ID:

dan_112

 Coordinate:

scaffold_13337:8471511-8471563 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

No conservation details.

-26.0 -25.3 -25.2

Flybase annnotation

CDS [Dana\GF10179-cds]; exon [dana_GLEANR_10136:1]; Antisense to intron [Dana\GF24303-in]

No Repeatable elements found

mature
  1. dan_111  scaffold_13337:8470276-8470298 +
  2. dan_112  scaffold_13337:8471540-8471562 +
star
  1. dan_111  scaffold_13337:8470247-8470269 +
  2. dan_112  scaffold_13337:8471511-8471533 +

Sense Strand Reads

###------------------------------------------------------------------------------------------------------------------------------------------------------
TAAGAAGTTGCGTTGACGACCCAAAAATAAAACAATGCTTGTGGTGCCCATTCGCCAGCAAAGTTAGCATTGGCTCCCATCACCGATTTTGCGAGGGCATGGGGACCCGTTATATTCCCATTGGGGAACAATTGCTTCTCAGAAACAAATGGA
***********************************.......(((.(((((..(((.((((((((.....(((...))).....))))))))...)))))))).)))..........************************************ 		Read size # Mismatch Hit Count Total Norm Total M058
embryo
 M044
female body
 V039
embryo
 V105
male body		 V055
head
 V106
head
...............................................................................TCACCGATTTTGCGAGGGCATGG................................................... 23 0 2 43.50 87 38 43 4 2 0 0
...............................................................................TCACCGATTTTGCGAGGGCATG.................................................... 22 0 2 20.50 41 19 21 0 1 0 0
........................AAATAAAACAATGCTTGTGGTGCC......................................................................................................... 24 0 2 18.50 37 34 3 0 0 0 0
........................AAATAAAACAATGCTTGTGGTGC.......................................................................................................... 23 0 2 15.50 31 28 3 0 0 0 0
...............................................................................TCACCGATTTTGCGAGGGCATGGG.................................................. 24 0 2 8.00 16 7 8 0 1 0 0
........................AAATAAAACAATGCTTGTGGTGCCC........................................................................................................ 25 0 2 6.00 12 12 0 0 0 0 0
................................................................................CACCGATTTTGCGAGGGCATGG................................................... 22 0 3 4.67 14 1 12 1 0 0 0
.........................AATAAAACAATGCTTGTGGTGCC......................................................................................................... 23 0 2 2.50 5 5 0 0 0 0 0
................................................................................CACCGATTTTGCGAGGGCATGGG.................................................. 23 0 3 2.33 7 1 5 0 1 0 0
...............................................................................TCACCGATTTTGCGAGGGCATGGGG................................................. 25 0 2 2.00 4 1 3 0 0 0 0
...............................................................................TCACCGATTTTGCGAGGGCA...................................................... 20 0 2 2.00 4 2 2 0 0 0 0
........................AAATAAAACAATGCTTGTGGTGCCCA....................................................................................................... 26 0 2 2.00 4 0 4 0 0 0 0
.................................................................................ACCGATTTTGCGAGGGCATGG................................................... 21 0 3 1.67 5 2 3 0 0 0 0
................................................................................CACCGATTTTGCGAGGGCATG.................................................... 21 0 3 1.67 5 2 2 0 0 0 1
.......................................................CAGCAAAGTTAGCATTGGCTCCC........................................................................... 23 0 2 1.50 3 3 0 0 0 0 0
........................AAATAAAACAATGCTTGTGGTG........................................................................................................... 22 0 2 1.50 3 2 1 0 0 0 0
...............................................................................TCACCGATTTTGCGAGGGCATGGGGAC............................................... 27 0 2 1.50 3 0 3 0 0 0 0
............................................................................CCATCACCGATTTTGCGAGGGC....................................................... 22 0 2 1.50 3 0 3 0 0 0 0
...............................................................................TGACCGATTTTGCGAGGGCATGG................................................... 23 1 2 1.50 3 3 0 0 0 0 0
........................AAATAAAACAATGCTTGTGGTGCCCAT...................................................................................................... 27 0 2 1.00 2 0 2 0 0 0 0
........................AAACAAAACAATGCTTGTGGTGCCC........................................................................................................ 25 1 2 1.00 2 2 0 0 0 0 0
........................................................................................................ACCCGTTATATTCCCATTGG............................. 20 0 2 1.00 2 1 0 1 0 0 0
...............................................................................TCACCGATGTTGCGAGGGCATGG................................................... 23 1 2 1.00 2 0 2 0 0 0 0
...............................................................................TCACCGATGTTGCGAGGGCATG.................................................... 22 1 2 1.00 2 0 2 0 0 0 0
..................................................TTCGCCAGCAAAGTTAGCATTGG................................................................................ 23 0 2 1.00 2 0 0 2 0 0 0
...............................................................................TCACCGATTTTGCGAGGGCAT..................................................... 21 0 2 1.00 2 1 0 0 1 0 0
........................................................AGCAAAGTTAGCATTGGCTCCCA.......................................................................... 23 0 2 1.00 2 2 0 0 0 0 0
..................................................TTCGCCAGCAAAGTTAGCATTGGCTCC............................................................................ 27 0 2 1.00 2 1 1 0 0 0 0
.................................................................................ACCGATTTTGCGAGGGCATGGG.................................................. 22 0 3 1.00 3 1 2 0 0 0 0
....................................................................................GATTTTGCGAGGGCATGGGGAC............................................... 22 0 3 1.00 3 1 2 0 0 0 0
..............................................................................ATCACCGATTTTGCGAGGGCATGG................................................... 24 0 2 1.00 2 2 0 0 0 0 0
.......................................................CACCAAAGTTAGCATTGGCTCC............................................................................ 22 1 2 1.00 2 2 0 0 0 0 0
........................AAATAAAACAATGCTTGTGGTGCT......................................................................................................... 24 1 2 1.00 2 2 0 0 0 0 0
...............................................................................TCACCGATTTTGCGAGGGCATGGGGA................................................ 26 0 2 1.00 2 0 2 0 0 0 0
...................................................................................CGATTTTGCGAGGGCATGGGG................................................. 21 0 3 0.67 2 0 2 0 0 0 0
....................................................................................GATTTTGCGAGGGCATGGGGA................................................ 21 0 3 0.67 2 1 0 0 1 0 0
........................AAACAAAACAATGCTTGTGGTGC.......................................................................................................... 23 1 2 0.50 1 1 0 0 0 0 0
........................AAAGAAAACAATGCTTGTGGTGC.......................................................................................................... 23 1 2 0.50 1 1 0 0 0 0 0
........................TAATAAAACAATGCTTGTGGTGCCC........................................................................................................ 25 1 2 0.50 1 1 0 0 0 0 0
...............................................................................TCACCGATATTGCGAGGGCATG.................................................... 22 1 2 0.50 1 0 1 0 0 0 0
...............................................................................TCACCGATTTTGCGAGGGCAGGG................................................... 23 1 2 0.50 1 1 0 0 0 0 0
.......................................................................................TTTGCCATGGCATGGGGACCC............................................. 21 2 2 0.50 1 0 0 1 0 0 0
..................................................TTCGCCAGCAAAGTTAGCATTGGCTCCC........................................................................... 28 0 2 0.50 1 0 1 0 0 0 0
........................AGATAAAACAATGCTTGTGGTGC.......................................................................................................... 23 1 2 0.50 1 1 0 0 0 0 0
........................AAATAAAACAGTGCTTGTGGTGC.......................................................................................................... 23 1 2 0.50 1 1 0 0 0 0 0
....................................................CGCCAGCAAAGTTAGCATTGG................................................................................ 21 0 2 0.50 1 0 0 1 0 0 0
..............................................................................ATCACCGATTTTGCGAGGGCAT..................................................... 22 0 2 0.50 1 0 1 0 0 0 0
...............................................................................TCACCGATTTTGCGAGAGCATGG................................................... 23 1 2 0.50 1 0 0 1 0 0 0
........................AAATAAAACAATGCTTGTGGTGCCT........................................................................................................ 25 1 2 0.50 1 1 0 0 0 0 0
.......................................................CGGCAAAGTTAGCATTGGCTCCC........................................................................... 23 1 2 0.50 1 1 0 0 0 0 0
...............................................................................TGACCGATTTTGCGAGGGCAT..................................................... 21 1 2 0.50 1 1 0 0 0 0 0
........................AAATAAAACAATGCTTGTGGTGT.......................................................................................................... 23 1 2 0.50 1 1 0 0 0 0 0
...............................................................................TCACCGATTTTGCGAGGGAATGGGGAC............................................... 27 1 2 0.50 1 0 0 0 0 1 0
...............................................................................TTACCGATTTTGCGAGGGCATGG................................................... 23 1 2 0.50 1 1 0 0 0 0 0
.......................................................................................TTTGCGAGGGCATGGGGACCCGTT.......................................... 24 0 2 0.50 1 1 0 0 0 0 0
..................................................TTCGCCAGCAAAGTTAGCATTT................................................................................. 22 1 2 0.50 1 0 0 1 0 0 0
........................AAATAAAACAATGCTTGTGGC............................................................................................................ 21 1 2 0.50 1 1 0 0 0 0 0
..............................................................................CTCACCGATTTTGCGAGGGCATGG................................................... 24 1 2 0.50 1 1 0 0 0 0 0
................CGACCCAAAAATAAAACAATGCTT................................................................................................................. 24 0 2 0.50 1 1 0 0 0 0 0
..............................AACAATGCTTGTGGTGCCCATTCGCC................................................................................................. 26 0 2 0.50 1 0 1 0 0 0 0
................CGACCCAAAAATAAAACAATGC................................................................................................................... 22 0 2 0.50 1 1 0 0 0 0 0
........................AAACAAAACACTGCTTGTGGTGC.......................................................................................................... 23 2 2 0.50 1 1 0 0 0 0 0
.......................................................CAGCAAAGTTAGCATTGGCTCTCA.......................................................................... 24 1 2 0.50 1 0 1 0 0 0 0
................................................................................CACCGATTTTGCGAGGGCATGGGGACCC............................................. 28 0 2 0.50 1 0 1 0 0 0 0
..................................................TTCGCCAGTAAAGTTAGCATTGGCTCCC........................................................................... 28 1 2 0.50 1 0 1 0 0 0 0
.........................................................GCAAAGTTAGCATTGGCTCCCATCAC...................................................................... 26 0 2 0.50 1 1 0 0 0 0 0
........................AAATAAAAAAATGCTTGTGGTGC.......................................................................................................... 23 1 2 0.50 1 0 1 0 0 0 0
........................AAATAAAACAATGCTTGTGGTGA.......................................................................................................... 23 1 2 0.50 1 1 0 0 0 0 0
...............................................................................TCACCGATTTTGCGAGGGCATGGGGACC.............................................. 28 0 2 0.50 1 0 1 0 0 0 0
........................AAATAAAACAATGCTTGTGGTGAC......................................................................................................... 24 1 2 0.50 1 1 0 0 0 0 0
........................................................ATCAAAGTTAGCATTGGCTCCCATCACC..................................................................... 28 1 2 0.50 1 1 0 0 0 0 0
...................................................TCGCCAGCAAAGTTAGCATTGGCTCC............................................................................ 26 0 2 0.50 1 0 1 0 0 0 0
..........................................................CAAAGTTAGCATTGGCTCCCATCACC..................................................................... 26 0 2 0.50 1 1 0 0 0 0 0
...........................TAAAACAATGCTTGTGGTGCCC........................................................................................................ 22 0 2 0.50 1 1 0 0 0 0 0
........................................................AGCAAAGTTAGCATTGGCTCCCAT......................................................................... 24 0 2 0.50 1 1 0 0 0 0 0
........................AAATAAAACAATGCTTGTGGGGCC......................................................................................................... 24 1 2 0.50 1 1 0 0 0 0 0
........................AAATAAAAAAATGCTTGTGGTGCC......................................................................................................... 24 1 2 0.50 1 0 1 0 0 0 0
..........................................................CAAAGTTAGCATTGGCTCCC........................................................................... 20 0 2 0.50 1 1 0 0 0 0 0
...............................................................................TCATCGATTTTGCGAGGGCA...................................................... 20 1 2 0.50 1 1 0 0 0 0 0
...................................................TCGCCAGCAAAGTTAGCATTGGCTCCC........................................................................... 27 0 2 0.50 1 0 1 0 0 0 0
........................AAATAAAACAATGCTTGTGGTGCCCAC...................................................................................................... 27 1 2 0.50 1 1 0 0 0 0 0
.........................AATAAAACAATGCTTGTGGTGCCCA....................................................................................................... 25 0 2 0.50 1 1 0 0 0 0 0
.......................................................CAGCAAAGTTAGCATTGGCTCCCA.......................................................................... 24 0 2 0.50 1 1 0 0 0 0 0
...............................................................................TCACCGATCTTGCGAGGGCATGG................................................... 23 1 2 0.50 1 0 1 0 0 0 0
.................................................................................ACCGATTTTGCGAGGGCATGGGGACCCG............................................ 28 0 2 0.50 1 0 1 0 0 0 0
.......................................................CAGCAAAGTTAGCATTGGCTCC............................................................................ 22 0 2 0.50 1 1 0 0 0 0 0
......................AAAAATAAAACAATGCTTGTGGTGC.......................................................................................................... 25 0 2 0.50 1 1 0 0 0 0 0
...............................................................................TCATCGATTTTGCGAGGGCATG.................................................... 22 1 2 0.50 1 1 0 0 0 0 0
........................AAATAAAACAATGCTTGTTGTGCC......................................................................................................... 24 1 2 0.50 1 1 0 0 0 0 0
...............................................................................TCACCGATTTTGCGAGGGCATTA................................................... 23 2 2 0.50 1 1 0 0 0 0 0
........................TAATAAAACAATGCTTGTGGTGCC......................................................................................................... 24 1 2 0.50 1 1 0 0 0 0 0
............................AAAACAATGCTTGTGGTGCCCATTCGCC................................................................................................. 28 0 2 0.50 1 1 0 0 0 0 0
..................................................TGCGCCAGCAAAGTTAGCATTGGCTCCC........................................................................... 28 1 2 0.50 1 1 0 0 0 0 0
............................................................................CCATCACCGATTTTGCGAGGTC....................................................... 22 1 2 0.50 1 0 0 1 0 0 0
........................AAATAAAACAATGCTTGTGG............................................................................................................. 20 0 2 0.50 1 1 0 0 0 0 0
...............................................................................TCACCGATTTTGCGAGGGCATT.................................................... 22 1 2 0.50 1 0 1 0 0 0 0
........................AAAGAAAACAATGCTTGTGGTGCC......................................................................................................... 24 1 2 0.50 1 1 0 0 0 0 0
...............................................................................TTACCGATTTTGCGAGGGCA...................................................... 20 1 2 0.50 1 1 0 0 0 0 0
.........................AATAAAACAATGCTTGTGGTGCCC........................................................................................................ 24 0 2 0.50 1 1 0 0 0 0 0
....................................................................................GATTTTGCGAGGGCATGGGGACCT............................................. 24 1 2 0.50 1 0 1 0 0 0 0
.............................AAACAATGCTTGTGGTGCC......................................................................................................... 19 0 2 0.50 1 1 0 0 0 0 0
....................................................................................GATTTTGCGAGGGCATGGGGACC.............................................. 23 0 2 0.50 1 1 0 0 0 0 0
....................................................................................GATTTTGCGAGGGCATGGGG................................................. 20 0 3 0.33 1 0 1 0 0 0 0
.................................................................................ACCGATTTTGCGAGGGCATG.................................................... 20 0 3 0.33 1 0 1 0 0 0 0
..................................TTGCTTGTGGTGCCCATTCGCC................................................................................................. 22 1 3 0.33 1 1 0 0 0 0 0
................................................................................CGCCGATTTTGCGAGGGCATGGG.................................................. 23 1 3 0.33 1 1 0 0 0 0 0
.....................................................................................ATTTTGCGAGGGCATGGG.................................................. 18 0 3 0.33 1 0 1 0 0 0 0
................................................................................AACCGATTTTGCGAGGGCATGG................................................... 22 1 3 0.33 1 0 1 0 0 0 0
................................................................................CACCGATTGTGCGAGGGCATGG................................................... 22 1 3 0.33 1 0 1 0 0 0 0
................................................................................CACTGATTTTGCGAGGGCATGG................................................... 22 1 3 0.33 1 1 0 0 0 0 0
................................................................................CACCGATTTTGGGAGGGCATGG................................................... 22 1 3 0.33 1 1 0 0 0 0 0
.................................AATGCTTGTGGTGCCCATTCGCC................................................................................................. 23 0 3 0.33 1 0 1 0 0 0 0
...................................................................................CGATTTTGCGAGGGCATGGG.................................................. 20 0 3 0.33 1 0 0 1 0 0 0
................................................................................CACCGATTTTGCGAGGGCA...................................................... 19 0 3 0.33 1 0 1 0 0 0 0
..................................................................................CCGATTTTGCGAGGGCATGG................................................... 20 0 3 0.33 1 0 1 0 0 0 0
...................................................................................CGATTTTGCGAGGGCATGG................................................... 19 0 3 0.33 1 0 0 1 0 0 0
....................................................................................GATTTTGCTAGGGCATGGGGA................................................ 21 1 3 0.33 1 0 1 0 0 0 0
..................................ATGCTTGTGGTGCCCATTCGT.................................................................................................. 21 1 3 0.33 1 0 1 0 0 0 0
..................................ATGCTTGTGGTGCCCATTCGCC................................................................................................. 22 0 3 0.33 1 1 0 0 0 0 0
..............................................................................................................TATATTCCCATTGGGGAACAATTGC.................. 25 0 3 0.33 1 0 0 1 0 0 0
.................................................................................ACCGATTTTGCGAGGGCATGGGG................................................. 23 0 3 0.33 1 0 1 0 0 0 0
.................................................................................ACCGATTTTGCGAGGGCAT..................................................... 19 0 3 0.33 1 0 1 0 0 0 0
..................................ATGCTTGTGGTGCCCATTCGC.................................................................................................. 21 0 3 0.33 1 1 0 0 0 0 0
........................AAATACAACAATGCTTCTCG............................................................................................................. 20 3 20 0.05 1 0 0 1 0 0 0

Anti-sense strand reads

ATTCTTCAACGCAACTGCTGGGTTTTTATTTTGTTACGAACACCACGGGTAAGCGGTCGTTTCAATCGTAACCGAGGGTAGTGGCTAAAACGCTCCCGTACCCCTGGGCAATATAAGGGTAACCCCTTGTTAACGAAGAGTCTTTGTTTACCT
************************************.......(((.(((((..(((.((((((((.....(((...))).....))))))))...)))))))).)))..........*********************************** 		Read size # Mismatch Hit Count Total Norm Total M058
embryo
 M044
female body
 V039
embryo
 V105
male body		 V106
head
 V055
head
..........................................................................................................................CCCCTTGTTAACGAAGAGTCTTTGT...... 25 0 2 499.00 998 846 141 11 0 0 0
..............................................................CAATCGTAACCGAGGGTAGTGGCTAAA................................................................ 27 0 2 375.50 751 521 178 29 18 5 0
...........................................................................................................................CCCTTGTTAACGAAGAGTCTTTGT...... 24 0 2 166.50 333 280 44 6 2 0 1
.............................................................TCAATCGTAACCGAGGGTAGTGGCTAAA................................................................ 28 0 2 149.50 299 223 68 2 5 1 0
......CAACGCAACTGCTGGGTTTTTATTTTGT....................................................................................................................... 28 0 2 114.00 228 140 76 4 7 1 0
..........................................................................................................................CCCCTTGTTAACGAAGAGTCTTTTT...... 25 1 2 110.50 221 221 0 0 0 0 0
........................................................................................................................AACCCCTTGTTAACGAAGAGTCTTTGT...... 27 0 2 86.50 173 52 117 3 1 0 0
..................................................................CGTAACCGAGGGTAGTGGCTAAAAC.............................................................. 25 0 2 42.00 84 48 7 14 14 1 0
.................................................................TCGTAACCGAGGGTAGTGGCTAAA................................................................ 24 0 2 39.00 78 54 17 3 4 0 0
...........................................................................................................................CCCTTGTTAACGAAGAGTCTTTTT...... 24 1 2 37.00 74 74 0 0 0 0 0
........ACGCAACTGCTGGGTTTTTATTTTGT....................................................................................................................... 26 0 2 31.00 62 30 31 1 0 0 0
.........CGCAACTGCTGGGTTTTTATTTTGT....................................................................................................................... 25 0 2 30.50 61 23 24 10 2 2 0
.............................................................CCAATCGTAACCGAGGGTAGTGGCTAAA................................................................ 28 1 2 30.50 61 60 1 0 0 0 0
..........................................................................................................................CCCCTTGTTAACGAAGAGTCTTCGT...... 25 1 2 30.00 60 60 0 0 0 0 0
...............................................................................................CCGTACCCCTGGGCAATATAAGGGT................................. 25 0 2 28.50 57 53 3 1 0 0 0
.........................................................................................................................ACCCCTTGTTAACGAAGAGTCTTTGT...... 26 0 2 25.50 51 19 31 1 0 0 0
....................................CGAACACCACGGGTAAGCGGTCGTTT........................................................................................... 26 0 3 24.33 73 49 21 3 0 0 0
...........................................................................................................................CCCTTGTTAACGAAGAGTCTTTGTT..... 25 0 2 23.50 47 43 3 0 1 0 0
..................................................................CGTAACCGAGGGTAGTGGCTAAA................................................................ 23 0 2 22.50 45 28 11 5 1 0 0
............................................................TTCAATCGTAACCGAGGGTAGTGGCT................................................................... 26 0 2 22.00 44 22 19 3 0 0 0
..........................................CCACGGGTAAGCGGTCGTTTCAAT....................................................................................... 24 0 2 22.00 44 43 1 0 0 0 0
..............................................................................................CCCGTACCCCTGGGCAATATAAGGGT................................. 26 0 2 21.00 42 34 8 0 0 0 0
..............................................................CAATCGTAACCGAGGGTAGTGGCTAA................................................................. 26 0 2 20.50 41 9 25 3 4 0 0
............................................................TTCAATCGTAACCGAGGGTAGTGGCTAAA................................................................ 29 0 2 20.00 40 31 9 0 0 0 0
.........................................ACCACGGGTAAGCGGTCGTTTCAAT....................................................................................... 25 0 2 19.00 38 28 10 0 0 0 0
..............................................................CAATCGTAACCGAGGGTAGTGGCTAAAA............................................................... 28 0 2 18.00 36 22 12 1 1 0 0
...........................................CACGGGTAAGCGGTCGTTTCAAT....................................................................................... 23 0 2 16.50 33 28 4 1 0 0 0
...............................................................AATCGTAACCGAGGGTAGTGGCTAAA................................................................ 26 0 2 16.00 32 21 10 0 0 1 0
......CAACGCAACTGCTGGGTTTTTATTTTTT....................................................................................................................... 28 1 2 15.50 31 30 1 0 0 0 0
.......................................................................................................................TAACCCCTTGTTAACGAAGAGTCTTTGT...... 28 0 2 15.00 30 29 1 0 0 0 0
........................................CACCACGGGTAAGCGGTCGTTTCAAT....................................................................................... 26 0 2 14.50 29 18 10 1 0 0 0
..........................................................................................................................CCCCTTGTTAACGAAGAGTCTTTG....... 24 0 2 13.50 27 8 19 0 0 0 0
.................................................................TCGTAACCGAGGGTAGTGGCTAAAAC.............................................................. 26 0 2 13.00 26 6 10 4 4 2 0
..........................................................................................................................CCCCTTGTTAACGAAGAGTCTTTGTT..... 26 0 2 12.50 25 20 5 0 0 0 0
............................................................................GGTAGTGGCTAAAACGCTCCCGT...................................................... 23 0 2 12.00 24 0 0 22 1 0 1
..................................................................CGTAACCGAGGGTAGTGGCTAAAA............................................................... 24 0 2 12.00 24 13 5 5 1 0 0
.....................................GAACACCACGGGTAAGCGGTCGTTT........................................................................................... 25 0 3 11.33 34 11 22 1 0 0 0
.........................................................................................ACGCTCCCGTACCCCTGGGCAATAT....................................... 25 0 2 11.00 22 2 20 0 0 0 0
..........................................................................................................................CCCCTTGTTAACGAAGAGTCTTCTT...... 25 2 2 10.00 20 20 0 0 0 0 0
..........................................CCACGGGTAAGCGGTCGTTTCAA........................................................................................ 23 0 2 10.00 20 16 3 1 0 0 0
.............................................................TCAATCGTAACCGAGGGTAGTGGCT................................................................... 25 0 2 10.00 20 13 6 1 0 0 0
...................................................................GTAACCGAGGGTAGTGGCTAAAAC.............................................................. 24 0 2 10.00 20 5 6 3 6 0 0
.................................................................CCGTAACCGAGGGTAGTGGCTAAA................................................................ 24 1 2 9.50 19 19 0 0 0 0 0
...........................................................................................................................CCCTTGTTAACGAAGAGTCTTCGT...... 24 1 2 9.50 19 19 0 0 0 0 0
................................................................ATCGTAACCGAGGGTAGTGGCTAAA................................................................ 25 0 2 9.00 18 7 10 1 0 0 0
.......................................ACACCACGGGTAAGCGGTCGTTTCAAT....................................................................................... 27 0 2 9.00 18 1 16 1 0 0 0
.......................................................................CCGAGGGTAGTGGCTAAAACGCT........................................................... 23 0 2 9.00 18 13 2 3 0 0 0
...CTTCAACGCAACTGCTGGGTTTTTAT............................................................................................................................ 26 0 2 9.00 18 11 6 1 0 0 0
..............................................................CAATCGTAACCGAGGGTAGTGGCTAGA................................................................ 27 1 2 8.50 17 17 0 0 0 0 0
........................................................................................................................AACCCCTTGTTAACGAAGAGTCTTTTT...... 27 1 2 8.00 16 16 0 0 0 0 0
........................................................................CGAGGGTAGTGGCTAAAACGCT........................................................... 22 0 2 8.00 16 10 0 6 0 0 0
...........................................................TTTCAATCGTAACCGAGGGTAGTGGCT................................................................... 27 0 2 8.00 16 13 2 0 1 0 0
...............................................................................................CCGTACCCCTGGGCAATATAAGGTT................................. 25 1 2 8.00 16 16 0 0 0 0 0
..............................................................CAATCGTAACCGAGGGTAGTGGCTA.................................................................. 25 0 2 7.50 15 2 10 2 1 0 0
..............................................................................................CCCGTACCCCTGGGCAATATAAGGTT................................. 26 1 2 7.50 15 15 0 0 0 0 0
..TCTTCAACGCAACTGCTGGGTTTTTAT............................................................................................................................ 27 0 2 7.50 15 13 2 0 0 0 0
......................................................GGTCGTTTCAATCGTAACCGAGGGT.......................................................................... 25 0 2 7.00 14 1 1 12 0 0 0
............................................................TTCAATCGTAACCGAGGGTAGTGGCTA.................................................................. 27 0 2 7.00 14 9 5 0 0 0 0
.........CGCAACTGCTGGGTTTTTATTTTTT....................................................................................................................... 25 1 2 7.00 14 14 0 0 0 0 0
....................................CGAACACCACGGGTAAGCGGTCGT............................................................................................. 24 0 3 7.00 21 6 10 5 0 0 0
............................................................................................................................CCTTGTTAACGAAGAGTCTTTGT...... 23 0 2 7.00 14 14 0 0 0 0 0
........................................CACCACGGGTAAGCGGTCGTTTCAA........................................................................................ 25 0 2 7.00 14 10 4 0 0 0 0
..........................................CCACGGGTAAGCGGTCGTTTCAATCGT.................................................................................... 27 0 2 7.00 14 7 7 0 0 0 0
....................................................................TAACCGAGGGTAGTGGCTAAAACGCT........................................................... 26 0 2 6.50 13 6 6 1 0 0 0
.........CGCAACTGCTGGGTTTTTATTTTGTT...................................................................................................................... 26 0 2 6.50 13 10 1 1 0 1 0
.......AACGCAACTGCTGGGTTTTTATTTTGT....................................................................................................................... 27 0 2 6.50 13 8 5 0 0 0 0
...................................ACGAACACCACGGGTAAGCGGTCGTTT........................................................................................... 27 0 3 6.33 19 4 15 0 0 0 0
....................................CGAACACCACGGGTAAGCGGTCGTT............................................................................................ 25 0 3 6.33 19 14 4 1 0 0 0
..........GCAACTGCTGGGTTTTTATTTTGT....................................................................................................................... 24 0 2 6.00 12 2 7 1 2 0 0
...........................................CACGGGTAAGCGGTCGTTTCAATCGT.................................................................................... 26 0 2 6.00 12 9 3 0 0 0 0
................................................................................................................ATAAGGGTAACCCCTTGTTAACGAAG............... 26 0 2 6.00 12 11 0 1 0 0 0
..............................................................CAATCGTAACCGAGGGTAGTGGCTAAAAC.............................................................. 29 0 2 6.00 12 9 2 0 1 0 0
............................................................TTCAATCGTAACCGAGGGTAGTGGCTAA................................................................. 28 0 2 6.00 12 4 8 0 0 0 0
.............................................CGGGTAAGCGGTCGTTTCAATCGT.................................................................................... 24 0 2 6.00 12 7 3 2 0 0 0
.............................................................TCAATCGTAACCGAGGGTAGTGGCTAA................................................................. 27 0 2 6.00 12 5 7 0 0 0 0
..................................................................CGTAACCGAGGGTAGTGGCTAAAACG............................................................. 26 0 2 5.50 11 6 1 3 1 0 0
........ACGCAACTGCTGGGTTTTTATTTTTT....................................................................................................................... 26 1 2 5.50 11 11 0 0 0 0 0
...................................................................GTAACCGAGGGTAGTGGCTAAAACGCT........................................................... 27 0 2 5.50 11 1 9 1 0 0 0
......CAACGCAACTGCTGGGTTTTTATTTCGT....................................................................................................................... 28 1 2 5.50 11 11 0 0 0 0 0
.....................................GAACACCACGGGTAAGCGGTCGT............................................................................................. 23 0 3 5.33 16 2 14 0 0 0 0
...........................................................................................................................CCCTTGTTAACGAAGAGTCTTCTT...... 24 2 2 5.00 10 10 0 0 0 0 0
..................................................................CGTAACCGAGGGTAGTGGCTAAAACGCT........................................................... 28 0 2 5.00 10 2 8 0 0 0 0
...........................................CACGGGTAAGCGGTCGTTTCAA........................................................................................ 22 0 2 4.50 9 8 1 0 0 0 0
.................................................................TCGTAACCGAGGGTAGTGGCTAAAA............................................................... 25 0 2 4.50 9 6 1 2 0 0 0
........................................................TCGTTTCAATCGTAACCGAGGGTAG........................................................................ 25 0 2 4.50 9 8 0 1 0 0 0
............................................................................................................................CCTTGTTAACGAAGAGTCTTTGTT..... 24 0 2 4.50 9 9 0 0 0 0 0
.........................................ACCACGGGTAAGCGGTCGTTTCAATCGT.................................................................................... 28 0 2 4.50 9 1 8 0 0 0 0
..................................TACGAACACCACGGGTAAGCGGTCGTTT........................................................................................... 28 0 3 4.00 12 0 12 0 0 0 0
........................................................................................................................AACCCCTTGTTAACGAAGAGTCTTCGT...... 27 1 2 4.00 8 8 0 0 0 0 0
.....TCAACGCAACTGCTGGGTTTTTATTTTGT....................................................................................................................... 29 0 2 4.00 8 4 4 0 0 0 0
.......................................................GTCGTTTCAATCGTAACCGAGGGTAGT....................................................................... 27 0 2 4.00 8 2 5 1 0 0 0
..............................................GGGTAAGCGGTCGTTTCAATCGTAA.................................................................................. 25 0 2 4.00 8 7 1 0 0 0 0
.............................................CGGGTAAGCGGTCGTTTCAAT....................................................................................... 21 0 2 4.00 8 6 1 0 1 0 0
..................................TACGAACACCACGGGTAAGCGGTCGT............................................................................................. 26 0 3 3.67 11 1 10 0 0 0 0
........................................................................................................................AACCCCTTGTTAACGAAGAGTCTTTG....... 26 0 2 3.50 7 0 7 0 0 0 0
.........................................ACCACGGGTAAGCGGTCGTTTCAA........................................................................................ 24 0 2 3.50 7 5 2 0 0 0 0
.......................TTTTATTTTGTTACGAACACCACGGGT....................................................................................................... 27 0 2 3.50 7 6 1 0 0 0 0
......CAACGCAACTGCTGGGTTTTTATTTT......................................................................................................................... 26 0 2 3.50 7 2 3 1 1 0 0
..........................................................................................................................CCCCTTGTTAACGAAGGGTCTTTGT...... 25 1 2 3.50 7 2 5 0 0 0 0
..............................................GGGTAAGCGGTCGTTTCAAT....................................................................................... 20 0 2 3.50 7 3 3 1 0 0 0
................................................................................................................ATAAGGGTAACCCCTTGTTAACGAAGAGT............ 29 0 2 3.50 7 7 0 0 0 0 0
.............................TTTGTTACGAACACCACGGGTAAGCGGT................................................................................................ 28 0 2 3.50 7 3 4 0 0 0 0
......CAACGCAACTGCTGGGTTTTTATTTTG........................................................................................................................ 27 0 2 3.50 7 1 6 0 0 0 0
.....................................................................AACCGAGGGTAGTGGCTAAAACGCT........................................................... 25 0 2 3.50 7 4 1 0 2 0 0
............................................................................................CTCCCGTACCCCTGGGCAATATAAGGGT................................. 28 0 2 3.50 7 2 5 0 0 0 0
...........................................................................................................................CCCTTGTTAACGAAGAGTCTTTG....... 23 0 2 3.50 7 1 6 0 0 0 0
......CAACGCAACTGCTGGGTTTTTATTTCTT....................................................................................................................... 28 2 2 3.50 7 7 0 0 0 0 0
..........................................CCACGGGTAAGCGGTCGTTT........................................................................................... 20 0 3 3.33 10 10 0 0 0 0 0
.............................................................TCAATCGTAACCGAGGGTAGTGGCTAGA................................................................ 28 1 2 3.00 6 6 0 0 0 0 0
..................................................................................................................AAGGGTAACCCCTTGTTAACGAAGAGTCT.......... 29 0 2 3.00 6 6 0 0 0 0 0
..........................................................................................................................CCCCTTGTTAACGAAGAGTCTGTGT...... 25 1 2 3.00 6 6 0 0 0 0 0
...........................................CACGGGTAAGCGGTCGTTTCAATCGTAA.................................................................................. 28 0 2 3.00 6 4 1 1 0 0 0
................................GTTACGAACACCACGGGTAAGCGGTCGT............................................................................................. 28 0 3 3.00 9 0 9 0 0 0 0
..............................................................CAATCGTAACCGAGGGTAGTGGCCAAA................................................................ 27 1 2 3.00 6 6 0 0 0 0 0
..............................................................CAATCGTAACCGAGGGTAGTGGCT................................................................... 24 0 2 3.00 6 4 0 2 0 0 0
...................GGGTTTTTATTTTGTTACGAACACCAC........................................................................................................... 27 0 2 3.00 6 6 0 0 0 0 0
....................................CGAACACCACGGGTAAGCGGTCGTGT........................................................................................... 26 1 3 2.67 8 8 0 0 0 0 0
.....................................GAACACCACGGGTAAGCGGTCGTT............................................................................................ 24 0 3 2.67 8 1 7 0 0 0 0
.........................................ACCACGGGTAAGCGGTCGTTT........................................................................................... 21 0 3 2.67 8 6 2 0 0 0 0
..................................................................................................TACCCCTGGGCAATATAAGGGTAAC.............................. 25 0 2 2.50 5 5 0 0 0 0 0
..............................................GGGTAAGCGGTCGTTTCAATCGTAAC................................................................................. 26 0 2 2.50 5 2 2 1 0 0 0
....................................................................TAACCGAGGGTAGTGGCTAAAAC.............................................................. 23 0 2 2.50 5 3 2 0 0 0 0
..........................................................................................................................CCCCTTGTTAACGACGAGTCTTTGT...... 25 1 2 2.50 5 5 0 0 0 0 0
.............................................................TCAATCGTAACCGAGGGTAGTGGCTA.................................................................. 26 0 2 2.50 5 4 0 1 0 0 0
..........GCAACTGCTGGGTTTTTATTTTGTT...................................................................................................................... 25 0 2 2.50 5 1 4 0 0 0 0
.................................................................TCGTAACCGAGGGTAGTGGCTAAAACG............................................................. 27 0 2 2.50 5 0 1 1 3 0 0
..............................TTGTTACGAACACCACGGGTAAGCGGT................................................................................................ 27 0 2 2.50 5 2 3 0 0 0 0
...........................................................................................GCTCCCGTACCCCTGGGCAATATAAGGGT................................. 29 0 2 2.50 5 1 4 0 0 0 0
........................................................................................................................AACCCCTTGTTAACGAAGAGTCTTT........ 25 0 2 2.50 5 3 2 0 0 0 0
.......................................................................................................................TAACCCCTTGTTAACGAAGAGTCTTTTT...... 28 1 2 2.50 5 5 0 0 0 0 0
..........................................................................................................................CCCCTTGTTAACGAAGAGTC........... 20 0 2 2.50 5 4 1 0 0 0 0
...............................TGTTACGAACACCACGGGTAAGCGGT................................................................................................ 26 0 2 2.50 5 1 4 0 0 0 0
............................................................................................................................CCTTGTTAACGAAGAGTCTTTTT...... 23 1 2 2.50 5 5 0 0 0 0 0
.......................................ACACCACGGGTAAGCGGTCGTTTCAA........................................................................................ 26 0 2 2.50 5 1 4 0 0 0 0
..............................................................CAATCGTAACCGAGGGTAGTGGCGAAA................................................................ 27 1 2 2.50 5 5 0 0 0 0 0
..........................................................................................................................CCCCTTGTTAACGAAGAGTCTTTGTC..... 26 1 2 2.50 5 5 0 0 0 0 0
..............................................................CAATCGTAACCGAGGGTAGTGGCAAAA................................................................ 27 1 2 2.50 5 5 0 0 0 0 0
...............................................GGTAAGCGGTCGTTTCAATCGT.................................................................................... 22 0 2 2.50 5 0 4 1 0 0 0
.......................................................................................................................CAACCCCTTGTTAACGAAGAGTCTTTGT...... 28 1 2 2.50 5 5 0 0 0 0 0
.........................................................................................................................ACCCCTTGTTAACGAAGAGTCTTTTT...... 26 1 2 2.50 5 5 0 0 0 0 0
.............................................................................................TCCCGTACCCCTGGGCAATATAAGGGT................................. 27 0 2 2.50 5 3 2 0 0 0 0
........................................................TCGTTTCAATCGTAACCGAGGGTAGT....................................................................... 26 0 2 2.50 5 4 0 1 0 0 0
........................................CACCACGGGTAAGCGGTCGTTT........................................................................................... 22 0 3 2.33 7 4 3 0 0 0 0
..........................................................................................................................CCCCTTGTTAACGAAGAGTCTGTTT...... 25 2 2 2.00 4 4 0 0 0 0 0
..............................................................................TAGTGGCTAAAACGCTCCCGTACCCCT................................................ 27 0 2 2.00 4 1 3 0 0 0 0
......................................................................................................CCTGGGCAATATAAGGGTAACCCCTT......................... 26 0 2 2.00 4 4 0 0 0 0 0
.............................................................CCAATCGTAACCGAGGGTAGTGGCTAA................................................................. 27 1 2 2.00 4 4 0 0 0 0 0
............................................ACGGGTAAGCGGTCGTTTCAAT....................................................................................... 22 0 2 2.00 4 2 2 0 0 0 0
........................................................................................AACGCTCCCGTACCCCTGGGCAATAT....................................... 26 0 2 2.00 4 0 4 0 0 0 0
.....TCAACGCAACTGCTGGGTTTTTATTT.......................................................................................................................... 26 0 2 2.00 4 4 0 0 0 0 0
.....................................................................................................................GGTAACCCCTTGTTAACGAAGAGTCTT......... 27 0 2 2.00 4 1 1 2 0 0 0
..........................................................................................................................CCCCTTGTTACCGAAGAGTCTTTGT...... 25 1 2 2.00 4 4 0 0 0 0 0
...................................ACGAACACCACGGGTAAGCGGTCGTT............................................................................................ 26 0 3 2.00 6 3 3 0 0 0 0
...........................................................................................................................CCCTTGTTAACGAAGAGTCTTTGGT..... 25 1 2 2.00 4 4 0 0 0 0 0
......................................................................................................................GTAACCCCTTGTTAACGAAGAGTCTTTGT...... 29 0 2 2.00 4 1 3 0 0 0 0
................................................................................GTGGCTAAAACGCTCCCGTACCCCT................................................ 25 0 3 2.00 6 3 3 0 0 0 0
.............................................................ACAATCGTAACCGAGGGTAGTGGCTAAA................................................................ 28 1 2 2.00 4 0 4 0 0 0 0
..............................................................CAATCGTAACCGAGGGTAGTGTCTAAA................................................................ 27 1 2 2.00 4 2 0 1 1 0 0
.......................................................................................................................CAACCCCTTGTTAACGAAGAGTCTTTTT...... 28 2 2 2.00 4 4 0 0 0 0 0
..................................TACGAACACCACGGGTAAGCGGTCGTT............................................................................................ 27 0 3 2.00 6 0 6 0 0 0 0
.............................................................TCAATCGTAACCGAGGGTAGTGGCGAAA................................................................ 28 1 2 2.00 4 4 0 0 0 0 0
...............TGCTGGGTTTTTATTTTGTTACGAACA............................................................................................................... 27 0 2 2.00 4 4 0 0 0 0 0
.......................................................GTCGTTTCAATCGTAACCGAGGGT.......................................................................... 24 0 2 2.00 4 0 0 4 0 0 0
..............................................................................................CCCGTACCCCTGGGCAATATAAGGG.................................. 25 0 2 2.00 4 2 2 0 0 0 0
......................................................................ACCGAGGGTAGTGGCTAAAACGCT........................................................... 24 0 2 2.00 4 0 1 1 2 0 0
.............................................................CCAATCGTAACCGAGGGTAGTGGCT................................................................... 25 1 2 2.00 4 4 0 0 0 0 0
.........................................ACCACGGGTAAGCGGTCGTTTCAATCG..................................................................................... 27 0 2 2.00 4 3 1 0 0 0 0
......................................................................................AAAACGCTCCCGTACCCCTGGGCAATAT....................................... 28 0 2 2.00 4 0 4 0 0 0 0
........ACGCAACTGCTGGGTTTTTATTTTG........................................................................................................................ 25 0 2 2.00 4 0 4 0 0 0 0
..........................................CCACGGGTAAGCGGTCGTTTTAAT....................................................................................... 24 1 2 2.00 4 4 0 0 0 0 0
.................................TTACGAACACCACGGGTAAGCGGTCGT............................................................................................. 27 0 3 2.00 6 1 5 0 0 0 0
.......................................................................CCGAGGGTAGTGGCTAAA................................................................ 18 0 2 2.00 4 2 2 0 0 0 0
.......................................................................CCGAGGGTAGTGGCTAAAACGCTC.......................................................... 24 0 2 2.00 4 4 0 0 0 0 0
..........................................................................................................................CCCCTTGTTAACGAAGAGTGTTTGT...... 25 1 2 2.00 4 4 0 0 0 0 0
...............................................................................AGTGGCTAAAACGCTCCCGTACCCCT................................................ 26 0 2 2.00 4 2 1 1 0 0 0
..............................................GGGTAAGCGGTCGTTTCAATCGT.................................................................................... 23 0 2 2.00 4 2 2 0 0 0 0
..........................................................................................................................GCCCTTGTTAACGAAGAGTCTTTGT...... 25 1 2 2.00 4 4 0 0 0 0 0
..............................................................................................................................TTGTTAACGAAGAGTCTTTGT...... 21 0 2 2.00 4 4 0 0 0 0 0
..............................................................CAATCGTAACCGAGGGTAATGGCTAAA................................................................ 27 1 2 2.00 4 0 4 0 0 0 0
......CAACGCAACTGCTGGGTTTGTATTTTGT....................................................................................................................... 28 1 2 2.00 4 0 4 0 0 0 0
.................................................................CCGTAACCGAGGGTAGTGGCTAAAA............................................................... 25 1 2 2.00 4 4 0 0 0 0 0
...................................................................GTAACCGAGGGTAGTGGCTAAA................................................................ 22 0 2 2.00 4 2 2 0 0 0 0
..........................................................................................................................CCCCTTGTTAACGAAGAGTCTTTGGT..... 26 1 2 2.00 4 4 0 0 0 0 0
..............................................................CAATCGTAACCGAGGGTAGTGGCTATA................................................................ 27 1 2 2.00 4 4 0 0 0 0 0
..................................AACGAACACCACGGGTAAGCGGTCGTTT........................................................................................... 28 1 3 1.67 5 1 4 0 0 0 0
..........................................................................................................................CCCCTTGTTAACGAAGAGTCTTTAT...... 25 1 2 1.50 3 3 0 0 0 0 0
.......................................................................................................................TAACCCCTTGTTAACGAAGAGTCTTT........ 26 0 2 1.50 3 2 0 1 0 0 0
.................................................................CCGTAACCGAGGGTAGTGGCTAAAAC.............................................................. 26 1 2 1.50 3 3 0 0 0 0 0
.............................................................TCAATCGTAACCGAGGGTAGTGGCTAAAA............................................................... 29 0 2 1.50 3 3 0 0 0 0 0
.........................................................CGTTTCAATCGTAACCGAGGGTAG........................................................................ 24 0 2 1.50 3 1 2 0 0 0 0
............................................................................GGTAGTGGCTAAAACGCTCCCGTAC.................................................... 25 0 2 1.50 3 0 1 2 0 0 0
..........................................................................................................................CCCATTGTTAACGAAGAGTCTTTGT...... 25 1 2 1.50 3 3 0 0 0 0 0
................................................GTAAGCGGTCGTTTCAATCGTAACC................................................................................ 25 0 2 1.50 3 0 3 0 0 0 0
................................................................................................................ATAAGGGTAACCCCTTGTTAACGAA................ 25 0 2 1.50 3 2 0 1 0 0 0
......CAACGCAACTGCTGGGTTTTTAT............................................................................................................................ 23 0 2 1.50 3 2 1 0 0 0 0
........................................CACCACGGGTAAGCGGTCGTTTCAATCGT.................................................................................... 29 0 2 1.50 3 0 3 0 0 0 0
.....................................................................................................................GGTAACCCCTTGTTAACGAAGAGTCT.......... 26 0 2 1.50 3 2 0 1 0 0 0
.........................................................................................................................ACCCCTTGTTAACGAAGAGTCTTCGT...... 26 1 2 1.50 3 3 0 0 0 0 0
..............................................................AAATCGTAACCGAGGGTAGTGGCTAAA................................................................ 27 1 2 1.50 3 1 0 1 1 0 0
.............................TTTGTTACGAACACCACGGGTAAGCGG................................................................................................. 27 0 2 1.50 3 1 2 0 0 0 0
..................................................................CGTAACCGAGGGTAGTGGCTAGA................................................................ 23 1 2 1.50 3 3 0 0 0 0 0
.......................................................................CCGAGGGTAGTGGCTAAAACGC............................................................ 22 0 2 1.50 3 2 1 0 0 0 0
..........................................................................................................................CCCCTTGTTAACGAAGAGTCTCTGT...... 25 1 2 1.50 3 3 0 0 0 0 0
.............................................................................GTAGTGGCTAAAACGCTCCCGTACCCCT................................................ 28 0 2 1.50 3 1 1 0 1 0 0
........................................................CCGTTTCAATCGTAACCGAGGGTAGT....................................................................... 26 1 2 1.50 3 3 0 0 0 0 0
..............................................................CAATCGTAACCGGGGGTAGTGGCTAAA................................................................ 27 1 2 1.50 3 2 1 0 0 0 0
...................................................................GTAACCGAGGGTAGTGGCTAAAACG............................................................. 25 0 2 1.50 3 1 1 0 1 0 0
...........CAACTGCTGGGTTTTTATTTTGT....................................................................................................................... 23 0 2 1.50 3 1 1 1 0 0 0
............................................ACGGGTAAGCGGTCGTTTCAATCGT.................................................................................... 25 0 2 1.50 3 2 1 0 0 0 0
........................................................................................................................AACCCCTTGTTAACGAAGGGTCTTTGT...... 27 1 2 1.50 3 0 3 0 0 0 0
.....TCAACGCAACTGCTGGGTTTTTATT........................................................................................................................... 25 0 2 1.50 3 3 0 0 0 0 0
.........................................................................................................GGGCAATATAAGGGTAACCCCTTGT....................... 25 0 2 1.50 3 1 2 0 0 0 0
...............................................................................................CCGTACCCCTGGGCAATATAAGGGTAA............................... 27 0 2 1.50 3 3 0 0 0 0 0
..........................................................................................................................CCCCTTGTTAACGAAGAGTCTTT........ 23 0 2 1.50 3 2 1 0 0 0 0
........................................................CCGTTTCAATCGTAACCGAGGGTAG........................................................................ 25 1 2 1.50 3 3 0 0 0 0 0
.......................TTTTATTTTGTTACGAACACCACGGTT....................................................................................................... 27 1 2 1.50 3 3 0 0 0 0 0
..............................................................CAATCGTAACCGAGGGTAGCGGCTAAA................................................................ 27 1 2 1.50 3 3 0 0 0 0 0
....................................................................................................................GGGTAACCCCTTGTTAACGAAGAGTCTT......... 28 0 2 1.50 3 0 3 0 0 0 0
...........................................................................................................................CCCTTGTTAACGAAGAGTCTGTGT...... 24 1 2 1.50 3 3 0 0 0 0 0
..........................................................................AGGGTAGTGGCTAAAACGCT........................................................... 20 0 2 1.50 3 0 2 1 0 0 0
.......................................................................CCGAGGGTAGTGGCTAAAACG............................................................. 21 0 2 1.50 3 2 0 0 1 0 0
.....CCAACGCAACTGCTGGGTTTTTATTTTGT....................................................................................................................... 29 1 2 1.50 3 3 0 0 0 0 0
...........................................................................................................................CCCTTGTTAACGAAGAGTCTGTTT...... 24 2 2 1.50 3 3 0 0 0 0 0
......CAACGCAACTGCTGGGTTTTTATTTTGTT...................................................................................................................... 29 0 2 1.50 3 3 0 0 0 0 0
..........................................CCACGGGTAAGCGGTCGTTTCAATCG..................................................................................... 26 0 2 1.50 3 2 1 0 0 0 0
.........CGCAACTGCTGGGTTTTTATTTTG........................................................................................................................ 24 0 2 1.50 3 0 3 0 0 0 0
..........................................................................................................................CCCCTTGTTAACGAAGAGTCTTTCT...... 25 1 2 1.50 3 3 0 0 0 0 0
..............................................................CAATCGTAACCGAGGGTAGTGGCTAAG................................................................ 27 1 2 1.50 3 2 1 0 0 0 0
...............TGCTGGGTTTTTATTTTGTTACGAA................................................................................................................. 25 0 2 1.50 3 3 0 0 0 0 0
................................GTTACGAACACCACGGGTAAGCGGTCG.............................................................................................. 27 0 3 1.33 4 1 3 0 0 0 0
.......................................ACACCACGGGTAAGCGGTCGT............................................................................................. 21 0 3 1.33 4 0 4 0 0 0 0
....................................CGAACACCACGGGTAAGCGGT................................................................................................ 21 0 3 1.33 4 2 0 2 0 0 0
.......................................ACACCACGGGTAAGCGGTCGTTT........................................................................................... 23 0 3 1.33 4 0 4 0 0 0 0
..........................................CCACGGGTAAGCGGTCGTTTCATT....................................................................................... 24 1 3 1.33 4 4 0 0 0 0 0
..............................................................CAATCGTAACCGAGGCTAGTGGCTAAA................................................................ 27 1 2 1.00 2 1 0 0 1 0 0
..................................................................CGTAACCGAGGGTAGTGGCT................................................................... 20 0 2 1.00 2 0 0 1 1 0 0
.......................................................................................................................AAACCCCTTGTTAACGAAGAGTCTTTGT...... 28 1 2 1.00 2 2 0 0 0 0 0
...................................ACGAACACCACGGGTAAGCGGTCGT............................................................................................. 25 0 3 1.00 3 1 2 0 0 0 0
..............................................................CAACCGTAACCGAGGGTAGTGGCTAAA................................................................ 27 1 2 1.00 2 1 0 0 1 0 0
.................CTGGGTTTTTATTTTGTTACGAACA............................................................................................................... 25 0 2 1.00 2 1 1 0 0 0 0
........................TTTATTTTGTTACGAACACCACGGTT....................................................................................................... 26 1 2 1.00 2 2 0 0 0 0 0
.............................................................CCAATCGTAACCGCGGGTAGTGGCTAAA................................................................ 28 2 2 1.00 2 2 0 0 0 0 0
...........................................CACGGGTAAGCGGTCGTTTCAACCGT.................................................................................... 26 1 2 1.00 2 2 0 0 0 0 0
...........................................CACGGGTAAGCGGTCGTGT........................................................................................... 19 1 3 1.00 3 3 0 0 0 0 0
...................................................................GTAACCGAGGGTAGTGGCTAA................................................................. 21 0 2 1.00 2 0 2 0 0 0 0
..........................................................................................................................CCCCTTGTTAACGAAGAGTCTTTGC...... 25 1 2 1.00 2 2 0 0 0 0 0
.............................................CGGGTAAGCGGTCGTTTCAATCGTAA.................................................................................. 26 0 2 1.00 2 1 1 0 0 0 0
..............CTGCTGGGTTTTTATTTTGTTACGAAC................................................................................................................ 27 0 2 1.00 2 2 0 0 0 0 0
..............................................................CAATCTTAACCGAGGGTAGTGGCTAAA................................................................ 27 1 2 1.00 2 1 0 1 0 0 0
.............................................................CCAATCGTAACCGAGGGTAGTGGCTAGA................................................................ 28 2 2 1.00 2 2 0 0 0 0 0
....................................................................TAACCGAGGGTAGTGGCTAAAA............................................................... 22 0 2 1.00 2 2 0 0 0 0 0
..........................................................................................................................CCCCTTGCTAACGAAGAGTCTTTGT...... 25 1 2 1.00 2 2 0 0 0 0 0
..........................................................................................................................CCCCTTGTTAACGAAGAGTCTTTT....... 24 1 2 1.00 2 2 0 0 0 0 0
..........................................................................................................................CCCCTAGTTAACGAAGAGTCTTTGT...... 25 1 2 1.00 2 1 1 0 0 0 0
..................................CACGAACACCACGGGTAAGCGGTCGTTT........................................................................................... 28 1 3 1.00 3 3 0 0 0 0 0
......CAACGCAACCGCTGGGTTTTTATTTTGT....................................................................................................................... 28 1 2 1.00 2 1 1 0 0 0 0
.....CCAACGCAACTGCTGGGTTTTTATTT.......................................................................................................................... 26 1 2 1.00 2 2 0 0 0 0 0
..................TGGGTTTTTATTTTGTTACGAAC................................................................................................................ 23 0 2 1.00 2 2 0 0 0 0 0
.........................................................CGTTTCAATCGTAACCGAGGGTAGTG...................................................................... 26 0 2 1.00 2 0 1 1 0 0 0
..........................................................................................................................CCCCTTGTTAACGAAGAGTCTATGT...... 25 1 2 1.00 2 2 0 0 0 0 0
..............................................................CAATCGTAACCGAGGGTAGTGGCTTAA................................................................ 27 1 2 1.00 2 0 0 0 0 2 0
......CAACGCAACTGCTGGGTTTTTATTGT......................................................................................................................... 26 1 2 1.00 2 2 0 0 0 0 0
..............................................................CAATCGTAACCGAGGGTATTGGCTAAA................................................................ 27 1 2 1.00 2 0 2 0 0 0 0
.................................................................................TGGCTAAAACGCTCCCGTACCCCT................................................ 24 0 3 1.00 3 1 2 0 0 0 0
......................................................................................................CCTGGGCAATATAAGGGTAACCCCT.......................... 25 0 2 1.00 2 2 0 0 0 0 0
.......................................................GTCGTTTCAATCGTAACCGAGGGTAG........................................................................ 26 0 2 1.00 2 0 1 1 0 0 0
........................TTTATTTTGTTACGAACACCACGGGT....................................................................................................... 26 0 2 1.00 2 2 0 0 0 0 0
......CAACGCAACTGCTGTGTTTTTATTTTGT....................................................................................................................... 28 1 2 1.00 2 0 0 2 0 0 0
..........GCAACTGCTGGGTTTTTATTTTTT....................................................................................................................... 24 1 2 1.00 2 2 0 0 0 0 0
.................................................................CCGTAACCGAGGGTAGTGGCTAGA................................................................ 24 2 2 1.00 2 2 0 0 0 0 0
.........................TTATTTTGTTACGAACACCACGGGT....................................................................................................... 25 0 2 1.00 2 2 0 0 0 0 0
...........................................................................................................................CACTTGTTAACGAAGAGTCTTTGT...... 24 1 2 1.00 2 2 0 0 0 0 0
...........................................................................................................................CCCTTGTTAACGACGAGTCTTCGT...... 24 2 2 1.00 2 2 0 0 0 0 0
......................................................................TCCGAGGGTAGTGGCTAAAACGCT........................................................... 24 1 2 1.00 2 2 0 0 0 0 0
..................TGGGTTTTTATTTTGTTACGAACACC............................................................................................................. 26 0 2 1.00 2 1 1 0 0 0 0
................................GTTACGAACACCACGGGTAAGCGGT................................................................................................ 25 0 3 1.00 3 1 2 0 0 0 0
......................................AACACCACGGGTAAGCGGTCGTTT........................................................................................... 24 0 3 1.00 3 2 1 0 0 0 0
...........................................................................................................................CCCTTGTTAACGAAGAGTCTCTGT...... 24 1 2 1.00 2 2 0 0 0 0 0
....................................CGAACACCACGGGTAAGCGGTCTTTT........................................................................................... 26 1 3 1.00 3 3 0 0 0 0 0
..........................................CCACGGGTAAGCGGTCGTTTCAATCTT.................................................................................... 27 1 2 1.00 2 2 0 0 0 0 0
..............................................................CAATCGTAACCGAGGGTAGTTGCTAAA................................................................ 27 1 2 1.00 2 2 0 0 0 0 0
...........................................CACGGGTAAGCGGTCGTTT........................................................................................... 19 0 3 1.00 3 3 0 0 0 0 0
..........................................................................................................................CCCCTTGTTAACGAAGAGTCTCTTT...... 25 2 2 1.00 2 2 0 0 0 0 0
......CAACGCCACTGCTGGGTTTTTATTTTTT....................................................................................................................... 28 2 2 1.00 2 2 0 0 0 0 0
.......................................................................................................................TAACCCCTTGTTAACGAAGAGTCTTCGT...... 28 1 2 1.00 2 2 0 0 0 0 0
......................................................GGTCTTTTCAATCGTAACCGAGGGT.......................................................................... 25 1 2 1.00 2 0 0 2 0 0 0
..........................................................................................CGCTCCCGTACCCCTGGGCAATAT....................................... 24 0 2 1.00 2 0 2 0 0 0 0
......................................AACACCACGGGTAAGCGGTCGTTTCAAT....................................................................................... 28 0 2 1.00 2 0 2 0 0 0 0
.........CGCAACTGCTGGGTTTTTATTTCGT....................................................................................................................... 25 1 3 1.00 3 3 0 0 0 0 0
...........................................................................................................................CCCTTGTTAACGAAGAGTCTATGT...... 24 1 2 1.00 2 2 0 0 0 0 0
........................................................................................................................AACCCCTTGTTAACGAAGAGTCTATGT...... 27 1 2 1.00 2 2 0 0 0 0 0
.............................................................TCAATCGTAACCGAGGGTAGTGGCAAAA................................................................ 28 1 2 1.00 2 2 0 0 0 0 0
............AACTGCTGGGTTTTTATTTTGT....................................................................................................................... 22 0 2 1.00 2 0 2 0 0 0 0
.................................TTACGAACACCACGGGTAAGCGGT................................................................................................ 24 0 3 1.00 3 3 0 0 0 0 0
..........................................CCACGGGTAAGCGGTCGTTTCAATCGTC................................................................................... 28 1 2 1.00 2 1 1 0 0 0 0
........ACGCAACTGCTGGGTTTGTATTTTGT....................................................................................................................... 26 1 2 1.00 2 0 2 0 0 0 0
..............................................................CAATCGTAACCGAGTGTAGTGGCTAAA................................................................ 27 1 2 1.00 2 0 0 2 0 0 0
....TTCAACGCAACTGCTGGGTTTTTATTT.......................................................................................................................... 27 0 2 1.00 2 0 2 0 0 0 0
..................................................................................................................AAGGGTAACCCCTTGTTAACGAAGAGT............ 27 0 2 1.00 2 1 1 0 0 0 0
......CAACTCAACTGCTGGGTTTTTATTTTGT....................................................................................................................... 28 1 2 1.00 2 2 0 0 0 0 0
...............................................................AATCGTAACCGAGGGTAGTGGCTAA................................................................. 25 0 2 1.00 2 0 2 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droAna3 scaffold_13337:8471461-8471613 + dan_112 TAAGAAGTTGCGTTGACGACCCAAAAATAAAACAATGCTTGTGGTGCCCATTCGCCAGCAAAGTTAGCATTGGCTCCCATCACCGATTTTGCGAGGGCATGGGGACCCGTTATATTCCCATTGGGGAACAATTGCTTCTCAGAAACAAATGGA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droAna3
TAAGAAGTTGCGTTGACGACCCAAAAATAAAACAATGCTTGTGGTGCCCATTCGCCAGCAAAGTTAGCATTGGCTCCCATCACCGATTTTGCGAGGGCATGGGGACCCGTTATATTCCCATTGGGGAACAATTGCTTCTCAGAAACAAATGGASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
...............................................................................TCACCGATTTTGCGAGGGCATGG...................................................23243.508743384020
...............................................................................TCACCGATTTTGCGAGGGCATG....................................................22220.504121190010
........................AAATAAAACAATGCTTGTGGTGCC.........................................................................................................24218.50373340000
........................AAATAAAACAATGCTTGTGGTGC..........................................................................................................23215.50313280000
...............................................................................TCACCGATTTTGCGAGGGCATGGG..................................................2428.0016870010
........................AAATAAAACAATGCTTGTGGTGCCC........................................................................................................2526.00120120000
................................................................................CACCGATTTTGCGAGGGCATGG...................................................2234.67141211000
.........................AATAAAACAATGCTTGTGGTGCC.........................................................................................................2322.505050000
................................................................................CACCGATTTTGCGAGGGCATGGG..................................................2332.337510010
...............................................................................TCACCGATTTTGCGAGGGCATGGGG.................................................2522.004310000
...............................................................................TCACCGATTTTGCGAGGGCA......................................................2022.004220000
........................AAATAAAACAATGCTTGTGGTGCCCA.......................................................................................................2622.004400000
.................................................................................ACCGATTTTGCGAGGGCATGG...................................................2131.675320000
................................................................................CACCGATTTTGCGAGGGCATG....................................................2131.675220001
.......................................................CAGCAAAGTTAGCATTGGCTCCC...........................................................................2321.503030000
........................AAATAAAACAATGCTTGTGGTG...........................................................................................................2221.503120000
...............................................................................TCACCGATTTTGCGAGGGCATGGGGAC...............................................2721.503300000
............................................................................CCATCACCGATTTTGCGAGGGC.......................................................2221.503300000
........................AAATAAAACAATGCTTGTGGTGCCCAT......................................................................................................2721.002200000
........................................................................................................ACCCGTTATATTCCCATTGG.............................2021.002011000
..................................................TTCGCCAGCAAAGTTAGCATTGG................................................................................2321.002002000
...............................................................................TCACCGATTTTGCGAGGGCAT.....................................................2121.002010010
........................................................AGCAAAGTTAGCATTGGCTCCCA..........................................................................2321.002020000
..................................................TTCGCCAGCAAAGTTAGCATTGGCTCC............................................................................2721.002110000
.................................................................................ACCGATTTTGCGAGGGCATGGG..................................................2231.003210000
....................................................................................GATTTTGCGAGGGCATGGGGAC...............................................2231.003210000
..............................................................................ATCACCGATTTTGCGAGGGCATGG...................................................2421.002020000
........................AAATAAAACAATGCTTGTGGTGCT.........................................................................................................2421.002020000
...............................................................................TCACCGATTTTGCGAGGGCATGGGGA................................................2621.002200000
...................................................................................CGATTTTGCGAGGGCATGGGG.................................................2130.672200000
....................................................................................GATTTTGCGAGGGCATGGGGA................................................2130.672010010
..................................................TTCGCCAGCAAAGTTAGCATTGGCTCCC...........................................................................2820.501100000
....................................................CGCCAGCAAAGTTAGCATTGG................................................................................2120.501001000
..............................................................................ATCACCGATTTTGCGAGGGCAT.....................................................2220.501100000
........................AAATAAAACAATGCTTGTGGTGCCT........................................................................................................2520.501010000
........................AAATAAAACAATGCTTGTGGTGT..........................................................................................................2320.501010000
.......................................................................................TTTGCGAGGGCATGGGGACCCGTT..........................................2420.501010000
..................................................TTCGCCAGCAAAGTTAGCATTT.................................................................................2220.501001000
........................AAATAAAACAATGCTTGTGGC............................................................................................................2120.501010000
................CGACCCAAAAATAAAACAATGCTT.................................................................................................................2420.501010000
..............................AACAATGCTTGTGGTGCCCATTCGCC.................................................................................................2620.501100000
................CGACCCAAAAATAAAACAATGC...................................................................................................................2220.501010000
................................................................................CACCGATTTTGCGAGGGCATGGGGACCC.............................................2820.501100000
.........................................................GCAAAGTTAGCATTGGCTCCCATCAC......................................................................2620.501010000
........................AAATAAAACAATGCTTGTGGTGA..........................................................................................................2320.501010000
...............................................................................TCACCGATTTTGCGAGGGCATGGGGACC..............................................2820.501100000
...................................................TCGCCAGCAAAGTTAGCATTGGCTCC............................................................................2620.501100000
..........................................................CAAAGTTAGCATTGGCTCCCATCACC.....................................................................2620.501010000
...........................TAAAACAATGCTTGTGGTGCCC........................................................................................................2220.501010000
........................................................AGCAAAGTTAGCATTGGCTCCCAT.........................................................................2420.501010000
..........................................................CAAAGTTAGCATTGGCTCCC...........................................................................2020.501010000
...................................................TCGCCAGCAAAGTTAGCATTGGCTCCC...........................................................................2720.501100000
........................AAATAAAACAATGCTTGTGGTGCCCAC......................................................................................................2720.501010000
.........................AATAAAACAATGCTTGTGGTGCCCA.......................................................................................................2520.501010000
.......................................................CAGCAAAGTTAGCATTGGCTCCCA..........................................................................2420.501010000
.................................................................................ACCGATTTTGCGAGGGCATGGGGACCCG............................................2820.501100000
.......................................................CAGCAAAGTTAGCATTGGCTCC............................................................................2220.501010000
......................AAAAATAAAACAATGCTTGTGGTGC..........................................................................................................2520.501010000
...............................................................................TCACCGATTTTGCGAGGGCATTA...................................................2320.501010000
............................AAAACAATGCTTGTGGTGCCCATTCGCC.................................................................................................2820.501010000
........................AAATAAAACAATGCTTGTGG.............................................................................................................2020.501010000
...............................................................................TCACCGATTTTGCGAGGGCATT....................................................2220.501100000
.........................AATAAAACAATGCTTGTGGTGCCC........................................................................................................2420.501010000
....................................................................................GATTTTGCGAGGGCATGGGGACCT.............................................2420.501100000
.............................AAACAATGCTTGTGGTGCC.........................................................................................................1920.501010000
....................................................................................GATTTTGCGAGGGCATGGGGACC..............................................2320.501010000
....................................................................................GATTTTGCGAGGGCATGGGG.................................................2030.331100000
.................................................................................ACCGATTTTGCGAGGGCATG....................................................2030.331100000
.....................................................................................ATTTTGCGAGGGCATGGG..................................................1830.331100000
.................................AATGCTTGTGGTGCCCATTCGCC.................................................................................................2330.331100000
...................................................................................CGATTTTGCGAGGGCATGGG..................................................2030.331001000
................................................................................CACCGATTTTGCGAGGGCA......................................................1930.331100000
..................................................................................CCGATTTTGCGAGGGCATGG...................................................2030.331100000
...................................................................................CGATTTTGCGAGGGCATGG...................................................1930.331001000
..................................ATGCTTGTGGTGCCCATTCGT..................................................................................................2130.331100000
..................................ATGCTTGTGGTGCCCATTCGCC.................................................................................................2230.331010000
..............................................................................................................TATATTCCCATTGGGGAACAATTGC..................2530.331001000
.................................................................................ACCGATTTTGCGAGGGCATGGGG.................................................2330.331100000
.................................................................................ACCGATTTTGCGAGGGCAT.....................................................1930.331100000
..................................ATGCTTGTGGTGCCCATTCGC..................................................................................................2130.331010000

Generated: 05/15/2015 at 02:47 PM