................................................................2219.00942120000000000000
..........................................................................................................TCTCGAATAGCGTTGTGAAA..........................................................................................................................2019.00981000000000000000
...............................................................................................................AATAGCGTTGTGACTGA........................................................................................................................1719.00900000011016000000
..........................................................................................................TCTCGAATAGCGTTGTGACTGTA-......................................................................................................................2319.00942000001110000000
..........................................................................................................TCTCGAATAGCGTTGTGACTGAC-AA....................................................................................................................2518.00820000010100040000
..........................................................................................................................................................GCGGCGAGGCTATTCCAGTAAA........................................................................2218.00810000012130000000
..........................................................................................................TCTCGAATAGCGTTGTGACTGAA-AC....................................................................................................................2517.00700000012210010000
..........................................................................................................TCTCGAATAGCGTTGTGACTGAC-T.....................................................................................................................2416.00630000001100001000
................................................................................................................ATAGCGTTGTGACTG.........................................................................................................................1516.00600000000006000000
..........................................................................................................TCTCGAATAGCGTTGTGACTC.........................................................................................................................2115.00501000010000003000
..........................................................................................................................................................GCGGCGAGGCTATTCCAGTAA.........................................................................2115.00500000010310000000
.................................................................................................................TAGCGTTGTGACTGA........................................................................................................................1515.00500000012101000000
.........................................................................................................................................................AGCGGCGAGGCTATTCCAGTAAA........................................................................2315.00500000000400001000
droSec2
TTTT--CCATAGTAGTT------------------------------GGATAGGTCGTGGTTTTAGCCACGCAGAGGACACA----------CCTGAAATTACCCATCTCGAATAGCGTTGTGACTGAG-GTAACTGCGCATCGAATCTACTCAGCGGCGAGGCTATTCCAGTAAGGTTGTTTTGGGCCA-GCGACTTT--ATGACCGGAAAACAAGGGTGTTAA-----------------------SizeHit CountTotal NormTotalM054

Female-body		V113

Male-body		V114

Embryo		V115

Head
..........................................................................................................TCTCGAATAGCGTTGTGACTGA........................................................................................................................22130646.0030646147041123815163188
..........................................................................................................TCTCGAATAGCGTTGTGACTG.........................................................................................................................2119539.009539333843992471555
..........................................................................................................TCTCGAATAGCGTTGTGACT..........................................................................................................................2012994.002994925151946504
...........................................................................................................CTCGAATAGCGTTGTGACTGA........................................................................................................................2111246.00124612152425
..........................................................................................................TCTCGAATAGCGTTGTGACTGAA-......................................................................................................................231330.003301401103149
...........................................................................................................CTCGAATAGCGTTGTGACTG.........................................................................................................................201279.002792651004
..........................................................................................................TCTCGAATAGCGTTGTGACTGT........................................................................................................................221234.0023488119324
..........................................................................................................TCTCGAATAGCGTTGTGACTGAG-......................................................................................................................231195.0019596541629
..........................................................................................................TCTCGAATAGCGTTGTGACTGAT-......................................................................................................................231171.001718561520
............................................................................................................TCGAATAGCGTTGTGACTGA........................................................................................................................201103.001037010419
...........................................................................................................CTCGAATAGCGTTGTGACTGAG-......................................................................................................................22181.0081512415
...........................................................................................................CTCGAATAGCGTTGTGACT..........................................................................................................................19165.006562102
..........................................................................................................TCTCGAATAGCGTTGTGA............................................................................................................................18158.0058429520
..........................................................................................................TCTCGAATAGCGTTGTGACTT.........................................................................................................................21155.0055391006
..........................................................................................................TCTCGAATAGCGTTGTGACTGTT-......................................................................................................................23139.003932709
..........................................................................................................TCTCGAATAGCGTTGTGACTGAA-A.....................................................................................................................24137.0037131212
..........................................................................................................TCTCGAATAGCGTTGTGAC...........................................................................................................................19135.0035213110
..........................................................................................................TCTCGAATAGCGTTGTGACTGC........................................................................................................................22130.003031908
............................................................................................................TCGAATAGCGTTGTGACTG.........................................................................................................................19129.002915329
.........................................................................................................................................................AGCGGCGAGGCTATTCCAGTAA.........................................................................22125.00257828
..........................................................................................................TCTCGAATAGCGTTGTGACTGG........................................................................................................................22121.002111604
.........................................................................................................................................................AGCGGCGAGGCTATTCCAGTA..........................................................................21118.00182817
.............................................................................................................CGAATAGCGTTGTGACTGA........................................................................................................................19116.001614200
...........................................................................................................CTCGAATAGCGTTGTGACTGAA-......................................................................................................................22115.001515000
..........................................................................................................TCTCGAATAGCGTTGTGACTGAT-T.....................................................................................................................24114.00144802
..........................................................................................................TCTCGAATAGCGTTGTGACTGAC-......................................................................................................................23112.00128220
...........................................................................................................CTCGAATAGCGTTGTGACTGG........................................................................................................................21112.001212000
.........................................................................................................ATCTCGAATAGCGTTGTGACTGA........................................................................................................................23112.001212000
...........................................................................................................CTCGAATAGCGTTGTGACTGT........................................................................................................................21111.00119101
............................................................................................................TCGAATAGCGTTGTGACT..........................................................................................................................18111.00117202
.............................................................................................................CGAATAGCGTTGTGACTGAG-GT....................................................................................................................2219.0093501
.........................................................................................................................................................AGCGGCGAGGCTATTCCAGT...........................................................................2019.0094500
..........................................................................................................TCTCGAATAGCGTTGTGACTA.........................................................................................................................2118.0083401
.............................................................................................................CGAATAGCGTTGTGACTGAG-G.....................................................................................................................2117.0071501
.............................................................................................................CGAATAGCGTTGTGACTGAG-GTA...................................................................................................................2317.0073301
..........................................................................................................TCTCGAATAGCGTTGTGAT...........................................................................................................................1917.0072203
..........................................................................................................TCTCGAATAGCGTTGTGACTGAA-AA....................................................................................................................2516.0064110
..........................................................................................................TCTCGAATAGCGTTGTGTT...........................................................................................................................1925.50115303
..............................................................................................................GAATAGCGTTGTGACTGA........................................................................................................................1815.0054001
................................................................................................................................G-GTAACTGCGCATCGAATCTACT................................................................................................2315.0055000
.........................................................................................................ATCTCGAATAGCGTTGTGACTG.........................................................................................................................2215.0052102
..........................................................................................................TCTCGAATAGCGTTGTGT............................................................................................................................1815.0050005
...........................................................................................................CTCGAATAGCGTTGTGACTGAG-G.....................................................................................................................2315.0052120
..........................................................................................................TCTCGAATAGCGTTGTGACA..........................................................................................................................2015.0052210
..........................................................................................................TCTCGAATAGCGTTGTGACC..........................................................................................................................2015.0050401
..........................................................................................................TCTCGAATAGCGTTGTGACTGAG-GTC...................................................................................................................2614.0040400
..........................................................................................................TCTCGAATAGCGTTGTGACTTT........................................................................................................................2214.0042200
..........................................................................................................TCTCGAATAGCGTTGTGACTGAG-A.....................................................................................................................2414.0040310
.............................................................................................................CGAATAGCGTTGTGACTG.........................................................................................................................1814.0044000
..........................................................................................................................................................GCGGCGAGGCTATTCCAGTAA.........................................................................2114.0044000
.........................................................................................................................................................AGCGGCGAGGCTATTCCAG............................................................................1914.0040004
............................................................................................................TCGAATAGCGTTGTGACTGAG-G.....................................................................................................................2214.0041300
..........................................................................................................TCTCGAATAGCGTTGTGACTGAG-T.....................................................................................................................2414.0042200
...........................................................................................................CTCGAATAGCGTTGTGACTGAT-......................................................................................................................2214.0044000
............................................................................................................TCGAATAGCGTTGTGACTGAG-......................................................................................................................2114.0043001
..........................................................................................................TCTCGAATAGCGTTGTGACTGAC-TC....................................................................................................................2513.0030201
..........................................................................................................TCTCGAATAGCGTTGTGACTGTT-T.....................................................................................................................2413.0032100
..........................................................................................................TCTCGAATAGCGTTGTGACTGAA-T.....................................................................................................................2413.0032100
..........................................................................................................TCTCGAATAGCGTTGTGACTGAG-G.....................................................................................................................2413.0032001
...........................................................................................................CTCGAATAGCGTTGTGACTGAG-T.....................................................................................................................2313.0033000
..........................................................................................................TCTCGAATAGCGTTGTGAA...........................................................................................................................1913.0032001
.............................................................................................................CGAATAGCGTTGTGACTGAG-GTT...................................................................................................................2313.0031101
.........................................................................................................ATCTCGAATAGCGTTGTGACT..........................................................................................................................2113.0032100
..........................................................................................................TCTCGAATAGCGTTGTGACG..........................................................................................................................2012.0022000
.......................................................................................................................................................TCAGCGGCGAGGCTATTCCAG............................................................................2112.0021001
...........................................................................................................CTCGAATAGCGTTGTGACTGAC-......................................................................................................................2212.0022000
...........................................................................................................CTCGAATAGCGTTGTGACTT.........................................................................................................................2012.0022000
..........................................................................................................TCTCGAATAGCGTTGTGACTC.........................................................................................................................2112.0021001
...........................................................................................................CTCGAATAGCGTTGTGACTTG........................................................................................................................2111.0011000
..........................................................................................................TCTCGAATAGCGTTGTGACCT.........................................................................................................................2111.0010100
droYak3
TTTT--CAATAGAACTC------------------------------GGAAAAGTCGTTGTTTTAGAAACGCAGAGGACACA----------CCTAAAATTACCCATCTCGAATAGCGTTGTGACTGAG-GTAACTGCGCATCGTATCTACTCAGCGGCGAAGCTATTCCAGTAAGGTTATTTTGGGCCA-GCGACTTT--ACGACCGGAAAACAAGGGTGTTAA-----------------------SizeHit CountTotal NormTotalM026

Head		M043

Female-body		M056

Embryo		V046

Embryo		V052

Head		V058

Head		V120

Male-body		SRR1275488

Male larvae		SRR1275486

Male prepupae		SRR1275484

Male prepupae		GSM1528802

follicle cells
..........................................................................................................TCTCGAATAGCGTTGTGACTGA........................................................................................................................22114537.0014537974917451770176167282605311425
..........................................................................................................TCTCGAATAGCGTTGTGACT..........................................................................................................................2012407.00240721121116101326830010
..........................................................................................................TCTCGAATAGCGTTGTGACTGG........................................................................................................................2211878.001878186311210100000
..........................................................................................................TCTCGAATAGCGTTGTGACTG.........................................................................................................................2111077.001077231388813044702177270
..........................................................................................................TCTCGAATAGCGTTGTGACTGAA-......................................................................................................................231443.004433163764434150000
..........................................................................................................TCTCGAATAGCGTTGTGACC..........................................................................................................................201283.0028325602700000000
..........................................................................................................TCTCGAATAGCGTTGTGAC...........................................................................................................................191270.00270129512301102018
...........................................................................................................CTCGAATAGCGTTGTGACTGA........................................................................................................................211175.0017514156300020000
..........................................................................................................TCTCGAATAGCGTTGTGACTGT........................................................................................................................22188.00885415311590000
..........................................................................................................TCTCGAATAGCGTTGTGACTGAT-......................................................................................................................23186.008638177014300016
..........................................................................................................TCTCGAATAGCGTTGTGACTGAA-A.....................................................................................................................24162.006215113240000000
..........................................................................................................TCTCGAATAGCGTTGTGACG..........................................................................................................................20148.0048480000000000
...........................................................................................................CTCGAATAGCGTTGTGACTGAG-......................................................................................................................22147.00471323202250000
..........................................................................................................TCTCGAATAGCGTTGTGACTGC........................................................................................................................22138.00381525101410000
...........................................................................................................CTCGAATAGCGTTGTGACTG.........................................................................................................................20135.0035133000010000
..........................................................................................................TCTCGAATAGCGTTGTGACTGAG-......................................................................................................................23133.0033158700030000
..........................................................................................................TCTCGAATAGCGTTGTGACTGAC-......................................................................................................................23128.0028212400100000
..........................................................................................................TCTCGAATAGCGTTGTGACTGTT-......................................................................................................................23121.0021141000240000
............................................................................................................TCGAATAGCGTTGTGACTGA........................................................................................................................20118.0018213001110000
..........................................................................................................TCTCGAATAGCGTTGTGACTGAG-G.....................................................................................................................24111.001121000000008
............................................................................................................TCGAATAGCGTTGTGACTGAG-G.....................................................................................................................22110.001032310010000
..........................................................................................................TCTCGAATAGCGTTGTGA............................................................................................................................1819.00921011210100
..........................................................................................................TCTCGAATAGCGTTGTGACTGAT-T.....................................................................................................................2419.00951100020000
...........................................................................................................CTCGAATAGCGTTGTGACT..........................................................................................................................1918.00844000000000
.........................................................................................................................................................AGCGGCGAAGCTATTCCAGTAA.........................................................................2216.00601130100000
..........................................................................................................TCTCGAATAGCGTTGTGACTGAA-AA....................................................................................................................2516.00601400010000
...........................................................................................................CTCGAATAGCGTTGTGACTGG........................................................................................................................2116.00660000000000
..........................................................................................................TCTCGAATAGCGTTGTGACTGAA-C.....................................................................................................................2414.00411200000000
.............................................................................................................CGAATAGCGTTGTGACTGAG-GT....................................................................................................................2214.00421000010000
..........................................................................................................TCTCGAATAGCGTTGTGACTGAA-T.....................................................................................................................2414.00412100000000
..........................................................................................................TCTCGAATAGCGTTGTGACTT.........................................................................................................................2114.00430001000000
.............................................................................................................CGAATAGCGTTGTGACTGA........................................................................................................................1914.00422000000000
.........................................................................................................................................................AGCGGCGAAGCTATTCCAGTA..........................................................................2113.00302010000000
...........................................................................................................CTCGAATAGCGTTGTGACTGAT-......................................................................................................................2213.00303000000000
............................................................................................................TCGAATAGCGTTGTGACTG.........................................................................................................................1913.00302000010000
.........................................................................................................ATCTCGAATAGCGTTGTGACTG.........................................................................................................................2213.00311100000000
.............................................................................................................CGAATAGCGTTGTGACTGAG-G.....................................................................................................................2113.00301000020000
..........................................................................................................TCTCGAATAGCGTTGTGACTGAG-GT....................................................................................................................2513.00320100000000
..........................................................................................................TCTCGAATAGCGTTGTGACTA.........................................................................................................................2113.00310001010000
..............................................................................................................GAATAGCGTTGTGACTGA........................................................................................................................1813.00312000000000
...........................................................................................................CTCGAATAGCGTTGTGAC...........................................................................................................................1812.00202000000000
..........................................................................................................................................................GCGGCGAAGCTATTCCAGTAA.........................................................................2112.00202000000000
..........................................................................................................................................................GCGGCGAAGCTATTCCAGTAAA........................................................................2212.00202000000000
..........................................................................................................TCTCGAATAGCGTTGTGACTGTC-T.....................................................................................................................2412.00220000000000
...........................................................................................................CTCGAATAGCGTTGTGACTGAA-......................................................................................................................2212.00202000000000
.............................................................................................................CGAATAGCGTTGTGACTGAG-......................................................................................................................2012.00200000020000
..........................................................................................................................................................GCGGCGAAGCTATTCCAGTAAG........................................................................2212.00201100000000
.........................................................................................................ATCTCGAATAGCGTTGTGACTGA........................................................................................................................2311.00101000000000
............................................................................................................TCGAATAGCGTTGTGACTGAG-GTAACT................................................................................................................2711.00100000010000
...........................................................................................................CTCGAATAGCGTTGTGACTGAG-GG....................................................................................................................2411.00110000000000
..........................................................................................................TCTCGAATAGCGTTGTGACTGAC-A.....................................................................................................................2411.00100100000000
..........................................................................................................TCTCGAATAGCGTTGTGACTGAG-GTAACC................................................................................................................2911.00110000000000
.........................................................................................................................................................AGCGGCGAAGCTATTCCAGTAAA........................................................................2311.00101000000000
.....................................................................................................................................................ACTCAGCGGCGAAGCTATTCCA.............................................................................2211.00100000010000
............................................................................................................TCGAATAGCGTTGTGACTGAG-GT....................................................................................................................2311.00100100000000
..........................................................................................................TCTCGAATAGCGTTGTGACTCG........................................................................................................................2211.00110000000000
..........................................................................................................TCTCGAATAGCGTTGTGACTGAG-T.....................................................................................................................2411.00110000000000
..........................................................................................................TCTCGAATAGCGTTGTGACTGCC-......................................................................................................................2311.00100000100000
..........................................................................................................................................................GCGGCGAAGCTATTCCAGTAAGC.......................................................................2311.00100100000000
..........................................................................................................TCTCGAATAGCGTTGTGACTGTT-T.....................................................................................................................2411.00110000000000
...........................................................................................................................................................CGGCGAAGCTATTCCAGTA..........................................................................1911.00101000000000
...................................................................................................................................................CTACTCAGCGGCGAAGCTATTCCA.............................................................................2411.00101000000000
.............................................................................................................CGAATAGCGTTGTGACTGAT-T.....................................................................................................................2111.00100000100000
.........................................................................................................ATCTCGAATAGCGTTGTGACT..........................................................................................................................2111.00101000000000
droEre2
TTTT--CCATACAAGTC------------------------------GGAAAAGTCGTACTTTTAGATAC------GAGATA----------CCTAAGATTACCCATCTCGAATAGCGTTGTGACTGAG-GTAACTGCGCATCGAATCTACTCAGCGGCAAGGCTATTCCAGTAAGGTTATTTTGGGCCA-GCGACTCA--ACGACCGGAAAACAGGGGTGTTAACTATCAGGTAATGGGGCTGCTGGSizeHit CountTotal NormTotalM055

Female-body		M057

Embryo		V060

Head		V040

Embryo		V107

Male-body		V108

Head		GSM1528801

follicle cells
..........................................................................................................TCTCGAATAGCGTTGTGACTG.........................................................................................................................2112879.00287915461943879442400
..........................................................................................................TCTCGAATAGCGTTGTGACTGA........................................................................................................................2212833.002833156412635132676157143
..........................................................................................................TCTCGAATAGCGTTGTGACT..........................................................................................................................2012625.002625119941391710243023
...........................................................................................................CTCGAATAGCGTTGTGACTG.........................................................................................................................201323.00323200030110100
...........................................................................................................CTCGAATAGCGTTGTGACTGAG-......................................................................................................................221303.00303144032123238
...........................................................................................................CTCGAATAGCGTTGTGACTGA........................................................................................................................211219.0021916001038416
.............................................................................................................CGAATAGCGTTGTGACTGAG-G.....................................................................................................................211171.001717311084120
...........................................................................................................CTCGAATAGCGTTGTGACT..........................................................................................................................191120.00120830003430
.............................................................................................................CGAATAGCGTTGTGACTGAG-GTA...................................................................................................................231114.00114441215970
..........................................................................................................TCTCGAATAGCGTTGTGAC...........................................................................................................................191109.001095316213430
.............................................................................................................CGAATAGCGTTGTGACTGAG-GT....................................................................................................................22195.00952802250121
..........................................................................................................TCTCGAATAGCGTTGTGACTGAT-......................................................................................................................23158.00581400010034
..........................................................................................................TCTCGAATAGCGTTGTGACTGAG-......................................................................................................................23157.005781026238
..........................................................................................................TCTCGAATAGCGTTGTGACTT.........................................................................................................................21149.0049261311530
..........................................................................................................TCTCGAATAGCGTTGTGA............................................................................................................................18144.0044180029150
..........................................................................................................TCTCGAATAGCGTTGTGACTGAA-......................................................................................................................23136.00361110010410
..........................................................................................................TCTCGAATAGCGTTGTGACTGT........................................................................................................................22126.0026120021110
.........................................................................................................................................................AGCGGCAAGGCTATTCCAGTAA.........................................................................22125.002516400410
......................................................................................................................................................CTCAGCGGCAAGGCTATTCCAG............................................................................22125.002550031340
.............................................................................................................CGAATAGCGTTGTGACTGAG-......................................................................................................................20122.002230101530
............................................................................................................TCGAATAGCGTTGTGACTG.........................................................................................................................19115.001510001310
............................................................................................................TCGAATAGCGTTGTGACTGA........................................................................................................................20114.001413000010
........................................................................................................................................................CAGCGGCAAGGCTATTCCAGTA..........................................................................22114.00146000620
..........................................................................................................TCTCGAATAGCGTTGTGACA..........................................................................................................................20112.00123000630
.............................................................................................................CGAATAGCGTTGTGACTGAG-GTT...................................................................................................................23110.00103000610
..........................................................................................................TCTCGAATAGCGTTGTGACC..........................................................................................................................2019.0091600200
............................................................................................................TCGAATAGCGTTGTGACT..........................................................................................................................1819.0093000420
......................................................................................................................................................CTCAGCGGCAAGGCTATTCCA.............................................................................2119.0090001800
............................................................................................................TCGAATAGCGTTGTGACTGAG-......................................................................................................................2119.0098000100
...........................................................................................................CTCGAATAGCGTTGTGACTGTT-......................................................................................................................2219.0090000630
...........................................................................................................CTCGAATAGCGTTGTGAC...........................................................................................................................1818.0087000100
.........................................................................................................................................................AGCGGCAAGGCTATTCCAGT...........................................................................2017.0074010200
...........................................................................................................CTCGAATAGCGTTGTGACTT.........................................................................................................................2017.0072000500
........................................................................................................................................................CAGCGGCAAGGCTATTCCAGT...........................................................................2117.0072000500
.......................................................................................................................................................TCAGCGGCAAGGCTATTCCAG............................................................................2117.0072001310
.............................................................................................................CGAATAGCGTTGTGACTG.........................................................................................................................1817.0073000310
...........................................................................................................CTCGAATAGCGTTGTGACTGT........................................................................................................................2117.0074000210
..........................................................................................................TCTCGAATAGCGTTGTGACTGG........................................................................................................................2217.0075001010
..........................................................................................................TCTCGAATAGCGTTGTGACTGTT-......................................................................................................................2317.0071000420
...........................................................................................................CTCGAATAGCGTTGTGACTTT........................................................................................................................2117.0072000500
.............................................................................................................CGAATAGCGTTGTGACTGA........................................................................................................................1917.0074001200
..............................................................................................................GAATAGCGTTGTGACTGAG-G.....................................................................................................................2016.0065000100
..........................................................................................................TCTCGAATAGCGTTGTGAA...........................................................................................................................1916.0063000300
..........................................................................................................................................................GCGGCAAGGCTATTCCAGTAAA........................................................................2215.0054100000
..........................................................................................................TCTCGAATAGCGTTGTGT............................................................................................................................1815.0051010300
..........................................................................................................TCTCGAATAGCGTTGTGACTGAC-......................................................................................................................2315.0051000103
.......................................................................................................................................................TCAGCGGCAAGGCTATTCCAGT...........................................................................2215.0052000300
............................................................................................................TCGAATAGCGTTGTGACTGAG-G.....................................................................................................................2214.0042000200
.........................................................................................................................................................AGCGGCAAGGCTATTCCAGTA..........................................................................2114.0041100200
..........................................................................................................TCTCGAATAGCGTTGTGAT...........................................................................................................................1914.0044000000
.............................................................................................................CGAATAGCGTTGTGACTGAG-GTTT..................................................................................................................2414.0041000300
..........................................................................................................TCTCGAATAGCGTTGTGACTGAT-T.....................................................................................................................2414.0041000300
.........................................................................................................ATCTCGAATAGCGTTGTGACTG.........................................................................................................................2214.0041011100
.............................................................................................................CGAATAGCGTTGTGACTGAG-GTAT..................................................................................................................2413.0031000200
.............................................................................................................CGAATAGCGTTGTGACTGTT-......................................................................................................................2013.0031000200
..........................................................................................................TCTCGAATAGCGTTGTGACTTT........................................................................................................................2213.0032000100
..........................................................................................................................................................GCGGCAAGGCTATTCCAGTAA.........................................................................2113.0032100000
...........................................................................................................CTCGAATAGCGTTGTGACTGAG-T.....................................................................................................................2313.0032000100
..........................................................................................................TCTCGAATAGCGTTGTGACTGAA-A.....................................................................................................................2413.0031000200
..........................................................................................................TCTCGAATAGCGTTGTGTT...........................................................................................................................1932.3374000210
..........................................................................................................TCTCGAATAGCGTTGTGACTGGA-......................................................................................................................2312.0021000100
..............................................................................................................GAATAGCGTTGTGACTGAG-GTA...................................................................................................................2212.0021000100
.............................................................................................................CGAATAGCGTTGTGACTGTT-T.....................................................................................................................2112.0020000200
...........................................................................................................CTCGAATAGCGTTGTGACTGTT-T.....................................................................................................................2312.0020000200
......................................................................................................................................................CTCAGCGGCAAGGCTATTCCAGT...........................................................................2312.0020000200
..........................................................................................................................................................GCGGCAAGGCTATTCCAGTAAT........................................................................2212.0021001000
...........................................................................................................CTCGAATAGCGTTGTGACTGG........................................................................................................................2112.0022000000
..............................................................................................................GAATAGCGTTGTGACTGAG-......................................................................................................................1912.0022000000
..........................................................................................................TCTCGAATAGCGTTGTGACTGC........................................................................................................................2212.0020000101
...........................................................................................................CTCGAATAGCGTTGTGACTTTT-......................................................................................................................2212.0020000200
.......................................................................................................................................................TCAGCGGCAAGGCTATTCCAGTT..........................................................................2312.0021000100
..........................................................................................................TCTCGAATAGCGTTGTGACTA.........................................................................................................................2112.0022000000
........................................................................................................................................................CAGCGGCAAGGCTATTCCAGTT..........................................................................2212.0022000000
..........................................................................................................TCTCGAATAGCGTTGTGACTC.........................................................................................................................2112.0021010000
..........................................................................................................TCTCGAATAGCGTTGTGTA...........................................................................................................................1921.5030000300
..................................................................................................................................................TCTACTCAGCGGCAAGGCTAT.................................................................................2111.0011000000
.......................................................................................................................................................TCAGCGGCAAGGCTATTCCA.............................................................................2011.0010000100
.....................................................................................................................................................ACTCAGCGGCAAGGCTATTCCAG............................................................................2311.0010000100
..........................................................................................................................................................GCGGCAAGGCTATTCCAGTA..........................................................................2011.0011000000
..........................................................................................................TCTCGAATAGCGTTGTGACG..........................................................................................................................2011.0011000000
...............................................................................................................AATAGCGTTGTGACTGAG-GTA...................................................................................................................2111.0011000000
...........................................................................................................CTCGAATAGCGTTGTGACTGAT-......................................................................................................................2211.0010000100
................................................................................................................................G-GTAACTGCGCATCGAATCTACTC...............................................................................................2411.0011000000
................................................................................................................ATAGCGTTGTGACTGAG-G.....................................................................................................................1811.0011000000
..........................................................................................................................................................GCGGCAAGGCTATTCCAGT...........................................................................1911.0010000100
.......................................................................................................................TGTGACTGAG-GTAACTGCGC............................................................................................................2011.0010100000
..........................................................................................................TCTCGAATAGCGTTGTGACTGTA-......................................................................................................................2311.0010000010
.......................................................................................................................................................TCAGCGGCAAGGCTATTCCAGTAA.........................................................................2411.0011000000
.............................................................................................................CGAATAGCGTTGTGACTGAG-T.....................................................................................................................2111.0010000100
dp5
TCCA--TCG--AATCTCCTTATC--------------------------------------TCCTGAATC----GGAGTACG----------ACTGAAACAACCCGTCTCGAATAGCGTTGTGACTGAT---GACTGCATTTGTAATTTTCTCAGCGGCAGTGCTATTCCAGTTGGGTTGTTTGCGGCCAAACAAC----------------------------------------------------SizeHit CountTotal NormTotalM022

Male-body		M040

Female-body		M059

Embryo		M062

Head		V043

Embryo		V051

Head		V112

Male-body		SRR902010

Ovary		SRR902011

Testis		SRR902012

CNS imaginal disc
..........................................................................................................TCTCGAATAGCGTTGTGACTGA........................................................................................................................22112319.00123192977340811985953977283791235439
..........................................................................................................TCTCGAATAGCGTTGTGACTG.........................................................................................................................2114429.00442920305443191392015654330144
..........................................................................................................TCTCGAATAGCGTTGTGACT..........................................................................................................................2012017.00201722313002646117426275315
...........................................................................................................CTCGAATAGCGTTGTGACTGA........................................................................................................................211708.00708169011135024
..........................................................................................................TCTCGAATAGCGTTGTGACTGAT---G...................................................................................................................241335.0033581741633719457251
...........................................................................................................CTCGAATAGCGTTGTGACTG.........................................................................................................................201263.00263026200001000
..........................................................................................................TCTCGAATAGCGTTGTGACTGT........................................................................................................................221227.00227314452111204298
......................................................................................................................................................CTCAGCGGCAGTGCTATTCC..............................................................................201206.00206011321002259000
..........................................................................................................TCTCGAATAGCGTTGTGACTGAT---....................................................................................................................231188.001887144414673102
..........................................................................................................TCTCGAATAGCGTTGTGACTGAT---GA..................................................................................................................251180.00180698143181016744
.............................................................................................................CGAATAGCGTTGTGACTGAT---GA..................................................................................................................221156.0015617980271051394
..........................................................................................................TCTCGAATAGCGTTGTGACTGAA---....................................................................................................................231150.00150497531342580
..........................................................................................................TCTCGAATAGCGTTGTGAC...........................................................................................................................191149.001495695516201010
......................................................................................................................................................CTCAGCGGCAGTGCTATTCCAG............................................................................221144.00144071102151036000
.............................................................................................................CGAATAGCGTTGTGACTGAT---G...................................................................................................................211115.001151716045106102
.........................................................................................................................................................AGCGGCAGTGCTATTCCAGTTG.........................................................................221105.00105078221400000
..........................................................................................................TCTCGAATAGCGTTGTGACTGAA---A...................................................................................................................241100.00100075321011800
...........................................................................................................CTCGAATAGCGTTGTGACT..........................................................................................................................19189.008908700010001
............................................................................................................TCGAATAGCGTTGTGACTGA........................................................................................................................20163.006304310435241
......................................................................................................................................................CTCAGCGGCAGTGCTATTCCA.............................................................................21138.003803310103000
..........................................................................................................TCTCGAATAGCGTTGTGACTT.........................................................................................................................21127.002701600205040
..........................................................................................................TCTCGAATAGCGTTGTGACTGG........................................................................................................................22122.002211800210000
............................................................................................................TCGAATAGCGTTGTGACTG.........................................................................................................................19120.002001300124000
...........................................................................................................CTCGAATAGCGTTGTGACTGT........................................................................................................................21120.002011900000000
...........................................................................................................CTCGAATAGCGTTGTGACTGAT---....................................................................................................................22119.001901900000000
..........................................................................................................TCTCGAATAGCGTTGTGACC..........................................................................................................................20118.00183069000000
..........................................................................................................................................................GCGGCAGTGCTATTCCAGTTG.........................................................................21118.001801440000000
......................................................................................................................................................CTCAGCGGCAGTGCTATTC...............................................................................19118.001801600020000
..........................................................................................................TCTCGAATAGCGTTGTGA............................................................................................................................18116.00160100264012
...........................................................................................................CTCGAATAGCGTTGTGACTGAT---GA..................................................................................................................24115.001501500000000
..........................................................................................................TCTCGAATAGCGTTGTGACTGAT---GAC.................................................................................................................26114.00140800100500
...........................................................................................................CTCGAATAGCGTTGTGACTGAT---G...................................................................................................................23113.001301300000000
.............................................................................................................CGAATAGCGTTGTGACTGA........................................................................................................................19113.001311200000000
..........................................................................................................TCTCGAATAGCGTTGTGACTGC........................................................................................................................22112.00120121124010
.............................................................................................................CGAATAGCGTTGTGACTGAT---....................................................................................................................20111.00110900001010
.......................................................................................................................................................TCAGCGGCAGTGCTATTCC..............................................................................19111.001101100000000
...........................................................................................................CTCGAATAGCGTTGTGACTGAA---....................................................................................................................22110.001001000000000
..........................................................................................................TCTCGAATAGCGTTGTGTT...........................................................................................................................19210.002001600013000
..........................................................................................................TCTCGAATAGCGTTGTGACTGAT---T...................................................................................................................2419.0091200002310
..............................................................................................................GAATAGCGTTGTGACTGAT---GA..................................................................................................................2117.0070600001000
.......................................................................................................................................................TCAGCGGCAGTGCTATTCCAG............................................................................2117.0070700000000
..............................................................................................................GAATAGCGTTGTGACTGA........................................................................................................................1817.0070500010001
...........................................................................................................CTCGAATAGCGTTGTGACTGAA---A...................................................................................................................2317.0070700000000
................................................................................................................................T---GACTGCATTTGTAATTTTCTC...............................................................................................2217.0070320100010
..........................................................................................................TCTCGAATAGCGTTGTGACTGAG---....................................................................................................................2316.0060600000000
............................................................................................................TCGAATAGCGTTGTGACT..........................................................................................................................1816.0060410001000
..........................................................................................................TCTCGAATAGCGTTGTGACTGAT---GAA.................................................................................................................2615.0050400100000
..........................................................................................................................................................GCGGCAGTGCTATTCCAGTTGT........................................................................2215.0050500000000
......................................................................................................................................................CTCAGCGGCAGTGCTATTCCAGTT..........................................................................2415.0050201002000
...........................................................................................................CTCGAATAGCGTTGTGAC...........................................................................................................................1815.0050500000000
..........................................................................................................TCTCGAATAGCGTTGTGACA..........................................................................................................................2014.0040400000000
..........................................................................................................TCTCGAATAGCGTTGTGACTGAC---....................................................................................................................2314.0040202000000
..........................................................................................................TCTCGAATAGCGTTGTGACTGAT---GT..................................................................................................................2514.0040300001000
..............................................................................................................GAATAGCGTTGTGACTGAT---G...................................................................................................................2014.0040400000000
..........................................................................................................TCTCGAATAGCGTTGTGACTGAA---T...................................................................................................................2414.0040100000120
..........................................................................................................TCTCGAATAGCGTTGTGACTGAT---GACTG...............................................................................................................2814.0040400000000
..........................................................................................................TCTCGAATAGCGTTGTGACTA.........................................................................................................................2114.0040300010000
.........................................................................................................GTCTCGAATAGCGTTGTGACTG.........................................................................................................................2214.0040400000000
..........................................................................................................TCTCGAATAGCGTTGTGACTGAC---TG..................................................................................................................2514.0040000000040
.......................................................................................................................................................TCAGCGGCAGTGCTATTC...............................................................................1814.0040400000000
.............................................................................................................CGAATAGCGTTGTGACTGAT---GT..................................................................................................................2213.0030100100001
..........................................................................................................................................................GCGGCAGTGCTATTCCAGTTGA........................................................................2213.0030120000000
.............................................................................................................CGAATAGCGTTGTGACTG.........................................................................................................................1813.0030300000000
.........................................................................................................GTCTCGAATAGCGTTGTGACTGA........................................................................................................................2313.0030300000000
..........................................................................................................TCTCGAATAGCGTTGTGACTGAT---GAG.................................................................................................................2613.0030000000120
.........................................................................................................................................................AGCGGCAGTGCTATTCCAGT...........................................................................2013.0030210000000
.............................................................................................................CGAATAGCGTTGTGACTGAT---GAA.................................................................................................................2313.0030100100001
.........................................................................................................................................................AGCGGCAGTGCTATTCCAGTT..........................................................................2113.0030111000000
............................................................................................................TCGAATAGCGTTGTGACTGAT---....................................................................................................................2113.0030200001000
......................................................................................................................................................CTCAGCGGCAGTGCTATTCCAGT...........................................................................2313.0030300000000
.............................................................................................................CGAATAGCGTTGTGACTGAT---GAAAA...............................................................................................................2512.0020200000000
..........................................................................................................TCTCGAATAGCGTTGTGACTGTA---A...................................................................................................................2412.0020200000000
..........................................................................................................TCTCGAATAGCGTTGTGT............................................................................................................................1812.0020000110000
..........................................................................................................TCTCGAATAGCGTTGTGACTGAA---TG..................................................................................................................2512.0020000000200
..........................................................................................................TCTCGAATAGCGTTGTGACTGAT---TT..................................................................................................................2512.0020100001000
..........................................................................................................TCTCGAATAGCGTTGTGACTTT........................................................................................................................2212.0020010001000
............................................................................................................TCGAATAGCGTTGTGACTGAT---GA..................................................................................................................2312.0020200000000
............................................................................................................TCGAATAGCGTTGTGACTGAG---....................................................................................................................2112.0020200000000
..........................................................................................................TCTCGAATAGCGTTGTGACTGAT---GACTGC..............................................................................................................2912.0020020000000
....................................................................................................................................................TTCTCAGCGGCAGTGCTATTCC..............................................................................2212.0020200000000
..........................................................................................................TCTCGAATAGCGTTGTGAA...........................................................................................................................1912.0020200000000
..........................................................................................................TCTCGAATAGCGTTGTGAT...........................................................................................................................1912.0020200000000
............................................................................................................TCGAATAGCGTTGTGACTGT........................................................................................................................2012.0020000011000
..........................................................................................................TCTCGAATAGCGTTGTGACTGTA---C...................................................................................................................2412.0020000000020
..........................................................................................................TCTCGAATAGCGTTGTGACG..........................................................................................................................2012.0022000000000
............................................................................................................TCGAATAGCGTTGTGACTGAT---G...................................................................................................................2212.0020110000000
..........................................................................................................TCTCGAATAGCGTTGTGACTGAT---GGG.................................................................................................................2612.0020000000020
.............................................................................................................CGAATAGCGTTGTGACTGAT---T...................................................................................................................2112.0020000002000
.............................................................................................................CGAATAGCGTTGTGACTGAT---GG..................................................................................................................2211.0010000010000
..........................................................................................................TCTCGAATAGCGTTGTGACTC.........................................................................................................................2111.0010100000000
...........................................................................................................CTCGAATAGCGTTGTGACTGG........................................................................................................................2111.0010100000000
.............................................................................................................CGAATAGCGTTGTGACTTT........................................................................................................................1911.0010100000000
..........................................................................................................TCTCGAATAGCGTTGTGACTAG........................................................................................................................2211.0010100000000
.........................................................................................................................................................AGCGGCAGTGCTATTCCAGTTGA........................................................................2311.0010100000000
..........................................................................................................TCTCGAATAGCGTTGTGACTGAT---GAT.................................................................................................................2611.0010100000000
...........................................................................................................CTCGAATAGCGTTGTGACTGAG---....................................................................................................................2211.0010100000000
..........................................................................................................TCTCGAATAGCGTTGTGACTGAT---AG..................................................................................................................2511.0010000000010
...............................................................................................................AATAGCGTTGTGACTGAT---G...................................................................................................................1911.0010100000000
..........................................................................................................TCTCGAATAGCGTTGTGACTGAT---A...................................................................................................................2411.0010000000010
......................................................................................................................................................CTCAGCGGCAGTGCTATTCA..............................................................................2011.0010100000000
..........................................................................................................TCTCGAATAGCGTTGTGACTGAT---CC..................................................................................................................2511.0010000000010
..........................................................................................................TCTCGAATAGCGTTGTGACTGAT---GAAG................................................................................................................2711.0010000000010
......................................................................................................................................................CTCAGCGGCAGTGCTATTCCAGTTGT........................................................................2611.0010000001000
...........................................................................................................CTCGAATAGCGTTGTGACTGAT---A...................................................................................................................2311.0010100000000
..............................................................................................................GAATAGCGTTGTGACTGAT---....................................................................................................................1911.0010100000000
.............................................................................................................CGAATAGCGTTGTGACTGAT---GAAA................................................................................................................2411.0010100000000
...........................................................................................................CTCGAATAGCGTTGTGACTT.........................................................................................................................2011.0010100000000
droPer2
TCCA--TCG--AATCTCCTTGTC--------------------------------------TCCTGAATC----GGAGTACG----------ACTGAAACAACCCGTCTCGAATAGCGTTGTGACTGAT---GACTGCATTTGTAATTTTCTCAGCGGCAGTGCTATTCCAGTTGGGTTGTTTGCGGCCAAACAAC----------------------------------------------------SizeHit CountTotal NormTotalM021

Embryo		M042

Female-body		V042

Embryo		V050

Head		V057

Head		V111

Male-body
..........................................................................................................TCTCGAATAGCGTTGTGACTGA........................................................................................................................2218391.00839146311432141500718969
..........................................................................................................TCTCGAATAGCGTTGTGACTG.........................................................................................................................2112240.00224011461545268406792
..........................................................................................................TCTCGAATAGCGTTGTGACT..........................................................................................................................2011391.001391569256976229252
..........................................................................................................TCTCGAATAGCGTTGTGACTGG........................................................................................................................221850.0085084051130
..........................................................................................................TCTCGAATAGCGTTGTGACTGAT---G...................................................................................................................241244.0024490247132090
......................................................................................................................................................CTCAGCGGCAGTGCTATTCC..............................................................................201202.0020202002410553
..........................................................................................................TCTCGAATAGCGTTGTGACTGAT---GA..................................................................................................................251141.001417020182022
..........................................................................................................TCTCGAATAGCGTTGTGACTGAA---....................................................................................................................231140.001401002300710
.............................................................................................................CGAATAGCGTTGTGACTGAT---GA..................................................................................................................221135.0013525181151462
...........................................................................................................CTCGAATAGCGTTGTGACTGA........................................................................................................................211123.0012301190121
..........................................................................................................TCTCGAATAGCGTTGTGACTGT........................................................................................................................221100.00100827091145
..........................................................................................................TCTCGAATAGCGTTGTGAC...........................................................................................................................19180.008053121293
..........................................................................................................TCTCGAATAGCGTTGTGACTGAT---....................................................................................................................23177.00771321371419
......................................................................................................................................................CTCAGCGGCAGTGCTATTCCAG............................................................................22174.00740252151418
.............................................................................................................CGAATAGCGTTGTGACTGAT---G...................................................................................................................21156.005601812629
...........................................................................................................CTCGAATAGCGTTGTGACTG.........................................................................................................................20146.00460430111
..........................................................................................................TCTCGAATAGCGTTGTGACTGAA---A...................................................................................................................24134.003421130000
..........................................................................................................TCTCGAATAGCGTTGTGACC..........................................................................................................................20129.00292800001
...........................................................................................................CTCGAATAGCGTTGTGACT..........................................................................................................................19129.00290270020
............................................................................................................TCGAATAGCGTTGTGACTGA........................................................................................................................20124.00243122142
......................................................................................................................................................CTCAGCGGCAGTGCTATTC...............................................................................19124.00240303171
..........................................................................................................TCTCGAATAGCGTTGTGA............................................................................................................................18123.0023230981
..........................................................................................................TCTCGAATAGCGTTGTGACG..........................................................................................................................20117.00171700000
..........................................................................................................TCTCGAATAGCGTTGTGACTGC........................................................................................................................22117.0017301490
......................................................................................................................................................CTCAGCGGCAGTGCTATTCCA.............................................................................21116.00160140020
..........................................................................................................TCTCGAATAGCGTTGTGTT...........................................................................................................................19114.0014030443
.........................................................................................................................................................AGCGGCAGTGCTATTCCAGTTG.........................................................................22113.00130110110
..........................................................................................................TCTCGAATAGCGTTGTGACTGAT---GG..................................................................................................................25113.00131300000
............................................................................................................TCGAATAGCGTTGTGACTG.........................................................................................................................1919.009050040
..........................................................................................................TCTCGAATAGCGTTGTGT............................................................................................................................1818.008000161
..........................................................................................................TCTCGAATAGCGTTGTGACTGAT---T...................................................................................................................2417.007100123
......................................................................................................................................................CTCAGCGGCAGTGCTATTCCAGT...........................................................................2317.007000214
.............................................................................................................CGAATAGCGTTGTGACTGAT---....................................................................................................................2017.007010006
..........................................................................................................TCTCGAATAGCGTTGTGACTT.........................................................................................................................2117.007010042
.............................................................................GTACG----------ACTGAAACAACCCG..............................................................................................................................................1916.006600000
..........................................................................................................TCTCGAATAGCGTTGTGACTGAC---....................................................................................................................2316.006500001
.............................................................................................................CGAATAGCGTTGTGACTGA........................................................................................................................1915.005200003
..........................................................................................................TCTCGAATAGCGTTGTGACTC.........................................................................................................................2115.005000140
..........................................................................................................TCTCGAATAGCGTTGTGACTGAT---GACTG...............................................................................................................2815.005030002
..........................................................................................................TCTCGAATAGCGTTGTGACTGAT---GAC.................................................................................................................2614.004121000
..........................................................................................................TCTCGAATAGCGTTGTGACA..........................................................................................................................2014.004220000
.............................................................................................................CGAATAGCGTTGTGACTGAT---GT..................................................................................................................2214.004000013
..........................................................................................................TCTCGAATAGCGTTGTGACTGAT---GT..................................................................................................................2514.004000013
...........................................................................................................CTCGAATAGCGTTGTGACTGAT---GA..................................................................................................................2414.004130000
...........................................................................................................CTCGAATAGCGTTGTGACTGAA---A...................................................................................................................2313.003030000
..........................................................................................................TCTCGAATAGCGTTGTGACTGAT---GACT................................................................................................................2713.003210000
.............................................................................................................CGAATAGCGTTGTGACTGAT---GG..................................................................................................................2213.003200010
.........................................................................................................GTCTCGAATAGCGTTGTGACTGA........................................................................................................................2313.003030000
..............................................................................................................GAATAGCGTTGTGACTGA........................................................................................................................1813.003200010
.............................................................................................................CGAATAGCGTTGTGACTGAT---GAC.................................................................................................................2313.003000003
..........................................................................................................TCTCGAATAGCGTTGTGACTGAT---GACTGC..............................................................................................................2913.003300000
......................................................................................................................................................CTCAGCGGCAGTGCTATTCCAT............................................................................2213.003000021
.......................................................................................................................................................TCAGCGGCAGTGCTATTCC..............................................................................1913.003020010
..........................................................................................................TCTCGAATAGCGTTGTGACTGAT---GAA.................................................................................................................2613.003210000
...........................................................................................................CTCGAATAGCGTTGTGACTGT........................................................................................................................2113.003020001
..........................................................................................................TCTCGAATAGCGTTGTGACTGAG---....................................................................................................................2313.003210000
...........................................................................................................CTCGAATAGCGTTGTGAC...........................................................................................................................1812.002020000
......................................................................................................................................................CTCAGCGGCAGTGCTATT................................................................................1812.002010010
......................................................................................................................................................CTCAGCGGCAGTGCTATTT...............................................................................1912.002000110
..........................................................................................................TCTCGAATAGCGTTGTGACTA.........................................................................................................................2112.002100010
.............................................................................................................CGAATAGCGTTGTGACTGAT---GAA.................................................................................................................2312.002010001
..............................................................................................................GAATAGCGTTGTGACTGAT---GA..................................................................................................................2112.002020000
......................................................................................................................................................CTCAGCGGCAGTGCTATTCCC.............................................................................2112.002000011
......................................................................................................................................................CTCAGCGGCAGTGCTATTCCAC............................................................................2212.002000110
..........................................................................................................TCTCGAATAGCGTTGTGACTGAT---GGAA................................................................................................................2711.001010000
..........................................................................................................TCTCGAATAGCGTTGTGTA...........................................................................................................................1911.001000001
.........................................................................................................................................................AGCGGCAGTGCTATTCCAGTT..........................................................................2111.001010000
...........................................................................................................CTCGAATAGCGTTGTGACTGAT---G...................................................................................................................2311.001000100
............................................................................................................TCGAATAGCGTTGTGACTGAT---G...................................................................................................................2211.001000001
..........................................................................................................TCTCGAATAGCGTTGTGACTGAT---GACTGT..............................................................................................................2911.001100000
.............................................................................................................CGAATAGCGTTGTGACTG.........................................................................................................................1811.001001000
.......................................................................................................................................................TCAGCGGCAGTGCTATTCCA.............................................................................2011.001010000
................................................................................................................................T---GACTGCATTTGTAATTTTCTC...............................................................................................2211.001000010
droWil2
CATA--CCATAAAAATATTTACT---------------------------------------------ACACAAAGTGAACA--GTTCGATGACTTAAATGCCCAATCTCGAATAGCGTTGTAACTGAT-G--ATTGTGATATGA-GAGAGTCAGCCACTATGCTAT---------------------------------------------------------------------------------SizeHit CountTotal NormTotalM020

Head		M045

Female-body		V117

Male-body		V118

Embryo		V119

Head
..........................................................................................................TCTCGAATAGCGTTGTAACTGA........................................................................................................................221121238.001212381083243869125356632129
..........................................................................................................TCTCGAATAGCGTTGTAACTGG........................................................................................................................22114438.0014438144293024
..........................................................................................................TCTCGAATAGCGTTGTAACTG.........................................................................................................................21110155.00101554312170775713981981
..........................................................................................................TCTCGAATAGCGTTGTAACT..........................................................................................................................2014197.004197345823011599295
..........................................................................................................TCTCGAATAGCGTTGTAACTGAA-......................................................................................................................2313808.0038083338972429356
..........................................................................................................TCTCGAATAGCGTTGTAAC...........................................................................................................................1911579.00157915627046
..........................................................................................................TCTCGAATAGCGTTGTAACTGAT-......................................................................................................................2311250.001250110059155026
..........................................................................................................TCTCGAATAGCGTTGTAACTGAA-A--...................................................................................................................241451.004511868321746
...........................................................................................................CTCGAATAGCGTTGTAACTGA........................................................................................................................211329.0032948270074
............................................................................................................TCGAATAGCGTTGTAACTGAT-G--...................................................................................................................221312.0031211816512998
............................................................................................................TCGAATAGCGTTGTAACTGAT-......................................................................................................................211182.0018212439964
..........................................................................................................TCTCGAATAGCGTTGTAACTGAC-......................................................................................................................231176.001761724000
..........................................................................................................TCTCGAATAGCGTTGTAACTGT........................................................................................................................221172.0017215110416
............................................................................................................TCGAATAGCGTTGTAACTGA........................................................................................................................201163.0016311725786
..........................................................................................................TCTCGAATAGCGTTGTAACC..........................................................................................................................201147.001471460001
...........................................................................................................CTCGAATAGCGTTGTAACTG.........................................................................................................................201117.001178105013
................................................................................................................................T-G--ATTGTGATATGA-GAGAGTC...............................................................................................21183.00831723565
..........................................................................................................TCTCGAATAGCGTTGTAACTGC........................................................................................................................22164.0064581203
..........................................................................................................TCTCGAATAGCGTTGTAA............................................................................................................................18161.00615153911
..........................................................................................................TCTCGAATAGCGTTGTAACTGAT-T--...................................................................................................................24150.0050432014
..........................................................................................................TCTCGAATAGCGTTGTAACG..........................................................................................................................20132.0032320000
..............................................................................................................GAATAGCGTTGTAACTGA........................................................................................................................18123.0023156002
..........................................................................................................TCTCGAATAGCGTTGTAACTGAG-......................................................................................................................23122.0022182020
..........................................................................................................TCTCGAATAGCGTTGTAACTGAT-C--...................................................................................................................24119.0019151003
..........................................................................................................TCTCGAATAGCGTTGTAACTA.........................................................................................................................21119.001933157
............................................................................................................TCGAATAGCGTTGTAACTGG........................................................................................................................20118.0018180000
...........................................................................................................CTCGAATAGCGTTGTAACT..........................................................................................................................19117.0017115001
...........................................................................................................CTCGAATAGCGTTGTAACTGAA-......................................................................................................................22115.0015312000
..........................................................................................................TCTCGAATAGCGTTGTAACTGAT-G--A..................................................................................................................25114.0014110120
.............................................................................................................CGAATAGCGTTGTAACTGA........................................................................................................................19114.001459000
............................................................................................................TCGAATAGCGTTGTAACTGAT-T--...................................................................................................................22114.001483021
..........................................................................................................TCTCGAATAGCGTTGTAACTT.........................................................................................................................21113.001361015
............................................................................................................TCGAATAGCGTTGTAACTG.........................................................................................................................19113.001306205
..........................................................................................................TCTCGAATAGCGTTGTAACTGAT-G--...................................................................................................................24111.001150033
............................................................................................................TCGAATAGCGTTGTAACT..........................................................................................................................18110.001054001
................................................................................................................................T-G--ATTGTGATATGA-GAGAGT................................................................................................20110.001011143
...........................................................................................................CTCGAATAGCGTTGTAACTGAT-......................................................................................................................2219.00909000
..........................................................................................................TCTCGAATAGCGTTGTAACTC.........................................................................................................................2119.00920313
...........................................................................................................CTCGAATAGCGTTGTAACTGG........................................................................................................................2119.00990000
..........................................................................................................TCTCGAATAGCGTTGTAACTGAT-A--...................................................................................................................2418.00851020
............................................................................................................TCGAATAGCGTTGTAACTGAT-G--A..................................................................................................................2317.00730220
.............................................................................................................CGAATAGCGTTGTAACTGAT-......................................................................................................................2016.00615000
............................................................................................................TCGAATAGCGTTGTAACTGAA-......................................................................................................................2116.00660000
..........................................................................................................TCTCGAATAGCGTTGTAACTGAA-C--...................................................................................................................2416.00650010
.........................................................................................................ATCTCGAATAGCGTTGTAACTGA........................................................................................................................2315.00512110
..........................................................................................................TCTCGAATAGCGTTGTAACTGAA-T--...................................................................................................................2414.00422000
................................................................................................................................T-G--ATTGTGATATGA-GAGAGTCT..............................................................................................2214.00400220
..........................................................................................................TCTCGAATAGCGTTGTAACTGAC-A--...................................................................................................................2414.00440000
..........................................................................................................TCTCGAATAGCGTTGTAACA..........................................................................................................................2014.00430010
.............................................................................................................CGAATAGCGTTGTAACTG.........................................................................................................................1813.00303000
...........................................................................................................CTCGAATAGCGTTGTAACTGAA-A--...................................................................................................................2313.00303000
............................................................................................................TCGAATAGCGTTGTAACTGAT-G--T..................................................................................................................2313.00320001
...........................................................................................................CTCGAATAGCGTTGTAACTGT........................................................................................................................2113.00303000
............................................................................................................TCGAATAGCGTTGTAACTGAT-G--ATTG...............................................................................................................2613.00300021
..................................................................................................................................G--ATTGTGATATGA-GAGAGTC...............................................................................................2012.00210001
..........................................................................................................TCTCGAATAGCGTTGTAACTGTA-......................................................................................................................2312.00210001
............................................................................................................TCGAATAGCGTTGTAACTGAT-G--AT.................................................................................................................2412.00202000
............................................................................................................TCGAATAGCGTTGTAACTGAC-......................................................................................................................2112.00220000
.........................................................................................................ATCTCGAATAGCGTTGTAACTGG........................................................................................................................2312.00220000
droMoj3
TTGT--TGGCGAACTTT------------------------------CAATGGCTCATTTA------------------ACT----------GGCTAATTGCCTTCTCTCGAATTGCATTATGGCCGAT-GACACAATTCTGCAAAATCA-TCAGTTGGAATGCCATTCGGGTCAAGGCATTT-----------------------------------------------------------------SizeHit CountTotal NormTotalM046

Female-body		V041

Embryo		V049

Head		V056

Head		M060

Embryo		V110

Male-body
..........................................................................................................TCTCGAATTGCATTATGGCCGA........................................................................................................................22111060.001106056355515972349592832
..........................................................................................................TCTCGAATTGCATTATGGCCG.........................................................................................................................2111951.001951937233650319154
...........................................................................................................CTCGAATTGCATTATGGCCGA........................................................................................................................211494.0049448800240
.........................................................................................................................................................AGTTGGAATGCCATTCGGGTCA.........................................................................221346.003464216448018146
.....................................................................................................................................................A-TCAGTTGGAATGCCATTCGGG............................................................................221318.00318409444921155
.....................................................................................................................................................A-TCAGTTGGAATGCCATTCGG.............................................................................211215.0021522322321135
..........................................................................................................TCTCGAATTGCATTATGGCC..........................................................................................................................201141.0014157116302611
..........................................................................................................TCTCGAATTGCATTATGGCCGC........................................................................................................................221104.0010440465022
...........................................................................................................CTCGAATTGCATTATGGCCG.........................................................................................................................20181.00818000100
..........................................................................................................TCTCGAATTGCATTATGGCCGAT-......................................................................................................................23179.007949071715
.........................................................................................................................................................AGTTGGAATGCCATTCGGGTC..........................................................................21163.006395582511
.........................................................................................................CTCTCGAATTGCATTATGGCCGA........................................................................................................................23159.0059111123230
..........................................................................................................TCTCGAATTGCATTATGGCCGT........................................................................................................................22151.005112062922
............................................................................................................TCGAATTGCATTATGGCCGA........................................................................................................................20141.00412524622
.............................................................................................................CGAATTGCATTATGGCCGAT-GA....................................................................................................................22137.00372722213
..........................................................................................................TCTCGAATTGCATTATGGC...........................................................................................................................19133.00332102613
................................................................................................................................T-GACACAATTCTGCAAAATCA-TC...............................................................................................23128.00284010230
..........................................................................................................TCTCGAATTGCATTATGGCCGAA-......................................................................................................................23127.00271701603
.....................................................................................................................................................A-TCAGTTGGAATGCCATTCG..............................................................................20126.00266034013
.....................................................................................................................................................A-TCAGTTGGAATGCCATTCGGGT...........................................................................23121.00214003014
..........................................................................................................TCTCGAATTGCATTATGGCCGG........................................................................................................................22119.00190061210
..........................................................................................................TCTCGAATTGCATTATGGCCT.........................................................................................................................21112.0012309000
............................................................................................................TCGAATTGCATTATGGCCG.........................................................................................................................19111.0011702200
..........................................................................................................TCTCGAATTGCATTATGGCCGAT-G.....................................................................................................................24110.0010501202
..............................................................................................................GAATTGCATTATGGCCGA........................................................................................................................1819.009500310
.......................................................................................................................................................TCAGTTGGAATGCCATTCGGG............................................................................2118.008302111
.........................................................................................................................................................AGTTGGAATGCCATTCGGGT...........................................................................2018.008202103
.....................................................................................................................................................A-TCAGTTGGAATGCCATTCGGGA...........................................................................2317.007000106
.........................................................................................................CTCTCGAATTGCATTATGGCCG.........................................................................................................................2217.007402100
...........................................................................................................CTCGAATTGCATTATGGCCGAT-......................................................................................................................2217.007700000
.............................................................................................................CGAATTGCATTATGGCCGAT-G.....................................................................................................................2117.007401200
.............................................................................................................CGAATTGCATTATGGCCGA........................................................................................................................1917.007700000
...........................................................................................................CTCGAATTGCATTATGGCC..........................................................................................................................1916.006600000
.....................................................................................................................................................A-TCAGTTGGAATGCCATTCGGT............................................................................2216.006003003
..........................................................................................................................................................GTTGGAATGCCATTCGGGTCA.........................................................................2116.006600000
.......................................................................................................................................................TCAGTTGGAATGCCATTCGGGT...........................................................................2215.005301010
..........................................................................................................TCTCGAATTGCATTATGGCCGAT-T.....................................................................................................................2415.005401000
..........................................................................................................TCTCGAATTGCATTATGGCCGAG-......................................................................................................................2315.005500000
.........................................................................................................................................................AGTTGGAATGCCATTCGGG............................................................................1914.004101200
..........................................................................................................TCTCGAATTGCATTATGG............................................................................................................................1814.004101110
..........................................................................................................TCTCGAATTGCATTATGGCCGAC-......................................................................................................................2314.004400000
.....................................................................................................................................................A-TCAGTTGGAATGCCATTCGGC............................................................................2214.004100021
.........................................................................................................CTCTCGAATTGCATTATGGCCGC........................................................................................................................2313.003001200
..........................................................................................................TCTCGAATTGCATTATGGCCGAA-A.....................................................................................................................2413.003300000
...........................................................................................................................................................TTGGAATGCCATTCGGGTCA.........................................................................2013.003200001
.......................................................................................................................................................TCAGTTGGAATGCCATTCGGGTC..........................................................................2313.003000012
.....................................................................................................................................................A-TCAGTTGGAATGCCATTCGT.............................................................................2113.003100101
..........................................................................................................TCTCGAATTGCATTATGGCCGTC-......................................................................................................................2313.003100101
.....................................................................................................................................................A-TCAGTTGGAATGCCATTCGGA............................................................................2212.002000002
.............................................................................................................CGAATTGCATTATGGCCGAT-GAA...................................................................................................................2312.002001001
.................................................................................................ATTGCCTTCTCTCGAATTGCA..................................................................................................................................2112.002000101
...........................................................................................................CTCGAATTGCATTATGGCCGAA-......................................................................................................................2212.002200000
.........................................................................................................................................................AGTTGGAATGCCATTCGGGTCC.........................................................................2212.002002000
..........................................................................................................TCTCGAATTGCATTATGGCCA.........................................................................................................................2112.002101000
.......................................................................................................................................................TCAGTTGGAATGCCATTCGGGTCA.........................................................................2412.002100010
..........................................................................................................TCTCGAATTGCATTATGGCCGAA-T.....................................................................................................................2412.002200000
.......................................................................................................................................................TCAGTTGGAATGCCATTCGG.............................................................................2012.002200000
..............................................................................................................GAATTGCATTATGGCCGAT-GA....................................................................................................................2112.002200000
..........................................................................................................TCTCGAATTGCATTATGGCCC.........................................................................................................................2112.002000020
..........................................................................................................TCTCGAATTGCATTATGGCCTC........................................................................................................................2212.002000200
.....................................................................................................................................................A-TCAGTTGGAATGCCATTCGGGAT..........................................................................2412.002000200
......................................................................................................................................CAATTCTGCAAAATCA-TC...............................................................................................1811.001000010
..........................................................................................................................................................GTTGGAATGCCATTCGGGT...........................................................................1911.001100000
...........................................................................................................CTCGAATTGCATTATGGCCGAT-T.....................................................................................................................2311.001100000
.........................................................................................................................................................AGTTGGAATGCCATTCGGGTCAA........................................................................2311.001001000
..........................................................................................................TCTCGAATTGCATTATGGCCGGG-......................................................................................................................2311.001100000
..........................................................................................................TCTCGAATTGCATTATGGCCGTA-......................................................................................................................2311.001000100
..........................................................................................................TCTCGAATTGCATTATGGCA..........................................................................................................................2011.001001000
droGri2
TTTA--CCTTAGTTTATTACTGAAATGGAAAGTTGCAAAGTTT----GAAT-----------------------------------------GGCTTATTGCCTTTTCTCGAATTGCATTGTGACTGAT-GAAAAT----TTAGAAATTCATCAGTTAAAATGCCATTCGAGTTAAGGCACTT-----------------------------------------------------------------SizeHit CountTotal NormTotalM041

Female-body		V109

Male-body
..........................................................................................................TCTCGAATTGCATTGTGACTGA........................................................................................................................221267.0026717988
..........................................................................................................TCTCGAATTGCATTGTGACTG.........................................................................................................................21188.00884741
..........................................................................................................TCTCGAATTGCATTGTGACT..........................................................................................................................20137.00372611
..........................................................................................................TCTCGAATTGCATTGTGACTGAT-......................................................................................................................23123.0023203
...........................................................................................................CTCGAATTGCATTGTGACTGA........................................................................................................................21116.0016160
............................................................................................................TCGAATTGCATTGTGACTGAT-......................................................................................................................2115.00541
...........................................................................................................CTCGAATTGCATTGTGACTG.........................................................................................................................2015.00550
..........................................................................................................TCTCGAATTGCATTGTGA............................................................................................................................1815.00505
..........................................................................................................TCTCGAATTGCATTGTGACTGAA-......................................................................................................................2313.00321
...........................................................................................................CTCGAATTGCATTGTGACT..........................................................................................................................1912.00220
..........................................................................................................TCTCGAATTGCATTGTGACTGAT-G.....................................................................................................................2412.00202
............................................................................................................TCGAATTGCATTGTGACTGA........................................................................................................................2012.00220
..........................................................................................................TCTCGAATTGCATTGTGACTGAG-......................................................................................................................2312.00220
.............................................................................................................CGAATTGCATTGTGACTGAT-G.....................................................................................................................2111.00110
...........................................................................................................CTCGAATTGCATTGTGACTGAT-......................................................................................................................2211.00101
..........................................................................................................TCTCGAATTGCATTGTGACTGG........................................................................................................................2211.00110
..........................................................................................................TCTCGAATTGCATTGTGACTGAT-C.....................................................................................................................2411.00101
.............................................................................................................CGAATTGCATTGTGACTGAT-......................................................................................................................2011.00110
...............................................................................................................AATTGCATTGTGACTGAT-GA....................................................................................................................2011.00110
.........................................................................................................................................................AGTTAAAATGCCATTCGAGTT..........................................................................2111.00101
............................................................................................................TCGAATTGCATTGTGACTG.........................................................................................................................1911.00101
..........................................................................................................................................................GTTAAAATGCCATTCGAGTTA.........................................................................2111.00110
.........................................................................................................................................................AGTTAAAATGCCATTCGAGTTA.........................................................................2211.00101
..........................................................................................................TCTCGAATTGCATTGTGACTGAT-T.....................................................................................................................2411.00110

Generated: 10/20/2015 at 07:35 PM