ID:

dan_1298

 Coordinate:

scaffold_13117:1267737-1267887 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-18.8 -18.6 -18.4

Flybase annnotation

CDS [Dana\GF21054-cds]; exon [dana_GLEANR_4281:1]; intron [Dana\GF21054-in]

No Repeatable elements found

Sense Strand Reads

--------------####################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
TTAGATCATTAGTGATGTGGCAAATGGAACCGATGGTTCTAAATATATCGGTACGCCTAATCGATAGCCACTCACCTCTAGCAAAATGCAACCCTGACGCCACGCTATATTTTGACAGCTCCTCTCTTCGCTCTTTTTTCTTCAGCCGTTCGCCACTTCAAGATGGTAAATCCGTCCGCGGCCGAAATAAAATCTGTTATTTTCATAAACATCCGCTTGAATTTTGTGATGAAAACCAACCCAGCAAATAC
**************************************************...............(((...(((....((((....((((....)).))....)))).....)))..))).........((...((((..(((.(((((............(((((.....))))).))))).)))..))))...))....************************************************** 		Read size # Mismatch Hit Count Total Norm Total M058
embryo
 M044
female body
 V039
embryo
 V106
head
 V105
male body
........................................................................................................................................TTTCTTCAGCCGTTCGCCACT.............................................................................................. 21 0 1 5.00 5 2 3 0 0 0
........................................................................................................................................TTTCTTCAGCCGTTCGCCACTT............................................................................................. 22 0 1 5.00 5 3 0 2 0 0
.........................................................................................................................................TTCTTCAGCCGTTCGCCACT.............................................................................................. 20 0 1 4.00 4 2 1 1 0 0
.....................................................................................................................................TTTTTTCTTCAGCCGTTCGC.................................................................................................. 20 0 1 4.00 4 2 1 1 0 0
.......................................................................................................................................TTTTCTTCAGCCGTTCGCC................................................................................................. 19 0 1 3.00 3 3 0 0 0 0
...............................................................................................................................................AGCCGTTCGCCACTTCAAGAT....................................................................................... 21 0 1 3.00 3 2 0 1 0 0
........................................................................................................................................TGTCTTCAGCCGTTCGCCACTT............................................................................................. 22 1 1 2.00 2 2 0 0 0 0
........................................................................................................................................TTTCTTCAGCCGTTCGCCAC............................................................................................... 20 0 1 2.00 2 2 0 0 0 0
.........................................................................................................................................TTCTTCAGCCGTTCGCCACTTCAAG......................................................................................... 25 0 1 2.00 2 0 2 0 0 0
...............................................................................................................................................AGCCGTTCGCCACTTCAAGATGACG................................................................................... 25 3 1 2.00 2 2 0 0 0 0
...............................................................................................................................................AGCCGTTCGCCACTTCAAGATGAC.................................................................................... 24 2 1 2.00 2 1 1 0 0 0
.......................................................................................................................................TTTTCTTCAGCCGTTCGCCA................................................................................................ 20 0 1 2.00 2 0 1 0 0 1
..........................................................................................................................................TCTTCAGCCGTTCGCCACTTCAAGAT....................................................................................... 26 0 1 1.00 1 1 0 0 0 0
.....................................................................................................................GCTCCTCTCTTCGCTCTTTTTTC............................................................................................................... 23 0 1 1.00 1 1 0 0 0 0
........................................................................................................................................TTTCTTCAGCCGTTCGCCACC.............................................................................................. 21 1 1 1.00 1 1 0 0 0 0
.....................................................................................................................................CTTTTTCTTCAGCCGTTCGCCACC.............................................................................................. 24 2 1 1.00 1 1 0 0 0 0
..........................................................................................................................................TCTTCAGCCGTTAGCCACTTC............................................................................................ 21 1 1 1.00 1 1 0 0 0 0
......................................................................................................................................TTTTTCTTCAGCCGTTCGCCACTT............................................................................................. 24 0 1 1.00 1 0 0 1 0 0
............................................................................................................................................TTCAGCCGTTCGCCACTTC............................................................................................ 19 0 1 1.00 1 0 0 1 0 0
..........................................................................................................................................TCTTCAGCCGTTCGCCACTTCAAGA........................................................................................ 25 0 1 1.00 1 1 0 0 0 0
..........................................................................................................................................TCTTCAGCAGTTCGCCACTT............................................................................................. 20 1 1 1.00 1 0 0 1 0 0
.....................................................................................................................................TTTTTTCTTCAGCCGTTCGCCACT.............................................................................................. 24 0 1 1.00 1 1 0 0 0 0
...........................................................................................................................................CTTCAGCCGTTCGCCACT.............................................................................................. 18 0 1 1.00 1 1 0 0 0 0
..............................................................................................................................TTCGCTCTTTTTTCTTCAGCCGTTCGC.................................................................................................. 27 0 1 1.00 1 0 1 0 0 0
......................................................................................................................................TTTTTCTTCAGCCGTTCGC.................................................................................................. 19 0 1 1.00 1 1 0 0 0 0
.............................................................................................................................................TCAGCCGTTCGCCACTTCAA.......................................................................................... 20 0 1 1.00 1 0 1 0 0 0
.....................................................................................................................................TGTTTTCTTCAGCCGTTCGCC................................................................................................. 21 1 1 1.00 1 1 0 0 0 0
..........................................................................................................................................TCTTCAGCCGCTCGACACTT............................................................................................. 20 2 1 1.00 1 0 0 1 0 0
..............................................................................................................................................CAGCCGTTCGCCACTTCAAGAT....................................................................................... 22 0 1 1.00 1 0 0 1 0 0
......................................................................................................................................TTTTTCTTCAGCCGTTCGCCA................................................................................................ 21 0 1 1.00 1 0 1 0 0 0
..........................................................................................................................................TCTTCAGCCGTTCGCCACTT............................................................................................. 20 0 1 1.00 1 1 0 0 0 0
.........................................................................................................................................TTCTTCAGCCGTTCGCCAC............................................................................................... 19 0 1 1.00 1 1 0 0 0 0
..........................................................................................................................................TCTTCAACCGTTCGCCACTT............................................................................................. 20 1 1 1.00 1 0 0 1 0 0
.......................................................................................................................................TTTTCTTCAGCCGTTCGCCACC.............................................................................................. 22 1 1 1.00 1 1 0 0 0 0
..........................................................................................................................................TCTTCAGCCGTTCGCCACTTCAAG......................................................................................... 24 0 1 1.00 1 0 1 0 0 0
..............................................................................................................................................................CAAGATGGTAAATCCGTCCGCGGC..................................................................... 24 0 1 1.00 1 0 0 1 0 0
............................................................................................................................................TTCAGCCGTTCGCCACTTCAAGAT....................................................................................... 24 0 1 1.00 1 1 0 0 0 0
....................................................................................................................................CTTTTTTCTTCAGCCGTTCGCCACT.............................................................................................. 25 0 1 1.00 1 1 0 0 0 0
.....................................................................................................................................TTCTTTCTTCAGCCGTTCGC.................................................................................................. 20 1 1 1.00 1 1 0 0 0 0
.....................................................................................................................................TTTTTTCTTCAGCCGTTCAC.................................................................................................. 20 1 1 1.00 1 1 0 0 0 0
.....................................................................................................................................TTTTTTCTTCAGCCGTTCGCCACTTC............................................................................................ 26 0 1 1.00 1 1 0 0 0 0
...........................................................................................................................................CTTCAGCCGTTCGCCACTTCA........................................................................................... 21 0 1 1.00 1 0 0 0 1 0
.........................................................................................................................................TGCTTCAGCCGTTCGCCACTTCAAGA........................................................................................ 26 1 1 1.00 1 1 0 0 0 0
................................................................................................................................................GCCGTTCGCCACTTCAAGATGAC.................................................................................... 23 2 1 1.00 1 1 0 0 0 0
..............................................................................................................................................CAGCCGTTCGCCACTTCAA.......................................................................................... 19 0 1 1.00 1 0 1 0 0 0
........................................................................................................................................TTTCTTCAGCCGTTCGCCA................................................................................................ 19 0 1 1.00 1 0 1 0 0 0
........................................................................................................................................TTTCTTCAGCCGTTCGCCACTTCAAGA........................................................................................ 27 0 1 1.00 1 0 1 0 0 0
........................................................................................................................................TTTCTTCAGCCGTTCGCC................................................................................................. 18 0 1 1.00 1 1 0 0 0 0
.........................................................................................................................................TTATTCAGCCGTTCGCCACTT............................................................................................. 21 1 1 1.00 1 1 0 0 0 0
......................................................................................................................................TTTTTCTTCAGCCGTTCGCCACT.............................................................................................. 23 0 1 1.00 1 1 0 0 0 0
.........................................................................................................................................TTCCTCAGCCGTTCGCCACTTCAAGATG...................................................................................... 28 1 1 1.00 1 1 0 0 0 0
.......................................................................................................................................TTTTCTTCAGCCGTTCGCCACT.............................................................................................. 22 0 1 1.00 1 1 0 0 0 0
..........................................................................................................................................TCTTCAGCGGTTCGCCACTT............................................................................................. 20 1 1 1.00 1 0 1 0 0 0
...........................................................................................................................................CTTTAGCCGTTCGCCACTT............................................................................................. 19 1 1 1.00 1 1 0 0 0 0
........................................................................................................................................TTTCTTCAGCCGTTCTCCACT.............................................................................................. 21 1 1 1.00 1 1 0 0 0 0
...............................................................................................................................................AGCCGTTCGCCACTTCAAGA........................................................................................ 20 0 1 1.00 1 1 0 0 0 0
............................................................................................................................................TTCAGCCGTTCGCCACTTCAAG......................................................................................... 22 0 1 1.00 1 0 0 0 1 0
....................................................................................................................................CGTTTTTCTTCAGCCGTT..................................................................................................... 18 1 2 0.50 1 1 0 0 0 0
...................................................................................................................................................GTTCGCCACTTCAAGATGACG................................................................................... 21 3 4 0.25 1 0 0 1 0 0
....................................................................................................................................................TTCGCCACTTCAAGATGACG................................................................................... 20 3 19 0.05 1 0 1 0 0 0
...................................................................................AAATTCAACCTAGACGCCA..................................................................................................................................................... 19 3 19 0.05 1 1 0 0 0 0
............................................ATATCGGTACGGTTCATC............................................................................................................................................................................................. 18 3 20 0.05 1 0 0 1 0 0

Anti-sense strand reads

AATCTAGTAATCACTACACCGTTTACCTTGGCTACCAAGATTTATATAGCCATGCGGATTAGCTATCGGTGAGTGGAGATCGTTTTACGTTGGGACTGCGGTGCGATATAAAACTGTCGAGGAGAGAAGCGAGAAAAAAGAAGTCGGCAAGCGGTGAAGTTCTACCATTTAGGCAGGCGCCGGCTTTATTTTAGACAATAAAAGTATTTGTAGGCGAACTTAAAACACTACTTTTGGTTGGGTCGTTTATG
**************************************************...............(((...(((....((((....((((....)).))....)))).....)))..))).........((...((((..(((.(((((............(((((.....))))).))))).)))..))))...))....************************************************** 		Read size # Mismatch Hit Count Total Norm Total V106
head
 V105
male body		 M058
embryo
 V055
head
 V039
embryo
 M044
female body
..................................................CATGCGAATCAGCTATTGG...................................................................................................................................................................................... 19 3 3 0.33 1 1 0 0 0 0 0
..............................................................................................................................................................................................TTGGACAATAAAAGTGTTGGT........................................ 21 3 9 0.11 1 0 0 0 1 0 0
.........................................................................................................................GAGAGAAGCCAGAAAAAAA............................................................................................................... 19 2 14 0.07 1 0 0 0 0 1 0
.......................................................................................................................AGGAGAAAAGCGACAAAAA................................................................................................................. 19 2 15 0.07 1 0 0 1 0 0 0
...........................................................................................................................................GGAGTCGGCAGGCGGTGAT............................................................................................. 19 3 18 0.06 1 0 0 0 0 0 1
.........................................................................................................................................AATGAGTGGGCAAGCGGTG............................................................................................... 19 3 18 0.06 1 0 1 0 0 0 0
...............................................................................................CTGCGGTTCGAAATAAAATT........................................................................................................................................ 20 3 19 0.05 1 0 0 1 0 0 0
..........................................................................................................................AGAGAAACGAGAAACAAGA.............................................................................................................. 19 2 19 0.05 1 0 1 0 0 0 0
.............................................................................................................................TACGCGAGAAAAAAGAAG............................................................................................................ 18 2 20 0.05 1 0 0 1 0 0 0
......................................................................................................................................AAAAAGAAGTCGGCAACA................................................................................................... 18 2 20 0.05 1 0 0 0 1 0 0
...........................................................................................................................GAGAAGAGAGATAAAAGAA............................................................................................................. 19 2 20 0.05 1 0 1 0 0 0 0
.......................................................................................................................AGGAGACAACCGAGAAAAAAAA.............................................................................................................. 22 3 20 0.05 1 0 1 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droAna3 scaffold_13117:1267687-1267937 - dan_1298 TTA-G-ATCATTAGTGATGTGGCAAATGG-------------AACCGATGGTTCT---A--AATATATCGGTACGCCTAATCGATAGCCACTCACCTCTAGCAAAATGCAACCCTGACG---CC-ACGCTATAT---TTTGACAGCTCCTCTC----------------------------T-TCGCTCTTTTTTCTTCAGCCGTTCGCCACTTCAAGATGGTAAA-----T-----------CCGTCCGC----GG--CCGAAATAAAATCTGTTATTTTCATAAACATCCGCTTGAATTTTGT-GATGAAAA---CCAACCC--------------------------------AGCA---------AATAC
droBip1 scf7180000396425:846619-846868 + TCGCG-GGCAT-AGGGATGTACTAAA-AA-------------CGCCGATAGTGCC---A--TATATATCGGTTGGCTTAATCGATAGTTTCTCGTCTCTAGTAAAATGCAACCCTGACG---CC-ACGCTATAT---TTTGACAGCTCCTCTC----------------------------T-TCGCTCTTTTTTCTTCAGCCGTTCGCCACTTCAAGATGGTAAA--------------------TCCGTCCTCGG--CCGAAATAAAATCTATTATTTTCATAAACATCCGCTTGAATTTTGT-GATTAAAA---CCAATCC--------------------------------AATA---------CATAC
droKik1 scf7180000299277:477936-478079 - -----------------------------------------------------------------------------------------------------------------------------------------------------TGTCATCTCC--------------------TCTTCCGCTCTTTCTTTTTCTACCGTTCGCCTC-TCAAGATGGTGCG-----T--AAGAG---A---CCCACGTTAGC-TCCAAAATAAAATCGCTCCAATTCCCGGCCATCAGTGACAATTTTGC-GACTAAAG---TG-CGCC--------------------------------GCTC---------AAAGA
droFic1 scf7180000454038:241255-241453 - -------------------------------------------------------------------------------------------------------AAGTGCAACCCTGCGG---CG-GCGCCATAT---TGTGACAGCAGCTGTCAACTTC-----TCTCCGCTCTTGTTCTTTCTTTCTCTTTCTCGTTCAACCGTTCGCCAC-TCAAGATGGTGCG-----T--AA----AAT---TCCACGTTAAA--CCGAAATTAAATCGCCGAATTTCCGAAGCATCCCAACGAGTTTTGC-CAATAAAC---CG-ATAC--------------------------------GTTAATT------TAGAC
droEle1 scf7180000491011:6945-7139 - CGACG---------------------------------------------------------------------------------GTCACACTGCTCT-CCAAAATGCAGCCCTGCGC---GT-CGGCCATAT---TGTGACAGCAGCTGTCAATTGC--------------------GCTCTTCCTCTTTCTTTTTCGACCGTTCGCCAC-TCAAGATGGTGCG-----T--AGCAA---A---TTCTCGTAAAA--CCGAATTAAAATCGCCTAATTACTGAGACATCCCACTGAATTTACGCGAA-ATAA---AA-ATAC--------------------------------G-----------------
droRho1 scf7180000777097:499563-499786 + ------------------------------------------------------------------------------------------------------AAAATGCAGCCCTGCGC---AG-CGGCCATAT---TGTGACAGCAGCTGTCAATACC--------------------GCTCTTCCTCTTTCTTTTTCGACCGTTCGCCGC-TCAAGATGGTGCG-----C--AGCAA---A---TTCTCGTTTAA--CCGAAATAAAATCGCCTAATTTCCAAAACATCCCACTGAATTTCCGCGAA-ATAA---CA-ATACGTTTATTGAGTGGTCGCTTTGAAGAGTGCGAATTTCATAGAATTCGACAC
droBia1 scf7180000299226:403342-403518 + ---------------------------------------------------------------------------------------------------------ATGCAACCCTGCCG---CC-ACGCCATAT---TGTGACAGCGGCTGTCAACTTC--------------------TCTTTCGCTCTTTCTTGTTCAACCGTTCGCCAC-ACAAGATGGTGCG-----T--AAAAG---A---TCCACGTTAAA--GCGAAATAAAATCGCCGAATTTCCGAGCCATCCCGAGTGATTTGCT-AAAGAAAA---GG-CCGC--------------------------------CCCA------------AT
droEug1 scf7180000409533:131123-131304 - -------------------------------------------------------------------------------------------------------AAATGCAACCCTGCAG---CG-ACGCCATAT---TGTGACAGCCGCTGTCAATTTC--------------------TCTTTCGCTCTTTCTTGTTCAACCGTTCGCCAC-ACAAGATGGTGCG-----T--AAAAA---A---TCCACGTTAAA--CCGAAATAAAATCGCCGAATTTCCCAAGCATCGTGAATGATTTTGT-GAAGTAAA---CG-ATAC--------------------------------GTTA---------ATTAT
dp5 XL_group1a:1891918-1892082 + -------------------------------------------------------------------------------------------------------AAATGCAACTCTGCCA---AC-ACGCCATAT---TGTGACAGCCACTGTC----------------------------TTGCTCTCTTTCTTCTTAGACCATTCGCCAT-ACAAGATGGTAAT-----TGA--A--AATT---TTTATGTTTTA--TCAGAAAAAAATCGCCAAATTTTTGTGACATCCGTATATATTTCGG-TTTAAAA----------------------------------------------A---------AATTG
droPer2 scaffold_28:337970-338134 + -------------------------------------------------------------------------------------------------------AAATGCAACTCTGCCA---AC-ACGCCATAT---TGTGACAGCCACTGTC----------------------------TTGCTCTCTTTCTTCTTAGACCATTCGCCAT-ACAAGATGGTAAT-----TGA--A--AATT---TTTATGTTTTA--TCAGAAAAAAATCGCCAAATTTTTGTGACATCCGTATATATTTCGG-TTTAAAA----------------------------------------------A---------AATGA
droWil2 scf2_1100000004590:2380429-2380713 + ACA-GCTGCATTGATAACCTTTCACATAACTATCGATATACCGACCTATGTAGATAACATGTAGATATTATTAGAC---ATCGATAGATC------------CCAAAGCAACCCTTCGTGCTAC-ACGCCAAAT---TGTGACAGCAGCTGTCAAAATT--------------------CCTATCGGCCTTTCTTCTTTGAGCGTTCGCCAT-ACAAGATGGTAGGTTAACG------AAATT---TCCACGTTCAA-GCCTAAATAAAATCGTCAAATTTCTGTGCCATCCTATGTGATTTTGT-AAAAAAGAAAGTG-ATTT--------------------------------ACTAATG----TGTACAC
droVir3 scaffold_13042:1911090-1911308 - C-----------------------------------------------------------------------------------------------TGTAGCCGTGTGCAACCCTGCCA---GC-ACGCCATATT--TGTGACAGCTGCTGTCAAACTGACATTTGTGCGCTGGGCCTCTCTTTCGCTCTTTCTTCTACGAGCGTTCGCCAT-ACAAGATGGTGTGTTAACAAA--A--AAA-TTATCCACGTTCAA-GCCAAAATAAAATCGCCAATTTCACTAAACATCCGCGCATATTTTTT-ATTGAAAA---T--ATAC--------------------------------TGTA---------AATTT
droMoj3 scaffold_6359:1820089-1820292 - ----------------------------------------------------------------------------------------------------------TGCAACCCTGTCA---GC-ACGCCATGTTTATGCGACAGCTGCTGTCAAATTGACATTCGCTTGATTCGCCTCTCTTTCGCTCTTTCTTCTACGAGCGTTCGCCAC-ACAAGATGGTGCGTCAACG-A--A--AAT-TTATCCACGTTCAAAGCCAAAATAAAATCGTCAATTTCTTTATGCATCCGCGGATATTTTTT-AATGAAAC---CC----------------------------------------A---------AATAC
droGri2 scaffold_14853:3268111-3268316 - ----------------------------------------------------------------------------------------------------------TGCAACCCTGCAG---CGTACGCCATAT---TGTGACAGCTGCTGTCAAACTGAAGTTTGTGTGCTACGCCTCTCTCTCGCTCTTTCTTCTACGAGCGTTCGCCAC-ACAAGATGGTGCGTCAATA------AAAT-TTATCCACGTTCAA-GCCGAAATAAAATCGCCAATTTCTATTAGCATCCGATTATATTTTTA--ACTAAAA---TC-ATAT--------------------------------TGCA---------ATTAT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droAna3
TTA-G-ATCATTAGTGATGTGGCAAATGG-------------AACCGATGGTTCT---A--AATATATCGGTACGCCTAATCGATAGCCACTCACCTCTAGCAAAATGCAACCCTGACG---CC-ACGCTATAT---TTTGACAGCTCCTCTC----------------------------T-TCGCTCTTTTTTCTTCAGCCGTTCGCCACTTCAAGATGGTAAA-----T-----------CCGTCCGC----GG--CCGAAATAAAATCTGTTATTTTCATAAACATCCGCTTGAATTTTGT-GATGAAAA---CCAACCC--------------------------------AGCA---------AATACSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
................................................................................................................................................................................................TTTCTTCAGCCGTTCGCCACT.................................................................................................................................................................2115.005320000
................................................................................................................................................................................................TTTCTTCAGCCGTTCGCCACTT................................................................................................................................................................2215.005032000
.................................................................................................................................................................................................TTCTTCAGCCGTTCGCCACT.................................................................................................................................................................2014.004121000
.............................................................................................................................................................................................TTTTTTCTTCAGCCGTTCGC.....................................................................................................................................................................2014.004121000
...............................................................................................................................................................................................TTTTCTTCAGCCGTTCGCC....................................................................................................................................................................1913.003030000
.......................................................................................................................................................................................................AGCCGTTCGCCACTTCAAGAT..........................................................................................................................................................2113.003021000
................................................................................................................................................................................................TTTCTTCAGCCGTTCGCCAC..................................................................................................................................................................2012.002020000
.................................................................................................................................................................................................TTCTTCAGCCGTTCGCCACTTCAAG............................................................................................................................................................2512.002200000
.......................................................................................................................................................................................................AGCCGTTCGCCACTTCAAGATGACG......................................................................................................................................................2512.002020000
.......................................................................................................................................................................................................AGCCGTTCGCCACTTCAAGATGAC.......................................................................................................................................................2412.002110000
...............................................................................................................................................................................................TTTTCTTCAGCCGTTCGCCA...................................................................................................................................................................2012.002100010
..................................................................................................................................................................................................TCTTCAGCCGTTCGCCACTTCAAGAT..........................................................................................................................................................2611.001010000
................................................................................................................................................GCTCCTCTC----------------------------T-TCGCTCTTTTTTC..................................................................................................................................................................................2311.001010000
................................................................................................................................................................................................TTTCTTCAGCCGTTCGCCACC.................................................................................................................................................................2111.001010000
..............................................................................................................................................................................................TTTTTCTTCAGCCGTTCGCCACTT................................................................................................................................................................2411.001001000
....................................................................................................................................................................................................TTCAGCCGTTCGCCACTTC...............................................................................................................................................................1911.001001000
..................................................................................................................................................................................................TCTTCAGCCGTTCGCCACTTCAAGA...........................................................................................................................................................2511.001010000
.............................................................................................................................................................................................TTTTTTCTTCAGCCGTTCGCCACT.................................................................................................................................................................2411.001010000
...................................................................................................................................................................................................CTTCAGCCGTTCGCCACT.................................................................................................................................................................1811.001010000
.....................................................................................................................................................................................T-TCGCTCTTTTTTCTTCAGCCGTTCGC.....................................................................................................................................................................2711.001100000
..............................................................................................................................................................................................TTTTTCTTCAGCCGTTCGC.....................................................................................................................................................................1911.001010000
.....................................................................................................................................................................................................TCAGCCGTTCGCCACTTCAA.............................................................................................................................................................2011.001100000
......................................................................................................................................................................................................CAGCCGTTCGCCACTTCAAGAT..........................................................................................................................................................2211.001001000
..............................................................................................................................................................................................TTTTTCTTCAGCCGTTCGCCA...................................................................................................................................................................2111.001100000
..................................................................................................................................................................................................TCTTCAGCCGTTCGCCACTT................................................................................................................................................................2011.001010000
.................................................................................................................................................................................................TTCTTCAGCCGTTCGCCAC..................................................................................................................................................................1911.001010000
...............................................................................................................................................................................................TTTTCTTCAGCCGTTCGCCACC.................................................................................................................................................................2211.001010000
..................................................................................................................................................................................................TCTTCAGCCGTTCGCCACTTCAAG............................................................................................................................................................2411.001100000
......................................................................................................................................................................................................................CAAGATGGTAAA-----T-----------CCGTCCGC----GG--C..................................................................................................................2411.001001000
....................................................................................................................................................................................................TTCAGCCGTTCGCCACTTCAAGAT..........................................................................................................................................................2411.001010000
............................................................................................................................................................................................CTTTTTTCTTCAGCCGTTCGCCACT.................................................................................................................................................................2511.001010000
.............................................................................................................................................................................................TTTTTTCTTCAGCCGTTCGCCACTTC...............................................................................................................................................................2611.001010000
...................................................................................................................................................................................................CTTCAGCCGTTCGCCACTTCA..............................................................................................................................................................2111.001000001
........................................................................................................................................................................................................GCCGTTCGCCACTTCAAGATGAC.......................................................................................................................................................2311.001010000
......................................................................................................................................................................................................CAGCCGTTCGCCACTTCAA.............................................................................................................................................................1911.001100000
................................................................................................................................................................................................TTTCTTCAGCCGTTCGCCA...................................................................................................................................................................1911.001100000
................................................................................................................................................................................................TTTCTTCAGCCGTTCGCCACTTCAAGA...........................................................................................................................................................2711.001100000
................................................................................................................................................................................................TTTCTTCAGCCGTTCGCC....................................................................................................................................................................1811.001010000
..............................................................................................................................................................................................TTTTTCTTCAGCCGTTCGCCACT.................................................................................................................................................................2311.001010000
...............................................................................................................................................................................................TTTTCTTCAGCCGTTCGCCACT.................................................................................................................................................................2211.001010000
.......................................................................................................................................................................................................AGCCGTTCGCCACTTCAAGA...........................................................................................................................................................2011.001010000
....................................................................................................................................................................................................TTCAGCCGTTCGCCACTTCAAG............................................................................................................................................................2211.001000001
...........................................................................................................................................................................................................GTTCGCCACTTCAAGATGACG......................................................................................................................................................2140.251001000
............................................................................................................................................................................................................TTCGCCACTTCAAGATGACG......................................................................................................................................................20190.051100000
droBip1
TCGCG-GGCAT-AGGGATGTACTAAA-AA-------------CGCCGATAGTGCC---A--TATATATCGGTTGGCTTAATCGATAGTTTCTCGTCTCTAGTAAAATGCAACCCTGACG---CC-ACGCTATAT---TTTGACAGCTCCTCTC----------------------------T-TCGCTCTTTTTTCTTCAGCCGTTCGCCACTTCAAGATGGTAAA--------------------TCCGTCCTCGG--CCGAAATAAAATCTATTATTTTCATAAACATCCGCTTGAATTTTGT-GATTAAAA---CCAATCC--------------------------------AATA---------CATACSizeHit CountTotal NormTotal
No Reads
droKik1
-----------------------------------------------------------------------------------------------------------------------------------------------------TGTCATCTCC--------------------TCTTCCGCTCTTTCTTTTTCTACCGTTCGCCTC-TCAAGATGGTGCG-----T--AAGAG---A---CCCACGTTAGC-TCCAAAATAAAATCGCTCCAATTCCCGGCCATCAGTGACAATTTTGC-GACTAAAG---TG-CGCC--------------------------------GCTC---------AAAGASizeHit CountTotal NormTotal
No Reads
droFic1
-------------------------------------------------------------------------------------------------------AAGTGCAACCCTGCGG---CG-GCGCCATAT---TGTGACAGCAGCTGTCAACTTC-----TCTCCGCTCTTGTTCTTTCTTTCTCTTTCTCGTTCAACCGTTCGCCAC-TCAAGATGGTGCG-----T--AA----AAT---TCCACGTTAAA--CCGAAATTAAATCGCCGAATTTCCGAAGCATCCCAACGAGTTTTGC-CAATAAAC---CG-ATAC--------------------------------GTTAATT------TAGACSizeHit CountTotal NormTotal
No Reads
droEle1
CGACG---------------------------------------------------------------------------------GTCACACTGCTCT-CCAAAATGCAGCCCTGCGC---GT-CGGCCATAT---TGTGACAGCAGCTGTCAATTGC--------------------GCTCTTCCTCTTTCTTTTTCGACCGTTCGCCAC-TCAAGATGGTGCG-----T--AGCAA---A---TTCTCGTAAAA--CCGAATTAAAATCGCCTAATTACTGAGACATCCCACTGAATTTACGCGAA-ATAA---AA-ATAC--------------------------------G-----------------SizeHit CountTotal NormTotal
No Reads
droRho1
------------------------------------------------------------------------------------------------------AAAATGCAGCCCTGCGC---AG-CGGCCATAT---TGTGACAGCAGCTGTCAATACC--------------------GCTCTTCCTCTTTCTTTTTCGACCGTTCGCCGC-TCAAGATGGTGCG-----C--AGCAA---A---TTCTCGTTTAA--CCGAAATAAAATCGCCTAATTTCCAAAACATCCCACTGAATTTCCGCGAA-ATAA---CA-ATACGTTTATTGAGTGGTCGCTTTGAAGAGTGCGAATTTCATAGAATTCGACACSizeHit CountTotal NormTotal
No Reads
droBia1
---------------------------------------------------------------------------------------------------------ATGCAACCCTGCCG---CC-ACGCCATAT---TGTGACAGCGGCTGTCAACTTC--------------------TCTTTCGCTCTTTCTTGTTCAACCGTTCGCCAC-ACAAGATGGTGCG-----T--AAAAG---A---TCCACGTTAAA--GCGAAATAAAATCGCCGAATTTCCGAGCCATCCCGAGTGATTTGCT-AAAGAAAA---GG-CCGC--------------------------------CCCA------------ATSizeHit CountTotal NormTotal
No Reads
droEug1
-------------------------------------------------------------------------------------------------------AAATGCAACCCTGCAG---CG-ACGCCATAT---TGTGACAGCCGCTGTCAATTTC--------------------TCTTTCGCTCTTTCTTGTTCAACCGTTCGCCAC-ACAAGATGGTGCG-----T--AAAAA---A---TCCACGTTAAA--CCGAAATAAAATCGCCGAATTTCCCAAGCATCGTGAATGATTTTGT-GAAGTAAA---CG-ATAC--------------------------------GTTA---------ATTATSizeHit CountTotal NormTotal
No Reads
dp5
-------------------------------------------------------------------------------------------------------AAATGCAACTCTGCCA---AC-ACGCCATAT---TGTGACAGCCACTGTC----------------------------TTGCTCTCTTTCTTCTTAGACCATTCGCCAT-ACAAGATGGTAAT-----TGA--A--AATT---TTTATGTTTTA--TCAGAAAAAAATCGCCAAATTTTTGTGACATCCGTATATATTTCGG-TTTAAAA----------------------------------------------A---------AATTGSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...............................................................................................................................................................................................TCTTCTTAGACCATTCGCCAT-ACAAGA...........................................................................................................................................................2717.0070700000000
..................................................................................................................................................................................................TCTTAGACCATTCGCCAT-ACAAGA...........................................................................................................................................................2415.0050500000000
....................................................................................................................................................................................................TTAGACCATTCGCCAT-ACAAGATGAC.......................................................................................................................................................2613.0030300000000
............................................................................................................................................................................................CTTTCTTCTTAGACCATTCGCC....................................................................................................................................................................2213.0030200100000
....................................................................................................................................................................................................TTAGACCATTCGCCAT-ACAAGATGA........................................................................................................................................................2512.0020200000000
................................................................................................................................................................................................CTTCTTAGACCATTCGCCAT-.................................................................................................................................................................2012.0020100100000
.............................................................................................................................................................................................TTTCTTCTTAGACCATTCGCC....................................................................................................................................................................2112.0020200000000
................................................................................................................................................................................................CTTCTTAGACCATTCGCC....................................................................................................................................................................1812.0020200000000
.................................................................................................................................................................................................TTCTTAGACCATTCGCCAT-ACAAGA...........................................................................................................................................................2511.0010100000000
..................................................................................................................................................................................................TCTTAGACCATTCGCCAT-ACAAGATGA........................................................................................................................................................2711.0010100000000
...............................................................................................................................................................................................TCTTCTTAGACCATTCGCCAT-ACAAG............................................................................................................................................................2611.0010100000000
..............................................................................................................................................................................................TTCTTCTTAGACCATTCGCCAT-.................................................................................................................................................................2211.0010000100000
......................................................................................................................................................................................................AGACCATTCGCCAT-ACAAGATGACG......................................................................................................................................................2511.0010100000000
...................................................................................................................................................................................................CTTAGACCATTCGCCAT-ACAAGAT..........................................................................................................................................................2411.0010010000000
...............................................................................................................CTCTGCCA---AC-ACGCCATAT---TGTGACAGC....................................................................................................................................................................................................................................2811.0010100000000
...............................................................................................................................................................................................TCTTCTTAGACCATTCGCCAT-A................................................................................................................................................................2211.0010100000000
........................................................................................................................................................C----------------------------TTGCTCTCTTTCTTCTTAGACCATT........................................................................................................................................................................2611.0010100000000
.....................................................................................................................................................................................................TAGACCATTCGCCAT-ACAAGATGACG......................................................................................................................................................2611.0010100000000
.........................................................................................................................................TGTGACAGCCACTGTC----------------------------TTGCTCTCTTT......................................................................................................................................................................................2711.0010100000000
...................................................................................................................................................................................................CTTAGACCATTCGCCAT-ACAAGATGAC.......................................................................................................................................................2711.0010010000000
..........................................................................................................TGCAACTCTGCCA---AC-ACGCCATAT---TG...........................................................................................................................................................................................................................................2611.0010100000000
...............................................................................................................................................................................................TCTTCTTAGACCATTCGCCAT-ACAA.............................................................................................................................................................2511.0010100000000
.......................................................................................................................................................................................................GACCATTCGCCAT-ACAAGATGAC.......................................................................................................................................................2311.0010010000000
...............................................................................................................................................................................................TCTTCTTAGACCATTCGCCAT-AC...............................................................................................................................................................2311.0010001000000
..............................................................................................................................................................................................TTCTTCTTAGACCATTCGCCAT-ACAAGA...........................................................................................................................................................2811.0010100000000
..................................................................................................................................................................................................TCTTAGACCATTCGCCAT-AC...............................................................................................................................................................2011.0010010000000
...................................................................................................................................................................................................CTTAGACCATTCGCCAT-A................................................................................................................................................................1811.0010100000000
droPer2
-------------------------------------------------------------------------------------------------------AAATGCAACTCTGCCA---AC-ACGCCATAT---TGTGACAGCCACTGTC----------------------------TTGCTCTCTTTCTTCTTAGACCATTCGCCAT-ACAAGATGGTAAT-----TGA--A--AATT---TTTATGTTTTA--TCAGAAAAAAATCGCCAAATTTTTGTGACATCCGTATATATTTCGG-TTTAAAA----------------------------------------------A---------AATGASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
................................................................................................................................................................................................CTTCTTAGACCATTCGCC....................................................................................................................................................................1826.50131201000
....................................................................................................................................................................................................................................................................................AATTTTTGTGACATCCGTATATATTTC.......................................................................2714.004400000
...............................................................................................................................................................................................TCTTCTTAGACCATTCGCC....................................................................................................................................................................1923.006501000
............................................................................................................................................................................................CTTTCTTCTTAGACCATTCGCC....................................................................................................................................................................2222.004301000
..................................................................................................................................................................................................................AT-ACAAGATGGTAAT-----TGA--..........................................................................................................................................1811.001010000
......................................................................................................................................................................................TGCTCTCTTTCTTCTTAGACCATTCGCCA...................................................................................................................................................................2911.001010000
............................................................................................................CAACTCTGCCA---AC-ACGCCATAT---TG...........................................................................................................................................................................................................................................2411.001010000
.........................................................................................................................................TGTGACAGCCACTGTC----------------------------TTGCTCTCTTTC.....................................................................................................................................................................................2811.001010000
...................................................................................................................................TAT---TGTGACAGCCACTGTC----------------------------TTGCTC...........................................................................................................................................................................................2511.001010000
..........................................................................................................TGCAACTCTGCCA---AC-ACGCCATAT---TG...........................................................................................................................................................................................................................................2611.001010000
...............................................................................................................................................................................................TCTTCTTAGACCATTCGCCAT-A................................................................................................................................................................2220.501010000
..............................................................................................................................................................................................TTCTTCTTAGACCATTCGCC....................................................................................................................................................................2020.501100000
...................................................................................................................................................................................................CTTAGACCATTCGCCAT-ACA..............................................................................................................................................................2020.501100000
...............................................................................................................................................................................................TCTTCTTAGACCATTCGCCAT-ACAAGA...........................................................................................................................................................2720.501010000
.....................................................................................................................................................................................................TAGACCATTCGCCAT-ACAA.............................................................................................................................................................1920.501001000
droWil2
ACA-GCTGCATTGATAACCTTTCACATAACTATCGATATACCGACCTATGTAGATAACATGTAGATATTATTAGAC---ATCGATAGATC------------CCAAAGCAACCCTTCGTGCTAC-ACGCCAAAT---TGTGACAGCAGCTGTCAAAATT--------------------CCTATCGGCCTTTCTTCTTTGAGCGTTCGCCAT-ACAAGATGGTAGGTTAACG------AAATT---TCCACGTTCAA-GCCTAAATAAAATCGTCAAATTTCTGTGCCATCCTATGTGATTTTGT-AAAAAAGAAAGTG-ATTT--------------------------------ACTAATG----TGTACACSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.....................................................................................................................................................................................................TTGAGCGTTCGCCAT-ACAAGATGAC.......................................................................................................................................................2514.00400040
..............................................................................................................................................................................................TTCTTCTTTGAGCGTTCGCC....................................................................................................................................................................2013.00330000
...........................................................................................................................................................................................................GTTCGCCAT-ACAAGATGA........................................................................................................................................................1813.00300030
................................................................................................................................................................................................CTTCTTTGAGCGTTCGCC....................................................................................................................................................................1812.00210010
..........................................................................................................................................................................................................CGTTCGCCAT-ACAAGATGAC.......................................................................................................................................................2012.00200020
..............................................................................................................................................................................................TTCTTCTTTGAGCGTTCGCCAT-ACAAGA...........................................................................................................................................................2812.00202000
................................................................................................................................................................................................CTTCTTTGAGCGTTCGCCAT-ACAAGA...........................................................................................................................................................2612.00201100
................................................................................................................................................................................................................................................ATT---TCCACGTTCAA-GCCT................................................................................................................1812.00200020
...........................................................................................................................................................................................................GTTCGCCAT-ACAAGATGAC.......................................................................................................................................................1921.00201010
...................................................................................................................................................................................................................T-ACAAGATGGTAGGTTAACG------AAATT---................................................................................................................................2511.00100001
..................................................................................................................................................................................................................AT-ACAAGATGGTAGGTTAACG------AA......................................................................................................................................2311.00100010
..................................................................................................................................................................................................TCTTTGAGCGTTCGCCAT-ACAAGA...........................................................................................................................................................2411.00100010
.....................................................................................................................................................................................................TTGAGCGTTCGCCAT-ACA..............................................................................................................................................................1811.00100010
........................................................................................................................................................................................................AGCGTTCGCCAT-ACAAGATGGT.......................................................................................................................................................2211.00100010
..................................................................................................................................................................................................TCTTTGAGCGTTCGCCAT-ACAAGATGACG......................................................................................................................................................2911.00100100
..........................................................................................................................................................AAATT--------------------CCTATCGGCCTTTCTTC..................................................................................................................................................................................2211.00100010
.....................................................................................................................................................................................................................ACAAGATGGTAGGTTAAC...............................................................................................................................................1811.00100010
.............................................................................................................................................................................................TTTCTTCTTTGAGCGTTCGCC....................................................................................................................................................................2111.00100010
.......................................................................................................................................................................................................................AAGATGGTAGGTTAACG------A.......................................................................................................................................1811.00100001
.....................................................................................................................................................................................................TTGAGCGTTCGCCAT-ACAAGATGG........................................................................................................................................................2411.00100010
......................................................................................................................................................................................................................CAAGATGGTAGGTTAACG------AAAT....................................................................................................................................2211.00100001
.....................................................................................................................................................................................................TTGAGCGTTCGCCAT-ACAAGA...........................................................................................................................................................2111.00100010
...................................................................................................................................................................................................CTTTGAGCGTTCGCCAT-A................................................................................................................................................................1811.00101000
....................................................................................................................................................................................................TTTGAGCGTTCGCCAT-ACAAGATGAC.......................................................................................................................................................2611.00100010
.....................................................................................................................................................................................................................ACAAGATGGTAGGTTAACG------AAAT....................................................................................................................................2311.00100001
......................................................................................................................................................................................................TGAGCGTTCGCCAT-ACAAGATGAC.......................................................................................................................................................2411.00100010
...................................................................................................................................................................................................CTTTGAGCGTTCGCCAT-ACAAGATGAC.......................................................................................................................................................2711.00100010
..............................................................................................................................................................................................TTCTTCTTTGAGCGTTCGCCAT-ACAA.............................................................................................................................................................2611.00101000
droVir3
C-----------------------------------------------------------------------------------------------TGTAGCCGTGTGCAACCCTGCCA---GC-ACGCCATATT--TGTGACAGCTGCTGTCAAACTGACATTTGTGCGCTGGGCCTCTCTTTCGCTCTTTCTTCTACGAGCGTTCGCCAT-ACAAGATGGTGTGTTAACAAA--A--AAA-TTATCCACGTTCAA-GCCAAAATAAAATCGCCAATTTCACTAAACATCCGCGCATATTTTTT-ATTGAAAA---T--ATAC--------------------------------TGTA---------AATTTSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.............................................................................................................................................................................................TTTCTTCTACGAGCGTTCGCC....................................................................................................................................................................21110.0010002301000000000000000000000000000000000000000000000000000001003
..............................................................................................................................................................................................TTCTTCTACGAGCGTTCGCC....................................................................................................................................................................2018.008006000000000000000000100000000000000000000000000000000000000010
............................................................................................................................................................................................CTTTCTTCTACGAGCGTTCGCC....................................................................................................................................................................2217.007101400000000000000000000000000000000000000000000000000000001000
................................................................................................................................................................................................CTTCTACGAGCGTTCGCC....................................................................................................................................................................1816.006104100000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................TTCTTCTACGAGCGTTCGC.....................................................................................................................................................................1913.003000000000000000000000000000000000000000000000000000000000000003
....................................................................................................................................................................................................TACGAGCGTTCGCCAT-ACAAGATGAC.......................................................................................................................................................2613.003000000000000001001000000000000000001000000000000000000000000000
.....................................................................................................................................................................................................ACGAGCGTTCGCCAT-ACAAGATGAC.......................................................................................................................................................2513.003000200000000000000000000000000000000100000000000000000000000000
...............................................................................................................................................................................................TCTTCTACGAGCGTTCGCC....................................................................................................................................................................1913.003001000000000000000000000000000000000000000000000000000000000002
...........................................................................................................................................................................................................GTTCGCCAT-ACAAGATGAC.......................................................................................................................................................1913.003001100000000000001000000000000000000000000000000000000000000000
.................................................................................................................................................................................................TTCTACGAGCGTTCGCCAT-AC...............................................................................................................................................................2112.002000000000000000000000000000000000000000000000000000000000000002
................................................................................................................................................................................................CTTCTACGAGCGTTCGCCAT-.................................................................................................................................................................2012.002000000000000000000000000000000000000000000000000000000000000002
.....................................................................................................................................................................................................ACGAGCGTTCGCCAT-ACAAG............................................................................................................................................................2012.002002000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................ACGAGCGTTCGCCAT-ACAAGAT..........................................................................................................................................................2212.002000200000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................TTCTACGAGCGTTCGCCAT-A................................................................................................................................................................2012.002000000000000000000000000000000000000000000000000000000000000002
............................................................................................................................................................................................CTTTCTTCTACGAGCGTTC.......................................................................................................................................................................1912.002001000000000010000000000000000000000000000000000000000000000000
............................................................................................................................................................................................CTTTCTTCTACGAGCGTTCG......................................................................................................................................................................2012.002000000200000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................CTACGAGCGTTCGCCAT-ACA..............................................................................................................................................................2012.002000000000000000000000000000000010000000000000000000000000001000
...................................................................................................................................................................................................CTACGAGCGTTCGCCAT-A................................................................................................................................................................1812.002000100000000000000000000000000000000000000000000000000000000001
.............................................................................................................................................................................................TTTCTTCTACGAGCGTTCGC.....................................................................................................................................................................2012.002000000000000000000000000000000000000000000000000000000000001010
................................................................................................................................................................................................CTTCTACGAGCGTTCGCCAT-AC...............................................................................................................................................................2212.002000000000000000001000000000000000000000000000000000000000000001
.........................................................................................................................................................................................GCTCTTTCTTCTACGAGCGTTCGCC....................................................................................................................................................................2512.002100100000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................TTCTACGAGCGTTCGCCAT-.................................................................................................................................................................1912.002000000000000000000000000000000000000000000000000000000000000002
................................................................................................................................................................................................CTTCTACGAGCGTTCGC.....................................................................................................................................................................1712.002000000000000000000000000000000000000000000000000000000000000002
................................................................................................................................................................................................CTTCTACGAGCGTTCGCCA...................................................................................................................................................................1912.002001100000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................TGGTGTGTTAACAAA--A--AAA-TTA................................................................................................................................2211.001000000000000000000000000001000000000000000000000000000000000000
..............................................................................................................................................................................................TTCTTCTACGAGCGTTCGCCAT-AA...............................................................................................................................................................2411.001000000000000000000000000000001000000000000000000000000000000000
...................................................................................................................................................................................................CTACGAGCGTTCGCCAT-ACAA.............................................................................................................................................................2111.001000000000000000001000000000000000000000000000000000000000000000
....................................................................................................................................................................................................TACGAGCGTTCGCCAT-ACAAGA...........................................................................................................................................................2211.001000100000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................GCCAATTTCACTAAACATCCG.................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................AGCGTTCGCCAT-ACAAGA...........................................................................................................................................................1811.001001000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................TTGTGCGCTGGGCCTCTC.................................................................................................................................................................................................1811.001001000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................TACGAGCGTTCGCCAT-ACAAGAT..........................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................AGCGTTCGCCAT-ACAAGATGGTGTG....................................................................................................................................................2511.001000000000000000001000000000000000000000000000000000000000000000
..............................................................................................................................................................GACATTTGTGCGCTGGGC......................................................................................................................................................................................................1811.001010000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................CTACGAGCGTTCGCCAT-ACAAGAT..........................................................................................................................................................2411.001001000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................CTTCTACGAGCGTTCGCCAT-A................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000001
.............................................................................................................................................................................................TTTCTTCTACGAGCGTTCGCCA...................................................................................................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................GCTCTTTCTTCTACGAGCGTTCGCCAT-ACAAGATGG........................................................................................................................................................3611.001000000000000000000000000000000000000000000000000000100000000000
....................................................................................................................................................................TGTGCGCTGGGCCTCTCTTTCGCTTG........................................................................................................................................................................................2611.001001000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................TCTACGAGCGTTCGCC....................................................................................................................................................................1611.001000000000000000000000000000000000000000000000000000000001000000
..........................................................................................................................................................................................................CGTTCGCCAT-ACAAGAT..........................................................................................................................................................1711.001000000000000000000000000000000000000000000000000001000000000000
...............................................................................................................................................................................................TCTTCTACGAGCGTTCGCCAT-.................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................TACGAGCGTTCGCCAT-ACA..............................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................CTTTCGCTCTTTCTTCTACGAGCGTT........................................................................................................................................................................2611.001000000000010000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................CGCTCTTTCTTCTACGAGCGTTCGC.....................................................................................................................................................................2511.001000000000000000000100000000000000000000000000000000000000000000
................................................................................................................................................................................................CTTCTACGAGCGTTCGCCAT-ACA..............................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................CTCTCTTTCGCTCTTTCTTCTACGAGC...........................................................................................................................................................................2711.001000100000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................GGGCCTCTCTTTCGCTCTT.......................................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................CTTTCTTCTACGAGCGTTCGCCAT-ACA..............................................................................................................................................................2711.001000000000000000000000000000000000000001000000000000000000000000
............................................................................................................................................................................................CTTTCTTCTACGAGCGTTCGC.....................................................................................................................................................................2111.001000100000000000000000000000000000000000000000000000000000000000
droMoj3
----------------------------------------------------------------------------------------------------------TGCAACCCTGTCA---GC-ACGCCATGTTTATGCGACAGCTGCTGTCAAATTGACATTCGCTTGATTCGCCTCTCTTTCGCTCTTTCTTCTACGAGCGTTCGCCAC-ACAAGATGGTGCGTCAACG-A--A--AAT-TTATCCACGTTCAAAGCCAAAATAAAATCGTCAATTTCTTTATGCATCCGCGGATATTTTTT-AATGAAAC---CC----------------------------------------A---------AATACSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
...........................................................................................................................................................................................................GTTCGCCAC-ACAAGATGAC.......................................................................................................................................................1913.003300000
...................................................................................................................................................................................................CTACGAGCGTTCGCCAC-ACAAGAT..........................................................................................................................................................2412.002100010
..............................................................................................................................................................................................TTCTTCTACGAGCGTTCGCC....................................................................................................................................................................2012.002100010
...............................................................................................................................................................................................TCTTCTACGAGCGTTCGCC....................................................................................................................................................................1912.002200000
................................................................................................................................................................................................CTTCTACGAGCGTTCGCCAC-ACAAGAT..........................................................................................................................................................2711.001000001
.........................................................................................................................................................................................................................................................ACGTTCAAAGCCAAAATAA..........................................................................................................1911.001000010
...............................................................................................................................................................................................................GCCAC-ACAAGATGGTGCGTC..................................................................................................................................................2011.001001000
................................................................................................................................................................................................CTTCTACGAGCGTTCGCCAC-ACAAG............................................................................................................................................................2511.001100000
...................................................................................................................................................................................................CTACGAGCGTTCGCCAC-ACAAGATGA........................................................................................................................................................2611.001000001
..................................................................................................................................................................................................TCTACGAGCGTTCGCCAC-A................................................................................................................................................................1911.001001000
.................................................................................................................................................................................................TTCTACGAGCGTTCGCCAC-ACAAGATG.........................................................................................................................................................2711.001000001
.............................................................................................................................................................................................TTTCTTCTACGAGCGTTCGCC....................................................................................................................................................................2111.001000001
............................................................................................................................................................................................CTTTCTTCTACGAGCGTTCGCC....................................................................................................................................................................2211.001000010
...........................................................................................................................................................................................TCTTTCTTCTACGAGCGTTCGCCAC-.................................................................................................................................................................2511.001000001
..............................................................................................................................................................................................................CGCCAC-ACAAGATGGTGCGTCAAC...............................................................................................................................................2411.001100000
....................................................................................................................................................................................................TACGAGCGTTCGCCAC-ACAAGATGGT.......................................................................................................................................................2611.001010000
.............................................................................................................................................................................................TTTCTTCTACGAGCGTTCGCCAC-ACAAG............................................................................................................................................................2811.001100000
................................................................................................................................................................................................CTTCTACGAGCGTTCGCC....................................................................................................................................................................1811.001100000
......................................................................................................................................................................................................CGAGCGTTCGCCAC-ACAAGATGAC.......................................................................................................................................................2411.001100000
.................................................................................................................................................................................................TTCTACGAGCGTTCGCCAC-.................................................................................................................................................................1911.001100000
.........................................................................................................................................................AAATTGACATTCGCTTGATT.........................................................................................................................................................................................................2011.001100000
droGri2
----------------------------------------------------------------------------------------------------------TGCAACCCTGCAG---CGTACGCCATAT---TGTGACAGCTGCTGTCAAACTGAAGTTTGTGTGCTACGCCTCTCTCTCGCTCTTTCTTCTACGAGCGTTCGCCAC-ACAAGATGGTGCGTCAATA------AAAT-TTATCCACGTTCAA-GCCGAAATAAAATCGCCAATTTCTATTAGCATCCGATTATATTTTTA--ACTAAAA---TC-ATAT--------------------------------TGCA---------ATTATSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
...................................................................................................................................................................................................CTACGAGCGTTCGCCAC-ACA..............................................................................................................................................................2015.00532
..............................................................................................................................................................................................TTCTTCTACGAGCGTTCGCCA...................................................................................................................................................................2112.00220
........................................................................................................................................................................................................AGCGTTCGCCAC-ACAAGATG.........................................................................................................................................................2012.00211
..................................................................................................................................................................................................TCTACGAGCGTTCGCCAC-ACAAGATG.........................................................................................................................................................2611.00101
....................................................................................................................................................................................................TACGAGCGTTCGCCAC-ACAAGATGAC.......................................................................................................................................................2611.00101
...............................................................................................................................................................................................TCTTCTACGAGCGTTCGCCAC-A................................................................................................................................................................2211.00101
..................................................................................................................................................................................................TCTACGAGCGTTCGCCAC-A................................................................................................................................................................1911.00110
................................................................................................................................................................................................CTTCTACGAGCGTTCGCCAC-A................................................................................................................................................................2111.00101
...................................................................................................................................................................................................CTACGAGCGTTCGCCAC-ACAAGATGAC.......................................................................................................................................................2711.00101
.........................................................................................................................................................................................................GCGTTCGCCAC-ACAAGATGAC.......................................................................................................................................................2111.00110
....................................................................................................................................................................................................TACGAGCGTTCGCCAC-ACAAG............................................................................................................................................................2111.00110
................................................................................................................................................................................................CTTCTACGAGCGTTCGCCA...................................................................................................................................................................1911.00110
................................................................................................................................................................................................CTTCTACGAGCGTTCGCCAC-ACAAGATG.........................................................................................................................................................2811.00110
..................................................................................................................................................................................................TCTACGAGCGTTCGCCAC-ACA..............................................................................................................................................................2111.00110
.....................................................................................................................................................................................................ACGAGCGTTCGCCAC-ACAAGAT..........................................................................................................................................................2211.00101
.....................................................................................................................................................................................................ACGAGCGTTCGCCAC-ACAAG............................................................................................................................................................2011.00110
................................................................................................................................................................................................CTTCTACGAGCGTTCGCCAC-ACA..............................................................................................................................................................2311.00101
..............................................................................................................................................................................................TTCTTCTACGAGCGTTCGCC....................................................................................................................................................................2011.00101

Generated: 05/18/2015 at 01:13 AM