ID:

dan_123

Coordinate:

scaffold_13340:14198982-14199044 -

Confidence:

Known Ortholog

Class:

Canonical miRNA

Genomic Locale:

intergenic

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-32.1 -32.1 -31.8

Flybase annnotation

intergenic

No Repeatable elements found

Sense Strand Reads

GGCAATGAGTGGAAAAGGATTTGGGGTCTTTTTCTGACTCTATTTTGTCGGCGAACATGGATCTAGTGCACGGTGTTTCATGATTAAGTTCGTGACTAGATTTCATGCTCGTCTATTAAGTTGGGTCAGCACACCAAAGAGTCGGATAGTGGAGAGTCAACTA

***********************************(((((.((((.((.(((((.((((((((((((.(((((................))))))))))).)))))).))))).)).)))).)))))************************************
Read size # Mismatch Hit Count Total Norm Total V105

male body
M044

female body

V106

head

V055

head

M058

embryo

V039

embryo

............................................................................................TGACTAGATTTCATGCTCGT................................................... 20 0 1 27015.00 27015 11841 2650 8383 2047 687 1407
............................................................................................TGACTAGATTTCATGCTCGTCT................................................. 22 0 1 26395.00 26395 2194 6750 3914 10547 1959 1031
............................................................................................TGACTAGATTTCATGCTCGTC.................................................. 21 0 1 10648.00 10648 1469 3261 1219 1562 2400 737
............................................................................................TGACTAGATTTCATGCTCGTCTA................................................ 23 0 1 5080.00 5080 294 1885 1767 713 116 305
.................................................GGCGAACATGGATCTAGTGCACG........................................................................................... 23 0 1 2985.00 2985 485 715 1520 122 118 25
..............................................................................................ACTAGATTTCATGCTCGTCT................................................. 20 0 1 1404.00 1404 612 731 4 11 45 1
..................................................GCGAACATGGATCTAGTGCACG........................................................................................... 22 0 1 1299.00 1299 410 341 397 80 46 25
............................................................................................TGACTAGATTTCATGCTCG.................................................... 19 0 1 1032.00 1032 331 447 71 168 11 4
............................................................................................TTACTAGATTTCATGCTCGTC.................................................. 21 1 1 644.00 644 7 2 2 1 630 2
............................................................................................TGACTAGATTTCATGCTCGTCC................................................. 22 1 1 624.00 624 2 10 7 18 579 8
............................................................................................TTACTAGATTTCATGCTCGTCT................................................. 22 1 1 576.00 576 15 7 18 11 521 4
....CTGAGTGGAAAAGGATGTGGA.......................................................................................................................................... 21 3 8 509.88 4079 3520 412 68 79 0 0
............................................................................................TGACTAGATTTCATGCTCGTCA................................................. 22 1 1 506.00 506 8 156 7 9 87 239
.............................................................................................GACTAGATTTCATGCTCGTCT................................................. 21 0 1 503.00 503 3 484 1 5 9 1
............................................................................................TGACTAGATTTCATGCTCGTCTT................................................ 23 1 1 447.00 447 36 151 140 111 3 6
....CTGAGTGGAAAAGGATGTGGAGT........................................................................................................................................ 23 3 2 403.00 806 689 106 3 8 0 0
.......AGTGGGAAAGGATGTGGGG......................................................................................................................................... 19 2 7 398.29 2788 320 2258 197 13 0 0
............................................................................................TGACTAGAGTTCATGCTCGTCT................................................. 22 1 1 329.00 329 2 274 0 53 0 0
............................................................................................TTACTAGATTTCATGCTCGT................................................... 20 1 1 268.00 268 37 4 34 3 187 3
......GAGTGGAAAAGGATGTGGAGT........................................................................................................................................ 21 2 1 262.00 262 217 29 9 6 1 0
.............................................................................................GACTAGATTTCATGCTCGTC.................................................. 20 0 1 243.00 243 0 237 5 0 1 0
.....TGAGTGGAAAAGGATGTGGA.......................................................................................................................................... 20 2 1 236.00 236 171 53 8 3 1 0
............................................................................................TGACTAGATTTCATTCTCGT................................................... 20 1 1 222.00 222 76 4 93 5 0 44
.............................................................................................GACTAGATTTCATGCTCGT................................................... 19 0 1 192.00 192 5 181 4 1 1 0
............................................................................................TGACTAGATTTCATGCTCGC................................................... 20 1 1 191.00 191 9 2 12 22 141 5
.......AGTGGAAAAGGATGTGGAGT........................................................................................................................................ 20 2 2 175.00 350 183 140 11 14 1 1
............................................................................................TGACTAGATTTCATGATCGT................................................... 20 1 1 170.00 170 98 1 55 10 0 6
.....TAAGTGGAAAAGGATGTGGAGT........................................................................................................................................ 22 3 2 169.50 339 232 81 6 19 1 0
..............................................................................................ACTAGATTTCATGCTCGTCTA................................................ 21 0 1 166.00 166 51 111 1 1 1 1
............................................................................................TTACTAGATTTCATGCTCGTCC................................................. 22 2 1 162.00 162 0 0 0 0 162 0
.................................................GGCGAACATGGATCTAGTGCAC............................................................................................ 22 0 1 161.00 161 10 62 40 4 44 1
........GTGGAAAAGGATGTGGAGT........................................................................................................................................ 19 2 7 149.29 1045 842 133 47 22 1 0
.............................................................................................GACTAGATTTCATGCTCGTCTA................................................ 22 0 1 138.00 138 0 138 0 0 0 0
....CTGAGTGGAAAAGGATGTG............................................................................................................................................ 19 2 4 130.25 521 456 39 20 6 0 0
............................................................................................TGACTAGAGTTCATGCTCGT................................................... 20 1 1 130.00 130 4 110 1 11 0 4
.................................................GGCGAACATGGATCTAGTGCA............................................................................................. 21 0 1 129.00 129 18 34 57 5 12 3
............................................................................................TGACTAGAGTTCATGCTCGTC.................................................. 21 1 1 124.00 124 1 118 0 5 0 0
............................................................................................TGACTAGATTTCATTCTCGTCT................................................. 22 1 1 108.00 108 13 7 23 43 2 20
.....TGAGTGGAAAAGGATGTGGAGT........................................................................................................................................ 22 2 1 106.00 106 74 23 5 3 1 0
............................................................................................TGATTAGATTTCATGCTCGTC.................................................. 21 1 1 104.00 104 0 2 1 3 98 0
............................................................................................TGACTAGATTTCATGATCGTCT................................................. 22 1 1 103.00 103 9 1 28 63 0 2
............................................................................................TGATTAGATTTCATGCTCGTCT................................................. 22 1 1 101.00 101 2 1 3 9 86 0
............................................................................................TGACTAGATTTCATGCTCGTT.................................................. 21 1 1 100.00 100 43 20 13 20 3 1
..................................................GCGAACATGGATCTAGTGCAC............................................................................................ 21 0 1 98.00 98 9 33 6 3 46 1
............................................................................................TGACTAGATTTCATGCTCGCCT................................................. 22 1 1 97.00 97 1 4 2 79 8 3
............................................................................................TGACTAGACTTCATGCTCGTCT................................................. 22 1 1 92.00 92 4 50 4 26 5 3
............................................................................................TGACTAGATTTCATGCTCTTCT................................................. 22 1 1 92.00 92 3 5 9 56 2 17
............................................................................................GGACTAGATTTCATGCTCGTCT................................................. 22 1 1 91.00 91 2 26 0 57 3 3
............................................................................................TGACTAGAATTCATGCTCGTCT................................................. 22 1 1 89.00 89 1 81 0 7 0 0
............................................................................................TGACTAGATTTCATGCTAGT................................................... 20 1 1 84.00 84 37 0 40 4 0 3
............................................................................................TGACTAGATTTAATGCTCGT................................................... 20 1 1 83.00 83 57 0 20 3 2 1
....CTGAGTGGAAAAGGATGTGG........................................................................................................................................... 20 2 3 80.33 241 201 33 6 1 0 0
............................................................................................TGACTAGATTTCATGCTCGTCTAT............................................... 24 0 1 80.00 80 3 41 6 25 4 1
.......AGTGGGAAAGGATGTGGG.......................................................................................................................................... 18 2 20 79.35 1587 740 847 0 0 0 0
............................................................................................TGACTATATTTCATGCTCGT................................................... 20 1 1 75.00 75 34 0 32 1 1 7
............................................................................................TGACTAGATTTCATGCTCGTAT................................................. 22 1 1 71.00 71 27 5 24 13 0 2
............................................................................................TGACTAGAATTCATGCTCGT................................................... 20 1 1 71.00 71 8 62 0 0 0 1
............................................................................................TGACTAGATTTCATGCTCGTTT................................................. 22 1 1 71.00 71 28 4 12 22 2 3
............................................................................................TGACTAGATTTCATGCTCCTCT................................................. 22 1 1 68.00 68 5 8 3 41 2 9
............................................................................................TGACTAGAGTTCATGCTCGTCTA................................................ 23 1 1 67.00 67 0 63 0 3 0 1
............................................................................................TGGCTAGATTTCATGCTCGTCT................................................. 22 1 1 64.00 64 2 6 14 38 3 1
............................................................................................TGGCTAGATTTCATGCTCGT................................................... 20 1 1 63.00 63 4 2 44 9 1 3
............................................................................................TGACTAGACTTCATGCTCGT................................................... 20 1 1 62.00 62 9 30 15 4 4 0
............................................................................................AGACTAGATTTCATGCTCGTCT................................................. 22 1 1 62.00 62 0 7 1 51 2 1
............................................................................................TGATTAGATTTCATGCTCGT................................................... 20 1 1 59.00 59 7 0 7 4 38 3
............................................................................................TGACTAGATTTCATGCTCGTCTTT............................................... 24 1 1 57.00 57 4 32 3 18 0 0
............................................................................................TGACTAGAATTCATGCTCGTC.................................................. 21 1 1 55.00 55 0 54 0 1 0 0
..............................................................................................ACTAGATTTCATGCTCGTC.................................................. 19 0 1 54.00 54 12 35 1 1 5 0
............................................................................................TGACTAGATTTCGTGCTCGT................................................... 20 1 1 52.00 52 31 3 9 6 0 3
............................................................................................TGACTAGATTTCATGCTAGTCT................................................. 22 1 1 52.00 52 7 0 24 21 0 0
............................................................................................TGACTAGATTTCTTGCTCGTCT................................................. 22 1 1 51.00 51 4 1 0 45 0 1
............................................................................................TGACTAGATTTCATGCTCTT................................................... 20 1 1 50.00 50 6 2 7 14 0 21
............................................................................................TGACTAGATTTCCTGCTCGTCT................................................. 22 1 1 50.00 50 2 0 1 35 8 4
..................................................GCGAACATGGATCTAGTGCA............................................................................................. 20 0 1 49.00 49 27 15 4 2 1 0
............................................................................................TAACTAGATTTCATGCTCGT................................................... 20 1 1 49.00 49 35 0 3 8 1 2
............................................................................................TGACTAGATTTCATCCTCGTCT................................................. 22 1 1 49.00 49 0 2 4 35 2 6
............................................................................................TGACTAGCTTTCATGCTCGTCT................................................. 22 1 1 48.00 48 2 1 1 37 3 4
............................................................................................TGACTATATTTCATGCTCGTCT................................................. 22 1 1 48.00 48 9 1 22 7 7 2
...............................................................................................CTAGATTTCATGCTCGTCT................................................. 19 0 1 48.00 48 4 43 0 1 0 0
............................................................................................TGAATAGATTTCATGCTCGTCT................................................. 22 1 1 48.00 48 6 0 6 36 0 0
............................................................................................CGACTAGATTTCATGCTCGTCT................................................. 22 1 1 48.00 48 3 3 9 29 2 2
............................................................................................TGACTAGATTTCATGCTCGTA.................................................. 21 1 1 47.00 47 25 3 11 4 0 4
.................................................GGCGAACATGGATCTAGTGC.............................................................................................. 20 0 1 46.00 46 1 11 26 0 6 2
............................................................................................TGAATAGATTTCATGCTCGT................................................... 20 1 1 45.00 45 28 0 12 4 0 1
............................................................................................TGACTAGACTTCATGCTCGTC.................................................. 21 1 1 45.00 45 0 38 1 2 4 0
............................................................................................CGACTAGATTTCATGCTCGT................................................... 20 1 1 45.00 45 13 2 18 8 1 3
............................................................................................TGACTAGATTTAATGCTCGTCT................................................. 22 1 1 45.00 45 12 0 8 18 4 3
............................................................................................TGACTAGATTTCATGCTCGTCTAA............................................... 24 1 1 45.00 45 0 12 5 6 11 11
............................................................................................TGACTAGATTTCATGCTCGTCG................................................. 22 1 1 45.00 45 1 19 3 21 0 1
............................................................................................TGACTAGATTTCATGCTCGGCT................................................. 22 1 1 44.00 44 0 1 2 35 4 2
............................................................................................TGACTAGATTTCCTGCTCGT................................................... 20 1 1 44.00 44 26 0 1 8 4 5
............................................................................................TTACTAGATTTCATGCTCGTCTA................................................ 23 1 1 44.00 44 2 2 4 0 35 1
............................................................................................TGACTAGGTTTCATGCTCGTCT................................................. 22 1 1 43.00 43 4 1 2 34 0 2
............................................................................................TGACTAGATTTCATTCTCGTC.................................................. 21 1 1 42.00 42 6 3 8 5 0 20
.................................................GTCGAACATGGATCTAGTGCACG........................................................................................... 23 1 1 42.00 42 2 0 6 0 34 0
..............................................................................................ACTAGATTTCATGCTCGTCTT................................................ 21 1 1 42.00 42 14 26 2 0 0 0
............................................................................................TGACTAGATTTCATGCTCGAC.................................................. 21 1 1 42.00 42 0 0 0 1 38 3
............................................................................................TAACTAGATTTCATGCTCGTCT................................................. 22 1 1 42.00 42 6 2 3 14 16 1
...................................................CGAACATGGATCTAGTGCACG........................................................................................... 21 0 1 41.00 41 1 39 0 1 0 0
............................................................................................TGACTAGATTTGATGCTCGT................................................... 20 1 1 41.00 41 37 0 3 1 0 0
............................................................................................TGACTAGATGTCATGCTCGTCT................................................. 22 1 1 40.00 40 1 0 1 35 1 2
.......AGTGGAAAAGGATGTGGGGT........................................................................................................................................ 20 1 1 40.00 40 8 20 11 1 0 0
............................................................................................TGACTAGATTTCGTGCTCGTCT................................................. 22 1 1 40.00 40 7 2 5 26 0 0
............................................................................................TGACTAGATTCCATGCTCGT................................................... 20 1 1 40.00 40 19 1 12 4 0 4
............................................................................................TGACTAGATTTTATGCTCGT................................................... 20 1 1 40.00 40 30 0 6 1 2 1
............................................................................................TGACTAGATTTCATACTCGT................................................... 20 1 1 40.00 40 12 0 13 8 1 6
............................................................................................TGCCTAGATTTCATGCTCGTCT................................................. 22 1 1 39.00 39 1 1 2 17 18 0
............................................................................................TGACTAGATTTCATCCTCGT................................................... 20 1 1 39.00 39 8 2 11 10 0 8
..............................................................................................ACTAGATTGCATGCTCGTCT................................................. 20 1 1 39.00 39 0 39 0 0 0 0
.................................................GGCGAACATGGATCTAGTGCACGT.......................................................................................... 24 1 1 38.00 38 3 3 27 2 2 1
............................................................................................TGACTAGATTCCATGCTCGTCT................................................. 22 1 1 38.00 38 0 0 6 30 1 1
............................................................................................TTACTAGATTTCATGCTCGC................................................... 20 2 1 38.00 38 0 0 0 0 37 1
.............................................................................................GACTAGATTTCATGCTCG.................................................... 18 0 1 38.00 38 0 38 0 0 0 0
.....TGAGTGGAAAAGGATGTGGAGTT....................................................................................................................................... 23 3 1 36.00 36 27 4 5 0 0 0
............................................................................................TCACTAGATTTCATGCTCGT................................................... 20 1 1 36.00 36 19 0 2 2 6 7
............................................................................................TGACTAGATTTCATTCTCGTCTA................................................ 23 1 1 35.00 35 2 0 21 4 0 8
............................................................................................GGACTAGATTTCATGCTCGT................................................... 20 1 1 34.00 34 6 13 3 9 1 2
............................................................................................TGACTAGATTACATGCTCGT................................................... 20 1 1 33.00 33 29 0 0 4 0 0
............................................................................................TGACTAGATTGCATGCTCGT................................................... 20 1 1 32.00 32 19 0 1 11 0 1
............................................................................................TGACTAGATTTCATGCTCGTCTC................................................ 23 1 1 31.00 31 0 11 3 14 1 2
............................................................................................TGACTAGCTTTCATGCTCGT................................................... 20 1 1 31.00 31 12 0 7 6 2 4
............................................................................................TGACTAGATTTCATGTTCGTCT................................................. 22 1 1 31.00 31 5 2 2 20 2 0
............................................................................................TGACTAGATTGCATGCTCGTCT................................................. 22 1 1 30.00 30 4 0 0 26 0 0
............................................................................................TGACTAGATTTCATACTCGTCT................................................. 22 1 1 30.00 30 1 2 4 14 4 5
............................................................................................TGACTAGATTTCATGCGCGTCT................................................. 22 1 1 29.00 29 0 0 0 28 1 0
............................................................................................TCACTAGATTTCATGCTCGTCT................................................. 22 1 1 29.00 29 5 3 1 7 11 2
............................................................................................TGACTAGGTTTCATGCTCGT................................................... 20 1 1 29.00 29 9 0 9 9 0 2
............................................................................................TGACTAGATCTCATGCTCGTCT................................................. 22 1 1 28.00 28 1 0 2 25 0 0
............................................................................................TGACTAGATTTCATGTTCGT................................................... 20 1 1 28.00 28 21 0 1 4 2 0
............................................................................................CGACTAGATTTCATGCTCGTC.................................................. 21 1 1 27.00 27 2 6 4 8 4 3
............................................................................................TGACTGGATTTCATGCTCGTCT................................................. 22 1 1 27.00 27 0 1 9 15 2 0
............................................................................................TGACGAGATTTCATGCTCGTCT................................................. 22 1 1 27.00 27 0 0 0 26 0 1
..................................................GCGAACATGGATCTAGTGC.............................................................................................. 19 0 1 26.00 26 0 7 15 1 1 2
............................................................................................TGACTAGATTTCATGCTTGT................................................... 20 1 1 26.00 26 6 1 14 0 0 5
............................................................................................TGACCAGATTTCATGCTCGT................................................... 20 1 1 26.00 26 9 3 9 4 1 0
............................................................................................TGACTAGATTTCATGCTCGTGT................................................. 22 1 1 26.00 26 10 0 6 10 0 0
......GAGTGGAAAAGGATGTGGAGTT....................................................................................................................................... 22 3 3 25.67 77 53 13 7 3 1 0
............................................................................................TGACTAGTTTTCATGCTCGTCT................................................. 22 1 1 25.00 25 0 1 2 22 0 0
............................................................................................TGACTAGATTTCATGCCCGTCT................................................. 22 1 1 25.00 25 1 3 9 12 0 0
............................................................................................TGACTAGATTTCATGCTCCT................................................... 20 1 1 25.00 25 6 1 3 3 3 9
........GTGGAAAAGGATGTGGGGT........................................................................................................................................ 19 1 1 25.00 25 13 9 2 1 0 0
.....TGAGTGGAAAAGGATGTGG........................................................................................................................................... 19 1 1 25.00 25 17 5 3 0 0 0
............................................................................................TGACTAGATTTCATGCTCT.................................................... 19 1 1 24.00 24 4 6 6 6 2 0
............................................................................................TGCCTAGATTTCATGCTCGTC.................................................. 21 1 1 24.00 24 1 0 0 1 22 0
............................................................................................TGACTAGATTTCATGATCGTC.................................................. 21 1 1 24.00 24 8 0 8 7 0 1
............................................................................................TGACTAGATTTCTTGCTCGT................................................... 20 1 1 24.00 24 15 0 0 8 0 1
............................................................................................TGACTAGATTTCATCCTCGTC.................................................. 21 1 1 24.00 24 0 0 2 10 7 5
............................................................................................TGACTAGATTTCACGCTCGTCT................................................. 22 1 1 24.00 24 3 2 4 13 1 1
............................................................................................TTACTAGATTTCATGCTCGTCA................................................. 22 2 1 23.00 23 0 0 0 0 21 2
............................................................................................TGACTAGATTTCATGATCGTCTA................................................ 23 1 1 23.00 23 4 0 13 5 0 1
........................................................................GTGTTTCATGATTAAGTTCG....................................................................... 20 0 1 23.00 23 4 2 7 0 6 4
............................................................................................TGACTAGATTTCATGCTCGCC.................................................. 21 1 1 22.00 22 2 2 2 11 1 4
............................................................................................TGACTAGATTTCATGCTCGTCTG................................................ 23 1 1 22.00 22 1 12 5 2 0 2
............................................................................................TGACTCGATTTCATGCTCGTCT................................................. 22 1 1 22.00 22 0 0 1 20 0 1
.................................................GGCGAACAGGGATCTAGTGCACG........................................................................................... 23 1 1 22.00 22 1 21 0 0 0 0
............................................................................................TGACCAGATTTCATGCTCGTCT................................................. 22 1 1 22.00 22 2 1 3 15 1 0
...GCTGAGTGGAAAAGGATTTGGA.......................................................................................................................................... 22 3 1 22.00 22 21 1 0 0 0 0
............................................................................................TTATTAGATTTCATGCTCGTC.................................................. 21 2 1 22.00 22 0 0 0 0 22 0
............................................................................................TGACTAGAATTCATGCTCGTCTA................................................ 23 1 1 22.00 22 0 22 0 0 0 0
............................................................................................TGATTAGATTTCATGCTCGTCC................................................. 22 2 1 22.00 22 0 0 0 0 22 0
................................................CGGCGAACATGGATCTAGTGCACG........................................................................................... 24 0 1 21.00 21 0 17 2 2 0 0
....CTGAGTGGAAAAGGATGTGGAG......................................................................................................................................... 22 3 4 21.00 84 71 9 2 2 0 0
............................................................................................TGACTAGATTTCATGCTCGTATA................................................ 23 1 1 21.00 21 3 0 18 0 0 0
............................................................................................TGAGTAGATTTCATGCTCGTCT................................................. 22 1 1 20.00 20 0 0 0 16 2 2
............................................................................................TGACTAGATCTCATGCTCGT................................................... 20 1 1 20.00 20 6 2 7 2 1 2
.................................................GGCGAACATGGATCTAGTGCACT........................................................................................... 23 1 1 20.00 20 1 0 17 1 0 1
............................................................................................TGACTAGATTTCATGCTTGTCT................................................. 22 1 1 20.00 20 2 2 7 8 1 0
..................................................GCGAACATGGATCTAGTGCACGT.......................................................................................... 23 1 1 20.00 20 5 11 2 0 2 0
............................................................................................TGACTAGATTTTATGCTCGTCT................................................. 22 1 1 20.00 20 5 1 3 10 0 1
............................................................................................TGACTAGATTTCATGCTCTTC.................................................. 21 1 1 20.00 20 2 0 1 5 3 9
..............................................................................................ACTAGATTTCATGCTCGT................................................... 18 0 1 19.00 19 3 16 0 0 0 0
............................................................................................TGACTAGATTTCATGCTCGTG.................................................. 21 1 1 19.00 19 13 2 1 1 0 2
............................................................................................TGACTAGATTTCACGCTCGT................................................... 20 1 1 19.00 19 14 1 2 1 0 1
............................................................................................TGACTACATTTCATGCTCGT................................................... 20 1 1 19.00 19 12 0 5 1 0 1
............................................................................................TGACTAGATTTCCTGCTCGTC.................................................. 21 1 1 19.00 19 3 0 0 2 10 4
.................................................GGAGAACATGGATCTAGTGCACG........................................................................................... 23 1 1 19.00 19 1 0 14 0 4 0
............................................................................................TGACTGGATTTCATGCTCGT................................................... 20 1 1 18.00 18 2 1 9 4 0 2
............................................................................................TGACTAGATTTCAAGCTCGT................................................... 20 1 1 18.00 18 18 0 0 0 0 0
............................................................................................AGACTAGATTTCATGCTCGTC.................................................. 21 1 1 18.00 18 0 5 0 8 4 1
.....TAAGTGGAAAAGGATGTGGGGT........................................................................................................................................ 22 2 1 18.00 18 9 5 4 0 0 0
............................................................................................TGACTAGATTTCATGCCCGT................................................... 20 1 1 17.00 17 3 2 11 1 0 0
............................................................................................TGACTAGACTTCATGCTCGTCTA................................................ 23 1 1 17.00 17 0 11 2 4 0 0
.......AGTGGAAAAGGATGTGGGGTTG...................................................................................................................................... 22 3 1 17.00 17 1 12 3 0 0 1
.....TGAGTGGAAAAGGATGTG............................................................................................................................................ 18 1 1 17.00 17 8 5 3 1 0 0
............................................................................................TGACTAGATTTCATGCTCGTCTAC............................................... 24 1 1 17.00 17 0 13 0 2 1 1
............................................................................................TGACTAGATTTCATGCTCAT................................................... 20 1 1 17.00 17 6 0 4 3 1 3
............................................................................................AGACTAGATTTCATGCTCGT................................................... 20 1 1 17.00 17 1 1 1 9 1 4
.............................................................................................GACTAGATGTCATGCTCGTCT................................................. 21 1 1 17.00 17 0 17 0 0 0 0
......GAGTGGAAAAGGATGTGG........................................................................................................................................... 18 1 2 17.00 34 25 5 4 0 0 0
............................................................................................TAACTAGATTTCATGCTCGTC.................................................. 21 1 1 17.00 17 1 0 1 3 12 0
............................................................................................TGCCTAGATTTCATGCTCGTCC................................................. 22 2 1 16.00 16 0 0 0 0 16 0
............................................................................................TGACTAGATTTCATGCTAGTC.................................................. 21 1 1 16.00 16 6 1 6 1 0 2
....CTGAGTGGAAAAGGATGTGGG.......................................................................................................................................... 21 2 1 16.00 16 16 0 0 0 0 0
............................................................................................GGACTAGATTTCATGCTCGTC.................................................. 21 1 1 16.00 16 0 9 0 4 2 1
............................................................................................TGACTACATTTCATGCTCGTCT................................................. 22 1 1 16.00 16 2 0 2 11 0 1
............................................................................................TGGCTAGATTTCATGCTCGTC.................................................. 21 1 1 16.00 16 0 2 5 3 1 5
............................................................................................TGACTAGATTTAATGCTCGTC.................................................. 21 1 1 16.00 16 5 0 4 4 2 1
................................................................................................TAGATTTCATGCTCGTCT................................................. 18 0 1 16.00 16 3 9 1 1 2 0
.......AGTGGGAAAGGATTTGGGGATT...................................................................................................................................... 22 3 1 16.00 16 2 11 3 0 0 0
............................................................................................TGACTAGATTTCATGCTCGA................................................... 20 1 1 15.00 15 2 2 5 2 2 2
............................................................................................TGACTATATTTCATGCTCGTC.................................................. 21 1 1 15.00 15 5 1 2 0 6 1
............................................................................................TCACTAGATTTCATGCTCGTC.................................................. 21 1 1 15.00 15 2 0 1 2 10 0
............................................................................................TGACTAGATTTCATGCTCATCT................................................. 22 1 1 15.00 15 3 2 1 7 0 2
............................................................................................TGCCTAGATTTCATGCTCGT................................................... 20 1 1 15.00 15 4 0 2 4 3 2
.................................................GGCTAACATGGATCTAGTGCACG........................................................................................... 23 1 1 15.00 15 2 2 7 0 4 0
............................................................................................TTATTAGATTTCATGCTCGTCT................................................. 22 2 1 15.00 15 0 0 0 0 15 0
.......AGTGGAAAAGGATGTGGGGTT....................................................................................................................................... 21 2 1 15.00 15 4 4 7 0 0 0
............................................................................................TGACTAGATTTCATGCTC..................................................... 18 0 1 15.00 15 0 4 1 7 2 1
............................................................................................TGACTAGATTTCATACTCGTC.................................................. 21 1 1 14.00 14 3 2 1 1 2 5
...GATGAGTGGAAAAGGATGTGGAGT........................................................................................................................................ 24 3 1 14.00 14 14 0 0 0 0 0
............................................................................................TGACTAGATTTCATGCTCGG................................................... 20 1 1 14.00 14 0 1 2 5 1 5
...............................................................................................CTAGATTTCATGCTCGTCTA................................................ 20 0 1 13.00 13 2 11 0 0 0 0
............................................................................................TGAGTAGATTTCATGCTCGT................................................... 20 1 1 13.00 13 5 0 3 4 0 1
............................................................................................TGACTAGATTTCTTGCTCGTC.................................................. 21 1 1 13.00 13 2 0 0 9 0 2
............................................................................................TGACTAGATTTCATGCTCTTCTA................................................ 23 1 1 13.00 13 1 0 4 2 0 6
...GATGAGTGGAAAAGGATGTGGA.......................................................................................................................................... 22 3 5 12.20 61 58 0 2 1 0 0
....................................................GAACATGGATCTAGTGCACG........................................................................................... 20 0 1 12.00 12 4 7 0 1 0 0
............................................................................................TGACTAGATCTCATGCTCGTC.................................................. 21 1 1 12.00 12 0 0 2 5 4 1
............................................................................................TGACTAGATTTCAGGCTCGTCT................................................. 22 1 1 12.00 12 0 0 1 11 0 0
............................................................................................TGACTAGATTTCATGCGCGTC.................................................. 21 1 1 12.00 12 0 0 0 10 1 1
............................................................................................TGACTAGATTTTATGCTCGTC.................................................. 21 1 1 12.00 12 7 1 1 1 2 0
............................................................................................TGACTAGCTTTCATGCTCGTC.................................................. 21 1 1 12.00 12 0 0 0 5 5 2
.................................................GGCGAACAAGGATCTAGTGCACG........................................................................................... 23 1 1 12.00 12 1 11 0 0 0 0
.............................................................................................GACTAGATTTCATGCTCGTCTT................................................ 22 1 1 11.00 11 0 11 0 0 0 0
............................................................................................GGACTAGATTTCATGCTCGTCTA................................................ 23 1 1 11.00 11 1 2 0 7 0 1
..............................................................................................ACTAGATTACATGCTCGTCT................................................. 20 1 1 11.00 11 0 11 0 0 0 0
............................................................................................TGACTAGATTTCATGCTGGTCT................................................. 22 1 1 11.00 11 1 0 2 8 0 0
............................................................................................TGACTAGATTTCAGGCTCGT................................................... 20 1 1 11.00 11 10 0 1 0 0 0
............................................................................................TGACTAGATTTCATGCTCGACT................................................. 22 1 1 11.00 11 1 1 1 6 0 2
............................................................................................TGACTAGATTCCATGCTCGTC.................................................. 21 1 1 11.00 11 1 0 3 4 0 3
............................................................................................TGACTAGTTTTCATGCTCGT................................................... 20 1 1 11.00 11 1 1 0 8 0 1
............................................................................................TGACTAGATTTCATGCTAGTCTA................................................ 23 1 1 11.00 11 1 0 10 0 0 0
............................................................................................TGAATAGATTTCATGCTCGTC.................................................. 21 1 1 11.00 11 3 1 1 5 0 1
............................................................................................TGACTAGATGTCTTGCTCGTCT................................................. 22 2 1 11.00 11 0 0 0 11 0 0
............................................................................................TGACTAGATTTCATGCTCATC.................................................. 21 1 1 11.00 11 0 0 1 4 3 3
............................................................................................CGACTAGATTTCATGCTCGTCTA................................................ 23 1 1 10.00 10 0 3 4 2 0 1
..................................................GCGAACATTGATCTAGTGCACG........................................................................................... 22 1 1 10.00 10 2 5 3 0 0 0
............................................................................................TGGCTAGATTTCATGCTCGTCTA................................................ 23 1 1 10.00 10 0 1 7 2 0 0
.................................................GGCGAACATTGATCTAGTGCACG........................................................................................... 23 1 1 10.00 10 2 0 8 0 0 0
............................................................................................TGACTAGATTTCATGCTGGT................................................... 20 1 1 10.00 10 3 0 6 1 0 0
...........................................................................................CTGACTAGATTTCATGCTCGTC.................................................. 22 1 1 10.00 10 0 4 0 0 4 2
............................................................................................TGACTAGATTACATGCTCGTC.................................................. 21 1 1 10.00 10 6 0 0 3 1 0
...........................................................................................CTGACTAGATTTCATGCTCGTCT................................................. 23 1 1 10.00 10 0 0 0 6 4 0
............................................................................................TGACTAGATTTCATGCTCCTC.................................................. 21 1 1 10.00 10 0 1 0 4 1 4
............................................................................................TGACTAAATTTCATGCTCGTCT................................................. 22 1 1 10.00 10 2 0 1 7 0 0
.............................................................................................GACTAGATATCATGCTCGTCT................................................. 21 1 1 10.00 10 0 10 0 0 0 0
............................................................................................TGTCTAGATTTCATGCTCGTCT................................................. 22 1 1 10.00 10 0 0 2 8 0 0
............................................................................................TGACTGGATTTCATGCTCGTC.................................................. 21 1 1 10.00 10 1 0 0 3 5 1
............................................................................................TGACTAGATTTCATGCTCGGC.................................................. 21 1 1 10.00 10 0 1 0 6 2 1
....ATGAGTGGAAAAGGATGTGGA.......................................................................................................................................... 21 2 1 10.00 10 8 0 0 2 0 0
...........................................................................................GTGACTAGATTTCATGCTCGTC.................................................. 22 0 1 10.00 10 0 3 5 0 2 0
....CTGAGTGGAAAAGGATTTGGA.......................................................................................................................................... 21 2 1 10.00 10 9 1 0 0 0 0
.............................................................................................GACTAGATTTCATGCTCGTCA................................................. 21 1 1 10.00 10 0 10 0 0 0 0
............................................................................................TGACTAAATTTCATGCTCGT................................................... 20 1 1 10.00 10 7 1 0 2 0 0
..............................................................................................ACTAGATTTCATGCTCGTCTAT............................................... 22 0 1 10.00 10 5 5 0 0 0 0
............................................................................................TGACTAGATTTCAAGCTCGTCT................................................. 22 1 1 10.00 10 3 0 1 5 0 1
..............................................................................................ACTAGATTTCATGCTCGTCC................................................. 20 1 1 10.00 10 0 0 0 0 10 0
............................................................................................TGACTAGATTTGATGCTCGTC.................................................. 21 1 1 10.00 10 7 0 1 1 1 0
............................................................................................TGACTAGATTTGATGCTCGTCT................................................. 22 1 1 9.00 9 5 0 0 4 0 0
.....TGAGTGGAAAAGGATGTGGAG......................................................................................................................................... 21 2 1 9.00 9 7 1 0 1 0 0
..................................................GCTAACATGGATCTAGTGCACG........................................................................................... 22 1 1 9.00 9 2 1 6 0 0 0
............................................................................................TGACTAGATTTCGTGCTCGTC.................................................. 21 1 1 9.00 9 2 0 1 4 1 1
............................................................................................TGACTAGATTTCACGCTCGTC.................................................. 21 1 1 9.00 9 1 4 0 2 1 1
..............................................................................................ACTAGATTTCATGCTCGTCTTT............................................... 22 1 1 9.00 9 1 8 0 0 0 0
........GTGGGAAAGGATTTGGGG......................................................................................................................................... 18 1 1 9.00 9 2 6 1 0 0 0
............................................................................................TGATTAGATTTCATGCTCGTCTA................................................ 23 1 1 9.00 9 1 0 2 0 6 0
............................................................................................TGACCAGATTTCATGCTCGTC.................................................. 21 1 1 9.00 9 0 1 2 3 3 0
..................................................GCGAACATGGATCTAGTGCACT........................................................................................... 22 1 1 9.00 9 0 1 7 1 0 0
............................................................................................GGACTAGATGTCATGCTCGTCT................................................. 22 2 1 9.00 9 0 0 0 9 0 0
............................................................................................TGACTAGATTTCATGCTTGTC.................................................. 21 1 1 9.00 9 0 0 0 6 3 0
............................................................................................TGACGAGATTTCATGCTCGTC.................................................. 21 1 1 9.00 9 0 0 1 8 0 0
............................................................................................TGACTAGATTTCATGCTCGCCTA................................................ 23 1 1 9.00 9 0 0 1 5 0 3
.............................................................................................GACTAGATGTCATGCTCGTC.................................................. 20 1 1 9.00 9 0 9 0 0 0 0
.......AGTGGAAAAGGATGTGGG.......................................................................................................................................... 18 1 3 8.67 26 8 11 6 1 0 0
.................................................GTCGAACATGGATCTAGTGCAC............................................................................................ 22 1 1 8.00 8 0 0 0 0 8 0
............................................................................................TGACTAGATTTCATGCTCGTCAA................................................ 23 1 1 8.00 8 0 7 0 0 1 0
............................................................................................TGACTAGATTTCATGGTCGT................................................... 20 1 1 8.00 8 4 0 3 0 0 1
............................................................................................TGACAAGATTTCATGCTCGTCT................................................. 22 1 1 8.00 8 0 1 0 6 1 0
............................................................................................TTATTAGATTTCATGCTCGT................................................... 20 2 1 8.00 8 0 0 0 1 7 0
............................................................................................TGACTAGATTGCATGCTCGTC.................................................. 21 1 1 8.00 8 2 0 0 3 0 3
.................................................GGCGAACATGGATCTAGTGCCCG........................................................................................... 23 1 1 8.00 8 3 0 2 2 0 1
........GTGGAAAAGGATGTGGGGTT....................................................................................................................................... 20 2 1 8.00 8 2 5 0 0 1 0
............................................................................................TTCCTAGATTTCATGCTCGTC.................................................. 21 2 1 8.00 8 0 0 0 0 8 0
............................................................................................TGACTAGATTTCATTCTCG.................................................... 19 1 1 8.00 8 3 0 0 4 0 1
..................................................GCGAACATGGATCTAGTG............................................................................................... 18 0 1 8.00 8 0 3 5 0 0 0
............................................................................................TGACTAGATTTCATGCCCGTC.................................................. 21 1 1 8.00 8 0 2 2 2 1 1
............................................................................................TGACTAGATTGCTTGCTCGTCT................................................. 22 2 1 8.00 8 0 0 0 8 0 0
..................................................GCGAACATGGATCTAGTGCACGG.......................................................................................... 23 0 1 8.00 8 2 3 2 1 0 0
............................................................................................TGACTAGATTTCATGCTCGTCTAG............................................... 24 1 1 8.00 8 0 3 1 0 2 2
............................................................................................TGACTAGATTTCATTCTCTTCT................................................. 22 2 1 8.00 8 0 0 0 6 0 2
............................................................................................TGACTAGATGTCATGCTCGT................................................... 20 1 1 8.00 8 0 0 0 7 0 1
...........................................................................................GTGACTAGATTTCATGCTCGTCT................................................. 23 0 1 8.00 8 0 7 0 0 0 1
.........TGGAAAAGGATGTGGAGT........................................................................................................................................ 18 2 20 7.65 153 0 119 8 23 1 2
............................................................................................TGACTAGATTTCATGTTCGTC.................................................. 21 1 1 7.00 7 1 0 0 1 5 0
............................................................................................TGACTATATTTCATGCTCGTCTA................................................ 23 1 1 7.00 7 0 1 5 0 0 1
............................................................................................TGACTAGATTTCATGATCG.................................................... 19 1 1 7.00 7 4 0 1 2 0 0
............................................................................................TGACTAGATTTCATGCTCGTCCA................................................ 23 1 1 7.00 7 1 3 3 0 0 0
..................................................GCGAACATGGATCTAGTGCATG........................................................................................... 22 1 1 7.00 7 4 0 3 0 0 0
............................................................................................TGACTTGATTTCATGCTCGTCT................................................. 22 1 1 7.00 7 2 1 0 2 2 0
............................................................................................TGACTAGATGTCATGCTCGTC.................................................. 21 1 1 7.00 7 0 0 0 6 0 1
.................................................GGCGAACATGGATCTAGTGCTCG........................................................................................... 23 1 1 7.00 7 0 0 7 0 0 0

Anti-sense strand reads

CCGTTACTCACCTTTTCCTAAACCCCAGAAAAAGACTGAGATAAAACAGCCGCTTGTACCTAGATCACGTGCCACAAAGTACTAATTCAAGCACTGATCTAAAGTACGAGCAGATAATTCAACCCAGTCGTGTGGTTTCTCAGCCTATCACCTCTCAGTTGAT

************************************(((((.((((.((.(((((.((((((((((((.(((((................))))))))))).)))))).))))).)).)))).)))))***********************************
Read size # Mismatch Hit Count Total Norm Total V055

head

M058

embryo

..............................................................................................TGCTCTACAGTACGAGAAGA................................................. 20 3 14 0.07 1 1 0
.........................CAGAAAACGACTGTCATAAA...................................................................................................................... 20 3 15 0.07 1 1 0
.........................CAGAAAATGACGGAGATATA...................................................................................................................... 20 3 15 0.07 1 1 0
................CCTAAACCGCAGAGAAAGAA............................................................................................................................... 20 3 17 0.06 1 0 1
.........................CAGAAAATGACTGTGATAAT...................................................................................................................... 20 3 18 0.06 1 1 0
...........................GAAACTGACTGAGATAAA...................................................................................................................... 18 2 19 0.05 1 1 0
...................AAACCCCAGAAAAAAGCTG............................................................................................................................. 19 2 20 0.05 1 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Type Alignment
droAna3 scaffold_13340:14198932-14199094 - dan_123 confident GGCAATGA-----------------------------------------------------------------------------------------------------------------------------------------------------------------G-TG--GAAAAGGATTTGGG-----------------------------------------------------------GTCTTTTTCTGACTCTATTTTGTCGGCGAACATGGATCTAGTGCACGGT-GTTTCATGATTAAGTTCGTGACTAGATTTCATGCTCGTCTATTAAGTTGGGTCAGCACAC----CAA----------AGAGT-----------C---------------------GGATAG----TGGAGAG--TCAAC----------TA------
droBip1 scf7180000395971:964810-964994 + GGCAATAATCATGGAT---------------------------TA----------------------------GTGGCTTGGACTGGACTGGACGGGAAAAAAGCT----A-----------------------------------------------------------------------GAAAGGA----------------------------------------------------------TGCTCTTTTCTGACTCTATTTTGTCGGCGAACATGGATCTAGTGCACGGT-GTTTCATGATTAAGTTCGTGACTAGATTTCATGCTCGTCTATTAAGTTGGGTCAGCACAC----CAA----------AGAGAGTCCAC-------------------------------------------------------------AC------
droKik1 scf7180000302466:430729-430919 - GGCAATAATCATCGTT---------------------------CC--A-------------------------------------------AAGGAGGAGG---AG----G-AGT-----------------------------------------------------AGCTGGAGATC-GGGGCAGGA----------------------------------------------------------TGCTCTTTTCTGACTCTATTTTGTCGGCGAACATGGATCTAGTGCACGGT-GTTTCATGATTAAGTTCGTGACTAGATTTCATGCTCGTCTATTAAGTTGGGTCAGCACAA----CAGAACCACAAGAAGAGAGTTTCC-------------------------------------------------------------TT------
droFic1 scf7180000453776:339184-339375 + GGCAATAATCATCATC---------------------------CGAGAAAG----------------------------------------------GAGAAAAAA----A-AGA-----------------------------------------------------AG--------CTGGGGAAGGA----------------------------------------------------------TGCTCTTTTCTGACTCTATTTTGTCGGCGAACATGGATCTAGTGCACGGT-GGTTCATGATTAAGTTCGTGACTAGATTTCATGCTCGTCTATTAAGTTGGGTCAGCACAA----CGA----------AGAGAGTTTTTC---TCGG------------------G------------GGGA-----------------GTT-TCGAA
droEle1 scf7180000491280:1230530-1230733 + GGCAATAATCATCATC---------------------------CGCGAAAAGACAAAAAAAAAAAAAAACTAA------------------A--AAG-AAAA------------------------------------------------------------------AG---------CTGGTAAGGA----------------------------------------------------------TGCTCTTTTCTGACTCTATTTTGTCGGCGAACATGGATCTAGTGCACGGT-GGTTCATGATTAAGTTCGTGACTAGATTTCATGCTCGTCTATTAAGTTGGGTCAGCACAA----CGA----------AGAGAGTTTTCC---CCGG------------------G------------G---G--C-----------CAGTT------
droRho1 scf7180000779659:58334-58519 - GGCAATAATCATCATC---------------------------CG----------------------------------------------CGAAAGGAAAAAGCC----A-AAA-----------------------------------------------------AG--------CTGGGGAGGGA----------------------------------------------------------TGCTCTTTTCTGACTCTATTTTGTCGGCGAACATGGATCTAGTGCACGGT-GGTTCATGATTAAGTTCGTGACTAGATTTCATGCTCGTCTATTAAGTTGGGTCAGCACAA----CGA----------AGAGAGTTTTCC---CCGG------------------G------------G------------------------TGGCA
droBia1 scf7180000302136:3095543-3095766 - GGCAATAATCATCATCATCATCATCGTAGTCGTCATGCTGCTCCG------------------------------------------------CAAGCAAGGATGC------GGA--------------------------------------------------------TGCGGATGCGGATGCGGA----------------------------------------------------------GGCTCTTTTCTGACTCTATTTTGTCGGCGAACATGGATCTAGTGCACGGT-GGCTCATGGTGAAGTTCGTGACTAGATTTCATGCTCGTCTATTAAGTTGGGTCAGCACAG----CGA----------AGAGAGTTTTCCCTGCCGA------------------------G------GGGG-----------------GTT-CCCCG
droTak1 scf7180000415310:303345-303559 + GGCAATAATCATCATCATCATCAT------------------CCGCGAAAG----------------------------------------------GAGAAAAAGGAAGGAGGA--------------------------------------------------------TGTGGATGTGGATGTGGA----------------------------------------------------------TGCTCTTTTCTGACTCTATTTTGTCGGCGAACATGGATCTAGTGCACGGT-GGTTCATGATTAAGTTCGTGACTAGATTTCATGCTCGTCTATTAAGTTGGGTCAGCACAA----CGA----------AGAGAGTTTTCC---TCGAGGGGATGT----------------G----TGGGGAG-----------------T-------
droEug1 scf7180000409787:530952-531110 - GGCAATAATCATCATC---------------------------CGCGAATG----------------------------------------------GGGAAGGAA----A-----------------------------------------------------------------------GGAAGGA----------------------------------------------------------TGCTCTTTTCTGACTCTATTTTGTCGGCGAACATGGATCTAGTGCACGGT-GGTTCATGATTAAGTTCGTGACTAGATTTCATGCTCGTCTATTAAGTTGGGTCAGCACAA----CGA----------AGAGA---------------------------------------------------------------------------
dm3 chr3R:25042841-25043021 + dme-mir-996 Known_mirbase GGCAATAATCATCATC---------------------------CG----------------------------------------------GGCGAGAAAGGAGCC----C-AAT-----------------------------------------------------AG-TGGGGATGTGGGGAAGGA----------------------------------------------------------TGCTCTTTTCTGACTCTATTTTGTCGGCGAACATGGATCTAGTGCACGGT-GGTTCATGATTAAGTTCGTGACTAGATTTCATGCTCGTCTATTAAGTTGGGTCAGCACAA----CGA----------AGAGAGC-------------------------------G--GAG------------------------------------
droSim2 3r:24401301-24401483 + dsi_99 confident GGCAATAATCATCATC---------------------------CG----------------------------------------------GGCGAGAAAGGAGCC----C-AAA-----------------------------------------------------AG-TGGGGATGTGGGGAAGGA----------------------------------------------------------TGCTCTTTTCTGACTCTATTTTGTCGGCGAACATGGATCTAGTGCACGGT-GGTTCATGATTAAGTTCGTGACTAGATTTCATGCTCGTCTATTAAGTTGGGTCAGCACAA----CGA----------AGAGAGC-------------------------------G--CAG----------------------------CT------
droSec2 scaffold_4:3905634-3905814 + dse_174 confident GGCAATAATCATCATC---------------------------CG----------------------------------------------GGCGAGAAAGAAGCC----C-AAA-----------------------------------------------------AG-TGGGGATGTGGGGAAGGA----------------------------------------------------------TGCTCTTTTCTGACTCTATTTTGTCGGCGAACATGGATCTAGTGCACGGT-GGTTCATGATTAAGTTCGTGACTAGATTTCATGCTCGTCTATTAAGTTGGGTCAGCACAA----CGA----------AGAGAGC-------------------------------G--GAG------------------------------------
droYak3 3R:21454381-21454594 - dya_9 confident GGCAATAATCATCATC---------------------------CG----------------------------------------------AGCGAGAAAGGAGCC----CCAAATGTG--------------------------------------------------G-GGGGGATGTGGGGAAGGA----------------------------------------------------------TGCTCTTTTCTGACTCTATTTTGTCGGCGAACATGGATCTAGTGCACGGT-GGTTCATGATTAAGTTCGTGACTAGATTTCATGCTCGTCTATTAAGTTGGGTCAGCACTA----CGA----------AGAGAGCTTTCCATCTCGCGGGGATC------------G--GAG-------GGAG--T-----------TCGTT------
droEre2 scaffold_4820:2987374-2987587 - der_12 confident GGCAATAATCATCATC---------------------------CG----------------------------------------------AGCGAGAAAGGAGCC----C-CAC-----------------------------------------------------AG-CGGAGAAGTGGGGAAGGA----------------------------------------------------------TGCTCTTTTCTGACTCTATTTTGTCGGCGAACATGGATCTAGTGCACGGT-GGTTCATGATTAAGTTCGTGACTAGATTTCATGCTCGTCTATTAAGTTGGGTCAGCACTA----CGA----------AGAGAGCTTTCCATCTCGCGGGGATCGGAACGGGATC-G--GAG-------GGA--------------------------
dp5 2:1883522-1883757 + dps_3 confident GGCAATAATCATCATT---------------------------TG----------------------------------------------GAGGAGGAA----------------------------------------------------------------------------------GAAAGGATGGACCCCGTAACAGTGCCAGAGCCAGAGCCAGAGCCTGGGTCTGATCCGGCAGCGTTTGCTCTTCTCTGACTCTATTTTGTCGGCGAACATGGATCTAGTGCACGGT-TGTTCATGATTAAGTTCGTGACTAGATTTCATGCTCGTCTATTAAGTTGGGTCAACACAA----CGA-ACCGAAAGAGC------------------------------------A--GAGCAAC-------------G-------CAGTTGTCGAA
droPer2 scaffold_7:2046941-2047170 + dpe_11 confident GGCAATAATCATCATT---------------------------TG----------------------------------------------GAGGAGGAA----------------------------------------------------------------------------------GAAAGGATGGACCCCGTAACAGTGCCAGAG------CCAGAGCCTGGGTCTGATCCGGCAGCGTTTGCTCTTCTCTGACTCTATTTTGTCGGCGAACATGGATCTAGTGCACGGT-TGTTCATGATTAAGTTCGTGACTAGATTTCATGCTCGTCTATTAAGTTGGGTCAACACAA----CGA-ACCGAAAGAGC------------------------------------A--GAGCAAC-------------G-------CAGTTGTCGAA
droWil2 scf2_1100000004921:1735890-1736156 + dwi_122 confident GGCAATAATCATTGTA---------------------------GG----------------------------------------------ATTGAG-------------CTGGATGTGGATGAGATGTGAGTGAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGA---T--GGA--T--GGATGGATGGAGTCCTT-------------------------------TCT-ATGTGGCAGCGT---CTCT----TGACTCTATTTTGTCGGCGAACATGGATCTAGTGCACGGTTTGTTCATGATTAAGTTCGTGACTAGATTTCATGCTCGTCTATTAAGTTGGGTCAGCACAA----CA-----------AGAGC---------------------------------G--CAG----CGGAGAGGGCAAACTATAATGCAGTTAATGTG
droVir3 scaffold_12822:2333408-2333516 + dvi-mir-996 Known_mirbase G--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTTCTCTGACTCTATTTTGTCGGCGAACATGGATCTAGTGCACGGT-TGTTCATGATTAAGTTCGTGACTAGATTTCATGCTCGTCTATTAAGTTGGGTCAACACAC-------------------------------------------------------------------------------------------------
droMoj3 scaffold_6540:26449278-26449386 + dmo_146 confident G--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTTCTCTGACTCTATTTTGTCGGCGAACATGGATCTAGTGCACGGT-TGTTCATGATTAAGTTCGTGACTAGATTTCATGCTCGTCTATTAAGTTGGGTCAATACAC-------------------------------------------------------------------------------------------------
droGri2 scaffold_14624:3251568-3251706 + dgr_2 confident G--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTTTTCTGACTCTATTTTGTCGGCGAACATGGATCTAGTGCACGGT-TGTTCATGATTAAGTTCGTGACTAGATTTCATGCTCGTCTATTAAGTTGGGTCAACACACAACACAAAAAAAAAAGAGGAGAGC--------------------------------------AAA-------------G----------CA------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droAna3
GGCAATGA-----------------------------------------------------------------------------------------------------------------------------------------------------------------G-TG--GAAAAGGATTTGGG-----------------------------------------------------------GTCTTTTTCTGACTCTATTTTGTCGGCGAACATGGATCTAGTGCACGGT-GTTTCATGATTAAGTTCGTGACTAGATTTCATGCTCGTCTATTAAGTTGGGTCAGCACAC----CAA----------AGAGT-----------C---------------------GGATAG----TGGAGAG--TCAAC----------TA------SizeHit CountTotal NormTotalM044

Female-body
M058

Embryo
V039

Embryo
V055

Head
V105

Male-body
V106

Head
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGT.......................................................................................................................20127015.0027015265068714072047118418383
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTCT.....................................................................................................................22126395.00263956750195910311054721943914
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTC......................................................................................................................21110648.001064832612400737156214691219
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTCTA....................................................................................................................2315080.00508018851163057132941767
................................................................................................................................................................................................................................................................................GGCGAACATGGATCTAGTGCACG................................................................................................................................................................2312985.002985715118251224851520
..............................................................................................................................................................................................................................................................................................................................ACTAGATTTCATGCTCGTCT.....................................................................................................................2011404.001404731451116124
.................................................................................................................................................................................................................................................................................GCGAACATGGATCTAGTGCACG................................................................................................................................................................2211299.001299341462580410397
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCG........................................................................................................................1911032.00103244711416833171
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTCC.....................................................................................................................221624.006241057981827
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTCA.....................................................................................................................221506.0050615687239987
.............................................................................................................................................................................................................................................................................................................................GACTAGATTTCATGCTCGTCT.....................................................................................................................211503.0050348491531
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTCTT....................................................................................................................231447.004471513611136140
.............................................................................................................................................................................................................................................................................................................................GACTAGATTTCATGCTCGTC......................................................................................................................201243.0024323710005
.............................................................................................................................................................................................................................................................................................................................GACTAGATTTCATGCTCGT.......................................................................................................................191192.0019218110154
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGC.......................................................................................................................201191.001912141522912
..............................................................................................................................................................................................................................................................................................................................ACTAGATTTCATGCTCGTCTA....................................................................................................................211166.00166111111511
................................................................................................................................................................................................................................................................................GGCGAACATGGATCTAGTGCAC.................................................................................................................................................................221161.001616244141040
.............................................................................................................................................................................................................................................................................................................................GACTAGATTTCATGCTCGTCTA....................................................................................................................221138.0013813800000
................................................................................................................................................................................................................................................................................GGCGAACATGGATCTAGTGCA..................................................................................................................................................................211129.001293412351857
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTT......................................................................................................................211100.001002031204313
.................................................................................................................................................................................................................................................................................GCGAACATGGATCTAGTGCAC.................................................................................................................................................................21198.009833461396
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTCTAT...................................................................................................................24180.008041412536
..............................................................................................................................................................................................................................................................................................................................ACTAGATTTCATGCTCGTC......................................................................................................................19154.005435501121
.................................................................................................................................................................................................................................................................................GCGAACATGGATCTAGTGCA..................................................................................................................................................................20149.004915102274
...............................................................................................................................................................................................................................................................................................................................CTAGATTTCATGCTCGTCT.....................................................................................................................19148.00484300140
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTA......................................................................................................................21147.004730442511
................................................................................................................................................................................................................................................................................GGCGAACATGGATCTAGTGC...................................................................................................................................................................20146.004611620126
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTCTAA...................................................................................................................24145.0045121111605
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTCG.....................................................................................................................22145.004519012113
..............................................................................................................................................................................................................................................................................................................................ACTAGATTTCATGCTCGTCTT....................................................................................................................21142.004226000142
..................................................................................................................................................................................................................................................................................CGAACATGGATCTAGTGCACG................................................................................................................................................................21141.00413900110
................................................................................................................................................................................................................................................................................GGCGAACATGGATCTAGTGCACGT...............................................................................................................................................................24138.00383212327
.............................................................................................................................................................................................................................................................................................................................GACTAGATTTCATGCTCG........................................................................................................................18138.00383800000
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTCTC....................................................................................................................23131.003111121403
.................................................................................................................................................................................................................................................................................GCGAACATGGATCTAGTGC...................................................................................................................................................................19126.00267121015
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCT........................................................................................................................19124.0024620646
.......................................................................................................................................................................................................................................................................................................GT-GTTTCATGATTAAGTTCG...........................................................................................................................................20123.0023264047
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTCTG....................................................................................................................23122.00221202215
...............................................................................................................................................................................................................................................................................CGGCGAACATGGATCTAGTGCACG................................................................................................................................................................24121.00211700202
................................................................................................................................................................................................................................................................................GGCGAACATGGATCTAGTGCACT................................................................................................................................................................23120.00200011117
.................................................................................................................................................................................................................................................................................GCGAACATGGATCTAGTGCACGT...............................................................................................................................................................23120.00201120052
..............................................................................................................................................................................................................................................................................................................................ACTAGATTTCATGCTCGT.......................................................................................................................18119.00191600030
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTG......................................................................................................................21119.00192021131
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTCTAC...................................................................................................................24117.00171311200
................................................................................................................................................................................................................................................................................................................................TAGATTTCATGCTCGTCT.....................................................................................................................18116.0016920131
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGA.......................................................................................................................20115.0015222225
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTC.........................................................................................................................18115.0015421701
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGG.......................................................................................................................20114.0014115502
...............................................................................................................................................................................................................................................................................................................................CTAGATTTCATGCTCGTCTA....................................................................................................................20113.00131100020
...................................................................................................................................................................................................................................................................................GAACATGGATCTAGTGCACG................................................................................................................................................................20112.0012700140
.............................................................................................................................................................................................................................................................................................................................GACTAGATTTCATGCTCGTCTT....................................................................................................................22111.00111100000
...........................................................................................................................................................................................................................................................................................................................GTGACTAGATTTCATGCTCGTC......................................................................................................................22110.0010320005
.............................................................................................................................................................................................................................................................................................................................GACTAGATTTCATGCTCGTCA.....................................................................................................................21110.00101000000
..............................................................................................................................................................................................................................................................................................................................ACTAGATTTCATGCTCGTCTAT...................................................................................................................22110.0010500050
..............................................................................................................................................................................................................................................................................................................................ACTAGATTTCATGCTCGTCC.....................................................................................................................20110.00100100000
.................................................................................................................................................................................................................................................................................GCGAACATGGATCTAGTGCACT................................................................................................................................................................2219.009100107
.................................................................................................................................................................................................................................................................................GCGAACATGGATCTAGTG....................................................................................................................................................................1818.008300005
.................................................................................................................................................................................................................................................................................GCGAACATGGATCTAGTGCACGG...............................................................................................................................................................2318.008300122
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTCTAG...................................................................................................................2418.008322001
...........................................................................................................................................................................................................................................................................................................................GTGACTAGATTTCATGCTCGTCT.....................................................................................................................2318.008701000
droBip1
GGCAATAATCATGGAT---------------------------TA----------------------------GTGGCTTGGACTGGACTGGACGGGAAAAAAGCT----A-----------------------------------------------------------------------GAAAGGA----------------------------------------------------------TGCTCTTTTCTGACTCTATTTTGTCGGCGAACATGGATCTAGTGCACGGT-GTTTCATGATTAAGTTCGTGACTAGATTTCATGCTCGTCTATTAAGTTGGGTCAGCACAC----CAA----------AGAGAGTCCAC-------------------------------------------------------------AC------SizeHit CountTotal NormTotal
No Reads
droKik1
GGCAATAATCATCGTT---------------------------CC--A-------------------------------------------AAGGAGGAGG---AG----G-AGT-----------------------------------------------------AGCTGGAGATC-GGGGCAGGA----------------------------------------------------------TGCTCTTTTCTGACTCTATTTTGTCGGCGAACATGGATCTAGTGCACGGT-GTTTCATGATTAAGTTCGTGACTAGATTTCATGCTCGTCTATTAAGTTGGGTCAGCACAA----CAGAACCACAAGAAGAGAGTTTCC-------------------------------------------------------------TT------SizeHit CountTotal NormTotal
No Reads
droFic1
GGCAATAATCATCATC---------------------------CGAGAAAG----------------------------------------------GAGAAAAAA----A-AGA-----------------------------------------------------AG--------CTGGGGAAGGA----------------------------------------------------------TGCTCTTTTCTGACTCTATTTTGTCGGCGAACATGGATCTAGTGCACGGT-GGTTCATGATTAAGTTCGTGACTAGATTTCATGCTCGTCTATTAAGTTGGGTCAGCACAA----CGA----------AGAGAGTTTTTC---TCGG------------------G------------GGGA-----------------GTT-TCGAASizeHit CountTotal NormTotal
No Reads
droEle1
GGCAATAATCATCATC---------------------------CGCGAAAAGACAAAAAAAAAAAAAAACTAA------------------A--AAG-AAAA------------------------------------------------------------------AG---------CTGGTAAGGA----------------------------------------------------------TGCTCTTTTCTGACTCTATTTTGTCGGCGAACATGGATCTAGTGCACGGT-GGTTCATGATTAAGTTCGTGACTAGATTTCATGCTCGTCTATTAAGTTGGGTCAGCACAA----CGA----------AGAGAGTTTTCC---CCGG------------------G------------G---G--C-----------CAGTT------SizeHit CountTotal NormTotal
No Reads
droRho1
GGCAATAATCATCATC---------------------------CG----------------------------------------------CGAAAGGAAAAAGCC----A-AAA-----------------------------------------------------AG--------CTGGGGAGGGA----------------------------------------------------------TGCTCTTTTCTGACTCTATTTTGTCGGCGAACATGGATCTAGTGCACGGT-GGTTCATGATTAAGTTCGTGACTAGATTTCATGCTCGTCTATTAAGTTGGGTCAGCACAA----CGA----------AGAGAGTTTTCC---CCGG------------------G------------G------------------------TGGCASizeHit CountTotal NormTotal
No Reads
droBia1
GGCAATAATCATCATCATCATCATCGTAGTCGTCATGCTGCTCCG------------------------------------------------CAAGCAAGGATGC------GGA--------------------------------------------------------TGCGGATGCGGATGCGGA----------------------------------------------------------GGCTCTTTTCTGACTCTATTTTGTCGGCGAACATGGATCTAGTGCACGGT-GGCTCATGGTGAAGTTCGTGACTAGATTTCATGCTCGTCTATTAAGTTGGGTCAGCACAG----CGA----------AGAGAGTTTTCCCTGCCGA------------------------G------GGGG-----------------GTT-CCCCGSizeHit CountTotal NormTotal
No Reads
droTak1
GGCAATAATCATCATCATCATCAT------------------CCGCGAAAG----------------------------------------------GAGAAAAAGGAAGGAGGA--------------------------------------------------------TGTGGATGTGGATGTGGA----------------------------------------------------------TGCTCTTTTCTGACTCTATTTTGTCGGCGAACATGGATCTAGTGCACGGT-GGTTCATGATTAAGTTCGTGACTAGATTTCATGCTCGTCTATTAAGTTGGGTCAGCACAA----CGA----------AGAGAGTTTTCC---TCGAGGGGATGT----------------G----TGGGGAG-----------------T-------SizeHit CountTotal NormTotal
No Reads
droEug1
GGCAATAATCATCATC---------------------------CGCGAATG----------------------------------------------GGGAAGGAA----A-----------------------------------------------------------------------GGAAGGA----------------------------------------------------------TGCTCTTTTCTGACTCTATTTTGTCGGCGAACATGGATCTAGTGCACGGT-GGTTCATGATTAAGTTCGTGACTAGATTTCATGCTCGTCTATTAAGTTGGGTCAGCACAA----CGA----------AGAGA---------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
dm3
GGCAATAATCATCATC---------------------------CG----------------------------------------------GGCGAGAAAGGAGCC----C-AAT-----------------------------------------------------AG-TGGGGATGTGGGGAAGGA----------------------------------------------------------TGCTCTTTTCTGACTCTATTTTGTCGGCGAACATGGATCTAGTGCACGGT-GGTTCATGATTAAGTTCGTGACTAGATTTCATGCTCGTCTATTAAGTTGGGTCAGCACAA----CGA----------AGAGAGC-------------------------------G--GAG------------------------------------SizeHit CountTotal NormTotalGSM154618

Ovary
GSM154620

Ovary
GSM154621

Ovary
GSM154622

Ovary
GSM180328

Head
GSM180329

Mixed-body
GSM180330

Embryo
GSM180331

Embryo
GSM180332

Embryo
GSM180333

Embryo
GSM180334

Larvae
GSM180335

Disc
GSM180336

Pupae
GSM180337

S2
GSM239041

Head
GSM239050

Head
GSM239051

S2
GSM239052

S2
GSM246084

Head
GSM266765

S2
GSM280082

Ovary
GSM280083

Ovary
GSM280084

Ovary
GSM280085

Testis
GSM280086

Ovary
GSM280087

S2-NP
GSM280088

S2-NP
GSM312995

Head
GSM313160

Head
GSM313161

Head
GSM313162

Head
GSM313163

Head
GSM313164

Head
GSM313165

Head
GSM343287

Embryo
GSM379050

Ovary
GSM379051

Ovary
GSM379052

Ovary
GSM379053

Ovary
GSM379054

Ovary
GSM379055

Ovary
GSM379056

Ovary
GSM379057

Ovary
GSM379058

Ovary
GSM379059

Ovary
GSM379060

Ovary
GSM379061

Ovary
GSM379062

Ovary
GSM379063

Ovary
GSM379064

Ovary
GSM379065

Ovary
GSM379066

Ovary
GSM379067

Ovary
GSM424739

S2
GSM424740

S2
GSM424741

S2
GSM467729

Female-body
GSM467730

Female-body
GSM467731

Female-body
M002

CS
M003

Male-body
M004

Male-body
M005

ML-DmD32
M006

ML-DmD32
M029

OSC
M030

OSC
M031

OSC
M032

S2-R+
M033

S2-R+
M034

S2-R+
M035

S2-R+
M036

S2-R+
M037

S2-R+
M038

S2-R+
M039

S2-R+
M048

S2-R+
OSS2

OSS
OSS6

OSS
OSS7

OSS
OSS8

OSS
S1

Head
S10

Embryo
S11

Embryo
S12

Embryo
S13

Embryo
S14

Embryo
S15

S2-GMR
S16

Kc
S17

Larvae
S18

Larvae
S19

Pupae
S2

Head
S20

Pupae
S21

Disc
S22

Head
S23

Female-body
S24

Male-body
S25

Larvae
S26

Larvae
S27

Pupae
S28

Pupae
S29

Head
S3

Male-body
S30

S2-GMR
S31

S2
S32

S2
S33

Kc
S34

Kc
S35

Kc
S4

Female-body
S5

Disc
S6

Embryo
S7

Embryo
S8

S2
S9

Embryo
SRR001337

Head
SRR001338

Head
SRR001339

Head
SRR001340

Head
SRR001341

Head
SRR001342

Head
SRR001343

Head
SRR001344

Head
SRR001345

Head
SRR001346

Head
SRR001347

Head
SRR001348

Head
SRR001349

Head
SRR001664

Head
SRR010951

Ovary
SRR010952

Ovary
SRR010953

Ovary
SRR010954

Ovary
SRR010955

Ovary
SRR010956

Ovary
SRR010957

Ovary
SRR010958

Ovary
SRR010959

Ovary
SRR010960

Ovary
SRR014268

Embryo
SRR014269

Embryo
SRR014270

Embryo
SRR014271

Embryo
SRR014272

Embryo
SRR014273

Ovary
SRR014274

Ovary
SRR014275

Ovary
SRR014276

Ovary
SRR014277

Ovary
SRR014278

Ovary
SRR014279

Ovary
SRR014280

Ovary
SRR014281

Ovary
SRR014282

Ovary
SRR023197

S2
SRR023399

S2
SRR023400

S2
SRR023402

S2
SRR023407

S2
SRR029028

S2
SRR029029

S2
SRR029030

S2
SRR029031

S2
SRR029032

S2
SRR029033

S2
SRR029608

Head
SRR029633

Head
SRR030145

gb3
SRR031692

Head
SRR031693

Head
SRR031694

Head
SRR031696

Head
SRR031697

Head
SRR031698

Head
SRR031699

Head
SRR031700

Head
SRR031701

Head
SRR031702

Head
SRR031703

Head
SRR031704

Head
SRR032092

S2
SRR032093

S2
SRR032094

S2
SRR032095

S2-NP
SRR032096

S2-NP
SRR032152

Head
SRR060643

Testis
SRR060644

Ovary
SRR060645

Testis
SRR060646

Ovary
SRR060647

Ovary
SRR060648

Ovary
SRR060649

Ovary
SRR060650

Testis
SRR060651

Ovary
SRR060652

Testis
SRR060653

Ovary
SRR065151

Ovary
SRR065152

Ovary
SRR065153

Ovary
SRR065154

Ovary
SRR065155

Ovary
SRR065800

Ovary
SRR065801

Ovary
SRR065802

Ovary
SRR065803

Ovary
SRR065804

Ovary
SRR065805

Ovary
SRR065806

Ovary
SRR065807

Ovary
SRR097865

S2-NP
SRR097866

S2-NP
SRR097867

S2-NP
SRR298536

Ovary
SRR298537

Ovary
SRR298711

Ovary
SRR298712

Ovary
SRR317110

Ovary
SRR317111

Ovary
SRR317112

Ovary
SRR317113

Ovary
SRR317114

Ovary
SRR317115

Ovary
SRR317116

Ovary
SRR317117

Ovary
SRR341115

S2
SRR341116

S2
SRR341117

S2
SRR341118

S2
SRR351332

Mixed-body
SRR351333

Mixed-body
T004

OSC
T005

CME-L1
V001

Embryo
V002

Embryo
V003

S2
V006

Female-body
V007

Head
V008

S2
V009

CME-L1
V010

ML-DmD20-C5
V011

Sg4
V012

Male-body
V013

Head
V014

DTT
V015

DreRFHV
V018

Kc167
V019

GM2
V020

S2-R+
V021

ML-DmD21
V022

ML-DmD32
V023

Head
V024

Kc167
V025

S2-R+
V026

1182-2H
V027

ML-DmD21
V028

CME-W1-Cl.8+
V029

ML-DmD9
V030

ML-DmD8
V031

GM2
V032

S1
V033

CME-W1-Cl.8+
V034

ML-DmD16-C3
V035

ML-DmD32
V036

ML-DmD20-C5
V037

S2
V038

S2
V063

Ovary
V0632

Ovary
V064

Ovary
V0642

Ovary
V065

Ovary
V0652

Ovary
V066

Ovary
V0662

Ovary
V067

S2-NP
V073

mbn2
V074

S3
V075

ML-DmBG1-C1
V076

ML-DmBG3-C2
V077

Head
V078

Head
V079

Head
V080

Head
V081

Embryo
V082

Embryo
V083

Male-body
V084

Female-body
V085

CME-W2
V086

Female-body
V088

Ovary
V0882

Ovary
V089

Ovary
V0892

Ovary
V090

Male-body
V091

fGS/OSS
V092

Male-body
V093

Male-body
V094

S2-R+
V095

S2-R+
V096

Ovary
V097

Ovary
V098

Ovary
V125

ML-DmD9
V126

CME-L1
V127

G2
V128

S3
V129

ML-DmBG1-C1
V130

ML-DmBG3-C2
V131

ML-DmD16-C3
V132

ML-DmD32
V133

Sg4
V134

ML-DmD8
V135

CME-W2
V136

Male-body
V137

Head
V138

Male-body
V139

Female-body
V140

Female-body
V141

Female-body
V142

Female-body
V144

OSC
V145

S2
V146

S1
V147

1182-2H
V148

mbn2
GSM1528798

follicle cells
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTCT.....................................................................................................................2212725839.0027258390000297871403201191586211299442221506290101296768863510133461717117488683210843424573410584912157548006202224440438304666181274585216755611601353425649090692754206426488082115000000000000000008501486043687755830444273049462372166527557812448842835920849013639461479196624471881741905374576403331705522775512832143353076543510918170562232493866522321111461124920800919871609824123312679793349021016514749152872897784820072283973265129242310342453175241177616677112901916193915123338735931364243473515376440390364336174907122796886545919204809337338515684599189771231727218587308696164557630570377879525401782000000412232239095816144291662150501260065241107849090915171352696855566282571206389624625390116436576981646030100431845052401187812424946309931796529174617747441258300786086111515746186617448177377603129221091413401106465171245931903024111237597113205529985139908044320767110800137279393011226814111117452624730176816406274833092767332720905008157920753215121829224595584920880018781119010111543218715477221191023288418108166037352644676462245853485456060013201088373522581682716128382804185694406103606931110222744
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTC......................................................................................................................2111157491.0011574910000913693945722101810334179132342011209241188103437202632221952835330231290161516331235123026531553685744519136766816122348509153281888713626376015081790000000000000000031052304702511718851196121255955689414775447146067402232684324510076585112925204520205710314416188523196257621756138117214752511020471344354825101109393412883742236515101933420382813016305548014801210024563229348041144448282930731029188042491428693104586518423421113393003161679516450521545574051955524790839238919096146522906527119163140625415912101102501380751100448200000179340715971664010014613139098043121951728041879030112978265731614930168498213549924132267216236489610072383818204967095500107115691347465689279420962157733471052948262199269472160338412586861237516254360129619636641044309573506854723197410485571327416503234510328961192364159637394490175714091432175622289185535251486663807416996393970941094566510481368130414271131088567945164501714112691079673201152802542208127922087712907118412992663118113077649883921116271113148252
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGT.......................................................................................................................2011148241.00114824100001115125103304072313003492374804339019784579293642741014601645554151357229413259910772733503333042977851074130443930025723172131347156000000000000000001009106984467248117441771681386092221042156132386981309115316348718142716453896944248264283371341978414176267057062701136141292701701123754301522524147391144949919162411721048826947971730177464079312454132101170472935600715339480427944088640211165216324333998334933297968718075414903051097782669994761642650032645861572622662564714422764550187602409417168406756491209346712202641103023331785190678442111269212627070000161177721608186692251319239611251134326542690130071787662223442805114616334306148221636736792177076726340125052283769257943822195303016482600231140390325928174812160147341261410251127769966044347653971052929113614401199663531972707545628914937288097363396378815991703173246293989027452733844051354032708185249481328053501141511158031430298003396961075928636136435383951028547860475311312
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTCTA....................................................................................................................231797971.0079797111001176393258264206911939633016610154002809227710401285543002528216107702511231652712399221632767294967987020656324095174548403921114767290461615110490195168185000000000000000001251212608985582621756001107981374998232470373049504475309675945822211240233218792072411834362235392768564170003347811151303234776541813234210611921249419467131503361403653677940002025042564410801943183726127495414191107487810985647294487134724384183236162663828244589133545231016641909014471251539838266413113784616432364834431229636749043753653517861999111464215201681106202100006459053031711581567192718051033277692416923456754517825024761864262462212263849134478293866291900148214371301262409885154510473347517518818520544458113675170811113663087119630892106149626527883553438372895435181544922707443825836526827707452131327505536978126084512074411249370526395584764942811303881399582199531704300132227671692972127499874763913274125995197597521588401745783158017039819881827024578653241524561542206925712161560
................................................................................................................................................................................................................................................................................GGCGAACATGGATCTAGTGCACG................................................................................................................................................................231266747.00266747000073320381671812250003500579673605701227292424001731724765104461955411032557208126517639014156761508111480000000000000000010812210011993551561216111770602363125464491953128205162104111118623723811149020733385142824230128721933410310832360070594622922732001143201022287929310257446505588451273475486433209000005621553307002323545743047251215373527327111066680774189915885623369249236177265322422349100003092032564852929482817122790391422050799626710591074116338294941941422163082317000024119945187293294403155672287232532581621230236311392572023250925653645280187465588188211352702232318215821048617501032915009499154692972895698941625110239032236842433981381258260246517812555766136364022681046649537912011184476346234478126582714333760782982244819164378644946273423953206279475334326582359322629102219029150
.................................................................................................................................................................................................................................................................................GCGAACATGGATCTAGTGCACG................................................................................................................................................................221211289.00211289000017112127778410232311083787352511794320179418259111220108176839714975267441123271271835215130943219310515879504488095000000000000000007181508014329876496681112673139424236482711412211115515102182864281349210041960100126446937801585411416131164754110136212279926211741174161415827230724410634269460678257573953840136625230001402874174441081433641670202415228141274952810037414605822814048211722285245189220494563426742612431534816011313075041377816545251429402608153113221846595184511233428321175133949768884892511029757200000208247942401403762491653055729116714018249722205222282721175296668898477207108574714211786922874875155239535773715788513551734599937405192468391452699100314822383130238731922403268434043912438539442753805071198516455091657145961526130231392072115116521126726012872234442819265171178616317751105154350621548103298491714
................................................................................................................................................................................................................................................................................GGCGAACATGGATCTAGTGCA..................................................................................................................................................................21135756.00357560000220031011150000002479018324700000217690531293365096169120620331770000000000000000020021614221413911628710505101843712231122288124523228541149181620884122417184571622400300050203800000010401012311191271316420223390002114228753887648111906651996711314551642286243154710716670507000000871100002019120459715271114491933344731184124834421360200101512155142201152413111431751219347326267273113361752352488338263827228145875061951229115655207115545327241223134113214472616115549184686762677140331125913354562101551053687277381132301533110137901759535313730415642411061630
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTCTAA...................................................................................................................24123765.002376500009628581612162310000002615210009000000010821321220272974720519118795126000000000000000000000002447261520601642510423944172746603717181348261045116147471084477178111032125026875412398644462023211349509000020003012300000000002919262036213347272913210301400000606179182101300151405122019003030522347312201303240000039270000007542501531714927410810711355722663500381460043233139626634012217552343616714132151130135922718961589106816985050701118201143585911012101012221611211100103500333821810661637
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCG........................................................................................................................19120482.00204820000000000000010050081816407126355311913886881358283722347816283743000764000000000000000002702752891338299262625110441351175152014251223469741652405332023370381563125035001002302863619411311532055621621410994323222425516924420010296150174250256139401160212319216317374211211213662593725428391920024018250111701670044003784172904264435660268651358893451872641213448020021173562414310301317592123712416118451532101331720130543092466151150133126465622878336562873023822831727273551039612318431425549111127277325464617357575813485579148191163239164893718904113502147487855705992368203628118
................................................................................................................................................................................................................................................................................GGCGAACATGGATCTAGTGCAC.................................................................................................................................................................22116070.00160700000111101021500010059330613130230104621415303331479520150202360000000000000000015018011618004167039859199230241644730223915011922044047172418103152002000010102133000004012055121091341111101515168107202117162141617717082123023926141604411614910637301056023002231203100023015072402675154451171151805411271383272632100009112111215224330384884497188512201715119162318125331218380145983217127715110591761162145142129383412141970310710546832638148840371012480529311682666647175235602262998101222292493151231761780490
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTCTAT...................................................................................................................24115399.0015399000074610751401600010071127000500000002424103176602815379213751886400037574100000000000000000217922371702153514204661076191188475158238401006445323642104640940892135173591336411847760113020010080105000002007012241751411354230361591417150000049744016260220093741901702200072032131314000432000000332600000066522045014195856711368147312151200841007207210104209636629481026217476833132516387174211132532655546161412110010153931426003495150000312240012010352741315130
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTCTT....................................................................................................................23113837.0013837000002182407265001002725571016300000000254026473866213123142015325013511931130170000000000000000000006907545974895251018892010611515141281000313481054102193111283042121819051120012203013419001000013040376042466108126106701281439232500000511369692419911201180085301261105318590712134026612283432200170223130000066760130004761262863186714426334063352713623800290000101549383444372364233031027992313254679940403629392962126168118291185733259894184928839290523627145850503950410871561141642123174341023781813618188715515212034293165639727281916016494087125
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...................................................................................................................................................................................................................................................................................GAACATGGATCTAGTGCACG................................................................................................................................................................201754.0075400000000000000000000000002031000000010110021000011321000100000000000000000000000040241111010000000010003630030001000000100000000000000000000010314254510040001000211000202630050110001110023012029011020040400401000081711223762368208010100002000022011000113120031222100469312134255382221211242060021970111137491600894141341015212316157236642351671270
..............................................................................................................................................................................................................................................................................................................................ACTAGATTTCATGCTCGTC......................................................................................................................191726.0072600000000000000000000010000700000000000000000000010000000000000000000000000005442000000000000000100002002410000000000000000100000000000000000000000112100003000003114251312020200000100120012241807030100000000000001000000552225201211000312000010001101160000000002000111101002001017824197464200101117012102201100001211010018220000011110010502021474010
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTCTAG...................................................................................................................241662.00662000001000100010000000080000000000000401001901011221010000000000000000000000002717131303844360002000221000020188231200311210200000000101200000000000020031412106100000000000012010061020305000010314000000001000007500000001020171121514331876133410310000000110000101012210001011020124409139622011220000040000000000210510000622010000010000000001011200010
..................................................................................................................................................................................................................................................................................CGAACATGGATCTAGTGCAC.................................................................................................................................................................201581.0058100000000000001000000000204000000003000000010000000010000200000000000000000001010100000100001000010000201252200001100100000000000000000000000100301220017000002216000301200000010012100803100200300002000000100020005312671445334311241000010030110111000101010002151108745212193221402148322524677011511153911112117211976135011326127131542088570
................................................................................................................................................................................................................................................................................GGCGAACATGGATCTAGTGCACA................................................................................................................................................................231567.005670000100121010000000001000000000000001002010000100431011000000000000000000000020002132031001000000101001101420162000101000000000000100000000000001110100220217000000201101100000000000000042200010101010000000003001000801110100000010710500000000011000110001100006113301025308751241621706102014001031011110152100400261410127365942301536171032100824140
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCT........................................................................................................................191529.005290000000000000000000000000010000000000000000000000010000000000000000000000000181614140010005020001011000000003450000000002000000000013004700000012100212211000000000232257155528210100000310000142037201011000000000000059000000403430010262012100100000000141010200010140511102307000330000001010400420001000010000010120000000000200400700000514110
................................................................................................................................................................................................................................................................................GGCGAACATGGATCTAGTGCACC................................................................................................................................................................231528.00528000000000000100000000000000000000000100009300010018000100000000000000000000000020221000000110000000000011000000000000000000000000000000000000010101223321000000510026000000000000000000001000000000000000011000000010100012001010100200000201001001010013290502120100101014141951843061622222110010513413352917310033473112003126136001221001305320
droSim2
GGCAATAATCATCATC---------------------------CG----------------------------------------------GGCGAGAAAGGAGCC----C-AAA-----------------------------------------------------AG-TGGGGATGTGGGGAAGGA----------------------------------------------------------TGCTCTTTTCTGACTCTATTTTGTCGGCGAACATGGATCTAGTGCACGGT-GGTTCATGATTAAGTTCGTGACTAGATTTCATGCTCGTCTATTAAGTTGGGTCAGCACAA----CGA----------AGAGAGC-------------------------------G--CAG----------------------------CT------SizeHit CountTotal NormTotalM023

Head
M024

Male-body
M025

Embryo
M053

Female-body
O001

Testis
O002

Head
SRR553485

Ovary
SRR553486

Ovary
SRR553487

Ovary
SRR553488

Ovary
SRR618934

Ovary
V044

Embryo
SRR902008

Ovary
SRR902009

Testis
SRR1275487

Male larvae
SRR1275485

Male prepupae
SRR1275483

Male prepupae
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTCT.....................................................................................................................221222771.002227716010111315582599446528929010212163992113014333092241365091142
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTCTA....................................................................................................................231124999.001249992584524675074922953231538183301652026457814215127001
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGT.......................................................................................................................20173213.007321350941636922202481162021041081099411771401122406101
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTC......................................................................................................................21130242.0030242690187112234622044181194117826011789115932165491043000
.................................................................................................................................................................................................................................................................................GCGAACATGGATCTAGTGCACG................................................................................................................................................................22120765.0020765433616522197354442886113585161446057363124051383011
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGG.......................................................................................................................2015654.0056544677706257000100013000000
.................................................................................................................................................................................................................................................................................................................................AGATTTCATGCTCGTCT.....................................................................................................................1715220.0052200000004728345146001000
................................................................................................................................................................................................................................................................................GGCGAACATGGATCTAGTGCACG................................................................................................................................................................2314064.00406447718311093919351981591521039309180298002
.................................................................................................................................................................................................................................................................................GCGAACATGGATCTAGTGCAC.................................................................................................................................................................2113870.00387028010380494581049183155171162551758562101
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTCTAA...................................................................................................................2413467.0034671122800337359989128038236916000
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTC.........................................................................................................................1812271.0022713831887085117163113385200000
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGC.......................................................................................................................2012251.002251197919355100000023000000
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCT..........................................................................................................................1712137.002137000000352425671986000000
...........................................................................................................................................................................................................................................................................................................................GTGACTAGATTTCATGCTCGTC......................................................................................................................2212091.0020918551414695371321266550156102844000
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCG........................................................................................................................1911754.001754427801527466566888121161515000
.................................................................................................................................................................................................................................................................................GCGAACATGGATCTAGTGCA..................................................................................................................................................................2011750.00175052213153147498970365380311254000
.................................................................................................................................................................................................................................................................................GCGAACATGGATCTAGTGCACGG...............................................................................................................................................................2311714.001714835174103236212206565015319221506005
................................................................................................................................................................................................................................................................................................................................TAGATTTCATGCTCGTCT.....................................................................................................................1811484.001484552000207101453000000
..................................................................................................................................................................................................................................................................................CGAACATGGATCTAGTGCACGG...............................................................................................................................................................2211392.0013921715813010391622307276571397304000
.................................................................................................................................................................................................................................................................................................................................AGATTTCATGCTCGTCTA....................................................................................................................1811386.00138611010010141377000000
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTCA.....................................................................................................................2211291.001291611280088784933072661445000
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTCC.....................................................................................................................2211287.001287713981712001035284541000
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTCTT....................................................................................................................2311095.00109516513300999684137542122347000
...........................................................................................................................................................................................................................................................................................................................GTGACTAGATTTCATGCTCGTCT.....................................................................................................................2311008.00100825942252102247542718135503475001
..................................................................................................................................................................................................................................................................................CGAACATGGATCTAGTGCACG................................................................................................................................................................211814.0081418059226281418505535332311874000
...............................................................................................................................................................................................................................................................................................................................CTAGATTTCATGCTCGTCT.....................................................................................................................191753.007533041220113310687000000
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTCTAAA..................................................................................................................251680.006800004009595211234260132000
................................................................................................................................................................................................................................................................................GGCGAACATGGATCTAGTGCA..................................................................................................................................................................211590.0059024318412241832234443181317000
................................................................................................................................................................................................................................................................................GGCGAACATGGATCTAGTGCAC.................................................................................................................................................................221570.0057087181462233756881261151420000
................................................................................................................................................................................................................................................................................................................................TAGATTTCATGCTCGTCTA....................................................................................................................191458.004581001000001455000000
...........................................................................................................................................................................................................................................................................................................................GTGACTAGATTTCATGCTCGT.......................................................................................................................211439.004396715362317974393680610000
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTCG.....................................................................................................................221435.0043514542771000333155204000
.............................................................................................................................................................................................................................................................................................................................GACTAGATTTCATGCTCGTCT.....................................................................................................................211373.00373532207243095124036000
.................................................................................................................................................................................................................................................................................GCGAACATGGATCTAGTGC...................................................................................................................................................................191359.00359146297514024865554110000
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTCTAT...................................................................................................................241324.003240008178243147511192107000
.................................................................................................................................................................................................................................................................................................................................AGATTTCATGCTCGTC......................................................................................................................161279.002790000000023274000000
..............................................................................................................................................................................................................................................................................................................................ACTAGATTTCATGCTCGTCT.....................................................................................................................201274.002741071438009131220147400000
.................................................................................................................................................................................................................................................................................GCGAACATGGATCTAGTG....................................................................................................................................................................181272.00272210185155340219000000
..................................................................................................................................................................................................................................................................................................................................GATTTCATGCTCGTCT.....................................................................................................................162262.005240000003726504020000
...................................................................................................................................................................................................................................................................................................................................ATTTCATGCTCGTCTA....................................................................................................................161240.002400000000001239000000
...........................................................................................................................................................................................................................................................................................................................GTGACTAGATTTCATGCTCGTT......................................................................................................................221237.002373440001006630167124000
...............................................................................................................................................................................................................................................................................................................................CTAGATTTCATGCTCGTCTA....................................................................................................................201233.002330023000203223000000
..................................................................................................................................................................................................................................................................................................................................GATTTCATGCTCGTCTA....................................................................................................................171229.002290000001102225000000
.................................................................................................................................................................................................................................................................................GCGAACATGGATCTAGTGCACGT...............................................................................................................................................................231208.002081533600246539011114000
...................................................................................................................................................................................................................................................................................................................................ATTTCATGCTCGTCT.....................................................................................................................152205.504110000001307400000000
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTCTC....................................................................................................................231178.001781215200481714105910000
.................................................................................................................................................................................................................................................................................................................................AGATTTCATGCTCGT.......................................................................................................................151155.001550000000000155000000
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTT......................................................................................................................211145.0014538101001503330261000
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTCTG....................................................................................................................231145.0014561210011177397000000
.................................................................................................................................................................................................................................................................................GCGAACATGGATCTAGTGCACGGT-.............................................................................................................................................................241134.00134623132214061731425000
..................................................................................................................................................................................................................................................................................CGAACATGGATCTAGTGCAC.................................................................................................................................................................201130.001302171928241312691008000
.................................................................................................................................................................................................................................................................................GCGAACATGGATCTAGTGCACGA...............................................................................................................................................................231124.00124211500261381071743000
...................................................................................................................................................................................................................................................................................GAACATGGATCTAGTGCACG................................................................................................................................................................201114.00114131011202130068211000
................................................................................................................................................................................................................................................................................................................................TAGATTTCATGCTCGTC......................................................................................................................171113.001130000000011111000000
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCT........................................................................................................................191109.001092035300101171004000
....................................................................................................................................................................................................................................................................................AACATGGATCTAGTGCACG................................................................................................................................................................19196.0096232001000088000000
.................................................................................................................................................................................................................................................................................GCGAACATGGATCTAGT.....................................................................................................................................................................17195.0095000000320090000000
...........................................................................................................................................................................................................................................................................................................................GTGACTAGATTTCATGCTCGTCC.....................................................................................................................23187.00874663100000001102000
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTA......................................................................................................................21186.0086310100431814161124000
..............................................................................................................................................................................................................................................................................................................................ACTAGATTTCATGCTCGTCTA....................................................................................................................21186.0086001300144268300000
.....................................................................................................................................................................................................................................................................................ACATGGATCTAGTGCACG................................................................................................................................................................18178.0078324000000069000000
................................................................................................................................................................................................................................................................................................................................TAGATTTCATGCTCGT.......................................................................................................................16177.0077000000000077000000
................................................................................................................................................................................................................................................................................GGCGAACATGGATCTAGT.....................................................................................................................................................................18174.007400002528000021000000
.............................................................................................................................................................................................................................................................................................................................GACTAGATTTCATGCTCGTCTA....................................................................................................................22173.00730003900335122000000
................................................................................................................................................................................................................................................................................GGCGAACATGGATCTAGTGC...................................................................................................................................................................20170.007022710107900181400000
.......................................................................................................................................................................................................................................................................................ATGGATCTAGTGCACG................................................................................................................................................................16158.0058000000000058000000
.......................................................................................................................................................................................................................................................................................................GT-GGTTCATGATTAAGTTCG...........................................................................................................................................20157.00571110100010563101000
.............................................................................................................................................................................................................................................................................................................................GACTAGATTTCATGCTCGTC......................................................................................................................20155.00552103612000110101000
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTCTAC...................................................................................................................24152.00522031007141023001000
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTCTAG...................................................................................................................24149.0049004100764520110000
...............................................................................................................................................................................................................................................................................................................................CTAGATTTCATGCTCGTC......................................................................................................................18147.00471033000000031000000
.............................................................................................................................................................................................................................................................................................................................GACTAGATTTCATGCTCGT.......................................................................................................................19143.00438011900000013200000
...............................................................................................................................................................................................................................................................................CGGCGAACATGGATCTAGTGCACG................................................................................................................................................................24142.004242810026004573000
.................................................................................................................................................................................................................................................................................GCGAACATGGATCTAGTGCACA................................................................................................................................................................22142.0042532000104216054000
...............................................................................................................................................................................................................................................................................................................................CTAGATTTCATGCTCGT.......................................................................................................................17141.0041000000000041000000
.................................................................................................................................................................................................................................................................................GCGAACATGGATCTAGTGCAA.................................................................................................................................................................21140.0040000000226630120000
..................................................................................................................................................................................................................................................................................CGAACATGGATCTAGTGCA..................................................................................................................................................................19139.0039913151212202001000
................................................................................................................................................................................................................................................................................GGCGAACATGGATCTAGTGCACGG...............................................................................................................................................................24138.00380010010100211220000
.................................................................................................................................................................................................................................................................................GCGAACATGGATCTAGTGCACT................................................................................................................................................................22137.0037116500013016004000
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGA.......................................................................................................................20136.0036831000110019003000
.................................................................................................................................................................................................................................................................................................................................AGATTTCATGCTCGTCTAA...................................................................................................................19133.0033100000001229000000
.................................................................................................................................................................................................................................................................................GCGAACATGGATCTAGTGCACGGA-.............................................................................................................................................................24133.0033211000412601042000
..................................................................................................................................................................................................................................................................................CGAACATGGATCTAGTGCACGT...............................................................................................................................................................22130.003000500002660038000
................................................................................................................................................................................................................................................................................GGCGAACATGGATCTAGTGCACGA...............................................................................................................................................................24128.0028003000911012011000
..................................................................................................................................................................................................................................................................................CGAACATGGATCTAGTGCACGGT-.............................................................................................................................................................23127.0027113000104210023000
.................................................................................................................................................................................................................................................................................GCGAACATGGATCTAGTGCAT.................................................................................................................................................................21126.0026000000102020021000
...........................................................................................................................................................................................................................................................................................................................GTGACTAGATTTCATGCTCGTCTA....................................................................................................................24126.0026214100211311000000
................................................................................................................................................................................................................................................................................GGCGAACATGGATCTAGTGCACGT...............................................................................................................................................................24125.0025301100011113013000
........................................................................................................................................................................................................................................................................................................................TTCGTGACTAGATTTCATGCTCGTCT.....................................................................................................................26124.0024154000012002000000
...................................................................................................................................................................................................................................................................................GAACATGGATCTAGTGCAC.................................................................................................................................................................19123.0023020011123013000000
..............................................................................................................................................................................................................................................................................................................................ACTAGATTTCATGCTCGT.......................................................................................................................18123.002346121000018000000
....................................................................................................................................................................................................................................................................................................................................TTTCATGCTCGTCTA....................................................................................................................15223.0046000000100243000000
...........................................................................................................................................................................................................................................................................................................................GTGACTAGATTTCATGCTCGTCG.....................................................................................................................23121.0021821000000000001000
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTCTACA..................................................................................................................25121.002100020044740000000
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTTA.....................................................................................................................22121.002120000023324023000
.................................................................................................................................................................................................................................................................................GCGAACATGGATCTAGTGCACGC...............................................................................................................................................................23120.0020200000001030014000
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTAA.....................................................................................................................22120.002001010011215035000
...............................................................................................................................................................................................................................................................................CGGCGAACATGGATCTAGTGCAC.................................................................................................................................................................23119.001950200035001021000
...........................................................................................................................................................................................................................................................................................................................GTGACTAGATTTCATGCTCGG.......................................................................................................................21119.001991700000002000000
..............................................................................................................................................................................................................................................................................................................................ACTAGATTTCATGCTCGTC......................................................................................................................19119.001980020000008100000
...................................................................................................................................................................................................................................................................................GAACATGGATCTAGTGCACGG...............................................................................................................................................................21118.001810330027100010000
..................................................................................................................................................................................................................................................................................CGAACATGGATCTAGTGCACGGA-.............................................................................................................................................................23118.001841400012201111000
...........................................................................................................................................................................................................................................................................................................................GTGACTAGATTTCATGCTC.........................................................................................................................19118.0018000051100002000000
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCTCT......................................................................................................................21317.00514012000212425010000
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTCTATA..................................................................................................................25116.001600010014640000000
................................................................................................................................................................................................................................................................................GGCGAACATGGATCTAGTGCACT................................................................................................................................................................23116.001620700031000102000
................................................................................................................................................................................................................................................................................GGCGAACATGGATCTAGTGCACA................................................................................................................................................................23116.001621410010103003000
...................................................................................................................................................................................................................................................................................................................................ATTTCATGCTCGTCTAA...................................................................................................................17115.0015000000000015000000
.................................................................................................................................................................................................................................................................................GCGAACATGGATCTAGTGCACGGT-T............................................................................................................................................................25115.001500100036002003000
droSec2
GGCAATAATCATCATC---------------------------CG----------------------------------------------GGCGAGAAAGAAGCC----C-AAA-----------------------------------------------------AG-TGGGGATGTGGGGAAGGA----------------------------------------------------------TGCTCTTTTCTGACTCTATTTTGTCGGCGAACATGGATCTAGTGCACGGT-GGTTCATGATTAAGTTCGTGACTAGATTTCATGCTCGTCTATTAAGTTGGGTCAGCACAA----CGA----------AGAGAGC-------------------------------G--GAG------------------------------------SizeHit CountTotal NormTotalM054

Female-body
V113

Male-body
V114

Embryo
V115

Head
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTCT.....................................................................................................................22134073.0034073119483215102708640
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGT.......................................................................................................................20118514.001851410936027103810356
.................................................................................................................................................................................................................................................................................GCGAACATGGATCTAGTGCACG................................................................................................................................................................22113148.0013148248550788304755
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTCTA....................................................................................................................23110282.0010282321849544762093
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTC......................................................................................................................2116391.006391210312968802112
................................................................................................................................................................................................................................................................................GGCGAACATGGATCTAGTGCACG................................................................................................................................................................2312074.002074440418824392
.............................................................................................................................................................................................................................................................................................................................GACTAGATTTCATGCTCGTCT.....................................................................................................................211833.00833826124
.................................................................................................................................................................................................................................................................................GCGAACATGGATCTAGTGCAC.................................................................................................................................................................211783.0078328630233162
..............................................................................................................................................................................................................................................................................................................................ACTAGATTTCATGCTCGTCT.....................................................................................................................201554.005543291773315
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCG........................................................................................................................191506.005063442132109
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTCTT....................................................................................................................231480.004802475125157
.................................................................................................................................................................................................................................................................................GCGAACATGGATCTAGTGCA..................................................................................................................................................................201308.00308122952764
.................................................................................................................................................................................................................................................................................GCGAACATGGATCTAGTGCACGG...............................................................................................................................................................231273.0027369757752
..................................................................................................................................................................................................................................................................................CGAACATGGATCTAGTGCACG................................................................................................................................................................211249.0024919825188
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTCA.....................................................................................................................221233.002337994798
...........................................................................................................................................................................................................................................................................................................................GTGACTAGATTTCATGCTCGTCT.....................................................................................................................231227.00227332111558
..................................................................................................................................................................................................................................................................................CGAACATGGATCTAGTGCACGG...............................................................................................................................................................221222.0022281594537
.............................................................................................................................................................................................................................................................................................................................GACTAGATTTCATGCTCGTCTA....................................................................................................................221202.00202198031
.............................................................................................................................................................................................................................................................................................................................GACTAGATTTCATGCTCGTC......................................................................................................................201145.00145143101
.................................................................................................................................................................................................................................................................................GCGAACATGGATCTAGTGC...................................................................................................................................................................191143.0014321610106
.................................................................................................................................................................................................................................................................................GCGAACATGGATCTAGTGCACGT...............................................................................................................................................................231137.001375352527
...........................................................................................................................................................................................................................................................................................................................GTGACTAGATTTCATGCTCGTC......................................................................................................................221121.0012123174635
................................................................................................................................................................................................................................................................................GGCGAACATGGATCTAGTGCAC.................................................................................................................................................................221113.0011351153215
...........................................................................................................................................................................................................................................................................................................................GTGACTAGATTTCATGCTCGT.......................................................................................................................211102.0010213341639
................................................................................................................................................................................................................................................................................GGCGAACATGGATCTAGTGCA..................................................................................................................................................................211101.0010130124118
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTCTAA...................................................................................................................24195.0095730184
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTCTAT...................................................................................................................24187.0087600216
.............................................................................................................................................................................................................................................................................................................................GACTAGATTTCATGCTCGT.......................................................................................................................19178.007870017
..............................................................................................................................................................................................................................................................................................................................ACTAGATTTCATGCTCGTCTA....................................................................................................................21178.0078353562
.......................................................................................................................................................................................................................................................................................................GT-GGTTCATGATTAAGTTCG...........................................................................................................................................20173.007344587
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCT........................................................................................................................19172.00723621321
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTT......................................................................................................................21169.00692118030
.................................................................................................................................................................................................................................................................................GCGAACATGGATCTAGTGCACGGT-.............................................................................................................................................................24156.0056663311
...............................................................................................................................................................................................................................................................................................................................CTAGATTTCATGCTCGTCT.....................................................................................................................19146.0046341101
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTCC.....................................................................................................................22142.00421641012
...................................................................................................................................................................................................................................................................................GAACATGGATCTAGTGCACG................................................................................................................................................................20140.0040159214
................................................................................................................................................................................................................................................................................GGCGAACATGGATCTAGTGC...................................................................................................................................................................20136.0036811413
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTC.........................................................................................................................18136.003650256
.................................................................................................................................................................................................................................................................................GCGAACATGGATCTAGTG....................................................................................................................................................................18130.003091020
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTCTC....................................................................................................................23129.002915239
..................................................................................................................................................................................................................................................................................CGAACATGGATCTAGTGCAC.................................................................................................................................................................20129.002918605
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGC.......................................................................................................................20128.002817317
.................................................................................................................................................................................................................................................................................GCGAACATGGATCTAGTGCACGA...............................................................................................................................................................23126.002616316
.................................................................................................................................................................................................................................................................................GCGAACATGGATCTAGTGCACT................................................................................................................................................................22125.002548211
................................................................................................................................................................................................................................................................................GGCGAACATGGATCTAGTGCACGT...............................................................................................................................................................24124.00244875
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGA.......................................................................................................................20124.002421120
.............................................................................................................................................................................................................................................................................................................................GACTAGATTTCATGCTCG........................................................................................................................18124.002424000
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTA......................................................................................................................21120.00207805
.................................................................................................................................................................................................................................................................................GCGAACATGGATCTAGTGT...................................................................................................................................................................19117.00171817
................................................................................................................................................................................................................................................................................GGCGAACATGGATCTAGTGCACGG...............................................................................................................................................................24117.001732111
..............................................................................................................................................................................................................................................................................................................................ACTAGATTTCATGCTCGTC......................................................................................................................19115.001513011
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTCTG....................................................................................................................23115.00157053
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCTA.......................................................................................................................20115.001510050
..................................................................................................................................................................................................................................................................................CGAACATGGATCTAGTGCACGGT-.............................................................................................................................................................23114.00142543
................................................................................................................................................................................................................................................................................................................................TAGATTTCATGCTCGTCT.....................................................................................................................18113.00134180
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGG.......................................................................................................................20113.00134207
.................................................................................................................................................................................................................................................................................GCGAACATGGATCTAGTGCACA................................................................................................................................................................22112.00124332
................................................................................................................................................................................................................................................................................GGCGAACATGGATCTAGTG....................................................................................................................................................................19112.00125106
...........................................................................................................................................................................................................................................................................................................................GTGACTAGATTTCATGCTCGTT......................................................................................................................22112.00122334
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCTCT......................................................................................................................21411.7547291710
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTCTAC...................................................................................................................24111.00118030
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTCTACA..................................................................................................................25111.001111000
..............................................................................................................................................................................................................................................................................................................................ACTAGATTTCATGCTCGTCTT....................................................................................................................21111.00116410
..................................................................................................................................................................................................................................................................................CGAACATGGATCTAGTGCA..................................................................................................................................................................19110.00109010
.................................................................................................................................................................................................................................................................................GCGAACATGGATCTAGTGCACGGT-T............................................................................................................................................................25110.00102341
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTCTAG...................................................................................................................2419.0095022
.............................................................................................................................................................................................................................................................................................................................GACTAGATTTCATGCTCGTCG.....................................................................................................................2119.0099000
.................................................................................................................................................................................................................................................................................GCGAACATGGATCTAGTGCACC................................................................................................................................................................2219.0091512
.............................................................................................................................................................................................................................................................................................................................GACTAGATTTCATGCTCGTCTT....................................................................................................................2219.0099000
..................................................................................................................................................................................................................................................................................CGAACATGGATCTAGTGCACGT...............................................................................................................................................................2218.0083104
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTCG.....................................................................................................................2218.0084121
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTAA.....................................................................................................................2217.0071402
...............................................................................................................................................................................................................................................................................CGGCGAACATGGATCTAGTGCACG................................................................................................................................................................2417.0070142
...........................................................................................................................................................................................................................................................................................................................GTGACTAGATTTCATGCTCG........................................................................................................................2017.0071024
.............................................................................................................................................................................................................................................................................................................................GACTAGATTTCATGCTCGTCA.....................................................................................................................2117.0077000
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTTA.....................................................................................................................2217.0071213
.................................................................................................................................................................................................................................................................................GCGAACATGGATCTAGTGCACGGA-.............................................................................................................................................................2416.0060015
..............................................................................................................................................................................................................................................................................................................................ACTAGATTTCATGCTCGT.......................................................................................................................1816.0061023
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTCTAAA..................................................................................................................2516.0065010
................................................................................................................................................................................................................................................................................GGCGAACATGGATCTAGT.....................................................................................................................................................................1816.0061041
.................................................................................................................................................................................................................................................................................GCGAACATGGATCTAGTGTT..................................................................................................................................................................2016.0060303
...........................................................................................................................................................................................................................................................................................................................GTGACTAGATTTCATGCTCGTCTA....................................................................................................................2415.0055000
.............................................................................................................................................................................................................................................................................................................................GACTAGATTTCATGCTCGTCTAT...................................................................................................................2315.0055000
.................................................................................................................................................................................................................................................................................GCGAACATGGATCTAGTGCACGC...............................................................................................................................................................2315.0051121
................................................................................................................................................................................................................................................................................GGCGAACATGGATCTAGTGCACGGT-.............................................................................................................................................................2515.0051121
..............................................................................................................................................................................................................................................................................................................................ACTAGATTTCATGCTCGTCTAT...................................................................................................................2215.0053110
droYak3
GGCAATAATCATCATC---------------------------CG----------------------------------------------AGCGAGAAAGGAGCC----CCAAATGTG--------------------------------------------------G-GGGGGATGTGGGGAAGGA----------------------------------------------------------TGCTCTTTTCTGACTCTATTTTGTCGGCGAACATGGATCTAGTGCACGGT-GGTTCATGATTAAGTTCGTGACTAGATTTCATGCTCGTCTATTAAGTTGGGTCAGCACTA----CGA----------AGAGAGCTTTCCATCTCGCGGGGATC------------G--GAG-------GGAG--T-----------TCGTT------SizeHit CountTotal NormTotalM026

Head
M043

Female-body
M056

Embryo
V046

Embryo
V052

Head
V058

Head
V120

Male-body
SRR1275488

Male larvae
SRR1275486

Male prepupae
SRR1275484

Male prepupae
GSM1528802

follicle cells
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTCT.....................................................................................................................22119814.0019814394542232499483401577361100115
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGT.......................................................................................................................2017712.00771233736631052726451033155910259
.................................................................................................................................................................................................................................................................................GCGAACATGGATCTAGTGCACG................................................................................................................................................................2215385.0053854691133119641023747214602060
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTCTA....................................................................................................................2314758.0047581820414151105456625940022
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTC......................................................................................................................2114125.00412552311245091476039752400004
................................................................................................................................................................................................................................................................................GGCGAACATGGATCTAGTGCACG................................................................................................................................................................2312050.0020501222751041387287111210130
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTCC.....................................................................................................................2211207.0012075231129181310000
.............................................................................................................................................................................................................................................................................................................................GACTAGATTTCATGCTCGTCT.....................................................................................................................211452.004520444302210000
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGG.......................................................................................................................201371.003713661040000000
................................................................................................................................................................................................................................................................................GGCGAACATGGATCTAGTGCAC.................................................................................................................................................................221325.00325111228593310010
.................................................................................................................................................................................................................................................................................GCGAACATGGATCTAGTGCAC.................................................................................................................................................................211312.003122772171771770040
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTCTT....................................................................................................................231261.00261191776677120000
..............................................................................................................................................................................................................................................................................................................................ACTAGATTTCATGCTCGTCT.....................................................................................................................201259.002592941406101330000
.................................................................................................................................................................................................................................................................................GCGAACATGGATCTAGTGCACGG...............................................................................................................................................................231226.0022610421193024160030
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCG........................................................................................................................191211.002111992801739351000
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGC.......................................................................................................................201184.0018415002601340000
.............................................................................................................................................................................................................................................................................................................................GACTAGATTTCATGCTCGTCTA....................................................................................................................221141.001410140010000000
...........................................................................................................................................................................................................................................................................................................................GTGACTAGATTTCATGCTCGTCT.....................................................................................................................231138.001385118103741080000
.......................................................................................................................................................................................................................................................................................................GT-GGTTCATGATTAAGTTCG...........................................................................................................................................201117.0011701579200030000
..................................................................................................................................................................................................................................................................................CGAACATGGATCTAGTGCACG................................................................................................................................................................211117.001171687723110000
................................................................................................................................................................................................................................................................................GGCGAACATGGATCTAGTGCA..................................................................................................................................................................211101.0010111250283510010
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCT........................................................................................................................19199.0099009801000000
.............................................................................................................................................................................................................................................................................................................................GACTAGATTTCATGCTCGTC......................................................................................................................20196.0096096000000000
.................................................................................................................................................................................................................................................................................GCGAACATGGATCTAGTGCA..................................................................................................................................................................20196.009664412784130020
...........................................................................................................................................................................................................................................................................................................................GTGACTAGATTTCATGCTCGTC......................................................................................................................22196.00965491057650000
................................................................................................................................................................................................................................................................................GGCGAACATGGATCTAGTGC...................................................................................................................................................................20187.00871659190200000
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTCA.....................................................................................................................22173.007303614731210000
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTCTAA...................................................................................................................24162.00620421170200000
.................................................................................................................................................................................................................................................................................GCGAACATGGATCTAGTGCACGGT-.............................................................................................................................................................24159.0059472770390011
..............................................................................................................................................................................................................................................................................................................................ACTAGATTTCATGCTCGTCTA....................................................................................................................21153.00530241022240000
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTCTAT...................................................................................................................24153.0053033852500000
..................................................................................................................................................................................................................................................................................CGAACATGGATCTAGTGCACGG...............................................................................................................................................................22152.0052972361330000
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTT......................................................................................................................21151.00514900102620000
.................................................................................................................................................................................................................................................................................GCGAACATGGATCTAGTGCACGT...............................................................................................................................................................23151.00511219321120020
.............................................................................................................................................................................................................................................................................................................................GACTAGATTTCATGCTCGT.......................................................................................................................19143.0043043000000000
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTCTC....................................................................................................................23138.0038174512000000
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCC........................................................................................................................19136.0036103500000000
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCTCT......................................................................................................................21132.0032013000010000
...................................................................................................................................................................................................................................................................................GAACATGGATCTAGTGCACG................................................................................................................................................................20131.0031171120190000
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTCG.....................................................................................................................22131.0031136004800000
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTC.........................................................................................................................18130.0030192710100000
.................................................................................................................................................................................................................................................................................GCGAACATGGATCTAGTGCACT................................................................................................................................................................22129.0029531401420000
...........................................................................................................................................................................................................................................................................................................................GTGACTAGATTTCATGCTCGT.......................................................................................................................21126.002692252420000
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTCTAG...................................................................................................................24126.0026318301100000
................................................................................................................................................................................................................................................................................GGCGAACATGGATCTAGTGCACT................................................................................................................................................................23122.0022121621000000
..................................................................................................................................................................................................................................................................................CGAACATGGATCTAGTGCAC.................................................................................................................................................................20121.002147610210000
.................................................................................................................................................................................................................................................................................GCGAACATGGATCTAGTGC...................................................................................................................................................................19120.0020051102110000
...............................................................................................................................................................................................................................................................................................................................CTAGATTTCATGCTCGTCT.....................................................................................................................19119.0019211210030000
.................................................................................................................................................................................................................................................................................GCGAACATGGATCTAGTG....................................................................................................................................................................18118.001809103500000
................................................................................................................................................................................................................................................................................GGCGAACATGGATCTAGTGCACC................................................................................................................................................................23117.0017201310010000
................................................................................................................................................................................................................................................................................GGCGAACATGGATCTAGTGCACGT...............................................................................................................................................................24115.0015021010110000
................................................................................................................................................................................................................................................................................GGCGAACATGGATCTAGTGCACGG...............................................................................................................................................................24115.001516800000000
.................................................................................................................................................................................................................................................................................GCGAACATGGATCTAGTGCACC................................................................................................................................................................22115.001521800220000
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTCTG....................................................................................................................23115.001537001220000
...............................................................................................................................................................................................................................................................................CGGCGAACATGGATCTAGTGCACG................................................................................................................................................................24114.001412710030000
..................................................................................................................................................................................................................................................................................CGAACATGGATCTAGTGCACGGT-.............................................................................................................................................................23113.0013001010200000
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCTA.......................................................................................................................20112.0012001200000000
.............................................................................................................................................................................................................................................................................................................................GACTAGATTTCATGCTCGTCTT....................................................................................................................22111.0011010100000000
.................................................................................................................................................................................................................................................................................GCGAACATGGATCTAGTGCACGGT-T............................................................................................................................................................25110.001001520200000
................................................................................................................................................................................................................................................................................................................................TAGATTTCATGCTCGTCT.....................................................................................................................18110.001023300110000
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTA......................................................................................................................2119.00904302000000
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTCTGG...................................................................................................................2419.00909000000000
.............................................................................................................................................................................................................................................................................................................................GACTAGATTTCATGCTCG........................................................................................................................1818.00808000000000
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTCTAC...................................................................................................................2418.00803311000000
..............................................................................................................................................................................................................................................................................................................................ACTAGATTTCATGCTCGTC......................................................................................................................1918.00807000010000
...........................................................................................................................................................................................................................................................................................................................GTGACTAGATTTCATGCTCGTCC.....................................................................................................................2318.00860200000000
..............................................................................................................................................................................................................................................................................................................................ACTAGATTTCATGCTCGTCC.....................................................................................................................2017.00730400000000
.................................................................................................................................................................................................................................................................................GCGAACATGGATCTAGTGCACGA...............................................................................................................................................................2317.00703300100000
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCTC.......................................................................................................................2017.00700700000000
.................................................................................................................................................................................................................................................................................GCGAACATGGATCTAGTGCACGGC-.............................................................................................................................................................2417.00700700000000
...............................................................................................................................................................................................................................................................................................................................CTAGATTTCATGCTCGTCTA....................................................................................................................2017.00714100010000
.................................................................................................................................................................................................................................................................................GCGAACATGGATCTAGTGCACA................................................................................................................................................................2217.00702200120000
................................................................................................................................................................................................................................................................................GGCGAACATGGATCTAGTGCACGGT-.............................................................................................................................................................2517.00711110120000
.................................................................................................................................................................................................................................................................................GCGAACATGGATCTAGTGT...................................................................................................................................................................1916.00604000020000
................................................................................................................................................................................................................................................................................GGCGAACATGGATCTAGTGCACA................................................................................................................................................................2316.00610310010000
...................................................................................................................................................................................................................................................................................GAACATGGATCTAGTGCACGG...............................................................................................................................................................2115.00513000010000
.................................................................................................................................................................................................................................................................................GCGAACATGGATCTAGTGCACGGT-GG...........................................................................................................................................................2615.00502110010000
..............................................................................................................................................................................................................................................................................................................................ACTAGATTTCATGCTCGTCTT....................................................................................................................2115.00501000040000
droEre2
GGCAATAATCATCATC---------------------------CG----------------------------------------------AGCGAGAAAGGAGCC----C-CAC-----------------------------------------------------AG-CGGAGAAGTGGGGAAGGA----------------------------------------------------------TGCTCTTTTCTGACTCTATTTTGTCGGCGAACATGGATCTAGTGCACGGT-GGTTCATGATTAAGTTCGTGACTAGATTTCATGCTCGTCTATTAAGTTGGGTCAGCACTA----CGA----------AGAGAGCTTTCCATCTCGCGGGGATCGGAACGGGATC-G--GAG-------GGA--------------------------SizeHit CountTotal NormTotalM055

Female-body
M057

Embryo
V060

Head
V040

Embryo
V107

Male-body
V108

Head
GSM1528801

follicle cells
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTCT.....................................................................................................................22128129.00281291443950434325532550661932
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGT.......................................................................................................................2018329.008329119811351180199345888
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTCTA....................................................................................................................2317696.0076963582544724874111866824
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTC......................................................................................................................2115867.005867303710551289747136710
.................................................................................................................................................................................................................................................................................GCGAACATGGATCTAGTGCACG................................................................................................................................................................2213824.003824925929416216369087
................................................................................................................................................................................................................................................................................GGCGAACATGGATCTAGTGCACG................................................................................................................................................................2311878.0018783481264618755454374
.............................................................................................................................................................................................................................................................................................................................GACTAGATTTCATGCTCGTCT.....................................................................................................................211997.00997985030270
..............................................................................................................................................................................................................................................................................................................................ACTAGATTTCATGCTCGTCT.....................................................................................................................201399.003992372041089390
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTCTT....................................................................................................................231322.003221410352228735
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCG........................................................................................................................191294.00294168017251560
.............................................................................................................................................................................................................................................................................................................................GACTAGATTTCATGCTCGTCTA....................................................................................................................221248.002482350101011
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTCA.....................................................................................................................221233.0023317626112360
...........................................................................................................................................................................................................................................................................................................................GTGACTAGATTTCATGCTCGTCT.....................................................................................................................231220.002204807262610013
.................................................................................................................................................................................................................................................................................GCGAACATGGATCTAGTGCACGG...............................................................................................................................................................231210.0021054814452474
.................................................................................................................................................................................................................................................................................GCGAACATGGATCTAGTGCA..................................................................................................................................................................201194.001945407091420
.............................................................................................................................................................................................................................................................................................................................GACTAGATTTCATGCTCGTC......................................................................................................................201188.00188184010120
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTCC.....................................................................................................................221181.001811914921280
.................................................................................................................................................................................................................................................................................GCGAACATGGATCTAGTGCAC.................................................................................................................................................................211157.0015773164236260
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTCTAT...................................................................................................................241132.001327308221433
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTCTAA...................................................................................................................241111.00111861200418
..................................................................................................................................................................................................................................................................................CGAACATGGATCTAGTGCACG................................................................................................................................................................21198.009880211590
...........................................................................................................................................................................................................................................................................................................................GTGACTAGATTTCATGCTCGTC......................................................................................................................22194.00942438630230
................................................................................................................................................................................................................................................................................GGCGAACATGGATCTAGTGCAC.................................................................................................................................................................22189.00891244158136
.............................................................................................................................................................................................................................................................................................................................GACTAGATTTCATGCTCGT.......................................................................................................................19183.008372000290
.................................................................................................................................................................................................................................................................................GCGAACATGGATCTAGTGC...................................................................................................................................................................19177.00771501012490
...........................................................................................................................................................................................................................................................................................................................GTGACTAGATTTCATGCTCGT.......................................................................................................................21172.0072608026320
................................................................................................................................................................................................................................................................................GGCGAACATGGATCTAGTGCA..................................................................................................................................................................21168.00689146710220
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCT........................................................................................................................19162.0062420003170
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTCTC....................................................................................................................23160.0060190751262
..............................................................................................................................................................................................................................................................................................................................ACTAGATTTCATGCTCGTCTA....................................................................................................................21158.0058341011570
.................................................................................................................................................................................................................................................................................GCGAACATGGATCTAGTGCACGT...............................................................................................................................................................23158.0058200103070
.................................................................................................................................................................................................................................................................................GCGAACATGGATCTAGTG....................................................................................................................................................................18149.0049100104340
................................................................................................................................................................................................................................................................................GGCGAACATGGATCTAGTGCACGT...............................................................................................................................................................24148.004820003736
..................................................................................................................................................................................................................................................................................CGAACATGGATCTAGTGCACGG...............................................................................................................................................................22148.00481720311132
.......................................................................................................................................................................................................................................................................................................GT-GGTTCATGATTAAGTTCG...........................................................................................................................................20147.00471041711140
...............................................................................................................................................................................................................................................................................................................................CTAGATTTCATGCTCGTCT.....................................................................................................................19143.0043240001090
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCTCT......................................................................................................................21140.004030100450
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTCTG....................................................................................................................23132.0032150010151
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTC.........................................................................................................................18128.0028121010140
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTT......................................................................................................................21125.00256081370
................................................................................................................................................................................................................................................................................GGCGAACATGGATCTAGTGC...................................................................................................................................................................20124.002425011060
.................................................................................................................................................................................................................................................................................GCGAACATGGATCTAGTGCACGGT-.............................................................................................................................................................24122.002250201230
.................................................................................................................................................................................................................................................................................GCGAACATGGATCTAGTGT...................................................................................................................................................................19121.002120001360
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTG......................................................................................................................21119.001918000010
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGC.......................................................................................................................20119.00191411390
..................................................................................................................................................................................................................................................................................................................................GATTTCATGCTCGTCTA....................................................................................................................17118.001800000018
................................................................................................................................................................................................................................................................................GGCGAACATGGATCTAGTGCACT................................................................................................................................................................23118.001821020121
..............................................................................................................................................................................................................................................................................................................................ACTAGATTTCATGCTCGTC......................................................................................................................19117.001711200310
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTCTAG...................................................................................................................24117.001714200010
.............................................................................................................................................................................................................................................................................................................................GACTAGATTTCATGCTCGTCTT....................................................................................................................22116.001614000020
.................................................................................................................................................................................................................................................................................GCGAACATGGATCTAGTGCACT................................................................................................................................................................22115.00150021390
...............................................................................................................................................................................................................................................................................................................................CTAGATTTCATGCTCGTCTA....................................................................................................................20115.00158001303
...................................................................................................................................................................................................................................................................................GAACATGGATCTAGTGCACG................................................................................................................................................................20115.00157002420
................................................................................................................................................................................................................................................................................................................................TAGATTTCATGCTCGTCT.....................................................................................................................18113.00133300160
..................................................................................................................................................................................................................................................................................CGAACATGGATCTAGTGCAC.................................................................................................................................................................20113.00138000050
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTCTAAA..................................................................................................................25113.001313000000
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGG.......................................................................................................................20113.00136102130
................................................................................................................................................................................................................................................................................GGCGAACATGGATCTAGTGCACGG...............................................................................................................................................................24112.00125100510
...............................................................................................................................................................................................................................................................................CGGCGAACATGGATCTAGTGCACG................................................................................................................................................................24112.00122202330
.............................................................................................................................................................................................................................................................................................................................GACTAGATTTCATGCTCGTCTAT...................................................................................................................23111.001110000100
................................................................................................................................................................................................................................................................................GGCGAACATGGATCTAGTGCACC................................................................................................................................................................23111.00110201080
.............................................................................................................................................................................................................................................................................................................................GACTAGATTTCATGCTCG........................................................................................................................18110.00109000010
.................................................................................................................................................................................................................................................................................GCGAACATGGATCTAGTGCACGGT-T............................................................................................................................................................25110.00102010340
................................................................................................................................................................................................................................................................................................................................TAGATTTCATGCTCGTCTA....................................................................................................................19110.00104000114
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTCTATT..................................................................................................................25110.001010000000
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCTA.......................................................................................................................20110.00106001030
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTT.........................................................................................................................1819.0090000090
................................................................................................................................................................................................................................................................................GGCGAACATGGATCTAGTGCACA................................................................................................................................................................2319.0090000360
.............................................................................................................................................................................................................................................................................................................................GACTAGATTTCATGCTCGTCA.....................................................................................................................2119.0099000000
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTCTAC...................................................................................................................2419.0097002000
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTCG.....................................................................................................................2218.0086020000
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTA......................................................................................................................2118.0085000030
.................................................................................................................................................................................................................................................................................GCGAACATGGATCTAGTGCACA................................................................................................................................................................2218.0080010520
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTCTACA..................................................................................................................2518.0088000000
.................................................................................................................................................................................................................................................................................GCGAACATGGATCTAGTGCACGA...............................................................................................................................................................2317.0072000104
...........................................................................................................................................................................................................................................................................................................................GTGACTAGATTTCATGCTCGTT......................................................................................................................2217.0070001150
.............................................................................................................................................................................................................................................................................................................................GACTAGATTTCATGCTCGTCG.....................................................................................................................2117.0077000000
..................................................................................................................................................................................................................................................................................................................................GATTTCATGCTCGTCTC....................................................................................................................1716.0060000006
..................................................................................................................................................................................................................................................................................CGAACATGGATCTAGTGCACGGT-.............................................................................................................................................................2316.0061101120
.............................................................................................................................................................................................................................................................................................................................GACTAGATTTCATGCTCGTCTAA...................................................................................................................2316.0066000000
..............................................................................................................................................................................................................................................................................................................................ACTAGATTTCATGCTCGTCTT....................................................................................................................2116.0063000210
..............................................................................................................................................................................................................................................................................................................................ACTAGATTTCATGCTCGT.......................................................................................................................1815.0052100110
...............................................................................................................................................................................................................................................................................................................................CTAGATTTCATGCTCGTC......................................................................................................................1815.0055000000
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTCTGG...................................................................................................................2415.0055000000
...................................................................................................................................................................................................................................................................................GAACATGGATCTAGTGCACGG...............................................................................................................................................................2114.0044000000
................................................................................................................................................................................................................................................................................GGCGAACATGGATCTAGTGCACGGT-.............................................................................................................................................................2514.0043000010
...........................................................................................................................................................................................................................................................................................................................GTGACTAGATTTCATGCTCG........................................................................................................................2014.0042010100
..................................................................................................................................................................................................................................................................................CGAACATGGATCTAGTGCA..................................................................................................................................................................1914.0042010100
dp5
GGCAATAATCATCATT---------------------------TG----------------------------------------------GAGGAGGAA----------------------------------------------------------------------------------GAAAGGATGGACCCCGTAACAGTGCCAGAGCCAGAGCCAGAGCCTGGGTCTGATCCGGCAGCGTTTGCTCTTCTCTGACTCTATTTTGTCGGCGAACATGGATCTAGTGCACGGT-TGTTCATGATTAAGTTCGTGACTAGATTTCATGCTCGTCTATTAAGTTGGGTCAACACAA----CGA-ACCGAAAGAGC------------------------------------A--GAGCAAC-------------G-------CAGTTGTCGAASizeHit CountTotal NormTotalM022

Male-body
M040

Female-body
M059

Embryo
M062

Head
V043

Embryo
V051

Head
V112

Male-body
SRR902010

Ovary
SRR902011

Testis
SRR902012

CNS imaginal disc
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTCT.....................................................................................................................22124998.00249984413800907239165861201262287572109
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTC......................................................................................................................21110004.001000470648039111643513059267317335
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGT.......................................................................................................................2018942.00894217343806641787848259132204
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTCTA....................................................................................................................2317330.00733004430135181471873229796827
................................................................................................................................................................................................................................................................................GGCGAACATGGATCTAGTGCACG................................................................................................................................................................2313038.0030381416823122051790391525
.................................................................................................................................................................................................................................................................................GCGAACATGGATCTAGTGCACG................................................................................................................................................................2212967.002967251722182154131134762118
.............................................................................................................................................................................................................................................................................................................................GACTAGATTTCATGCTCGTCT.....................................................................................................................2111045.0010450103610131021
.................................................................................................................................................................................................................................................................................GCGAACATGGATCTAGTGCAC.................................................................................................................................................................2111008.001008128046041193032181
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTCA.....................................................................................................................221544.0054404618242848110
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCG........................................................................................................................191521.005212389353157164140
.............................................................................................................................................................................................................................................................................................................................GACTAGATTTCATGCTCGTC......................................................................................................................201495.00495049300020000
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTCTT....................................................................................................................231446.004460307641381131192
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTCC.....................................................................................................................221380.0038031727278082000
.............................................................................................................................................................................................................................................................................................................................GACTAGATTTCATGCTCGTCTA....................................................................................................................221378.00378037610010000
.............................................................................................................................................................................................................................................................................................................................GACTAGATTTCATGCTCGT.......................................................................................................................191372.00372136900100100
................................................................................................................................................................................................................................................................................GGCGAACATGGATCTAGTGCAC.................................................................................................................................................................221330.003303192821121213015
.................................................................................................................................................................................................................................................................................GCGAACATGGATCTAGTGCA..................................................................................................................................................................201316.0031632435382230020
................................................................................................................................................................................................................................................................................GGCGAACATGGATCTAGTGCA..................................................................................................................................................................211250.00250015523344619000
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTCTAA...................................................................................................................241114.001140841011120501
..................................................................................................................................................................................................................................................................................CGAACATGGATCTAGTGCACG................................................................................................................................................................211112.00112010820200000
................................................................................................................................................................................................................................................................................GGCGAACATGGATCTAGTGC...................................................................................................................................................................20196.00960521312410113
.................................................................................................................................................................................................................................................................................GCGAACATGGATCTAGTGC...................................................................................................................................................................19195.009508821120001
..............................................................................................................................................................................................................................................................................................................................ACTAGATTTCATGCTCGTCT.....................................................................................................................20195.009508440115000
.................................................................................................................................................................................................................................................................................GCGAACATGGATCTAGTGCACGT...............................................................................................................................................................23190.009007540115040
.................................................................................................................................................................................................................................................................................GCGAACATGGATCTAGTGCACGG...............................................................................................................................................................23190.009025191716247
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTT......................................................................................................................21187.00871490012511000
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTCTAT...................................................................................................................24171.007105010452540
..................................................................................................................................................................................................................................................................................CGAACATGGATCTAGTGCAC.................................................................................................................................................................20160.006006000000000
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTCTC....................................................................................................................23155.005513440753010
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGC.......................................................................................................................20147.0047512013224000
...........................................................................................................................................................................................................................................................................................................................GTGACTAGATTTCATGCTCGTCT.....................................................................................................................23144.0044022301441000
.................................................................................................................................................................................................................................................................................GCGAACATGGATCTAGTGT...................................................................................................................................................................19142.004203501024000
..............................................................................................................................................................................................................................................................................................................................ACTAGATTTCATGCTCGTCTA....................................................................................................................21136.003603400101000
.................................................................................................................................................................................................................................................................................GCGAACATGGATCTAGTG....................................................................................................................................................................18135.003503310010000
.............................................................................................................................................................................................................................................................................................................................GACTAGATTTCATGCTCGTCA.....................................................................................................................21131.003103100000000
................................................................................................................................................................................................................................................................................GGCGAACATGGATCTAGTGCACGT...............................................................................................................................................................24130.003001730207100
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTCTAAA..................................................................................................................25129.002902700000101
..................................................................................................................................................................................................................................................................................CGAACATGGATCTAGTGCACGG...............................................................................................................................................................22128.002801110303073
...........................................................................................................................................................................................................................................................................................................................GTGACTAGATTTCATGCTCGTC......................................................................................................................22128.002802110240000
.............................................................................................................................................................................................................................................................................................................................GACTAGATTTCATGCTCG........................................................................................................................18127.002702700000000
.......................................................................................................................................................................................................................................................................................................GT-TGTTCATGATTAAGTTCG...........................................................................................................................................20127.002702110410000
.............................................................................................................................................................................................................................................................................................................................GACTAGATTTCATGCTCGTCTT....................................................................................................................22126.002602600000000
................................................................................................................................................................................................................................................................................................................................TAGATTTCATGCTCGTCT.....................................................................................................................18125.002501900100302
...............................................................................................................................................................................................................................................................................................................................CTAGATTTCATGCTCGTCT.....................................................................................................................19122.002201800010201
.................................................................................................................................................................................................................................................................................GCGAACATGGATCTAGTGCACGGT-.............................................................................................................................................................24119.00190630203032
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTA......................................................................................................................21117.00170800350010
.................................................................................................................................................................................................................................................................................GCGAACATGGATCTAGTGTT..................................................................................................................................................................20117.001701000007000
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTC.........................................................................................................................18117.00173411430100
..............................................................................................................................................................................................................................................................................................................................ACTAGATTTCATGCTCGTC......................................................................................................................19117.001701500020000
.................................................................................................................................................................................................................................................................................GCGAACATGGATCTAGTGCACGA...............................................................................................................................................................23117.001701520000000
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTCTG....................................................................................................................23116.001601310200000
................................................................................................................................................................................................................................................................................GGCGAACATGGATCTAGTG....................................................................................................................................................................19115.001501200010002
...........................................................................................................................................................................................................................................................................................................................GTGACTAGATTTCATGCTCGT.......................................................................................................................21114.00140700223000
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTCTAG...................................................................................................................24114.001401110200000
................................................................................................................................................................................................................................................................................GGCGAACATGGATCTAGTGCACT................................................................................................................................................................23114.00140940100000
..............................................................................................................................................................................................................................................................................................................................ACTAGATTTCATGCTCGT.......................................................................................................................18113.001301300000000
...................................................................................................................................................................................................................................................................................GAACATGGATCTAGTGCACG................................................................................................................................................................20112.00120910101000
..................................................................................................................................................................................................................................................................................CGAACATGGATCTAGTGCA..................................................................................................................................................................19111.001101100000000
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTCTAC...................................................................................................................24110.00100510310000
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGG.......................................................................................................................20110.00105100121000
...............................................................................................................................................................................................................................................................................................................................CTAGATTTCATGCTCGTCTA....................................................................................................................2019.0090800001000
................................................................................................................................................................................................................................................................................GGCGAACATGGATCTAGTGCACA................................................................................................................................................................2319.0090230202000
.................................................................................................................................................................................................................................................................................................................................AGATTTCATGCTCGTCT.....................................................................................................................1718.0080000000440
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTCG.....................................................................................................................2218.0080110330000
................................................................................................................................................................................................................................................................................GGCGAACATGGATCTAGTGCACGG...............................................................................................................................................................2418.0080700010000
..................................................................................................................................................................................................................................................................................CGAACATGGATCTAGTGCACGT...............................................................................................................................................................2218.0080800000000
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTCTATT..................................................................................................................2517.0070700000000
................................................................................................................................................................................................................................................................................GGCGAACATGGATCTAGTGCACGA...............................................................................................................................................................2417.0071410100000
.................................................................................................................................................................................................................................................................................GCGAACATGGATCTAGTGCACT................................................................................................................................................................2217.0070610000000
...............................................................................................................................................................................................................................................................................CGGCGAACATGGATCTAGTGCACG................................................................................................................................................................2417.0070320101000
.................................................................................................................................................................................................................................................................................GCGAACATGGATCTAGTGCACC................................................................................................................................................................2217.0070140101000
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTAA.....................................................................................................................2216.0060500100000
.................................................................................................................................................................................................................................................................................................................................AGATTTCATGCTCGTCTA....................................................................................................................1816.0060600000000
.................................................................................................................................................................................................................................................................................GCGAACATGGATCTAGTGCACGC...............................................................................................................................................................2316.0060410001000
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGA.......................................................................................................................2016.0060410001000
................................................................................................................................................................................................................................................................................GGCGAACATGGATCTAGTGCACC................................................................................................................................................................2316.0060040200000
..................................................................................................................................................................................................................................................................................CGAACATGGATCTAGTGC...................................................................................................................................................................1816.0060600000000
................................................................................................................................................................................................................................................................................GGCGAACATGGATCTAGTGCACGGT-.............................................................................................................................................................2516.0060600000000
.................................................................................................................................................................................................................................................................................GCGAACATGGATCTAGTGCACGGT-T............................................................................................................................................................2515.0050300000011
.................................................................................................................................................................................................................................................................................GCGAACATGGATCTAGTGCACA................................................................................................................................................................2215.0050500000000
...............................................................................................................................................................................................................................................................................................................................CTAGATTTCATGCTCGTC......................................................................................................................1815.0050500000000
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTTT........................................................................................................................1925.00100701020000
...................................................................................................................................................................................................................................................................................................................................................TTAAGTTGGGTCAACACAA----CGA-ACC......................................................................................2515.0050111000200
...................................................................................................................................................................................................................................................................................GAACATGGATCTAGTGCAC.................................................................................................................................................................1915.0050500000000
................................................................................................................................................................................................................................................................................GGCGAACATGGATCTAGT.....................................................................................................................................................................1814.0040400000000
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTCAC....................................................................................................................2314.0040400000000
................................................................................................................................................................................................................................................................................GGCGAACATGGATCTAGTGCACGC...............................................................................................................................................................2414.0040210100000
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTCTTG...................................................................................................................2414.0040400000000
.............................................................................................................................................................................................................................................................................................................................GACTAGATTTCATGCTCGTCTC....................................................................................................................2214.0040400000000
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTCTCC...................................................................................................................2414.0040220000000
...................................................................................................................................................................................................................................................................................GAACATGGATCTAGTGCA..................................................................................................................................................................1814.0040400000000
................................................................................................................................................................................................................................................................................................................................TAGATTTCATGCTCGTCTA....................................................................................................................1914.0040400000000
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTCCT....................................................................................................................2314.0040000010030
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTCTTC...................................................................................................................2413.0030210000000
..............................................................................................................................................................................................................................................................................................................................ACTAGATTTCATGCTCGTCTT....................................................................................................................2113.0030300000000
.................................................................................................................................................................................................................................................................................GCGAACATGGATCTAGTGCAT.................................................................................................................................................................2113.0030300000000
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTCTTA...................................................................................................................2413.0030100000020
droPer2
GGCAATAATCATCATT---------------------------TG----------------------------------------------GAGGAGGAA----------------------------------------------------------------------------------GAAAGGATGGACCCCGTAACAGTGCCAGAG------CCAGAGCCTGGGTCTGATCCGGCAGCGTTTGCTCTTCTCTGACTCTATTTTGTCGGCGAACATGGATCTAGTGCACGGT-TGTTCATGATTAAGTTCGTGACTAGATTTCATGCTCGTCTATTAAGTTGGGTCAACACAA----CGA-ACCGAAAGAGC------------------------------------A--GAGCAAC-------------G-------CAGTTGTCGAASizeHit CountTotal NormTotalM021

Embryo
M042

Female-body
V042

Embryo
V050

Head
V057

Head
V111

Male-body
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTCT.....................................................................................................................22115748.0015748341402562539276110720
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGT.......................................................................................................................2017006.007006157188845570315781811
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTC......................................................................................................................2115831.005831340166521810792119410
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTCTA....................................................................................................................2312844.00284442981327598778118
................................................................................................................................................................................................................................................................................GGCGAACATGGATCTAGTGCACG................................................................................................................................................................2311399.00139921415212956220628
.................................................................................................................................................................................................................................................................................GCGAACATGGATCTAGTGCACG................................................................................................................................................................2211291.0012912691719967218467
.............................................................................................................................................................................................................................................................................................................................GACTAGATTTCATGCTCGTCT.....................................................................................................................211298.0029832910121
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTCA.....................................................................................................................221280.00280020461663
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTC.........................................................................................................................181272.0027226045210
.................................................................................................................................................................................................................................................................................GCGAACATGGATCTAGTGCAC.................................................................................................................................................................211263.00263181055277236
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTCTT....................................................................................................................231219.002191715577312
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCG........................................................................................................................191209.0020987112465022
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGG.......................................................................................................................201180.00180167010120
.................................................................................................................................................................................................................................................................................GCGAACATGGATCTAGTGCA..................................................................................................................................................................201123.001233184114245
.............................................................................................................................................................................................................................................................................................................................GACTAGATTTCATGCTCGTC......................................................................................................................201109.0010901070110
................................................................................................................................................................................................................................................................................GGCGAACATGGATCTAGTGCAC.................................................................................................................................................................22175.00751617621618
................................................................................................................................................................................................................................................................................GGCGAACATGGATCTAGTGCA..................................................................................................................................................................21174.0074311332034
.............................................................................................................................................................................................................................................................................................................................GACTAGATTTCATGCTCGT.......................................................................................................................19172.00720690012
.............................................................................................................................................................................................................................................................................................................................GACTAGATTTCATGCTCGTCTA....................................................................................................................22168.00680680000
..............................................................................................................................................................................................................................................................................................................................ACTAGATTTCATGCTCGTCT.....................................................................................................................20164.0064142852312
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGC.......................................................................................................................20153.005340012100
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTT......................................................................................................................21151.005105115219
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTCG.....................................................................................................................22134.003410804120
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTCC.....................................................................................................................22132.00321060682
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTCTC....................................................................................................................23131.003101034140
.................................................................................................................................................................................................................................................................................GCGAACATGGATCTAGTGCACGG...............................................................................................................................................................23126.00262121128
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTCTAA...................................................................................................................24125.00250220210
...........................................................................................................................................................................................................................................................................................................................GTGACTAGATTTCATGCTCGTCT.....................................................................................................................23125.00251256020
...........................................................................................................................................................................................................................................................................................................................GTGACTAGATTTCATGCTCGTC......................................................................................................................22120.0020920261
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTA......................................................................................................................21118.0018021582
..................................................................................................................................................................................................................................................................................CGAACATGGATCTAGTGCACG................................................................................................................................................................21118.0018791010
...................................................................................................................................................................................................................................................................................GAACATGGATCTAGTGCACG................................................................................................................................................................20117.00171320002
...............................................................................................................................................................................................................................................................................................................................CTAGATTTCATGCTCGTCT.....................................................................................................................19116.0016770020
................................................................................................................................................................................................................................................................................GGCGAACATGGATCTAGTGC...................................................................................................................................................................20116.0016054214
.................................................................................................................................................................................................................................................................................GCGAACATGGATCTAGTGT...................................................................................................................................................................19115.00150200211
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTCTAT...................................................................................................................24114.0014054311
.................................................................................................................................................................................................................................................................................GCGAACATGGATCTAGTGC...................................................................................................................................................................19113.0013530113
.................................................................................................................................................................................................................................................................................GCGAACATGGATCTAGTGCACGT...............................................................................................................................................................23113.0013060214
.............................................................................................................................................................................................................................................................................................................................GACTAGATTTCATGCTCGTCA.....................................................................................................................21112.00120120000
..............................................................................................................................................................................................................................................................................................................................ACTAGATTTCATGCTCGTCTA....................................................................................................................21111.0011071012
...........................................................................................................................................................................................................................................................................................................................GTGACTAGATTTCATGCTCGT.......................................................................................................................21110.0010210313
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTCTG....................................................................................................................2319.009331110
..................................................................................................................................................................................................................................................................................CGAACATGGATCTAGTGCAC.................................................................................................................................................................2019.009080010
.................................................................................................................................................................................................................................................................................GCGAACATGGATCTAGTGTT..................................................................................................................................................................2017.007000016
..................................................................................................................................................................................................................................................................................CGAACATGGATCTAGTGCACGG...............................................................................................................................................................2216.006210012
..............................................................................................................................................................................................................................................................................................................................ACTAGATTTCATGCTCGTC......................................................................................................................1916.006140010
.................................................................................................................................................................................................................................................................................GCGAACATGGATCTAGTGCACGA...............................................................................................................................................................2315.005030011
................................................................................................................................................................................................................................................................................GGCGAACATGGATCTAGTGCACGT...............................................................................................................................................................2415.005010202
.................................................................................................................................................................................................................................................................................GCGAACATGGATCTAGTG....................................................................................................................................................................1815.005011030
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTCTAG...................................................................................................................2415.005230000
.................................................................................................................................................................................................................................................................................................................................AGATTTCATGCTCGTCTA....................................................................................................................1814.004400000
.............................................................................................................................................................................................................................................................................................................................GACTAGATTTCATGCTCG........................................................................................................................1814.004040000
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTAA.....................................................................................................................2214.004040000
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGA.......................................................................................................................2014.004120010
...............................................................................................................................................................................................................................................................................................................................CTAGATTTCATGCTCGTCTA....................................................................................................................2014.004020011
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCT........................................................................................................................1914.004030001
................................................................................................................................................................................................................................................................................GGCGAACATGGATCTAGTGCACT................................................................................................................................................................2314.004100021
.............................................................................................................................................................................................................................................................................................................................GACTAGATTTCATGCTCGTCTAA...................................................................................................................2314.004040000
................................................................................................................................................................................................................................................................................GGCGAACATGGATCTAGTG....................................................................................................................................................................1914.004030001
.................................................................................................................................................................................................................................................................................GCGAACATGGATCTAGTGCACGGT-.............................................................................................................................................................2414.004001021
..............................................................................................................................................................................................................................................................................................................................ACTAGATTTCATGCTCGT.......................................................................................................................1814.004011011
...............................................................................................................................................................................................................................................................................................................................CTAGATTTCATGCTCGTC......................................................................................................................1814.004210010
.................................................................................................................................................................................................................................................................................GCGAACATGGATCTAGTGCACC................................................................................................................................................................2213.003000120
.................................................................................................................................................................................................................................................................................................................................AGATTTCATGCTCGTCTT....................................................................................................................1813.003020010
.................................................................................................................................................................................................................................................................................GCGAACATGGATCTAGTGCACT................................................................................................................................................................2213.003001011
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGCA......................................................................................................................2113.003000120
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTCTGG...................................................................................................................2413.003030000
................................................................................................................................................................................................................................................................................GGCGAACATGGATCTAGTGCACC................................................................................................................................................................2313.003010020
.....................................................................................................................................................................................................................................................................................ACATGGATCTAGTGCACG................................................................................................................................................................1813.003001020
..................................................................................................................................................................................................................................................................................CGAACATGGATCTAGTGCACT................................................................................................................................................................2113.003300000
droWil2
GGCAATAATCATTGTA---------------------------GG----------------------------------------------ATTGAG-------------CTGGATGTGGATGAGATGTGAGTGAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGA---T--GGA--T--GGATGGATGGAGTCCTT-------------------------------TCT-ATGTGGCAGCGT---CTCT----TGACTCTATTTTGTCGGCGAACATGGATCTAGTGCACGGTTTGTTCATGATTAAGTTCGTGACTAGATTTCATGCTCGTCTATTAAGTTGGGTCAGCACAA----CA-----------AGAGC---------------------------------G--CAG----CGGAGAGGGCAAACTATAATGCAGTTAATGTGSizeHit CountTotal NormTotalM020

Head
M045

Female-body
V117

Male-body
V118

Embryo
V119

Head
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGT.......................................................................................................................20127442.0027442113571344216170985482
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTCT.....................................................................................................................22125045.00250452267833862684565358
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTCTA....................................................................................................................23110712.001071298269110461441675
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTC......................................................................................................................2117479.0074792307184532919181080
................................................................................................................................................................................................................................................................................GGCGAACATGGATCTAGTGCACG................................................................................................................................................................2314568.0045687705272272389655
.................................................................................................................................................................................................................................................................................GCGAACATGGATCTAGTGCACG................................................................................................................................................................2213713.0037138366234731308473
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGG.......................................................................................................................201901.009018982010
.............................................................................................................................................................................................................................................................................................................................GACTAGATTTCATGCTCGTCT.....................................................................................................................211615.006150602184
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTCA.....................................................................................................................221344.003440112221515
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCG........................................................................................................................191324.0032470160262840
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGC.......................................................................................................................201319.003193001468
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTCC.....................................................................................................................221272.002722261811215
..............................................................................................................................................................................................................................................................................................................................ACTAGATTTCATGCTCGTCT.....................................................................................................................201243.002431011110967
.............................................................................................................................................................................................................................................................................................................................GACTAGATTTCATGCTCGTCTA....................................................................................................................221192.001920187041
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTCTT....................................................................................................................231180.0018028013859
................................................................................................................................................................................................................................................................................GGCGAACATGGATCTAGTGCAC.................................................................................................................................................................221163.0016344311816
................................................................................................................................................................................................................................................................................GGCGAACATGGATCTAGTGCA..................................................................................................................................................................211148.00148316810912
.............................................................................................................................................................................................................................................................................................................................GACTAGATTTCATGCTCGTC......................................................................................................................201133.001333129010
.................................................................................................................................................................................................................................................................................GCGAACATGGATCTAGTGCAC.................................................................................................................................................................211125.0012521595355
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTCTC....................................................................................................................231116.00116206911214
...........................................................................................................................................................................................................................................................................................................................GTGACTAGATTTCATGCTCGTCT.....................................................................................................................231103.00103311313523
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTC.........................................................................................................................181100.001007912081
.............................................................................................................................................................................................................................................................................................................................GACTAGATTTCATGCTCGT.......................................................................................................................19199.0099289224
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTCTAA...................................................................................................................24195.00950590351
..................................................................................................................................................................................................................................................................................CGAACATGGATCTAGTGCACG................................................................................................................................................................21185.00853638092
...........................................................................................................................................................................................................................................................................................................................GTGACTAGATTTCATGCTCGTC......................................................................................................................22178.00785840133
...............................................................................................................................................................................................................................................................................CGGCGAACATGGATCTAGTGCACG................................................................................................................................................................24166.00662791236
................................................................................................................................................................................................................................................................................GGCGAACATGGATCTAGTGC...................................................................................................................................................................20160.00603514110
.................................................................................................................................................................................................................................................................................GCGAACATGGATCTAGTGCA..................................................................................................................................................................20154.00541209186
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTCTAT...................................................................................................................24153.00530350144
.................................................................................................................................................................................................................................................................................GCGAACATGGATCTAGTGCACGG...............................................................................................................................................................23147.00475162213
..............................................................................................................................................................................................................................................................................................................................ACTAGATTTCATGCTCGTCTA....................................................................................................................21140.00401201342
...............................................................................................................................................................................................................................................................................................................................CTAGATTTCATGCTCGTCT.....................................................................................................................19138.0038224345
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTCG.....................................................................................................................22136.0036341010
...................................................................................................................................................................................................................................................................................GAACATGGATCTAGTGCACG................................................................................................................................................................20135.0035877121
................................................................................................................................................................................................................................................................................GGCGAACATGGATCTAGTGCACGT...............................................................................................................................................................24135.00350116153
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCT........................................................................................................................19130.0030820119
..................................................................................................................................................................................................................................................................................CGAACATGGATCTAGTGCACGG...............................................................................................................................................................22130.0030174063
.......................................................................................................................................................................................................................................................................................................GTTTGTTCATGATTAAGTTCG...........................................................................................................................................21129.0029710192
.................................................................................................................................................................................................................................................................................GCGAACATGGATCTAGTGC...................................................................................................................................................................19129.00290611210
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTCTG....................................................................................................................23128.00281112050
................................................................................................................................................................................................................................................................................GGCGAACATGGATCTAGTGCACT................................................................................................................................................................23126.0026164141
.................................................................................................................................................................................................................................................................................GCGAACATGGATCTAGTGCACGT...............................................................................................................................................................23122.002259440
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTCTCC...................................................................................................................24121.0021021000
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTA......................................................................................................................21121.0021220125
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTCTAAA..................................................................................................................25119.0019018010
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTT......................................................................................................................21119.001939034
................................................................................................................................................................................................................................................................................GGCGAACATGGATCTAGTGCACGG...............................................................................................................................................................24119.001918172
...........................................................................................................................................................................................................................................................................................................................GTGACTAGATTTCATGCTCGT.......................................................................................................................21118.001880136
................................................................................................................................................................................................................................................................................................................................TAGATTTCATGCTCGTCT.....................................................................................................................18117.0017211103
.................................................................................................................................................................................................................................................................................GCGAACATGGATCTAGTGCACGGT..............................................................................................................................................................24115.001513290
.............................................................................................................................................................................................................................................................................................................................GACTAGATTTCATGCTCG........................................................................................................................18115.0015015000
.................................................................................................................................................................................................................................................................................GCGAACATGGATCTAGTGCACT................................................................................................................................................................22115.001584030
.................................................................................................................................................................................................................................................................................................................................AGATTTCATGCTCGTCTA....................................................................................................................18114.001449010
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGA.......................................................................................................................20113.001332242
...............................................................................................................................................................................................................................................................................CGGCGAACATGGATCTAGTGCA..................................................................................................................................................................22113.0013110101
................................................................................................................................................................................................................................................................................GGCGAACATGGATCTAGTGCACA................................................................................................................................................................23111.001141132
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTCTAG...................................................................................................................24111.001115041
..................................................................................................................................................................................................................................................................................CGAACATGGATCTAGTGCACGGT..............................................................................................................................................................2319.00911052
..............................................................................................................................................................................................................................................................................................................................ACTAGATTTCATGCTCGT.......................................................................................................................1818.00817000
..................................................................................................................................................................................................................................................................................CGAACATGGATCTAGTGCAC.................................................................................................................................................................2018.00832102
................................................................................................................................................................................................................................................................................GGCGAACATGGATCTAGTG....................................................................................................................................................................1918.00801034
................................................................................................................................................................................................................................................................................GGCGAACATGGATCTAGTGCACGA...............................................................................................................................................................2418.00802150
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTCTACA..................................................................................................................2518.00808000
.................................................................................................................................................................................................................................................................................GCGAACATGGATCTAGTGCACC................................................................................................................................................................2218.00850030
................................................................................................................................................................................................................................................................................GGCGAACATGGATCTAGTGCACC................................................................................................................................................................2317.00721211
...........................................................................................................................................................................................................................................................................................................................GTGACTAGATTTCATGCTCGTCC.....................................................................................................................2316.00660000
.................................................................................................................................................................................................................................................................................GCGAACATGGATCTAGTGT...................................................................................................................................................................1916.00602301
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTCTCCC..................................................................................................................2516.00615000
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCTA.......................................................................................................................2016.00600042
...........................................................................................................................................................................................................................................................................................................................GTGACTAGATTTCATGCTCGTT......................................................................................................................2216.00601041
.............................................................................................................................................................................................................................................................................................................................GACTAGATTTCATGCTCGTCTAT...................................................................................................................2315.00505000
.................................................................................................................................................................................................................................................................................GCGAACATGGATCTAGTGCACGA...............................................................................................................................................................2315.00512020
.............................................................................................................................................................................................................................................................................................................................GACTAGATTTCATGCTCGTCA.....................................................................................................................2115.00505000
..............................................................................................................................................................................................................................................................................................................................ACTAGATTTCATGCTCGTC......................................................................................................................1915.00503200
................................................................................................................................................................................................................................................................................................................................TAGATTTCATGCTCGTCTA....................................................................................................................1915.00503200
....................................................................................................................................................................................................................................................................................AACATGGATCTAGTGCACG................................................................................................................................................................1915.00530110
.............................................................................................................................................................................................................................................................................................................................GACTAGATTTCATGCTCGTCTT....................................................................................................................2215.00505000
...........................................................................................................................................................................................................................................................................................................................GTGACTAGATTTCATGCTCGTCTC....................................................................................................................2415.00550000
.............................................................................................................................................................................................................................................................................................................................GACTAGATTTCATGCTCGTCTC....................................................................................................................2215.00505000
.............................................................................................................................................................................................................................................................................................................................GACTAGATTTCATGCTCGTCTAA...................................................................................................................2315.00505000
................................................................................................................................................................................................................................................................................GGCGAACATGGATCTAGTGCACGGT..............................................................................................................................................................2514.00401201
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTCCC....................................................................................................................2314.00404000
...........................................................................................................................................................................................................................................................................................................................GTGACTAGATTTCATGCTCGTCTA....................................................................................................................2414.00412010
...............................................................................................................................................................................................................................................................................................................................CTAGATTTCATGCTCGTCTA....................................................................................................................2014.00404000
.................................................................................................................................................................................................................................................................................GCGAACATGGATCTAGTGCACGGTT.............................................................................................................................................................2514.00401021
...............................................................................................................................................................................................................................................................................CGGCGAACATGGATCTAGTGCAC.................................................................................................................................................................2314.00400130
................................................................................................................................................................................................................................................................................GGCGAACATGGATCTAGT.....................................................................................................................................................................1814.00400040
droVir3
G--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTTCTCTGACTCTATTTTGTCGGCGAACATGGATCTAGTGCACGGT-TGTTCATGATTAAGTTCGTGACTAGATTTCATGCTCGTCTATTAAGTTGGGTCAACACAC-------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM027

Male-body
M028

Head
M047

Female-body
M061

Embryo
SRR060654

Ovary
SRR060655

Testis
SRR060656

Ovary
SRR060657

Testis
SRR060658

Ovary
SRR060659

Testis
SRR060660

Ovary
SRR060661

Embryo
SRR060662

Embryo
SRR060663

Embryo
SRR060664

Male-body
SRR060665

Female-body
SRR060666

Male-body
SRR060667

Female-body
SRR060668

Male-body
SRR060669

Female-body
SRR060670

Testis
SRR060671

Male-body
SRR060672

Female-body
SRR060673

Ovary
SRR060674

Ovary
SRR060675

Ovary
SRR060676

Ovary
SRR060677

Ovary
SRR060678

Testis
SRR060679

Testis
SRR060680

Testis
SRR060681

Testis
SRR060682

Embryo
SRR060683

Testis
SRR060684

Embryo
SRR060685

Embryo
SRR060686

Embryo
SRR060687

Embryo
SRR060688

Ovary
SRR060689

Testis
SRR1106712

embryo_0-2h
SRR1106713

embryo_0-2h
SRR1106714

embryo_2-4h
SRR1106715

embryo_4-6h
SRR1106716

embryo_4-6h
SRR1106717

embryo_6-8h
SRR1106718

embryo_6-8h
SRR1106719

embryo_8-10h
SRR1106720

embryo_8-10h
SRR1106721

embryo_10-12h
SRR1106722

embryo_10-12h
SRR1106723

embryo_12-14h
SRR1106724

embryo_12-14h
SRR1106725

embryo_14-16h
SRR1106726

embryo_14-16h
SRR1106727

larvae
SRR1106728

larvae
SRR1106729

mixed whole adult body
SRR1106730

embryo_16-30h
V047

Embryo
V053

Head
V116

Male-body
GSM1528803

follicle cells
SRR2096013

Ovary_Strain_9_oxidized
SRR2096014

Ovary_Strain_160_oxidized
SRR2096026

embryo_0-2h from 14 day old Strain 9 mothers
SRR2096038

embryo_0-2h from 14 day old Strain 9 mothers
SRR2096050

embryo_0-2h from 14 day old Strain 160 mothers
SRR2096055

Ovary_Min_43
SRR2096056

Ovary_Min_46
SRR2096057

Ovary_Min_50
SRR2096058

Ovary_Min_98
SRR2096059

Ovary_Min_164
SRR2096060

Ovary_Min_193
SRR2096061

embryo_0-2h from 14 day old Strain 160 mothers
SRR2096072

embryo_0-2h from 15to16 day old dysgenic mothers
SRR2096079

embryo_0-2h from 15to16 day old dysgenic mothers
SRR2096080

embryo_0-2h from 15to16 day old nondysgenic mothers
SRR2096081

embryo_0-2h from 15to16 day old nondysgenic mothers
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTCT.....................................................................................................................2211093713.00109371338265412316939230024064875513209653123276256422257090120417140975860157021718495091863927296264464975042751355357917066487494084586418052531222535215272221443536637021269884274827556152917271121122035728231524236630879955912186811992350726839433731713671794851394472796234339131720
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTC......................................................................................................................211351532.0035153281616098389217109201745040634217357812671224540135197250216981098231821031247102473028241128383807263311479113178768176233216904121678713206719753001172520100126695179921113112671263210104011196294921517687193900158714096134171015773201341811534634142
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTCTA....................................................................................................................231328542.00328542503539118989074926216074032522576186454175232334425069523235235421483611464253771626016676156493703936934883179313290105059818258561811148216009997814312431111101111502333100063048683632079965985931211991067646702108792230120
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGT.......................................................................................................................201166069.0016606922588973344444200737388957231522572307101316582496557944432656958536715907715875104167211802632207413351517592161539114564502838072813417226815534040243238204430414026241564482504740833677147665387886939025157131531211534945513312144814319102943
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTCTAA...................................................................................................................24122398.0022398001616631115101207214837361237182612538214113078622891165690751597218221090363324461643235120001000000000000000630113198310801001527810121300001
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTCTT....................................................................................................................23113238.001323811173319220652225302527416386269124299325195105580547388526449100880748743415950949284284517732457543167100000000000000000086013060238811019984221200001
.................................................................................................................................................................................................................................................................................GCGAACATGGATCTAGTGCACG................................................................................................................................................................22110492.0010492130285153462219256302678911236136748206132120216964919571166239178148282285188219842743526442377155180197000021326438510600015127338186521922021066737191418922144011164237
................................................................................................................................................................................................................................................................................GGCGAACATGGATCTAGTGCACG................................................................................................................................................................2317965.0079651161314611304682004745716810071255332415391311138970338126145334240746225833152345429899101001167959181313166213826011358618149184105143123541862082723431210111116
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTCTAT...................................................................................................................2417538.00753802107440238051441231226225103597713142147753743268835182312046321738882008484633307819010000000000000000085526658438110057664600101
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTCA.....................................................................................................................2216680.0066801040543929124443032210113028153630174148561443692476863901098224904012537554884236729921000000000000000000020245338321300000011410100
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTCTC....................................................................................................................2315753.005753325613292966094451102096671858678924321591504674397101482328193573391721947473432525600000000001000000002150136250001914138141200000
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTCTAAA..................................................................................................................2514278.0042780035050100305001010203006103613447924605026247015637127111220000000000000000000000001168134900110112300000
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCG........................................................................................................................1912777.0027771582235038501622141280832815713196562219994331695610412153134206418102497676000000001011002312211136543510121832214682113768710031529
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTCC.....................................................................................................................2212616.0026163668442253013812444810001218914138203244490443663491891901343072571161919156912500000000000000000001630336310014100600000
.................................................................................................................................................................................................................................................................................GCGAACATGGATCTAGTGCAC.................................................................................................................................................................2111792.001792102013317141123213133119105167516593214115735193164414161718241820190000000000020000001394808231911801391031001153735122145
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGG.......................................................................................................................2011649.001649321114700011123112100000010020000000000000002000000000000000010034100000035242419183400000
.............................................................................................................................................................................................................................................................................................................................GACTAGATTTCATGCTCGTCT.....................................................................................................................2111477.0014770193306131903231006636315710151812443520321318191252031312080000000000000000000021418600079243400000
...........................................................................................................................................................................................................................................................................................................................GTGACTAGATTTCATGCTCGTCT.....................................................................................................................2311060.001060192725166231146130232165191212634251142358466293518471926172917147000000000000010000281020121001056482630504000000
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTCTAG...................................................................................................................241937.0093700325118010300033121103517584610510713441059025975967820000000000000000000000651350012691213171410001
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTC.........................................................................................................................181921.009211257701095620200005446241153332417171061537161412101182890100000100100004200231012225122659544652566121221522
...........................................................................................................................................................................................................................................................................................................................GTGACTAGATTTCATGCTCGT.......................................................................................................................211784.007842292131616482613156211911645611397178815817227201176275263100010001000000000113264200951143282226482402202
.............................................................................................................................................................................................................................................................................................................................GACTAGATTTCATGCTCGTC......................................................................................................................201761.0076101654014100311000000101011010625812233200130000000000000000000012170000056316200000
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTCTG....................................................................................................................231759.00759072612414472524000421050479263621594112124173842041623944110000000000000000000020025210001599712800000
...........................................................................................................................................................................................................................................................................................................................GTGACTAGATTTCATGCTCGTC......................................................................................................................221702.0070215372927251925610021533122244153612171278726334312150000000000001100000313805300164583047825510000
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTCTTC...................................................................................................................241693.00693415319300000007413346171106414716514256127011110031600000000000000000000002491900020002200000
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTT......................................................................................................................211651.00651214601937417653010111091411107212928911145182432812186542030000000000000000000013420111200035135400000
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTCTAC...................................................................................................................241635.006353094215010000079332161510520244135654037781519192211360000000000001000000000112824000121231571000000
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGC.......................................................................................................................201602.0060266367222917166302300010031111211330010700005200000000000000000004461110010016000400000
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTCTCC...................................................................................................................241497.004970032001230000000251332156730033737872131050000012000000000000000000000046700060002100000
.......................................................................................................................................................................................................................................................................................................GT-TGTTCATGATTAAGTTCG...........................................................................................................................................201485.004850011111800000000010000005347410010001010000000000000100000011000030001061014543627200000
.............................................................................................................................................................................................................................................................................................................................GACTAGATTTCATGCTCGTCTA....................................................................................................................221434.00434002930215000010000012222031041812571760399654000000000000000000010009200010001000000
................................................................................................................................................................................................................................................................................GGCGAACATGGATCTAGTGCAC.................................................................................................................................................................221430.0043061234237123010900041131122122141116820401000011500000133513342410268815055858261871971315269
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTCG.....................................................................................................................221415.004151713301418242233001421610191821143126384547284215100010000000010000000053215160002915171092200000
...............................................................................................................................................................................................................................................................................................................................CTAGATTTCATGCTCGTCT.....................................................................................................................191399.00399122001522581802010532322833531962310272432023563316000000000000000000001000210003218030003
................................................................................................................................................................................................................................................................................................................................TAGATTTCATGCTCGTCT.....................................................................................................................181397.003970180171342313410000911310732452533151117617084766662112000000000000000000000207601033181000000
.................................................................................................................................................................................................................................................................................GCGAACATGGATCTAGTGCACGG...............................................................................................................................................................231384.003841285434060220010212310400119691341214151401430000000020100000000721714629257016110105172425
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCT..........................................................................................................................171356.003560000000000000000000000000000000000000000000000000000000011001012612644364900000062242631
.................................................................................................................................................................................................................................................................................GCGAACATGGATCTAGTGCA..................................................................................................................................................................201327.0032725551349000000115545427431544841217121106122091600000000000000000000193902601500000000111
..................................................................................................................................................................................................................................................................................CGAACATGGATCTAGTGCACGG...............................................................................................................................................................221307.00307261101141030100131102300633108511111122101000000000000000000002500013221512155416111312162236
.............................................................................................................................................................................................................................................................................................................................GACTAGATTTCATGCTCGT.......................................................................................................................191304.00304122590012001001101010000032001100100000011000000000000000000011100000043642200000
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTA......................................................................................................................211301.0030102120871424230011302226903191414784315233765168000000000000000000006491340100303300020
..............................................................................................................................................................................................................................................................................................................................ACTAGATTTCATGCTCGTCT.....................................................................................................................201267.0026700645571514040004110126219859679166132432184000000000000000110044603201101014300000
..................................................................................................................................................................................................................................................................................CGAACATGGATCTAGTGCACG................................................................................................................................................................211264.0026414101111401100001100100024204822200000111000000010000122000010030011201726515241210021
.................................................................................................................................................................................................................................................................................................................................AGATTTCATGCTCGTCTA....................................................................................................................181243.00243016015335114140003014105212710778210111022301650000000000000000000100016700035032700000
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTCTATA..................................................................................................................251220.0022000110002000000010000100002213431922001005156102000000000000000000000001401500000000000000
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTCTATT..................................................................................................................251196.0019600510010000000750207147286161255471207161171000000000000000000000002111300000000200000
...............................................................................................................................................................................................................................................................................CGGCGAACATGGATCTAGTGCACG................................................................................................................................................................241195.0019584103228034100001200230251211702250300002300000001000000000011364200011716611111700000
...............................................................................................................................................................................................................................................................................................................................CTAGATTTCATGCTCGTCTA....................................................................................................................201194.001940040252280513000000110622279110220101121001860000000000000000000000001100023346400000
................................................................................................................................................................................................................................................................................GGCGAACATGGATCTAGTGCA..................................................................................................................................................................211177.0017711147811101010001010024022350822131020010730000001000110110005106903100135532100014
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTCTCA...................................................................................................................241159.001590000108000000000000000010020110010777342220000000000000000000000010100000000000000
................................................................................................................................................................................................................................................................................................................................TAGATTTCATGCTCGTCTA....................................................................................................................191151.0015100801641920170001301312111482105120228010248000000000000000000000003000000014400000
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTCTATC..................................................................................................................251117.0011700220010000000110110221112312581423100100000000000000000000000000131800000010000000
.................................................................................................................................................................................................................................................................................GCGAACATGGATCTAGTGCACGT...............................................................................................................................................................231115.00115022903230100001730231224511811201112200310000000000000000000001304201000000000000
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTCTTA...................................................................................................................241111.0011100702130000000000000000121145000070223188400000000000000000000000011200000000000000
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTCTTG...................................................................................................................241109.001090013000100000000102000021261343419703961020000000000000000000000006300000001000000
...............................................................................................................................................................................................................................................................................................................................CTAGATTTCATGCTCGTC......................................................................................................................181108.0010802120318080100000111020084073100001000071000000000000000000000000100055495700000
...........................................................................................................................................................................................................................................................................................................................GTGACTAGATTTCATGCTCGTCTA....................................................................................................................241103.00103218110200000001202030010481012521310105310000000000000000000000015300053042000000
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCT........................................................................................................................19187.008702103320100000100000100322655421011002000000000000000000000022002107611010050011
.................................................................................................................................................................................................................................................................................GCGAACATGGATCTAGTGCACT................................................................................................................................................................22182.0082115120100000000000001004011001010000002000000000010020000010019000534000001413115
................................................................................................................................................................................................................................................................................GGCGAACATGGATCTAGTGC...................................................................................................................................................................20174.00740142001001002000000000022231000100000230000000000000000000261300000273362820011
...........................................................................................................................................................................................................................................................................................................................GTGACTAGATTTCATGCTCGTCTT....................................................................................................................24173.00730000110000000010011122205469500121014141000000000000000000000037100012003000000
..............................................................................................................................................................................................................................................................................................................................ACTAGATTTCATGCTCGTCTA....................................................................................................................21173.0073001304031201000100001010102154120402112041000000000000000000020300000000100000000
.................................................................................................................................................................................................................................................................................GCGAACATGGATCTAGTGC...................................................................................................................................................................19172.0072031600002100000101211110202200105020000060000000000000000000110700000020110000000
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTG......................................................................................................................21168.006800500026100000160000240022101100100231042000000000000000000000100000001010000000
..............................................................................................................................................................................................................................................................................................................................ACTAGATTTCATGCTCGTC......................................................................................................................19168.006802280103020000100000050140221030001010040000000000000000000000000000003210100000
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTAA.....................................................................................................................22161.006100600020000000000000230020050130140001010000000000000000000000002022000000001032
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTCTACA..................................................................................................................25161.006100030000000010000000000040611101206106700000000000000000000000039000000000000000
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTCTAAG..................................................................................................................25160.006000200000000000100010010033118000020157200000000000000000000000006600001000000000
.............................................................................................................................................................................................................................................................................................................................GACTAGATTTCATGCTCGTCTAT...................................................................................................................23156.005600500000000000010010000011310110000121000000000000000000000000333100000000000000
................................................................................................................................................................................................................................................................................GGCGAACATGGATCTAGTGCACGT...............................................................................................................................................................24155.005500201270110000000000002100165400001000020000000010000000000001401300000000000000
...................................................................................................................................................................................................................................................................................GAACATGGATCTAGTGCACG................................................................................................................................................................20153.005310100103011010020000010040000000206010020000000000000000000031400100002150000000
................................................................................................................................................................................................................................................................................GGCGAACATGGATCTAGTGCACGG...............................................................................................................................................................24147.004701101212010000000000110000033010200000012000000000000000000001601400010010100000
.................................................................................................................................................................................................................................................................................GCGAACATGGATCTAGTGCACGGT-.............................................................................................................................................................24147.00471230303110000010021000003032120000000100000000000010000000110390101000000000000
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTCTTCC..................................................................................................................25145.004500500200000000110010100000006631900000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................AGATTTCATGCTCGTCT.....................................................................................................................17145.0045000000000000000000000000000000000000000000000000000000001000000271401000000020000
droMoj3
G--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTTCTCTGACTCTATTTTGTCGGCGAACATGGATCTAGTGCACGGT-TGTTCATGATTAAGTTCGTGACTAGATTTCATGCTCGTCTATTAAGTTGGGTCAATACAC-------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM046

Female-body
V041

Embryo
V049

Head
V056

Head
M060

Embryo
V110

Male-body
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTCT.....................................................................................................................22142058.004205816519159337334827135231863
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTC......................................................................................................................21116210.001621063534062025258030561790
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGT.......................................................................................................................20114912.001491230121130172222637856000
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTCTA....................................................................................................................23110473.0010473494018725977661855443
................................................................................................................................................................................................................................................................................GGCGAACATGGATCTAGTGCACG................................................................................................................................................................2314285.004285347631881512422646
.................................................................................................................................................................................................................................................................................GCGAACATGGATCTAGTGCACG................................................................................................................................................................2214004.00400460632922041011931246
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTCC.....................................................................................................................2213654.0036542038736142
.............................................................................................................................................................................................................................................................................................................................GACTAGATTTCATGCTCGTCT.....................................................................................................................2111213.0012131197000151
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTCA.....................................................................................................................221895.008956289311151426
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCG........................................................................................................................191792.007925732644541580
................................................................................................................................................................................................................................................................................GGCGAACATGGATCTAGTGCAC.................................................................................................................................................................221646.0064619364756911
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTCTC....................................................................................................................231509.005093801734391821
..............................................................................................................................................................................................................................................................................................................................ACTAGATTTCATGCTCGTCT.....................................................................................................................201480.0048031810544112
.............................................................................................................................................................................................................................................................................................................................GACTAGATTTCATGCTCGTC......................................................................................................................201454.0045444610331
.................................................................................................................................................................................................................................................................................GCGAACATGGATCTAGTGCAC.................................................................................................................................................................211405.0040511312211921426
.............................................................................................................................................................................................................................................................................................................................GACTAGATTTCATGCTCGTCTA....................................................................................................................221356.0035635400020
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTCTT....................................................................................................................231284.002841281538434317
................................................................................................................................................................................................................................................................................GGCGAACATGGATCTAGTGCA..................................................................................................................................................................211274.0027412475617925
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCT........................................................................................................................191264.0026420012601
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTCTAA...................................................................................................................241223.00223185600311
.............................................................................................................................................................................................................................................................................................................................GACTAGATTTCATGCTCGT.......................................................................................................................191215.0021520901302
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGC.......................................................................................................................201174.00174413131521
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTCTAT...................................................................................................................241162.00162101802501
................................................................................................................................................................................................................................................................................GGCGAACATGGATCTAGTGC...................................................................................................................................................................201131.00131522101030
.................................................................................................................................................................................................................................................................................GCGAACATGGATCTAGTGCACGG...............................................................................................................................................................231116.00116259155125
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTCTCC...................................................................................................................241102.001029400071
..............................................................................................................................................................................................................................................................................................................................ACTAGATTTCATGCTCGTCTA....................................................................................................................21195.009565201621
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTCTATC..................................................................................................................25192.009275001160
.................................................................................................................................................................................................................................................................................GCGAACATGGATCTAGTGCA..................................................................................................................................................................20188.0088274373116
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCC........................................................................................................................19182.00821000810
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTCTAAA..................................................................................................................25172.00727110000
..................................................................................................................................................................................................................................................................................CGAACATGGATCTAGTGCACG................................................................................................................................................................21169.006957000102
...............................................................................................................................................................................................................................................................................CGGCGAACATGGATCTAGTGCACG................................................................................................................................................................24167.00676727405
...........................................................................................................................................................................................................................................................................................................................GTGACTAGATTTCATGCTCGTCT.....................................................................................................................23167.0067161843188
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTCTCCC..................................................................................................................25160.00606000000
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTT......................................................................................................................21151.0051130911216
.............................................................................................................................................................................................................................................................................................................................GACTAGATTTCATGCTCG........................................................................................................................18150.00504901000
.............................................................................................................................................................................................................................................................................................................................GACTAGATTTCATGCTCGTCA.....................................................................................................................21144.00444400000
................................................................................................................................................................................................................................................................................GGCGAACATGGATCTAGTGCACT................................................................................................................................................................23143.00432011372
...............................................................................................................................................................................................................................................................................................................................CTAGATTTCATGCTCGTCT.....................................................................................................................19143.00432712175
.......................................................................................................................................................................................................................................................................................................GT-TGTTCATGATTAAGTTCG...........................................................................................................................................20142.0042141101106
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTCTAG...................................................................................................................24142.004230200100
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTCTAC...................................................................................................................24141.004121100190
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCTA.......................................................................................................................20240.50810000810
................................................................................................................................................................................................................................................................................GGCGAACATGGATCTAGTGCACGT...............................................................................................................................................................24139.00395712168
.................................................................................................................................................................................................................................................................................GCGAACATGGATCTAGTGC...................................................................................................................................................................19137.003713032109
..................................................................................................................................................................................................................................................................................CGAACATGGATCTAGTGCACGG...............................................................................................................................................................22136.003615012612
.................................................................................................................................................................................................................................................................................GCGAACATGGATCTAGTGCACGT...............................................................................................................................................................23136.003613003155
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTC.........................................................................................................................18134.003411113180
.................................................................................................................................................................................................................................................................................GCGAACATGGATCTAGTGCACGGT-.............................................................................................................................................................24133.00336332109
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTCTG....................................................................................................................23133.00332721120
................................................................................................................................................................................................................................................................................................................................TAGATTTCATGCTCGTCT.....................................................................................................................18131.003110112170
..............................................................................................................................................................................................................................................................................................................................ACTAGATTTCATGCTCGTC......................................................................................................................19129.00291700129
...........................................................................................................................................................................................................................................................................................................................GTGACTAGATTTCATGCTCGT.......................................................................................................................21127.00276253011
...........................................................................................................................................................................................................................................................................................................................GTGACTAGATTTCATGCTCGTC......................................................................................................................22126.0026622691
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTA......................................................................................................................21126.0026814247
................................................................................................................................................................................................................................................................................GGCGAACATGGATCTAGTGCACC................................................................................................................................................................23126.00260100250
...............................................................................................................................................................................................................................................................................CGGCGAACATGGATCTAGTGCAC.................................................................................................................................................................23125.00250100240
.............................................................................................................................................................................................................................................................................................................................GACTAGATTTCATGCTCGTCTC....................................................................................................................22125.00252500000
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTCTACC..................................................................................................................25124.00242200020
...................................................................................................................................................................................................................................................................................GAACATGGATCTAGTGCACG................................................................................................................................................................20120.0020401186
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCTCT......................................................................................................................21718.4312910001280
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGG.......................................................................................................................20116.0016143800
...............................................................................................................................................................................................................................................................................CGGCGAACATGGATCTAGTGCA..................................................................................................................................................................22115.00150301101
.................................................................................................................................................................................................................................................................................GCGAACATGGATCTAGTGCACT................................................................................................................................................................22115.0015320271
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCTC.......................................................................................................................20215.00300000300
.............................................................................................................................................................................................................................................................................................................................GACTAGATTTCATGCTCGTCTT....................................................................................................................22115.00151500000
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTAA.....................................................................................................................22114.00141300010
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTCTATCC.................................................................................................................26114.00141300010
................................................................................................................................................................................................................................................................................GGCGAACATGGATCTAGTGCACGA...............................................................................................................................................................24114.0014401162
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTCG.....................................................................................................................22112.0012403410
................................................................................................................................................................................................................................................................................GGCGAACATGGATCTAGTGCACGG...............................................................................................................................................................24112.0012101271
...........................................................................................................................................................................................................................................................................................................................GTGACTAGATTTCATGCTCGTT......................................................................................................................22112.0012101127
.............................................................................................................................................................................................................................................................................................................................GACTAGATTTCATGCTCGTCTAA...................................................................................................................23111.00111100000
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTCTATT..................................................................................................................25111.0011900020
................................................................................................................................................................................................................................................................................GGCGAACATGGATCTAGTGCACGC...............................................................................................................................................................24111.0011020180
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTCTTC...................................................................................................................24111.0011801020
..............................................................................................................................................................................................................................................................................................................................ACTAGATTTCATGCTCGTCC.....................................................................................................................20110.0010100090
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGA.......................................................................................................................20110.0010313021
...............................................................................................................................................................................................................................................................................CGGCGAACATGGATCTAGTGC...................................................................................................................................................................21110.0010040051
.............................................................................................................................................................................................................................................................................................................................GACTAGATTTCATGCTCGTCTCC...................................................................................................................2319.009900000
droGri2
G--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTTTTCTGACTCTATTTTGTCGGCGAACATGGATCTAGTGCACGGT-TGTTCATGATTAAGTTCGTGACTAGATTTCATGCTCGTCTATTAAGTTGGGTCAACACACAACACAAAAAAAAAAGAGGAGAGC--------------------------------------AAA-------------G----------CA------SizeHit CountTotal NormTotalM041

Female-body
V109

Male-body
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTCT.....................................................................................................................2216297.00629745221775
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGT.......................................................................................................................2011367.0013672331134
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTC......................................................................................................................211933.00933498435
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTCTA....................................................................................................................231551.0055148170
.............................................................................................................................................................................................................................................................................................................................GACTAGATTTCATGCTCGTCT.....................................................................................................................211382.003823820
................................................................................................................................................................................................................................................................................GGCGAACATGGATCTAGTGCACG................................................................................................................................................................231180.001808694
.................................................................................................................................................................................................................................................................................GCGAACATGGATCTAGTGCACG................................................................................................................................................................221148.001487672
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTCTT....................................................................................................................23183.00836617
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTCTAT...................................................................................................................24159.0059554
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCG........................................................................................................................19157.00573522
.............................................................................................................................................................................................................................................................................................................................GACTAGATTTCATGCTCGTC......................................................................................................................20133.0033330
.............................................................................................................................................................................................................................................................................................................................GACTAGATTTCATGCTCGT.......................................................................................................................19130.0030300
.............................................................................................................................................................................................................................................................................................................................GACTAGATTTCATGCTCGTCTA....................................................................................................................22130.0030300
.................................................................................................................................................................................................................................................................................GCGAACATGGATCTAGTGCAC.................................................................................................................................................................21118.0018126
..............................................................................................................................................................................................................................................................................................................................ACTAGATTTCATGCTCGTCT.....................................................................................................................20117.0017143
...........................................................................................................................................................................................................................................................................................................................GTGACTAGATTTCATGCTCGTCT.....................................................................................................................23114.001495
.................................................................................................................................................................................................................................................................................GCGAACATGGATCTAGTGCA..................................................................................................................................................................20111.0011101
...............................................................................................................................................................................................................................................................................CGGCGAACATGGATCTAGTGCACG................................................................................................................................................................24110.001037
................................................................................................................................................................................................................................................................................................................................TAGATTTCATGCTCGTCT.....................................................................................................................18110.0010100
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTCA.....................................................................................................................2218.00871
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTCTAA...................................................................................................................2418.00871
..................................................................................................................................................................................................................................................................................CGAACATGGATCTAGTGCACG................................................................................................................................................................2118.00880
.............................................................................................................................................................................................................................................................................................................................GACTAGATTTCATGCTCGTCTT....................................................................................................................2217.00770
................................................................................................................................................................................................................................................................................GGCGAACATGGATCTAGTGCA..................................................................................................................................................................2117.00743
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTCTTG...................................................................................................................2417.00770
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTCTG....................................................................................................................2317.00770
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTCTATT..................................................................................................................2516.00660
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTC.........................................................................................................................1816.00660
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTT......................................................................................................................2116.00651
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTCTGG...................................................................................................................2415.00550
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTCC.....................................................................................................................2215.00523
.............................................................................................................................................................................................................................................................................................................................GACTAGATTTCATGCTCGTCTAT...................................................................................................................2315.00550
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTCTC....................................................................................................................2315.00541
................................................................................................................................................................................................................................................................................GGCGAACATGGATCTAGTGC...................................................................................................................................................................2014.00431
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTCTGGC..................................................................................................................2513.00330
.................................................................................................................................................................................................................................................................................GCGAACATGGATCTAGTGCACGGT-.............................................................................................................................................................2413.00321
.......................................................................................................................................................................................................................................................................................................GT-TGTTCATGATTAAGTTCG...........................................................................................................................................2013.00303
................................................................................................................................................................................................................................................................................GGCGAACATGGATCTAGTGCACT................................................................................................................................................................2313.00321
...............................................................................................................................................................................................................................................................................CGGCGAACATGGATCTAGTGCAC.................................................................................................................................................................2313.00312
................................................................................................................................................................................................................................................................................GGCGAACATGGATCTAGTGCACGG...............................................................................................................................................................2413.00312
...............................................................................................................................................................................................................................................................................................................................CTAGATTTCATGCTCGTCT.....................................................................................................................1913.00312
................................................................................................................................................................................................................................................................................GGCGAACATGGATCTAGTG....................................................................................................................................................................1912.00220
.................................................................................................................................................................................................................................................................................GCGAACATGGATCTAGTGCACGT...............................................................................................................................................................2312.00211
................................................................................................................................................................................................................................................................................GGCGAACATGGATCTAGTGCAC.................................................................................................................................................................2212.00220
...............................................................................................................................................................................................................................................................................CGGCGAACATGGATCTAGTGCACT................................................................................................................................................................2412.00220
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCT........................................................................................................................1912.00220
..................................................................................................................................................................................................................................................................................CGAACATGGATCTAGTGCACGG...............................................................................................................................................................2212.00202
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTA......................................................................................................................2112.00202
..............................................................................................................................................................................................................................................................................................................................ACTAGATTTCATGCTCGTCTA....................................................................................................................2112.00220
.................................................................................................................................................................................................................................................................................GCGAACATGGATCTAGTG....................................................................................................................................................................1812.00220
...........................................................................................................................................................................................................................................................................................................................GTGACTAGATTTCATGCTCGT.......................................................................................................................2112.00202
..................................................................................................................................................................................................................................................................................CGAACATGGATCTAGTGCAC.................................................................................................................................................................2012.00211
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTCACA...................................................................................................................2411.00110
.................................................................................................................................................................................................................................................................................GCGAACATGGATCTAGTGCACGG...............................................................................................................................................................2311.00110
...........................................................................................................................................................................................................................................................................................................................GTGACTAGATTTCATGCTCGTC......................................................................................................................2211.00110
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTCTAAAC.................................................................................................................2611.00110
.............................................................................................................................................................................................................................................................................................................................GACTAGATTTCATGCTCGTCTTAG..................................................................................................................2411.00110
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTCTCC...................................................................................................................2411.00110
.................................................................................................................................................................................................................................................................................................................................AGATTTCATGCTCGTCTT....................................................................................................................1811.00110
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTCTATGG.................................................................................................................2611.00110
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTCTCA...................................................................................................................2411.00110
.................................................................................................................................................................................................................................................................................GCGAACATGGATCTAGTGC...................................................................................................................................................................1911.00110
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGC.......................................................................................................................2011.00101
................................................................................................................................................................................................................................................................................................................................TAGATTTCATGCTCGTCTAT...................................................................................................................2011.00110
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTCTTC...................................................................................................................2411.00110
..............................................................................................................................................................................................................................................................................................................................ACTAGATTTCATGCTCGTC......................................................................................................................1911.00110
..................................................................................................................................................................................................................................................................................CGAACATGGATCTAGTGCA..................................................................................................................................................................1911.00110
...............................................................................................................................................................................................................................................................................CGGCGAACATGGATCTAGTGCA..................................................................................................................................................................2211.00101
................................................................................................................................................................................................................................................................................................................................TAGATTTCATGCTCGTCTA....................................................................................................................1911.00110
...............................................................................................................................................................................................................................................................................................................................CTAGATTTCATGCTCGTCTT....................................................................................................................2011.00110
................................................................................................................................................................................................................................................................................GGCGAACATGGATCTAGTGCAT.................................................................................................................................................................2211.00110
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGA.......................................................................................................................2011.00101
.................................................................................................................................................................................................................................................................................................................................AGATTTCATGCTCGTCTA....................................................................................................................1811.00110
.............................................................................................................................................................................................................................................................................................................................GACTAGATTTCATGCTCG........................................................................................................................1811.00110
................................................................................................................................................................................................................................................................................GGCGAACATGGATCTAGTGCACC................................................................................................................................................................2311.00101
.............................................................................................................................................................................................................................................................................................................................GACTAGATTTCATGCTCGTCTCC...................................................................................................................2311.00110
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTCTATTT.................................................................................................................2611.00110
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTCTAG...................................................................................................................2411.00110
...........................................................................................................................................................................................................................................................................................................................GTGACTAGATTTCATGCTCGTT......................................................................................................................2211.00110
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCGTCTGC...................................................................................................................2411.00110
..................................................................................................................................................................................................................................................................................CGAACATGGATCTAGTGCACT................................................................................................................................................................2111.00110
................................................................................................................................................................................................................................................................................GGCGAACATGGATCTAGTGCACA................................................................................................................................................................2311.00101
.................................................................................................................................................................................................................................................................................GCGAACATGGATCTAGTGCACT................................................................................................................................................................2211.00110
.............................................................................................................................................................................................................................................................................................................................GACTAGATTTCATGCTCGTCA.....................................................................................................................2111.00110
.............................................................................................................................................................................................................................................................................................................................GACTAGATTTCATGCTCGTCTCAA..................................................................................................................2420.50110
............................................................................................................................................................................................................................................................................................................................TGACTAGATTTCATGCTCTCT......................................................................................................................21160.06101

Generated: 10/20/2015 at 07:47 PM