ID:

dan_1004

 Coordinate:

scaffold_12947:1188856-1189006 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-20.7 -20.7 -20.5 -20.5

Flybase annnotation

CDS [Dana\GF19029-cds]; exon [dana_GLEANR_20650:2]; intron [Dana\GF19029-in]

Repeatable elements

NameClassFamilyStrand
Nobel_I-intLTRPao+
Nobel_LTRLTRPao+
mature
  1. dan_1004  scaffold_12947:1188873-1188893 +
  2. scaffold_13767:1110161-1110181 +
star
  1. scaffold_787:309-332 +
  2. scaffold_1965:224-247 +
  3. scaffold_4239:2327-2350 +
  4. scaffold_4930:1262-1285 +
  5. scaffold_8922:6716-6739 +
  6. scaffold_9034:9688-9711 +
  7. scaffold_9547:18618-18641 -
  8. scaffold_9682:4028-4051 +
  9. scaffold_9787:872-895 +
  10. scaffold_12928:290222-290245 -
  11. dan_1004  scaffold_12947:1188929-1188952 +
  12. scaffold_12962:1543-1566 -
  13. scaffold_13021:187585-187608 -
  14. scaffold_13203:12237-12260 -
  15. scaffold_13250:750513-750536 +
  16. scaffold_13274:109214-109237 +
  17. scaffold_13280:216971-216994 -
  18. scaffold_13333:569058-569081 -
  19. scaffold_13417:6419887-6419910 +
  20. scaffold_13767:1115649-1115672 -
  21. scaffold_13339:3257048-3257071 -

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
AGTGGATCACCGCCAGGGTCGTCGAGACTCACGCCGGCGCGGACGGAAGGGTCAGGGTCGCCGACGTCAGGACTAGTGGAGGAGCAGTATTTAGGAGAGCAGTCCACAAGCTGGCGAGGTTGCCAGTAGTTGAAGCCTAAGGAAGGCCTTCAACGGGGCCGGTGTATAAATATTGTAGATAATTAAGTGGAATTTTATGAAGTCTAGTAGAAGTTAGTTTAGGGCGGAGCGGGAGCGCAAGTAAAGCTCTC
*******************************************************************................((......((((.......((.((..((((((......)))))).)).))..))))......))******************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M044
female body
 V106
head
 V105
male body		 M058
embryo
 V055
head
 V039
embryo
...................................................................CAGGACTAGTGGAGGAGCAGT................................................................................................................................................................... 21 0 2 3.00 6 3 1 2 0 0 0
..............................................................GACGTCAGGACTAGTGGAGGAGC...................................................................................................................................................................... 23 0 2 2.50 5 2 2 0 1 0 0
.....................TCGAGACTCACGCCGGCGCGGA................................................................................................................................................................................................................ 22 0 20 1.70 34 34 0 0 0 0 0
..................................................................TCAGGACTAGTGGAGGAGC...................................................................................................................................................................... 19 0 2 1.50 3 0 3 0 0 0 0
..........................................................CGCCGACGTCAGGACTAGTGGAGGAGC...................................................................................................................................................................... 27 0 2 1.00 2 0 2 0 0 0 0
...........................................................GCCGACGTCAGGACTAGTGGAGGAGC...................................................................................................................................................................... 26 0 2 1.00 2 0 1 0 0 1 0
................................................................CGTCAGGACTAGTGGAGGAGC...................................................................................................................................................................... 21 0 2 1.00 2 1 0 1 0 0 0
...............................................................ACGTCAGGACTAGTGGAGG......................................................................................................................................................................... 19 0 2 1.00 2 2 0 0 0 0 0
......................CGAGACTCACGCCGGCGCGGA................................................................................................................................................................................................................ 21 0 20 0.80 16 16 0 0 0 0 0
......................CGAGACTCACGCCGGCGCGGACG.............................................................................................................................................................................................................. 23 0 20 0.60 12 12 0 0 0 0 0
.................GTCGTCGAGACTCACGCCGGCGCGGAC............................................................................................................................................................................................................... 27 0 20 0.55 11 11 0 0 0 0 0
....................................................................AGGACTAGTGGAGGAGCAG.................................................................................................................................................................... 19 0 2 0.50 1 1 0 0 0 0 0
.........................................................TCGCCGACGTCAGGACTAGTGG............................................................................................................................................................................ 22 0 2 0.50 1 0 1 0 0 0 0
...................................................................CAGGACTAGTGGAGGAGCAG.................................................................................................................................................................... 20 0 2 0.50 1 1 0 0 0 0 0
..................................................................TCAGGACTAGTGGAGGAGCAG.................................................................................................................................................................... 21 0 2 0.50 1 1 0 0 0 0 0
.............................................................CGACGTCAGGACTAGTGGAGGAGC...................................................................................................................................................................... 24 0 2 0.50 1 0 1 0 0 0 0
................................................................CGTCAGGACTAGTGGAGG......................................................................................................................................................................... 18 0 2 0.50 1 1 0 0 0 0 0
...........................................................GCCGACGTCGGGACTAGTGGAGGAGG...................................................................................................................................................................... 26 2 3 0.33 1 0 1 0 0 0 0
..........................................................CGCCGACGTCGGGACTAGTGGAGGAGC...................................................................................................................................................................... 27 1 3 0.33 1 0 1 0 0 0 0
...........................................................................................................................CAGTAGTTGAAGCCTAAGGAAGGC........................................................................................................ 24 0 20 0.20 4 0 0 1 3 0 0
...........................................................................................................................CAGTAGTTGAAGCCTAAGGAAGG......................................................................................................... 23 0 20 0.20 4 4 0 0 0 0 0
.........................................................TCGCCGACGTCGGGACTAGTTG............................................................................................................................................................................ 22 2 5 0.20 1 0 0 1 0 0 0
..................................................................................................................................................................................................TTATGAAGTCTAGTCGAAAT..................................... 20 2 5 0.20 1 0 0 0 0 1 0
..........................................................CGCCGACGTCGGGACTAGTGGT........................................................................................................................................................................... 22 2 5 0.20 1 0 1 0 0 0 0
..............................................................................................GAGAGCAGTCCACAAGCTGGC........................................................................................................................................ 21 0 20 0.20 4 0 4 0 0 0 0
................................................................CGTGAGGACTAGTGGAGC......................................................................................................................................................................... 18 2 6 0.17 1 0 0 1 0 0 0
.......................GAGACTCACGCCGGCGCGGAC............................................................................................................................................................................................................... 21 0 20 0.15 3 3 0 0 0 0 0
......................................GCGGACGGAAGGGTCAGG................................................................................................................................................................................................... 18 0 20 0.15 3 3 0 0 0 0 0
.....................................................AGGGTCGCCGACGTCAGGACT................................................................................................................................................................................. 21 0 20 0.10 2 0 2 0 0 0 0
.......................................................................................................CCACAAGCTGGCGAGGTTGCC............................................................................................................................... 21 0 20 0.10 2 2 0 0 0 0 0
....................GTCGAGACTCACGCCGGCGCGGACGG............................................................................................................................................................................................................. 26 0 20 0.10 2 2 0 0 0 0 0
...GGATCACCGCCAGGGTCGTCG................................................................................................................................................................................................................................... 21 0 20 0.10 2 2 0 0 0 0 0
...............................................................................................AGAGCAGTCCACAAGCTGGC........................................................................................................................................ 20 0 20 0.10 2 0 2 0 0 0 0
.GTGGATCACCGCCAGGGTCGT..................................................................................................................................................................................................................................... 21 0 20 0.10 2 2 0 0 0 0 0
............................................GGAAGGGTCAGGGTCGCCGACGTCA...................................................................................................................................................................................... 25 0 20 0.10 2 2 0 0 0 0 0
......................................GCGGACGGAAGGGTCAGGGTCGCCG............................................................................................................................................................................................ 25 0 20 0.10 2 2 0 0 0 0 0
............................................................................................AGGAGAGCAGTCCACAAGCTGGC........................................................................................................................................ 23 0 20 0.10 2 0 2 0 0 0 0
.................GTCGTCGACACTCACGCCGGCGCGG................................................................................................................................................................................................................. 25 1 20 0.10 2 2 0 0 0 0 0
.....................TCGAGACTCACGCCGGCGC................................................................................................................................................................................................................... 19 0 20 0.10 2 2 0 0 0 0 0
...........................................................................................TAGGAGAGCAGTCCACAAGCTGG......................................................................................................................................... 23 0 20 0.10 2 2 0 0 0 0 0
...............................................................................................................................................................................................................GAGAAGTTAGTTGAGGGC.......................... 18 2 11 0.09 1 0 0 1 0 0 0
...............................................................................................................................................................................................................TAGAAGTTAGTTAGGGGAGG........................ 20 3 13 0.08 1 0 0 0 0 1 0
..............................................................ATCGTGAGGACTAGTGGAG.......................................................................................................................................................................... 19 3 19 0.05 1 0 0 1 0 0 0
....................................................................................CAGTATTTAGGAGAGCAGTCCAC................................................................................................................................................ 23 0 19 0.05 1 1 0 0 0 0 0
.................................................GGTCAGGGTCGCCGACGTCAGGACTA................................................................................................................................................................................ 26 0 20 0.05 1 1 0 0 0 0 0
..............AGGGTCGTCGAGACTCACGCCGGCGCG.................................................................................................................................................................................................................. 27 0 20 0.05 1 0 1 0 0 0 0
.......CACCGCCAGGGTCGTCGAGACC.............................................................................................................................................................................................................................. 22 1 20 0.05 1 0 0 0 0 0 1
...................................................TCAGGGTCGCCGACGTCAGGACTAGT.............................................................................................................................................................................. 26 0 20 0.05 1 0 0 0 1 0 0
.................GTCGTCGAGACTCACGCCGGCGC................................................................................................................................................................................................................... 23 0 20 0.05 1 0 0 0 1 0 0
............................................................................................................................AGTAGTTGAAGCCTAAGGAAGG......................................................................................................... 22 0 20 0.05 1 1 0 0 0 0 0
...........................................................................................................................CAGTAGTTCAAGCCTAAGGAAGG......................................................................................................... 23 1 20 0.05 1 1 0 0 0 0 0
...................................................................................................................................GAAGCCTAAGGAAGGCCTTCAACGGGGC............................................................................................ 28 0 20 0.05 1 0 0 0 1 0 0
....................GTCGAGACTCACGCCGGCGCGGACGGA............................................................................................................................................................................................................ 27 0 20 0.05 1 1 0 0 0 0 0
..............................................AAGGGTCAGGGTCGCCGACGT........................................................................................................................................................................................ 21 0 20 0.05 1 1 0 0 0 0 0
...........................................................................................................................................................................................TGGAATTTTATGAAGTCTAGT........................................... 21 0 20 0.05 1 0 0 0 1 0 0
...........................................................................................AAGGAGAGCAGTCCACAAGCTG.......................................................................................................................................... 22 1 20 0.05 1 1 0 0 0 0 0
........................AGACTCACGCCGGCGCGGA................................................................................................................................................................................................................ 19 0 20 0.05 1 0 0 0 1 0 0
........ACCGCCAGGGTCGTCGAGACTCA............................................................................................................................................................................................................................ 23 0 20 0.05 1 1 0 0 0 0 0
....................................................................................................................................................................................................................................GCGGGAGCGCAAGTAAAGCT... 20 0 20 0.05 1 1 0 0 0 0 0
...............GGGTCGTCGAGACTCACGCCGGCGC................................................................................................................................................................................................................... 25 0 20 0.05 1 1 0 0 0 0 0
...........................CTCACGCCGGCGCGGACGGAAGG......................................................................................................................................................................................................... 23 0 20 0.05 1 1 0 0 0 0 0
...........................CTCACGCCGGCGCGGACGGAAGGG........................................................................................................................................................................................................ 24 0 20 0.05 1 1 0 0 0 0 0
...........................................................................................................................CAGTAGTTGAAGCCTAAGGAAG.......................................................................................................... 22 0 20 0.05 1 1 0 0 0 0 0
.....................TCGAGACTCACGCCGGCGCGG................................................................................................................................................................................................................. 21 0 20 0.05 1 0 0 0 1 0 0
.................................................................................................................GCGAGGCTGCCAGTAGTTGAAGCC.................................................................................................................. 24 1 20 0.05 1 0 0 1 0 0 0
............................................................................................AGGAGAGCAGTCCACAAGCTG.......................................................................................................................................... 21 0 20 0.05 1 0 0 1 0 0 0
.......CACCGCCAGGGTCGTCGAGACTCACG.......................................................................................................................................................................................................................... 26 0 20 0.05 1 1 0 0 0 0 0
...........................................................................................................................CAGTAGTTGAAGCCTAAGGAAGGCC....................................................................................................... 25 0 20 0.05 1 0 0 0 1 0 0
...................................................TCAGGGTCGCCGACGTCAGG.................................................................................................................................................................................... 20 0 20 0.05 1 0 1 0 0 0 0
............................TCACGCCGGCGCGGACGGAAGG......................................................................................................................................................................................................... 22 0 20 0.05 1 1 0 0 0 0 0
.........................................................................................................................GCCAGTAGTTGCAGCCTAAGG............................................................................................................. 21 1 20 0.05 1 0 0 0 0 0 1
..................................CGGCGCGGACGGAAGGGTCAG.................................................................................................................................................................................................... 21 0 20 0.05 1 0 0 0 1 0 0
.............................................................................................................................GGAGTTGAAGCCTAAGGAAGGCCT...................................................................................................... 24 1 20 0.05 1 0 0 0 1 0 0
......................................................................................................TCCACAAGCTGGCGAGGTTGC................................................................................................................................ 21 0 20 0.05 1 0 0 0 1 0 0
..................TCGTCGAGGCTCACGCCGGCGCGG................................................................................................................................................................................................................. 24 1 20 0.05 1 1 0 0 0 0 0
................................................................................................................GGCGAGGTTGCCAGTAGTTGA...................................................................................................................... 21 0 20 0.05 1 0 0 0 0 1 0
...........................................................................................TAGGAGAGCAGTCCACAAGCTGGCGAG..................................................................................................................................... 27 0 20 0.05 1 1 0 0 0 0 0
.............................................GAAGGGTCAGGGTCGCCGACGTCAG..................................................................................................................................................................................... 25 0 20 0.05 1 1 0 0 0 0 0
.........................GACTCACGCCGGCGCGGACG.............................................................................................................................................................................................................. 20 0 20 0.05 1 0 0 1 0 0 0
......................................................................................................................................GCCTAAGGAAGGCCTTCAACGGGGCCGG......................................................................................... 28 0 20 0.05 1 1 0 0 0 0 0
....................................................CAGGGTCGCCGACGTCAGGACTAGT.............................................................................................................................................................................. 25 0 20 0.05 1 0 1 0 0 0 0
......................CGAGACTCACGCCGGCGC................................................................................................................................................................................................................... 18 0 20 0.05 1 1 0 0 0 0 0
.....................................CGCGGACGGAAGGGTCAGGGTCG............................................................................................................................................................................................... 23 0 20 0.05 1 1 0 0 0 0 0
.................................................GGTCAGGGTCGCCGACGTCAG..................................................................................................................................................................................... 21 0 20 0.05 1 1 0 0 0 0 0
.............................CACGCCGGCGCGGACGGAAGGGTCAGG................................................................................................................................................................................................... 27 0 20 0.05 1 1 0 0 0 0 0
......TCACCGCCAGGGTCGTCGAGACT.............................................................................................................................................................................................................................. 23 0 20 0.05 1 1 0 0 0 0 0
...............................................AGGGTCAGGGTCGCCGACGTCAGGA................................................................................................................................................................................... 25 0 20 0.05 1 1 0 0 0 0 0
..............................................................................................GAGAGCAGTCCACAAGCTGGCGA...................................................................................................................................... 23 0 20 0.05 1 0 0 0 1 0 0
......................................................................................................................................................................................................................TAGTTTAGGGCGGAGCGGGA................. 20 0 20 0.05 1 1 0 0 0 0 0
.....................TCGAGACTAACGCCGGCGCGGACGGA............................................................................................................................................................................................................ 26 1 20 0.05 1 1 0 0 0 0 0
.................GTCGTCGAGACTCACGCCGGCGCGGACT.............................................................................................................................................................................................................. 28 1 20 0.05 1 1 0 0 0 0 0
...........................................................................................TAGGAGAGCAGTCCACAAGCTGGC........................................................................................................................................ 24 0 20 0.05 1 0 0 0 1 0 0
....................................................CAGGGTCGCCGACGTCAGGAC.................................................................................................................................................................................. 21 0 20 0.05 1 0 1 0 0 0 0
...................................................................................................CAGTCCACAAGCTGGCGAGGTT.................................................................................................................................. 22 0 20 0.05 1 1 0 0 0 0 0
..................................................GTCGGGGTCGCCGACGTCAGG.................................................................................................................................................................................... 21 1 20 0.05 1 0 1 0 0 0 0

Anti-sense strand reads

TCACCTAGTGGCGGTCCCAGCAGCTCTGAGTGCGGCCGCGCCTGCCTTCCCAGTCCCAGCGGCTGCAGTCCTGATCACCTCCTCGTCATAAATCCTCTCGTCAGGTGTTCGACCGCTCCAACGGTCATCAACTTCGGATTCCTTCCGGAAGTTGCCCCGGCCACATATTTATAACATCTATTAATTCACCTTAAAATACTTCAGATCATCTTCAATCAAATCCCGCCTCGCCCTCGCGTTCATTTCGAGAG
********************************************************************************************************................((......((((.......((.((..((((((......)))))).)).))..))))......))******************************************************************* 		Read size # Mismatch Hit Count Total Norm Total M058
embryo
 M044
female body
 V039
embryo
 V106
head
................................................CCCAGTCCCAGCGGCTGCAGTCCTGAT................................................................................................................................................................................ 27 0 20 2.40 48 48 0 0 0
...........................GAGTGCGGCCGCGCCTGCCTTCCCAGT..................................................................................................................................................................................................... 27 0 20 2.20 44 0 44 0 0
......................................................CCCAGCGGCTGCAGTCCTGAT................................................................................................................................................................................ 21 0 20 1.35 27 27 0 0 0
...................................................AGTCCCAGCGGCTGCAGTCCTGAT................................................................................................................................................................................ 24 0 20 1.10 22 7 15 0 0
.....................................................................................................................................................................................TAATTAACCTTAAAATACTTCAGATCATC......................................... 29 1 3 1.00 3 3 0 0 0
................................................................GCAGTCCTGATCACCTCCTCGTCATAAAT.............................................................................................................................................................. 29 0 1 1.00 1 0 1 0 0
...........................................................................CACCTCCTCCTCATAAAT.............................................................................................................................................................. 18 1 1 1.00 1 1 0 0 0
.......................................................CCAGCGGCTGCAGTCCTGATCACCT........................................................................................................................................................................... 25 0 2 1.00 2 2 0 0 0
.....TAGTGGCGGTCCCAGCAGCTCT................................................................................................................................................................................................................................ 22 0 20 0.75 15 15 0 0 0
.........................................................AGCGGCTGCAGTCCTGATCACCTCCT........................................................................................................................................................................ 26 0 2 0.50 1 0 1 0 0
............................................................GGCTGCAGTCCTGATCACCTCCTCGT..................................................................................................................................................................... 26 0 2 0.50 1 0 1 0 0
............................................................GGCTGCAGTCCTGATCACCTCCT........................................................................................................................................................................ 23 0 2 0.50 1 0 1 0 0
......................................................CCCAGCGGCTGCAGTCCTGATCACCT........................................................................................................................................................................... 26 0 2 0.50 1 1 0 0 0
........................................................CAGCGGCTGCAGTCCTGATCACCTCCT........................................................................................................................................................................ 27 0 2 0.50 1 0 1 0 0
...........................................................CGGCTGCAGTCCTGATCACCTCCT........................................................................................................................................................................ 24 0 2 0.50 1 0 1 0 0
.........................................................AGCGGCTGCAGTCCTGATCACCTC.......................................................................................................................................................................... 24 0 2 0.50 1 0 1 0 0
.....................................................TCCCAGCGGCTGCAGTCCTGATCACCT........................................................................................................................................................................... 27 0 2 0.50 1 0 1 0 0
.......................CTCTGAGTGCGGCCGCGCCTGCCTT........................................................................................................................................................................................................... 25 0 20 0.40 8 0 8 0 0
............................................................................................................TCGACCGCTCCAACGGTCATCAACT...................................................................................................................... 25 0 20 0.35 7 7 0 0 0
.....................................................................................................................................................................................TAATTAACCTTAAAATACTTCAGATCAGC......................................... 29 2 3 0.33 1 1 0 0 0
................................................................................CCTCGTCATAAATCCTCTCGTCAGGT................................................................................................................................................. 26 0 18 0.28 5 1 4 0 0
........................................................................................................................................................................................TTAACCTTAAAATACTTCAGATCATC......................................... 26 1 4 0.25 1 0 1 0 0
......................................................CCCAGCGGCTGCAGTCCTGATCACCAC.......................................................................................................................................................................... 27 1 4 0.25 1 1 0 0 0
...........................................................................CACCTCCTCCTCATAAAAC............................................................................................................................................................. 19 2 4 0.25 1 1 0 0 0
.......................................................................................................................................................................................ATTAACCTTAAAATACTTCAGATCATC......................................... 27 1 4 0.25 1 0 1 0 0
......................................................CCCAGCGGCTGCAGTCCTGATCAC............................................................................................................................................................................. 24 0 20 0.25 5 0 5 0 0
...CCTAGTGGCGGTCCCAGCAGCTGT................................................................................................................................................................................................................................ 24 1 20 0.25 5 5 0 0 0
.................................................CCAGTCCCAGCGGCTGCAGTCCTGAT................................................................................................................................................................................ 26 0 20 0.20 4 0 4 0 0
....................................................................................................TCAGGTGTTCGACCGCTCCAACGGT.............................................................................................................................. 25 0 20 0.20 4 4 0 0 0
...................................................AGTCCCAGCGGCTGCAGTCCTGATCA.............................................................................................................................................................................. 26 0 20 0.20 4 0 4 0 0
...............................................................................TCCTCGTCATAAATCCTCTCGTCAG................................................................................................................................................... 25 0 18 0.17 3 2 1 0 0
..............................................................................CTCCTCGTCATAAATCCTCTCGTCAG................................................................................................................................................... 26 0 18 0.17 3 0 3 0 0
.............................................................................................................................................................................................................................CCCGCCTCGCCCTCGCGTTCAT........ 22 0 20 0.15 3 0 3 0 0
.......................................................CCAGCGGCTGCAGTCATGATCACCTC.......................................................................................................................................................................... 26 1 7 0.14 1 1 0 0 0
.........................................................................................................................................................................................TAACCTTAAAATACTTCAGATCATCGA....................................... 27 3 8 0.13 1 1 0 0 0
.....................................................................................................................CCAACGGTCATCAACTTCGGATTCCTT........................................................................................................... 27 0 20 0.10 2 2 0 0 0
....................................................GTCCCAGCGGCTGCAGTCCTGAT................................................................................................................................................................................ 23 0 20 0.10 2 1 0 1 0
................................................................................................................CCGCTCCAACGGTCATCAACTTCGGAT................................................................................................................ 27 0 20 0.10 2 2 0 0 0
...................................................AGTCCCAGCGGCTGCAGTCCTGA................................................................................................................................................................................. 23 0 20 0.10 2 0 2 0 0
................................................CCCAGTCCCAGCGGCTGCAGTCCTGATCA.............................................................................................................................................................................. 29 0 20 0.10 2 2 0 0 0
..................................................CAGTCCCAGCGGCTGCAGTCCTGATCAC............................................................................................................................................................................. 28 0 20 0.10 2 0 2 0 0
.....................................................CCCCAGCGGCTGCAGTCCTGATCAC............................................................................................................................................................................. 25 1 20 0.10 2 2 0 0 0
......................................................................................................................................CGGATTCCTTCCGGAAGTTGCCCC............................................................................................. 24 0 20 0.10 2 0 2 0 0
...................................................AGTCCCAGCGGCTGCAGTCCTGATCAC............................................................................................................................................................................. 27 0 20 0.10 2 2 0 0 0
..........................................................................CCACGTCCTCCTCATAAATC............................................................................................................................................................. 20 3 14 0.07 1 1 0 0 0
...................................................................................CGTCATAAATCCTCTCGTCAGGTGTT.............................................................................................................................................. 26 0 17 0.06 1 0 1 0 0
...................................................................................CGTCATAAATCCTCTCGTCAG................................................................................................................................................... 21 0 18 0.06 1 1 0 0 0
................................................................................CCTCGTCATAAATCCTCTCGTCAG................................................................................................................................................... 24 0 18 0.06 1 0 1 0 0
................................................................................CCTCGTCATAAATCCTCTCGTCAGG.................................................................................................................................................. 25 0 18 0.06 1 0 1 0 0
....................................................................................GTCATAAATCCTCTCGTCAGGTGTT.............................................................................................................................................. 25 0 18 0.06 1 0 1 0 0
...................................................................................CATCATAAATCCTCTCGTCAGG.................................................................................................................................................. 22 1 18 0.06 1 0 1 0 0
..............................................................................CTCCTCGTCATAAATCCTCTCGTCAGGT................................................................................................................................................. 28 0 18 0.06 1 0 1 0 0
.................................................................................CTCGTCATAAATCCTGTCGTCAGG.................................................................................................................................................. 24 1 19 0.05 1 0 1 0 0
................................................................................CCTCGTCATAAATCCTCTCGTTAGC.................................................................................................................................................. 25 2 19 0.05 1 1 0 0 0
................................................................................CCTCGTCATAAATCCTCTCGTCTG................................................................................................................................................... 24 1 19 0.05 1 1 0 0 0
....................CAGCTCTGAGTGCGGCCGGGCCTGCCT............................................................................................................................................................................................................ 27 1 20 0.05 1 0 1 0 0
.........................................................................................................TGTTCGACCGCTCCAACGGTCAACAAGT...................................................................................................................... 28 2 20 0.05 1 1 0 0 0
..........................TGAGTGCGGCCGCGCCTGCCTTCCCAG...................................................................................................................................................................................................... 27 0 20 0.05 1 0 1 0 0
..................................................................................................................GCTCCAACGGTCATCAACTTCGGAT................................................................................................................ 25 0 20 0.05 1 0 1 0 0
........................TCTGAGTGCGGCCGCGCCTGCCTT........................................................................................................................................................................................................... 24 0 20 0.05 1 0 1 0 0
..........................................................................................................................GGTCATCAACTTCGGATTCCT............................................................................................................ 21 0 20 0.05 1 0 1 0 0
................................................................................................................................................CCGGAAGTTGCCCCGGCCACATATT.................................................................................. 25 0 20 0.05 1 1 0 0 0
............................................................................................TCCTCTCGTCAGGTGTTCGACCG........................................................................................................................................ 23 0 20 0.05 1 0 0 0 1
..............................................................................................................................................................................................................................CCGCCTCGCCCTCGCGTTCATC....... 22 1 20 0.05 1 1 0 0 0
................................................................................................................CCGCTCCAGCGGTCATCAACTTCGGAT................................................................................................................ 27 1 20 0.05 1 1 0 0 0
.................................................................................................................CGCTCCAACGGTCATCAACTTCGGATTC.............................................................................................................. 28 0 20 0.05 1 0 1 0 0
..................................................CAGTCCCAGCGGCTGCAGTCCAGAT................................................................................................................................................................................ 25 1 20 0.05 1 1 0 0 0
............................................................................................................................................CCTTCCGGAAGTTGCCCCGGCCACATA.................................................................................... 27 0 20 0.05 1 0 1 0 0
.................................................................................................................................................................................................................................CCTCGCCCTCGCGTTCATTTCGAGT. 25 1 20 0.05 1 0 1 0 0
............................................................................................................TCGACCGCTCCAACGGTCATCAAC....................................................................................................................... 24 0 20 0.05 1 0 1 0 0
................................................CCCAGTCTCAGCGGCTGCAGTCCTGAT................................................................................................................................................................................ 27 1 20 0.05 1 1 0 0 0
..................................................................................................................GCTCCAACGGTCATCAACTTCGGATTC.............................................................................................................. 27 0 20 0.05 1 0 1 0 0
.......................................................................................................................................................................................................................TCAAATCCCGCCTCGCCCTCGCGGTCAT........ 28 1 20 0.05 1 1 0 0 0
.......................................................................................................................................................................................ATTCACCTTAAAATACTTCAGATC............................................ 24 0 20 0.05 1 1 0 0 0
..........................................................................................................................................TTCCTTCCGGAAGTTGCCCGGGCCACAT..................................................................................... 28 1 20 0.05 1 0 1 0 0
..............................................................................................CTCTCGTCAGGTGTTCGACCGCT...................................................................................................................................... 23 0 20 0.05 1 1 0 0 0
....................................................................................................................TCCGACGGTCATCAACTTCGG.................................................................................................................. 21 1 20 0.05 1 0 1 0 0
..................................................CAGTCCCAGCGGCTGCGGTCCTGAT................................................................................................................................................................................ 25 1 20 0.05 1 0 1 0 0
.....TAGTGGCGGTCCCAGCAGCT.................................................................................................................................................................................................................................. 20 0 20 0.05 1 0 1 0 0
..................................................CAGTCCCAGCGGCTGCAGTCCTGAGC............................................................................................................................................................................... 26 1 20 0.05 1 1 0 0 0
.................................................................................................................................................................................CTATTAATTCACCTTAAAATACTTCAG............................................... 27 0 20 0.05 1 1 0 0 0
.....................................................................................................CAGGTGTTCGACCGCTCCAACGGTCAT........................................................................................................................... 27 0 20 0.05 1 0 1 0 0
................................................................................................................................................................................................................................GCCACGCCCTCGCGTTGATTTCGAG.. 25 2 20 0.05 1 0 1 0 0
...................................................................................................................CTCCAACGGTCATCAACTTCGGATTC.............................................................................................................. 26 0 20 0.05 1 0 1 0 0
.................................................CCAGTCCCAGCGGCTGCAGTCCCGAT................................................................................................................................................................................ 26 1 20 0.05 1 1 0 0 0
...............................................TCCCAGTCCCAGCGGCCGCAGTCCT................................................................................................................................................................................... 25 1 20 0.05 1 0 1 0 0
...................................................................................................................CTCCAACGGTCATCAACTTCGGATTCCT............................................................................................................ 28 0 20 0.05 1 0 1 0 0
........................................................................................................................................................................................TTGACCTTAAAATACTTCAGATCAT.......................................... 25 1 20 0.05 1 1 0 0 0
................................................................................................CTCGTCAGGTGTTCGACCGCTCCAA.................................................................................................................................. 25 0 20 0.05 1 1 0 0 0
.........................................................................................................................................................................................................................AAATCCCGCCTCGCCCTCGCGTTCAT........ 26 0 20 0.05 1 0 1 0 0
................................................................................................................CCGCTCCAACGGTCATCAACTTCGG.................................................................................................................. 25 0 20 0.05 1 0 1 0 0
.....................................................................................................................CCAACGGTCATCAACTTAGGATTCCT............................................................................................................ 26 1 20 0.05 1 0 1 0 0
.........................................................................................................................................................................................CAACCTTAAAATACTTCAGATCATCTA....................................... 27 3 20 0.05 1 1 0 0 0
...CCCAGTGGCGGTCCCAGCAGCTCT................................................................................................................................................................................................................................ 24 1 20 0.05 1 1 0 0 0
......................................................................................................................................................................................................................................CCCTCGCGTTCATTTCGAGA. 20 0 20 0.05 1 1 0 0 0
............................................................................................................TCGACCGCTCCAACGGTCATCAACTTCG................................................................................................................... 28 0 20 0.05 1 0 1 0 0
..................................................................................................CGTCAGGTGTTCGACCGCTCCAAC................................................................................................................................. 24 0 20 0.05 1 1 0 0 0
......................................CGCCTGCCTTCCCAGTCCCAGCGGCTGCA........................................................................................................................................................................................ 29 0 20 0.05 1 0 1 0 0
.........GGCGGTCCCAGCAGATCTGAGTG........................................................................................................................................................................................................................... 23 1 20 0.05 1 0 1 0 0
..........................................................................................................GTTCGACCGCTCCAACGGGCATCAACT...................................................................................................................... 27 1 20 0.05 1 0 1 0 0
.....................................................................................................................CCAACGGTCATCAACTTCGGATTCC............................................................................................................. 25 0 20 0.05 1 0 1 0 0
.........................................................................................................................AGGTCATCAACTTCGGATTCCTT........................................................................................................... 23 1 20 0.05 1 0 1 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droAna3 scaffold_12947:1188806-1189056 + dan_1004 AG-----TGGATCACCGCCAGGGTCGTCGAGAC-TCACGCCGGCGCGGACGGAAGGGTCAGGGTCGCCGACGTCAGGACTAGTGGAGGAGCAGTATTTAGGAGAGCAGTCCACAAGCTGGCGAGGTTGCCAGTA------------------------GTT-GAAGCCTAAGGAAGGCCTTCAACGGGGCCGGTGT--A----------TAAATAT-TGT---------------------A-----GATAAT------TA--------------------------------AG-TGG----------------------AA-------TTTTATGAAG-------TCT--AGTAGAAGTTAG-TTTAGGGCGGA-GCGGGAGCGCAAGTAAAGCT--CTC
droBip1 scf7180000395937:2512-2768 + AG-----TGGCTCACGGGACGAGAAGGAGCAAC-ACACGCCGGCGCGGACGGAAGGGTCAGGGTCGCCGTCGTCCGAACTAGCTCTGGAGCGGAATATAGGAGAGCGGTCCACAAGCTGGCGCGGCTGCCAGTT-----------------------AGTT-GAAGCCTGATGGAGGCCTTCAACGGGGCCGGTGT--A----------AATTGATTTAC---A-----TTT--------------A----T-T-----AAAGTCGAAAAATTT---------GAATT---------ATAGTTATAGCTGAATTGTTTTTGTTAGTTGTTAGTCT------------------------GTTAA-TTT--------------------------ACT--CTT
droKik1 scf7180000302339:7935-8171 + AG-----TGGCTCCTGGGAAGGATCGTCGCGAC-GCACGCAGGAGAGGACGGCATGGTCAGGGTCGTCGACCTTAGGAGAAGCGATGGAGCAGTGTTCCGGAGGGCCATCCACAAGCTGGCGCCGCTGCCAGTG-----------------------TCTT-GAAGCCG--TGCAGGCGTTCAACGGGGCCGGTGT--T----------GTCTTAATTGA---G-----ACT------------------------------------AAATT------------------------TG-------------------TA----------T--TTTGTAG-------AAG--AGTGTA----------AGGGCGAAGGCGGGAGCACAAT-AAAGCT--CTC
droFic1 scf7180000453257:28972-29229 - AA-----TGGTTGATCGGGAGGATCGTGGCAAC-CCACGCAGGAGAGGACGGTATTGTCAGGATCGTCGAATTGAGGACCAGTGAAGGAGGAATTTATAAGCGGGCCATCCACAAATTGGCGCCGCTTCCAATC-----------------------GGTT-GAAGCCG--GATGGGCCTTCAACGGGGCCGGTGT--T----------GGCTGAAGCCAG-TT--T---T----------T---TTGATTTT------TG-------AAATT------------------------TA-------------------AA----------G--TTTGAAG-------TCT--AGTATAAGTTAG-TTTAGGGCGAAGGCGGGAGCGCAAT-AAAGCT--TTC
droEle1 scf7180000487317:16085-16334 + AG-----TGGCTCCTGGGTCGAATCGTCGGGAC-TCACGCAGGGAAGGATGACATGGTCAGGGTCGTCGACG------------GTGGAGGAGTTTTTTGGCGGGCCATCCACAAGCTGGCGCCGCTACCAGT-------------------------------GGCCT--TTCAGGCCTTTAACGGGGCCGGTGT--T----------GGCTCATTTCA---G-----TTT--------------T----T-TATTGAA-----------TT------------------------GACGTACCA-----ATTGTTGAAGCT-------A--TTTGAAG-------TTT--ACTGTAAGTTAG-CTTAAAGCTAAGGCGGGAGCACAAT-AAAGCT--CTC
droRho1 scf7180000770596:4868-5123 + AA-----TGGCTCCTCGGCAGAATAGTCACCAG-GCACGCAGGGGAGGACGGCATGGTCAGGGTCGTCGACGTGCGGACTAGTGGAGGAGGCCTTTTCCGGCGGGCCATTCACAAGTTGGCGCCACTTCCAGTA-----------------------TGTT-GAAGCCC--GATGGGTGTTCAACGGGGCCGGTGT--T----------CGCTCAAATTTG-AA-----TGT--------------T----T-A-ATGA----------AAT-----------------------------------------TGTTAAA----------A--CTTGAAG-------TTT--AGTGTAAGTTAG-TTTAGGGCGAAGGCGGGAGCACAAT-AAAGTT--CTA
droBia1 scf7180000298837:195-393 - G----------------------TGAACGGCAC-GCCCGCAGGGGAGGACGGCATGTTCAGGGTCGAGGACGTTAGGACAAGCGGAGGA---GTTTTTCGGCTTGCCCTCCATACATTGACGCCGCTTCTTATA-----------------------TGTT-GAAGCCT----GAACCTTTCAACGGGGCCGCTGT--T----------GGTTAAAGCCATA----------------------------------------------AAATT------------------------A---------------------------------------------------------------AAA-TTTGGGACGAAAGTAGGTACGCAAT-AAAGTA--CTC
droTak1 scf7180000410961:2734-2977 + AA-----TGGCTCCTGGGGAGAATCATCGCCAG-GCACGCAGGGGAGGACGGCATGGTCAGGGTCGTCGACGTTAGGACGGGCGCAGGAGGCGTTTTTCGGCGAGCCATCCATAAATTGGCGCCGCTTCCCATT-----------------------TGTT-GAAGCCT----GAAGCGTTCAACGGGGCCGGTGT--T----------GCGAGATTTGA---A-----TTT--------------G----T-A-----------------CT------------------------TG-------------------AA----------G--TTTGAAG-------TTT--AGTGTAAGTTAG-TTTAGGACGAAGGCGGGTGCACAAT-AAAGGT--CTC
droEug1 scf7180000409057:17236-17505 - GG-----TGGCTTACAGGCCGCGTGGTGGCAAC-AACAGTCGGTGAGGACGGAAGAGTGCGTGTGGCGGAGGTACGGACGTCAG---GAGGCGTCATCAAGCGCGCCATCCACAAGCTGGCATTGCTGCCAGTAAGCAACGCT---CCTAACGAGGAGGTT-AAAGCGC--CGGAGGCCTTCAACGGGGCCGGAATGTT----------GGAGCAGTAGAT--T--AA----------------GTT----T-TATTGTT-----------AGTTT---------------------CA-------------------AG----------G--ATAGATG-------AAA--AGAAAGAATTAA-TTGAATACGCAGCCGAAATGTAAAC-AAA--------
dm3 chr2L:22350696-22350941 + AG-----TGGCTGCTGGGAATAGTCATCGCGAC-GCACGCACGTGACTACGGCATGGTTC-------TGACCCTAAAAGGAGCGACGGAGCAGTGTTTC-GTGAGCGATTCACAAGCTGGTGCCGCTGTCAGTT-----------------------TGTT-GAAGCCG--TTGAGGCCATCAACGGGCCAGGTTG--AGGTTGAGGTTGGCTGAAGTTGT--------------------AGTGAT----T-TATTGGT-----------TTT---------GTATGAAGT---------------------ACACAAC----------A--TTTTTAG-------TCT--AGTGTAAGTTAG-TTTAAGGCGAA--------------------------
droSim2 node_882:45-208 - AG-----TGGCTCCTGGGAAGGATCGTCGCGAC-GCACGCAGGAGAGGACGGCAAGGTCAGGGTCGTCGACCTTAGGAGGAGTGATGGAGCCATCTTCCGGAGGGCGATCCACAAGCTGGCGCCGCTGCCGATT-----------------------TGTT-GAAGCCG--TGGAGGCGTTCAACGGGGCCGGTGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droSec2 scaffold_147:16723-16886 - AATGAGATGGCCTTTGGCGAGAGTCATGCAGTT-GATTCCTGGCAGAGACGGCGTCGCTCGAGTTGCAGAATTGAGGACCGCGTCTGGAGTAA---TAAGGCGGGCAGTGAACAAGCTGTGTCTGCTTCCCCTTGAGGACTC---------------TGTT-GGA---A--GCCAAGCTTCCAACGGGG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droYak3 v2_chrUn_1899:28080-28326 + AG-----TGGCTCCTGGGAAGGATCGTCGCGAC-GCACGCAGGAGAGGACGGCATGGTCAGGGTCGTCTACCTTAGGAGGAGTGATGGAGCCATCTTCCGGGGGGCGATCCACAAGCTGGCGCCGCTGCCGATT-----------------------TGTT-GAAGCCG--TGGAGGCGTTCAACAAGGCCGGTGT--T----------GGCGGAACTCATA-------TTG------T--C-----GG-----------------------T------------------------CA-------------------TT----------GTTTATT--A-------TTT--ATTGTTGGCATG-TTTAGGGCGAAGGCGGGAGCATAAT-AAAGTT--CTC
droEre2 scaffold_4929:22601029-22601303 + AG-----TGGCTGCTGGGAAAATTCGTCGCGAC-GCACGCAGGGGAGGACGGCA---------TCGTCGACCTTAGAAGGAGAGACGG-GCAGTTTTTCGGAGAGCGATCCACAAGCTGGCTCCGCTGCCAATT-----------------------GGTT-GAAGCCG--TGGAGGCATTTAATGGGGACGGTGT--T----------AGCTGAATCTATG-------TTA------TATAGTTGT----T-TATTGGT-----------TTTTTTGTCGATGTATGAACAAGGACAA----------------------CA-------T--TTTAAAG-------TAT--AGTGTAAGTTAG-TTTAGTGCGAAGGCGGGAGCATAAT-AAAGCT--CTC
dp5 Unknown_singleton_1180:7545-7811 - AG-----TGGCTCCTCGGAAGGGTGG----AAT-AACCGCCGGGCAGGACGGAAGGGTCAGAGTGGTCGACCTAAGGACGAGCAGCGGAGCCACGTTCAGGAGACCAATTCACAAGTTGGCGCTTCTGCCACTG-----------------------GTTT-GAAGCCT--TCCAGGCCTTCAACGGGGCCGGTAT--A----------GCGCCATTTG-G-CGTATAATCTGTATTAT--A---ATGATTAT------TA--------------------------------GGATCG----------------------AA-------TTTTATGAAG-------TCT--AGTGTAAGTTAT-ACTAGGGCAAA-GCGGGAGCGCAATAAAAGCT--CAC
droPer2 scaffold_1805:1216-1465 + AG-----GGGCTCCTCGGAAGGGTGGTCGTTACAACCCGCCGGGCAGGACGGAAGGGTCAGAGTGGTCGACCTAAGGACGAGCAGCGGAGCCACGTTCAGGAGGCCAATCCACAAGTTGGCTCTTCTGCCACTG-----------------------GTTT-GAAGCCT--TCCAGGCCTTCAACGGGGCCGGTGT--A----------TAA-TACTTGT---T-----AT----------------------------TA--------------------------------GGATCG----------------------TA-------TTTTATGAAG-------TCT--AGTGTAAGTTAG-GCTAGGGCAAA-GCGGGAGCGCAATATAAGCTCGCTC
droWil2 scf2_1100000004961:631240-631485 + AG-----TGGATGACGGCTCGAGTGGTAGCCAC-AAGCGTCGCGGCGGACGGCGCAATCAGGGTCGTCGACGTTAAAACGTCGGAAGGG-TCGACCTACAAAGAGCGATTCACAAATTGGCACCCTTGCCGATT-----------------------TTTTGAAGGCCT--TATAGCCCTCCAAGGAGGCCGGTGT--T----------AGCGCAGATGAG-CG--CT----------------AGT----G-TATTGTT-----------TGT-----------------------------------------------------------GTCGTCATTTAATGTTTGATGTTGA----AG-TTGGGGGCGA-GCCGAGAGCGTGGG------------
droVir3 scaffold_12958:3078508-3078767 + AG-----TGGCTGATCGGCAGAGTGACGGCAGT-ACATGCAGGAAAGGACGGCGTCGCTAGAGTGGCAGACATTAGGACGGCTAGTGACGTAAATTTTAAGAGACCGATCCACAAGTTGGCTTGGATACCCATG-----------------------GAAC-GAAGCCC--CCAAGCGCTTCATGGTGGCCGGTGT--T----------GGCACAGGTCCG-CG--C---AT--------------T----G-A-ATTA-------AAAAATTA---------ATA-----------TG-------------------AA----------A--CATAAAG-------TCT--AGTGTGTGTTGGGTTTAGGGCGC-TTCGAGAGCGCAAT-AAAGCT--T-T
droMoj3 scaffold_6540:896151-896398 + AG-----TGGATGCTGGGCGTGGTAACGGAAGC-CATAGCCGGCGGAGATGGTAGGGTGCGCGTAGTTGTCATTAAGACAAAATCTGGCAC---CTACAAAAGGCCAATTCATCGCGTTGCCCCGCTGCCAGTCAACTAACTTATACTTAATTATTTTATT-GAAGCCC--TACGGCCTTTCAACGCGGCCGATGT--T----------AAGGCATTTGC---ATATA----------------ATT----G-A----------------AT------------------------TGA----------------------AA-------TGTATTGAAA-------TCT--AGTATAAGA-------------------------AATT-GAAGTA--GTG
droGri2 scaffold_15116:1704234-1704329 + AA-----TGGCCCATGGGTACAATCGTTCGAGT-CTACCATGGAAAAGATAATTTCGTGAGGGTTGTTGACGTGAAAGCCTCCAAAGGA---------------------------------------------------------------------------------------------------ATTCA------------------------------------------------------------------------------------------------------------------------------------------------ACA-------TCT--AG------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droAna3
AG-----TGGATCACCGCCAGGGTCGTCGAGAC-TCACGCCGGCGCGGACGGAAGGGTCAGGGTCGCCGACGTCAGGACTAGTGGAGGAGCAGTATTTAGGAGAGCAGTCCACAAGCTGGCGAGGTTGCCAGTA------------------------GTT-GAAGCCTAAGGAAGGCCTTCAACGGGGCCGGTGT--A----------TAAATAT-TGT---------------------A-----GATAAT------TA--------------------------------AG-TGG----------------------AA-------TTTTATGAAG-------TCT--AGTAGAAGTTAG-TTTAGGGCGGA-GCGGGAGCGCAAGTAAAGCT--CTCSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.........................................................................CAGGACTAGTGGAGGAGCAGT....................................................................................................................................................................................................................................................................................................................2123.006300021
....................................................................GACGTCAGGACTAGTGGAGGAGC.......................................................................................................................................................................................................................................................................................................................2322.505210002
..........................TCGAGAC-TCACGCCGGCGCGGA.................................................................................................................................................................................................................................................................................................................................................................22201.70343400000
........................................................................TCAGGACTAGTGGAGGAGC.......................................................................................................................................................................................................................................................................................................................1921.503000003
................................................................CGCCGACGTCAGGACTAGTGGAGGAGC.......................................................................................................................................................................................................................................................................................................................2721.002000002
.................................................................GCCGACGTCAGGACTAGTGGAGGAGC.......................................................................................................................................................................................................................................................................................................................2621.002000101
......................................................................CGTCAGGACTAGTGGAGGAGC.......................................................................................................................................................................................................................................................................................................................2121.002100010
.....................................................................ACGTCAGGACTAGTGGAGG..........................................................................................................................................................................................................................................................................................................................1921.002200000
...........................CGAGAC-TCACGCCGGCGCGGA.................................................................................................................................................................................................................................................................................................................................................................21200.80161600000
...........................CGAGAC-TCACGCCGGCGCGGACG...............................................................................................................................................................................................................................................................................................................................................................23200.60121200000
......................GTCGTCGAGAC-TCACGCCGGCGCGGAC................................................................................................................................................................................................................................................................................................................................................................27200.55111100000
..........................................................................AGGACTAGTGGAGGAGCAG.....................................................................................................................................................................................................................................................................................................................1920.501100000
...............................................................TCGCCGACGTCAGGACTAGTGG.............................................................................................................................................................................................................................................................................................................................2220.501000001
.........................................................................CAGGACTAGTGGAGGAGCAG.....................................................................................................................................................................................................................................................................................................................2020.501100000
........................................................................TCAGGACTAGTGGAGGAGCAG.....................................................................................................................................................................................................................................................................................................................2120.501100000
...................................................................CGACGTCAGGACTAGTGGAGGAGC.......................................................................................................................................................................................................................................................................................................................2420.501000001
......................................................................CGTCAGGACTAGTGGAGG..........................................................................................................................................................................................................................................................................................................................1820.501100000
.................................................................................................................................CAGTA------------------------GTT-GAAGCCTAAGGAAGGC................................................................................................................................................................................................................................24200.204030010
.................................................................................................................................CAGTA------------------------GTT-GAAGCCTAAGGAAGG.................................................................................................................................................................................................................................23200.204400000
....................................................................................................GAGAGCAGTCCACAAGCTGGC.........................................................................................................................................................................................................................................................................................21200.204000004
............................GAGAC-TCACGCCGGCGCGGAC................................................................................................................................................................................................................................................................................................................................................................21200.153300000
............................................GCGGACGGAAGGGTCAGG....................................................................................................................................................................................................................................................................................................................................................18200.153300000
...........................................................AGGGTCGCCGACGTCAGGACT..................................................................................................................................................................................................................................................................................................................................21200.102000002
.............................................................................................................CCACAAGCTGGCGAGGTTGCC................................................................................................................................................................................................................................................................................21200.102200000
.........................GTCGAGAC-TCACGCCGGCGCGGACGG..............................................................................................................................................................................................................................................................................................................................................................26200.102200000
........GGATCACCGCCAGGGTCGTCG.....................................................................................................................................................................................................................................................................................................................................................................................21200.102200000
.....................................................................................................AGAGCAGTCCACAAGCTGGC.........................................................................................................................................................................................................................................................................................20200.102000002
.G-----TGGATCACCGCCAGGGTCGT.......................................................................................................................................................................................................................................................................................................................................................................................21200.102200000
..................................................GGAAGGGTCAGGGTCGCCGACGTCA.......................................................................................................................................................................................................................................................................................................................................25200.102200000
............................................GCGGACGGAAGGGTCAGGGTCGCCG.............................................................................................................................................................................................................................................................................................................................................25200.102200000
..................................................................................................AGGAGAGCAGTCCACAAGCTGGC.........................................................................................................................................................................................................................................................................................23200.102000002
..........................TCGAGAC-TCACGCCGGCGC....................................................................................................................................................................................................................................................................................................................................................................19200.102200000
.................................................................................................TAGGAGAGCAGTCCACAAGCTGG..........................................................................................................................................................................................................................................................................................23200.102200000
..........................................................................................CAGTATTTAGGAGAGCAGTCCAC.................................................................................................................................................................................................................................................................................................23190.051100000
.......................................................GGTCAGGGTCGCCGACGTCAGGACTA.................................................................................................................................................................................................................................................................................................................................26200.051100000
...................AGGGTCGTCGAGAC-TCACGCCGGCGCG...................................................................................................................................................................................................................................................................................................................................................................27200.051000001
............CACCGCCAGGGTCGTCGAGAC-C...............................................................................................................................................................................................................................................................................................................................................................................22200.051001000
.........................................................TCAGGGTCGCCGACGTCAGGACTAGT...............................................................................................................................................................................................................................................................................................................................26200.051010000
......................GTCGTCGAGAC-TCACGCCGGCGC....................................................................................................................................................................................................................................................................................................................................................................23200.051010000
..................................................................................................................................AGTA------------------------GTT-GAAGCCTAAGGAAGG.................................................................................................................................................................................................................................22200.051100000
..................................................................................................................................................................GAAGCCTAAGGAAGGCCTTCAACGGGGC....................................................................................................................................................................................................................28200.051010000
.........................GTCGAGAC-TCACGCCGGCGCGGACGGA.............................................................................................................................................................................................................................................................................................................................................................27200.051100000
....................................................AAGGGTCAGGGTCGCCGACGT.........................................................................................................................................................................................................................................................................................................................................21200.051100000
........................................................................................................................................................................................................................................................................................................TGG----------------------AA-------TTTTATGAAG-------TCT--AGT...............................................21200.051010000
.............................AGAC-TCACGCCGGCGCGGA.................................................................................................................................................................................................................................................................................................................................................................19200.051010000
.............ACCGCCAGGGTCGTCGAGAC-TCA.............................................................................................................................................................................................................................................................................................................................................................................23200.051100000
.........................................................................................................................................................................................................................................................................................................................................................................................GCGGGAGCGCAAGTAAAGCT--...20200.051100000
....................GGGTCGTCGAGAC-TCACGCCGGCGC....................................................................................................................................................................................................................................................................................................................................................................25200.051100000
................................C-TCACGCCGGCGCGGACGGAAGG..........................................................................................................................................................................................................................................................................................................................................................23200.051100000
................................C-TCACGCCGGCGCGGACGGAAGGG.........................................................................................................................................................................................................................................................................................................................................................24200.051100000
.................................................................................................................................CAGTA------------------------GTT-GAAGCCTAAGGAAG..................................................................................................................................................................................................................................22200.051100000
..........................TCGAGAC-TCACGCCGGCGCGG..................................................................................................................................................................................................................................................................................................................................................................21200.051010000
..................................................................................................AGGAGAGCAGTCCACAAGCTG...........................................................................................................................................................................................................................................................................................21200.051000010
............CACCGCCAGGGTCGTCGAGAC-TCACG...........................................................................................................................................................................................................................................................................................................................................................................26200.051100000
.................................................................................................................................CAGTA------------------------GTT-GAAGCCTAAGGAAGGCC...............................................................................................................................................................................................................................25200.051010000
.........................................................TCAGGGTCGCCGACGTCAGG.....................................................................................................................................................................................................................................................................................................................................20200.051000001
..................................TCACGCCGGCGCGGACGGAAGG..........................................................................................................................................................................................................................................................................................................................................................22200.051100000
........................................CGGCGCGGACGGAAGGGTCAG.....................................................................................................................................................................................................................................................................................................................................................21200.051010000
............................................................................................................TCCACAAGCTGGCGAGGTTGC.................................................................................................................................................................................................................................................................................21200.051010000
......................................................................................................................GGCGAGGTTGCCAGTA------------------------GTT-GA..............................................................................................................................................................................................................................................21200.051000100
.................................................................................................TAGGAGAGCAGTCCACAAGCTGGCGAG......................................................................................................................................................................................................................................................................................27200.051100000
...................................................GAAGGGTCAGGGTCGCCGACGTCAG......................................................................................................................................................................................................................................................................................................................................25200.051100000
..............................GAC-TCACGCCGGCGCGGACG...............................................................................................................................................................................................................................................................................................................................................................20200.051000010
.....................................................................................................................................................................GCCTAAGGAAGGCCTTCAACGGGGCCGG.................................................................................................................................................................................................................28200.051100000
..........................................................CAGGGTCGCCGACGTCAGGACTAGT...............................................................................................................................................................................................................................................................................................................................25200.051000001
...........................CGAGAC-TCACGCCGGCGC....................................................................................................................................................................................................................................................................................................................................................................18200.051100000
...........................................CGCGGACGGAAGGGTCAGGGTCG................................................................................................................................................................................................................................................................................................................................................23200.051100000
.......................................................GGTCAGGGTCGCCGACGTCAG......................................................................................................................................................................................................................................................................................................................................21200.051100000
...................................CACGCCGGCGCGGACGGAAGGGTCAGG....................................................................................................................................................................................................................................................................................................................................................27200.051100000
...........TCACCGCCAGGGTCGTCGAGAC-T...............................................................................................................................................................................................................................................................................................................................................................................23200.051100000
.....................................................AGGGTCAGGGTCGCCGACGTCAGGA....................................................................................................................................................................................................................................................................................................................................25200.051100000
....................................................................................................GAGAGCAGTCCACAAGCTGGCGA.......................................................................................................................................................................................................................................................................................23200.051010000
.........................................................................................................................................................................................................................................................................................................................................................................TAG-TTTAGGGCGGA-GCGGGA...................20200.051100000
......................GTCGTCGAGAC-TCACGCCGGCGCGGACT...............................................................................................................................................................................................................................................................................................................................................................28200.051100000
.................................................................................................TAGGAGAGCAGTCCACAAGCTGGC.........................................................................................................................................................................................................................................................................................24200.051010000
..........................................................CAGGGTCGCCGACGTCAGGAC...................................................................................................................................................................................................................................................................................................................................21200.051000001
.........................................................................................................CAGTCCACAAGCTGGCGAGGTT...................................................................................................................................................................................................................................................................................22200.051100000
droBip1
AG-----TGGCTCACGGGACGAGAAGGAGCAAC-ACACGCCGGCGCGGACGGAAGGGTCAGGGTCGCCGTCGTCCGAACTAGCTCTGGAGCGGAATATAGGAGAGCGGTCCACAAGCTGGCGCGGCTGCCAGTT-----------------------AGTT-GAAGCCTGATGGAGGCCTTCAACGGGGCCGGTGT--A----------AATTGATTTAC---A-----TTT--------------A----T-T-----AAAGTCGAAAAATTT---------GAATT---------ATAGTTATAGCTGAATTGTTTTTGTTAGTTGTTAGTCT------------------------GTTAA-TTT--------------------------ACT--CTTSizeHit CountTotal NormTotal
No Reads
droKik1
AG-----TGGCTCCTGGGAAGGATCGTCGCGAC-GCACGCAGGAGAGGACGGCATGGTCAGGGTCGTCGACCTTAGGAGAAGCGATGGAGCAGTGTTCCGGAGGGCCATCCACAAGCTGGCGCCGCTGCCAGTG-----------------------TCTT-GAAGCCG--TGCAGGCGTTCAACGGGGCCGGTGT--T----------GTCTTAATTGA---G-----ACT------------------------------------AAATT------------------------TG-------------------TA----------T--TTTGTAG-------AAG--AGTGTA----------AGGGCGAAGGCGGGAGCACAAT-AAAGCT--CTCSizeHit CountTotal NormTotal
No Reads
droFic1
AA-----TGGTTGATCGGGAGGATCGTGGCAAC-CCACGCAGGAGAGGACGGTATTGTCAGGATCGTCGAATTGAGGACCAGTGAAGGAGGAATTTATAAGCGGGCCATCCACAAATTGGCGCCGCTTCCAATC-----------------------GGTT-GAAGCCG--GATGGGCCTTCAACGGGGCCGGTGT--T----------GGCTGAAGCCAG-TT--T---T----------T---TTGATTTT------TG-------AAATT------------------------TA-------------------AA----------G--TTTGAAG-------TCT--AGTATAAGTTAG-TTTAGGGCGAAGGCGGGAGCGCAAT-AAAGCT--TTCSizeHit CountTotal NormTotal
No Reads
droEle1
AG-----TGGCTCCTGGGTCGAATCGTCGGGAC-TCACGCAGGGAAGGATGACATGGTCAGGGTCGTCGACG------------GTGGAGGAGTTTTTTGGCGGGCCATCCACAAGCTGGCGCCGCTACCAGT-------------------------------GGCCT--TTCAGGCCTTTAACGGGGCCGGTGT--T----------GGCTCATTTCA---G-----TTT--------------T----T-TATTGAA-----------TT------------------------GACGTACCA-----ATTGTTGAAGCT-------A--TTTGAAG-------TTT--ACTGTAAGTTAG-CTTAAAGCTAAGGCGGGAGCACAAT-AAAGCT--CTCSizeHit CountTotal NormTotal
No Reads
droRho1
AA-----TGGCTCCTCGGCAGAATAGTCACCAG-GCACGCAGGGGAGGACGGCATGGTCAGGGTCGTCGACGTGCGGACTAGTGGAGGAGGCCTTTTCCGGCGGGCCATTCACAAGTTGGCGCCACTTCCAGTA-----------------------TGTT-GAAGCCC--GATGGGTGTTCAACGGGGCCGGTGT--T----------CGCTCAAATTTG-AA-----TGT--------------T----T-A-ATGA----------AAT-----------------------------------------TGTTAAA----------A--CTTGAAG-------TTT--AGTGTAAGTTAG-TTTAGGGCGAAGGCGGGAGCACAAT-AAAGTT--CTASizeHit CountTotal NormTotal
No Reads
droBia1
G----------------------TGAACGGCAC-GCCCGCAGGGGAGGACGGCATGTTCAGGGTCGAGGACGTTAGGACAAGCGGAGGA---GTTTTTCGGCTTGCCCTCCATACATTGACGCCGCTTCTTATA-----------------------TGTT-GAAGCCT----GAACCTTTCAACGGGGCCGCTGT--T----------GGTTAAAGCCATA----------------------------------------------AAATT------------------------A---------------------------------------------------------------AAA-TTTGGGACGAAAGTAGGTACGCAAT-AAAGTA--CTCSizeHit CountTotal NormTotal
No Reads
droTak1
AA-----TGGCTCCTGGGGAGAATCATCGCCAG-GCACGCAGGGGAGGACGGCATGGTCAGGGTCGTCGACGTTAGGACGGGCGCAGGAGGCGTTTTTCGGCGAGCCATCCATAAATTGGCGCCGCTTCCCATT-----------------------TGTT-GAAGCCT----GAAGCGTTCAACGGGGCCGGTGT--T----------GCGAGATTTGA---A-----TTT--------------G----T-A-----------------CT------------------------TG-------------------AA----------G--TTTGAAG-------TTT--AGTGTAAGTTAG-TTTAGGACGAAGGCGGGTGCACAAT-AAAGGT--CTCSizeHit CountTotal NormTotal
No Reads
droEug1
GG-----TGGCTTACAGGCCGCGTGGTGGCAAC-AACAGTCGGTGAGGACGGAAGAGTGCGTGTGGCGGAGGTACGGACGTCAG---GAGGCGTCATCAAGCGCGCCATCCACAAGCTGGCATTGCTGCCAGTAAGCAACGCT---CCTAACGAGGAGGTT-AAAGCGC--CGGAGGCCTTCAACGGGGCCGGAATGTT----------GGAGCAGTAGAT--T--AA----------------GTT----T-TATTGTT-----------AGTTT---------------------CA-------------------AG----------G--ATAGATG-------AAA--AGAAAGAATTAA-TTGAATACGCAGCCGAAATGTAAAC-AAA--------SizeHit CountTotal NormTotal
No Reads
dm3
AG-----TGGCTGCTGGGAATAGTCATCGCGAC-GCACGCACGTGACTACGGCATGGTTC-------TGACCCTAAAAGGAGCGACGGAGCAGTGTTTC-GTGAGCGATTCACAAGCTGGTGCCGCTGTCAGTT-----------------------TGTT-GAAGCCG--TTGAGGCCATCAACGGGCCAGGTTG--AGGTTGAGGTTGGCTGAAGTTGT--------------------AGTGAT----T-TATTGGT-----------TTT---------GTATGAAGT---------------------ACACAAC----------A--TTTTTAG-------TCT--AGTGTAAGTTAG-TTTAAGGCGAA--------------------------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
....................................................CATGGTTC-------TGACCCTAAAAGGAGCGAC............................................................................................................................................................................................................................................................................................................................2716.0060000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................TTC-GTGAGCGATTCACAAGCTGGTG........................................................................................................................................................................................................................................................................................2515.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................GAATAGTCATCGCGAC-GCACGCACG.......................................................................................................................................................................................................................................................................................................................................................................2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................C-GTGAGCGATTCACAAGCTGGTGCCGC....................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000100000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................CCCTAAAAGGAGCGACGGAGCAGTG...................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................GAGGCCATCAACGGGCCAGGTTG--AGGT........................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
......................................................................................................................................................................................................AGGTTGAGGTTGGCTGAC..........................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
..........................................................................................................................................................................................................TGAGGTTGGCTGAAGTTGT--------------------AGTGA............................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
.........................................CGTGACTACGGCATGGTTC-------TGACCCTA.......................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................T--------------------AGTGAT----T-TATTGGT-----------TTT---------GTATGAAG...............................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............GCTGGGAATAGTCATCGC....................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................CGCACGTGACTACGGCATGGTTC-------TG.............................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........CTGCTGGGAATAGTCATCGCGAC-GC..............................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
....................TAGTCATCGCGAC-GCACGCACG.......................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................TC-------TGACCCTAAAAGGAGCGACGGAGCAG.....................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................T-----------------------TGTT-GAAGCCG--TTGAGGCCA..............................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................TGAGCGATTCACAAGCTGGTGCCGC....................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................TGAGCGATTCACAAGCTGGTGA.......................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
...........................................TGACTACGGCATGGTTC-------TGACCCTA.......................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................TCAACGGGCCAGGTTG--AGGTTGAGGG..................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................AGGTTGAGGTTGGCTGACC.........................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
..............................................................................................................................................................................................AGGTTG--AGGTTGAGGTTGGCTG............................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
...........................CGCGAC-GCACGCACGTGACTACGGCA............................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................GCACGTGACTACGGCATGGTTC-------TGA............................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................TCT--AGTGTAAGTTAG-TTTAAGGCGAA--------------------------2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
.....................................CGCACGTGACTACGGCATGGTTC-------...............................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................TTGAGGTTGGCTGAAGTTGT--------------------AGTGA............................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............TGGGAATAGTCATCGCGAC-GCACGCACG.......................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.................................................................................................TC-GTGAGCGATTCACAAGCTGGTGCCG.....................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................TTTAG-------TCT--AGTGTAAGTTAG-TTTAAGGC.............................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................CCCTAAAAGGAGCGACGGAGC.......................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................TTG--AGGTTGAGGTTGGCTGAAGT........................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
.............CTGGGAATAGTCATCGCGAC-GCA.............................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................GCAGTGTTTC-GTGAGCGATTC...................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................TTTC-GTGAGCGATTCACAAGCTGGTGC.......................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
AG-----TGGCTCCTGGGAAGGATCGTCGCGAC-GCACGCAGGAGAGGACGGCAAGGTCAGGGTCGTCGACCTTAGGAGGAGTGATGGAGCCATCTTCCGGAGGGCGATCCACAAGCTGGCGCCGCTGCCGATT-----------------------TGTT-GAAGCCG--TGGAGGCGTTCAACGGGGCCGGTGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
No Reads
droSec2
AATGAGATGGCCTTTGGCGAGAGTCATGCAGTT-GATTCCTGGCAGAGACGGCGTCGCTCGAGTTGCAGAATTGAGGACCGCGTCTGGAGTAA---TAAGGCGGGCAGTGAACAAGCTGTGTCTGCTTCCCCTTGAGGACTC---------------TGTT-GGA---A--GCCAAGCTTCCAACGGGG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
..TGAGATGGCCTTTGGCGAGAGTCATGC.....................................................................................................................................................................................................................................................................................................................................................................................27201.352700270
.....................................................................................................................................TGAGGACTC---------------TGTT-GGA---A--GCCAAGCT...............................................................................................................................................................................................................................25200.651313000
................................................................TGCAGAATTGAGGACCGCGTCTGGAG........................................................................................................................................................................................................................................................................................................................26200.501010000
..........................................................TCGAGTTGCAGAATTGAGGACCGC................................................................................................................................................................................................................................................................................................................................24200.4088000
................................................................TGCAGAATTGAGGACCGCGTCTGGAGT.......................................................................................................................................................................................................................................................................................................................27200.3066000
................................T-GATTCCTGGCAGAGACGGCGTCGC........................................................................................................................................................................................................................................................................................................................................................25200.2555000
................................................................TGCAGAATTGAGGACCGCGTCTGGA.........................................................................................................................................................................................................................................................................................................................25200.2040040
....................GAGTCATGCAGTT-GATTCCTGGCAT....................................................................................................................................................................................................................................................................................................................................................................25200.1022000
........................................................................................................................................GGACTC---------------TGTT-GGA---A--GCCAAGCTTC.............................................................................................................................................................................................................................24200.1020020
.............................................................................................................GAACAAGCTGTGTCTGCTTCC................................................................................................................................................................................................................................................................................21200.1022000
...............................TT-GATTCCTGGCAGAGACGGCG............................................................................................................................................................................................................................................................................................................................................................22200.1020020
............................................................................................................TGAACAAGCTGTGTCTGCTTCCCCTTGC..........................................................................................................................................................................................................................................................................28200.0511000
..TGAGATGGCCTTTGGCGATT............................................................................................................................................................................................................................................................................................................................................................................................20200.0511000
...............................................................................CGCGTCTGGAGTAA---TAAGGCG...........................................................................................................................................................................................................................................................................................................21200.0510010
................................................................TGCAGAATTGAGGACCGCGTCTT...........................................................................................................................................................................................................................................................................................................................23200.0510010
................................................................................................................................CCCCTTGAGGACTC---------------TGTT-GGA---A--GCCA...................................................................................................................................................................................................................................26200.0511000
.........................................................................................................................................GACTC---------------TGTT-GGA---A--GCCAAGCTTCC............................................................................................................................................................................................................................24200.0511000
..........................................................................................................AGTGAACAAGCTGTGTCTGC....................................................................................................................................................................................................................................................................................20200.0511000
....................................TTCCTGGCAGAGACGGCGTCGCTC......................................................................................................................................................................................................................................................................................................................................................24200.0511000
......................................CCTGGCAGAGACGGCGTCGCTCGAGT..................................................................................................................................................................................................................................................................................................................................................26200.0511000
......................................................TCGCTCGAGTTGCAGAATTGAGGACCGC................................................................................................................................................................................................................................................................................................................................28200.0510100
...GAGATGGCCTTTGGCGAGAGTCATGC.....................................................................................................................................................................................................................................................................................................................................................................................26200.0510010
....................................................................GAATTGAGGACCGCGTCTGGAGTAA---..................................................................................................................................................................................................................................................................................................................25200.0511000
..TGAGATGGCCTTTGGCGAGAGTCA........................................................................................................................................................................................................................................................................................................................................................................................24200.0510100
................................................................TGCAGAATTGAGGACCGCGT..............................................................................................................................................................................................................................................................................................................................20200.0510001
................................T-GATTCCTGGCAGAGACGGCGTC..........................................................................................................................................................................................................................................................................................................................................................23200.0510010
........................................................GCTCGAGTTGCAGAATTGAGGACCGC................................................................................................................................................................................................................................................................................................................................26200.0510010
.................................................................................................................................CCCTTGAGGACTC---------------TGTT-GGA---A--GCC....................................................................................................................................................................................................................................24200.0511000
.....................................................................................................................................TGAGGACTC---------------TGTT-GGA---A--GCCA...................................................................................................................................................................................................................................21200.0510100
.......................................................................TTGAGGACCGCGTCTGGAGTAA---TAAG..............................................................................................................................................................................................................................................................................................................26200.0510010
................................................................TGCAGAATTGAGGACCGCG...............................................................................................................................................................................................................................................................................................................................19200.0510010
............TTTGGCGAGAGTCATGCAGTT-GA..............................................................................................................................................................................................................................................................................................................................................................................23200.0510010
................................T-GATTCCTGGCAGAGACGGCGTCG.........................................................................................................................................................................................................................................................................................................................................................24200.0510001
..............................................................................................................................TTCCCCTTGAGGACTC---------------TGTT-GGA---A--GC.....................................................................................................................................................................................................................................26200.0510010
.................................................................GCAGAATTGAGGACCGCGTCTGGTTA.......................................................................................................................................................................................................................................................................................................................26200.0511000
....................GAGTCATGCAGTT-GATTCCTGGCAGT...................................................................................................................................................................................................................................................................................................................................................................26200.0510010
..............TGGCGAGAGTCATGCAGTT-GATTC...........................................................................................................................................................................................................................................................................................................................................................................24200.0511000
droYak3
AG-----TGGCTCCTGGGAAGGATCGTCGCGAC-GCACGCAGGAGAGGACGGCATGGTCAGGGTCGTCTACCTTAGGAGGAGTGATGGAGCCATCTTCCGGGGGGCGATCCACAAGCTGGCGCCGCTGCCGATT-----------------------TGTT-GAAGCCG--TGGAGGCGTTCAACAAGGCCGGTGT--T----------GGCGGAACTCATA-------TTG------T--C-----GG-----------------------T------------------------CA-------------------TT----------GTTTATT--A-------TTT--ATTGTTGGCATG-TTTAGGGCGAAGGCGGGAGCATAAT-AAAGTT--CTCSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
..................AAGGATCGTCGCGAC-GCACGCAGG.......................................................................................................................................................................................................................................................................................................................................................................24209.4018801200001000175
..................AAGGATCGTCGCGAC-GCACGCAG........................................................................................................................................................................................................................................................................................................................................................................23202.90580261000100030
..................AAGGATCGTCGCGAC-GCACGCAGGTT.....................................................................................................................................................................................................................................................................................................................................................................26201.2024000000000024
..................AAGGATCGTCGCGAC-GCACGCAGGAGT....................................................................................................................................................................................................................................................................................................................................................................27201.1523000000000023
..................AAGGATCGTCGCGAC-GCACGCAGGAGA....................................................................................................................................................................................................................................................................................................................................................................27201.0020020000100017
...............................................................................GAGTGATGGAGCCATCTTCCGG.............................................................................................................................................................................................................................................................................................................22200.9018018000000000
.......................TCGTCGCGAC-GCACGCAGGAGAGGA.................................................................................................................................................................................................................................................................................................................................................................25200.8517000000000017
..................AAGGATCGTCGCGAC-GCACGCAGGAGATT..................................................................................................................................................................................................................................................................................................................................................................29200.5511000000000011
..................AAGGATCGTCGCGAC-GCACGCAGGAGAG...................................................................................................................................................................................................................................................................................................................................................................28200.5511000000000011
.............................................................................................TCTTCCGGGGGGCGATCCACAAGCTGG..........................................................................................................................................................................................................................................................................................2720.50100100000000
..................AAGGATCGTCGCGAC-GCACGCA.........................................................................................................................................................................................................................................................................................................................................................................22200.40808000000000
..........................TCGCGAC-GCACGCAGGAGAGGACGGC.............................................................................................................................................................................................................................................................................................................................................................26200.20401300000000
..................AAGGATCGTCGCGAC-GCACGCAGGA......................................................................................................................................................................................................................................................................................................................................................................25200.20404000000000
..................AAGGATCGTCGCGAC-GCACGCAGGAT.....................................................................................................................................................................................................................................................................................................................................................................26200.20403000000001
..................AAGGATCGTCGCGAC-GCACG...........................................................................................................................................................................................................................................................................................................................................................................20200.20404000000000
..................AAGGATCGTCGCGAC-GCACGCAGGAGATA..................................................................................................................................................................................................................................................................................................................................................................29200.15300000000003
.......................TCGTCGCGAC-GCACGCAGGAGAGGAC................................................................................................................................................................................................................................................................................................................................................................26200.15302100000000
.....................................................................................................................TGGCGCCGCTGCCGATT-----------------------TGTT-GAAGC...........................................................................................................................................................................................................................................26200.15300300000000
..........................TCGCGAC-GCACGCAGGAGAGGACGG..............................................................................................................................................................................................................................................................................................................................................................25200.15301110000000
............................................................................................................TCCACAAGCTGGCGCCGCTGCCGA..............................................................................................................................................................................................................................................................................24200.15301110000000
............................................................................................................TCCACAAGCTGGCGCCGCTGCC................................................................................................................................................................................................................................................................................22200.10201100000000
..................AAGGATCGTCGCGAC-GCACGCAGGAGAGG..................................................................................................................................................................................................................................................................................................................................................................29200.10200000000002
..................AAGGATCGTCGCGAC-GCACGCAGGG......................................................................................................................................................................................................................................................................................................................................................................25200.10200000000002
............................................................................................................TCCACAAGCTGGCGCCGCTGCCGAT.............................................................................................................................................................................................................................................................................25200.10202000000000
.....................................................................ACCTTAGGAGGAGTGATGGAGCC......................................................................................................................................................................................................................................................................................................................23200.05100100000000
............................GCGAC-GCACGCAGGAGAGGACGGC.............................................................................................................................................................................................................................................................................................................................................................24200.05100010000000
..........................TCGCGAC-GCACGCAGGAGAGGAC................................................................................................................................................................................................................................................................................................................................................................23200.05100100000000
.......................................................................CTTAGGAGGAGTGATGGAGCC......................................................................................................................................................................................................................................................................................................................21200.05100100000000
.......TGGCTCCTGGGAAGGATCGTCGCG...................................................................................................................................................................................................................................................................................................................................................................................24200.05100100000000
......................................................................................................................................................................................................T----------GGCGGAACTCATA-------TTG------T--C-----GG-----------------------T------------------------.........................................................................................................22200.05101000000000
..................................................................................................................................GATT-----------------------TGTT-GAAGCCG--TGGAGG.................................................................................................................................................................................................................................21200.05101000000000
........................CGTCGCGAC-GCACGCAGG.......................................................................................................................................................................................................................................................................................................................................................................18200.05101000000000
..........CTCCTGGGAAGGATCGTCGCGA..................................................................................................................................................................................................................................................................................................................................................................................22200.05101000000000
..................AAGGATCGTCGCGAC-GCACGCAGGT......................................................................................................................................................................................................................................................................................................................................................................25200.05101000000000
..............................................................................................................................TGCCGATT-----------------------TGTT-GAAGCCG--TGGAG..................................................................................................................................................................................................................................24200.05100100000000
........................CGTCGCGAC-GCACGCAGGAGAGGACG...............................................................................................................................................................................................................................................................................................................................................................26200.05100000000001
.........................................................................................................................................................................................................................TCATA-------TTG------T--C-----GG-----------------------T------------------------CA-------------------TT----------GTTTAT..................................................................23200.05101000000000
.................................................................................................................................CGATT-----------------------TGTT-GAAGCCG--TGGAGGCG...............................................................................................................................................................................................................................24200.05101000000000
...............................................................................................................................................................................................................................................................................................................................................................................TAGGGCGAAGGCGGGAGCATAAT-AAAG.......27200.05101000000000
..............................................................................................................CACAAGCTGGCGCCGCTGCCGATT-----------------------.....................................................................................................................................................................................................................................................24200.05101000000000
.........................GTCGCGAC-GCACGCAGGAGAGGACG...............................................................................................................................................................................................................................................................................................................................................................25200.05100100000000
...........................CGCGAC-GCACGCAGGAGAGGACGGC.............................................................................................................................................................................................................................................................................................................................................................25200.05100010000000
........................CGTCGCGAC-GCACGCAGGAGAGGAC................................................................................................................................................................................................................................................................................................................................................................25200.05100100000000
...........................CGCGAC-GCACGCAGGAGAGGACGG..............................................................................................................................................................................................................................................................................................................................................................24200.05101000000000
............................................................................................................TCCACAAGCTGGCGCCGCTG..................................................................................................................................................................................................................................................................................20200.05101000000000
......................................................................................................................................................................................................T----------GGCGGAACTCATA-------TTG------T--C-----GG-----------------------T------------------------CA-------------------TT----------........................................................................26200.05101000000000
................................................................................AGTGATGGAGCCATCTTCCGG.............................................................................................................................................................................................................................................................................................................21200.05101000000000
.............................................................................................................................................................................................................................................................................................................................................................................TTTAGGGCGAAGGCGGGAGCATA..............23200.05101000000000
.................................................................................................................................CGATT-----------------------TGTT-GAAGCCG--TGGAGGC................................................................................................................................................................................................................................23200.05101000000000
.................................................................................................................................CGATT-----------------------TGTT-GAAGCCG--TGGAGG.................................................................................................................................................................................................................................22200.05101000000000
........................CGTCGCGAC-GCACGCAGGAGAGGACGG..............................................................................................................................................................................................................................................................................................................................................................27200.05100100000000
..........................TCGCGAC-GCACGCAGGAGAGGACGGCA............................................................................................................................................................................................................................................................................................................................................................27200.05101000000000
..............TGGGAAGGATCGTCGCGAC-GCACGCA.........................................................................................................................................................................................................................................................................................................................................................................26200.05100000010000
.................................................................................................................................CGATT-----------------------TGTT-GAAGCCG--TGGAG..................................................................................................................................................................................................................................21200.05100100000000
...............................................................................GAGTGATGGAGCCATCTTCCG..............................................................................................................................................................................................................................................................................................................21200.05101000000000
.......................TCGTCGCGAC-GCACGCAGGAGAGG..................................................................................................................................................................................................................................................................................................................................................................24200.05100010000000
droEre2
AG-----TGGCTGCTGGGAAAATTCGTCGCGAC-GCACGCAGGGGAGGACGGCA---------TCGTCGACCTTAGAAGGAGAGACGG-GCAGTTTTTCGGAGAGCGATCCACAAGCTGGCTCCGCTGCCAATT-----------------------GGTT-GAAGCCG--TGGAGGCATTTAATGGGGACGGTGT--T----------AGCTGAATCTATG-------TTA------TATAGTTGT----T-TATTGGT-----------TTTTTTGTCGATGTATGAACAAGGACAA----------------------CA-------T--TTTAAAG-------TAT--AGTGTAAGTTAG-TTTAGTGCGAAGGCGGGAGCATAAT-AAAGCT--CTCSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
No Reads
dp5
AG-----TGGCTCCTCGGAAGGGTGG----AAT-AACCGCCGGGCAGGACGGAAGGGTCAGAGTGGTCGACCTAAGGACGAGCAGCGGAGCCACGTTCAGGAGACCAATTCACAAGTTGGCGCTTCTGCCACTG-----------------------GTTT-GAAGCCT--TCCAGGCCTTCAACGGGGCCGGTAT--A----------GCGCCATTTG-G-CGTATAATCTGTATTAT--A---ATGATTAT------TA--------------------------------GGATCG----------------------AA-------TTTTATGAAG-------TCT--AGTGTAAGTTAT-ACTAGGGCAAA-GCGGGAGCGCAATAAAAGCT--CACSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...........................................................AGAGTGGTCGACCTAAGGACGA.................................................................................................................................................................................................................................................................................................................................22137.239438410401100
...........................................................AGAGTGGTCGACCTAAGGACGAG................................................................................................................................................................................................................................................................................................................................23135.086616500000000
...........................................................AGAGTGGTCGACCTAAGGACGAGC...............................................................................................................................................................................................................................................................................................................................24134.545905510003000
.........................................................TCAGAGTGGTCGACCTAAGGACGAGC...............................................................................................................................................................................................................................................................................................................................26122.6732014000011160
..............................................................................................................................TGCCACTG-----------------------GTTT-GAAGCCT--TCCAGGCCT..............................................................................................................................................................................................................................2852.601301300000000
...........................................................AGAGTGGTCGACCTAAGGACG..................................................................................................................................................................................................................................................................................................................................21132.232902800100000
..................................................................................................................................ACTG-----------------------GTTT-GAAGCCT--TCCAGGC................................................................................................................................................................................................................................2262.171301210000000
.........................................................TCAGAGTGGTCGACCTAAGGACGAG................................................................................................................................................................................................................................................................................................................................25122.172601510100810
...............................................................TGGTCGACCTAAGGACGAGCAGCGG..........................................................................................................................................................................................................................................................................................................................25152.133205000002430
................................T-AACCGCCGGGCAGGACGGAAGGG.........................................................................................................................................................................................................................................................................................................................................................2432.0060200000400
..........................................................CAGAGTGGTCGACCTAAGGACGA.................................................................................................................................................................................................................................................................................................................................23131.692201400001700
.........................................................TCAGAGTGGTCGACCTAAGGACGA.................................................................................................................................................................................................................................................................................................................................24121.501801110000600
...............................................................TGGTCGACCTAAGGACGAGCAGCGGA.........................................................................................................................................................................................................................................................................................................................26151.472200000001750
..................................................................................................................................ACTG-----------------------GTTT-GAAGCCT--TCCAGGCC...............................................................................................................................................................................................................................2361.3380800000000
...............................................................TGGTCGACCTAAGGACGAGCAGCGGAG........................................................................................................................................................................................................................................................................................................................27151.332000000001460
..................................................................................................................................ACTG-----------------------GTTT-GAAGCCT--TCCAGG.................................................................................................................................................................................................................................2161.3380800000000
.................................................................GTCGACCTAAGGACGAGCAGCGG..........................................................................................................................................................................................................................................................................................................................23151.271901300000600
...........................................................AGAGTGGTCGACCTAAGGACGAGCA..............................................................................................................................................................................................................................................................................................................................25121.171401110002000
..................................................................................................................................ACTG-----------------------GTTT-GAAGCCT--TCCAGGCCT..............................................................................................................................................................................................................................2461.1770700000000
............................................................GAGTGGTCGACCTAAGGACGAGC...............................................................................................................................................................................................................................................................................................................................23131.081401100000210
.................................................................GTCGACCTAAGGACGAGCAGCGGAG........................................................................................................................................................................................................................................................................................................................25151.00150700000530
..........................................................CAGAGTGGTCGACCTAAGGACGAG................................................................................................................................................................................................................................................................................................................................24131.00130900002200
.........................................................TCAGAGTGGTCGACCTAAGGACG..................................................................................................................................................................................................................................................................................................................................23121.00120700000320
................................T-AACCGCCGGGCAGGACGGAAGG..........................................................................................................................................................................................................................................................................................................................................................2331.0030100000200
............................................................................................................................................................................................................................G-CGTATAATCTGTATTAT--A---ATGA.........................................................................................................................................................2331.0030000000300
.................................................................GTCGACCTAAGGACGAGCAGCGGA.........................................................................................................................................................................................................................................................................................................................24150.871302000001010
..............................................................................................................................TGCCACTG-----------------------GTTT-GAAGCCT--TCCAGG.................................................................................................................................................................................................................................2550.8040400000000
............................................................GAGTGGTCGACCTAAGGACGAG................................................................................................................................................................................................................................................................................................................................22130.771001000000000
............................................................GAGTGGTCGACCTAAGGACGA.................................................................................................................................................................................................................................................................................................................................21130.6990900000000
..........................................................CAGAGTGGTCGACCTAAGGACGAGC...............................................................................................................................................................................................................................................................................................................................25130.6990600000111
................................................................................................................................CCACTG-----------------------GTTT-GAAGCCT--TCCAGG.................................................................................................................................................................................................................................2360.6740400000000
..........................................................CAGAGTGGTCGACCTAAGGACG..................................................................................................................................................................................................................................................................................................................................22130.6280700000100
...........................................................................................................................TTCTGCCACTG-----------------------GTTT-GAAGCCT--T......................................................................................................................................................................................................................................2350.6030300000000
...........................................................................................................................TTCTGCCACTG-----------------------GTTT-GAAGCCT--TC.....................................................................................................................................................................................................................................2450.6030300000000
...........................................................AGAGTGGTCGACCTAAGGAC...................................................................................................................................................................................................................................................................................................................................20180.56100820000000
...............................................................................................................................................................................................................................................................................................................................................................................TAGGGCAAA-GCGGGAGCGCAATAA..........24200.551100000001100
.....................................................................................................................TGGCGCTTCTGCCACTG-----------------------GTTT-GAAG............................................................................................................................................................................................................................................2540.5020200000000
................................................................................................TCAGGAGACCAATTCACAAGTTGG..........................................................................................................................................................................................................................................................................................2420.5010000000010
.............................................................................................................................................................................................................................................................................................................................................................................ACTAGGGCAAA-GCGGGAGCGCA..............2220.5010000000100
............................................................................................ACGTTCAGGAGACCAATTCACAAGG.............................................................................................................................................................................................................................................................................................2520.5010000000100
.................................................................................................................................................................................................................................................................................................................................................................GTGTAAGTTAT-ACTAGGGCAAA-G........................2320.5010100000000
.................................................................................................................................CACTG-----------------------GTTT-GAAGCCT--TCCAGGCCT..............................................................................................................................................................................................................................2560.5030300000000
..........................................................CAGAGTGGTCGACCTAAGGAC...................................................................................................................................................................................................................................................................................................................................21180.5090900000000
....................................................AAGGGTCAGAGTGGTCGACCTAAGG.....................................................................................................................................................................................................................................................................................................................................25170.4780800000000
.................................................................GTCGACCTAAGGACGAGCAGCGGAGC.......................................................................................................................................................................................................................................................................................................................26150.4770100000060
........................................................................TAAGGACGAGCAGCGGAGCC......................................................................................................................................................................................................................................................................................................................20200.4590200000250
.................................................................GTCGACCTAAGGACGAGCAGC............................................................................................................................................................................................................................................................................................................................21150.4060600000000
............................................................................................................................TCTGCCACTG-----------------------GTTT-GAAGCCT--TCCAGG.................................................................................................................................................................................................................................2750.4020200000000
............................................................................................................................TCTGCCACTG-----------------------GTTT-GAAGCCT--T......................................................................................................................................................................................................................................2250.4020200000000
....................................................................................................................................................................................................................................ATCTGTATTAT--A---ATGATTAT------TA--------------------------------GGA..........................................................................................................2530.3310000000100
.............................................................................................................................................................................................................................................................................................................................................................................ACTAGGGCAAA-GCGGGAGC.................1930.3310100000000
................................T-AACCGCCGGGCAGGACGGAAAA..........................................................................................................................................................................................................................................................................................................................................................2330.3310100000000
...................................................................................................................................CTG-----------------------GTTT-GAAGCCT--TCCAGGCC...............................................................................................................................................................................................................................2260.3320200000000
...............................AT-AACCGCCGGGCAGGACGGAAGGGT........................................................................................................................................................................................................................................................................................................................................................2630.3310000000100
................................T-AACCGCCGGGCAGGACGG..............................................................................................................................................................................................................................................................................................................................................................1930.3310100000000
...................................................................................................................................CTG-----------------------GTTT-GAAGCCT--TCCAGG.................................................................................................................................................................................................................................2060.3320200000000
........................................................................TAAGGACGAGCAGCGGAGCCACGT..................................................................................................................................................................................................................................................................................................................24200.3060000002040
...........................................................AGAGTGGTCGACCTAAGGACGAGA...............................................................................................................................................................................................................................................................................................................................24140.2940400000000
................................................................GGTCGACCTAAGGACGAGCAGC............................................................................................................................................................................................................................................................................................................................22150.2740400000000
...............................................................TGGTCGACCTAAGGACGAGCAGC............................................................................................................................................................................................................................................................................................................................23150.2740400000000
......................................................................................................................GGCGCTTCTGCCACTG-----------------------GTTT-GAA.............................................................................................................................................................................................................................................2340.2510100000000
................................T-AACCGCCGGGCAGGACGGAAGAA.........................................................................................................................................................................................................................................................................................................................................................2440.2510010000000
......................................................................................................................GGCGCTTCTGCCACTG-----------------------GTTT-GAAG............................................................................................................................................................................................................................................2440.2510100000000
.....................................................................................................................TGGCGCTTCTGCCACTG-----------------------GTTT-GAAGC...........................................................................................................................................................................................................................................2640.2510100000000
....................................................AAGGGTCAGAGTGGTCGACCTA........................................................................................................................................................................................................................................................................................................................................22170.2440400000000
....................................................AAGGGTCAGAGTGGTCGACCTAAGGA....................................................................................................................................................................................................................................................................................................................................26170.2440400000000
.........................................................TCAGAGTGGTCGACCTAAGGAC...................................................................................................................................................................................................................................................................................................................................22170.2440400000000
...........................................................AGAGTGGTCGACCTAAGGACGT.................................................................................................................................................................................................................................................................................................................................22130.2330300000000
..........................................................................................................................CTTCTGCCACTG-----------------------GTTT-GAAGCCT--T......................................................................................................................................................................................................................................2450.2010100000000
...........................................................................................................................TTCTGCCACTG-----------------------GTTT-GAAGCC..........................................................................................................................................................................................................................................2150.2010100000000
...................................................................................................................GTTGGCGCTTCTGCCACTG-----------------------GTTT-A...............................................................................................................................................................................................................................................2450.2010010000000
...............................................................TGGTCGACCTAAGGACGAGCAGCGGAGC.......................................................................................................................................................................................................................................................................................................................28150.2030000000300
..............................................................................................................................TGCCACTG-----------------------GTTT-GAAGCCT--TCCAGGCCTT.............................................................................................................................................................................................................................2950.2010010000000
..........................................................................................................................CTTCTGCCACTG-----------------------GTTT-GAAGC...........................................................................................................................................................................................................................................2150.2010100000000
.............................................................................................................................CTGCCACTG-----------------------GTTT-GAAGCCT--T......................................................................................................................................................................................................................................2150.2010100000000
...............................................................TGGTCGACCTAAGGACGAGCAGCGGAA........................................................................................................................................................................................................................................................................................................................27150.2030000000120
..............................................................................................................................TGCCACTG-----------------------GTTT-GAAGCCT--TCC....................................................................................................................................................................................................................................2250.2010100000000
.............................................................................................................................CTGCCACTG-----------------------GTTT-GAAGCCT--TCCAGG.................................................................................................................................................................................................................................2650.2010100000000
.....................................................................................................................TGGCGCTTCTGCCACTG-----------------------GTTT-................................................................................................................................................................................................................................................2150.2010100000000
...............................................................TGGTCGACCTAAGGACGAGCAGCG...........................................................................................................................................................................................................................................................................................................................24150.2030000000300
..............................................................................................................................TGCCACTG-----------------------GTTT-GAAGCCT--TCCAGGC................................................................................................................................................................................................................................2650.2010100000000
.............................................................................................................................CTGCCACTG-----------------------GTTT-GAAGCCT--TCC....................................................................................................................................................................................................................................2350.2010100000000
..................................................................TCGACCTAAGGACGAGCAGC............................................................................................................................................................................................................................................................................................................................20150.2030300000000
............................................................................................................................TCTGCCACTG-----------------------GTTT-GAAGCCT--TC.....................................................................................................................................................................................................................................2350.2010100000000
.............................................................................................................TCACAAGTTGGCGCTTCTGCCAC..............................................................................................................................................................................................................................................................................2350.2010100000000
..................................................................TCGACCTAAGGACGAGCAGCGGAG........................................................................................................................................................................................................................................................................................................................24150.2030200000100
............................................................................................................................TCTGCCACTG-----------------------GTTT-GAAGCCT--TCC....................................................................................................................................................................................................................................2450.2010100000000
...............................................................TGGTCGACCTAAGGACGAGCAAA............................................................................................................................................................................................................................................................................................................................23160.1930000000300
...........................................................AGAGTGGTCGACCTAAGGACGAGCAGC............................................................................................................................................................................................................................................................................................................................27110.1820100001000
....................................................AAGGGTCAGAGTGGTCGACC..........................................................................................................................................................................................................................................................................................................................................20170.1830300000000
......................................................GGGTCAGAGTGGTCGACCTAAGGA....................................................................................................................................................................................................................................................................................................................................24170.1830000000300
....................................................AAGGGTCAGAGTGGTCGAC...........................................................................................................................................................................................................................................................................................................................................19170.1830300000000
..................................................................................................................................ACTG-----------------------GTTT-GAAGCCT--TCCAGGA................................................................................................................................................................................................................................2260.1710100000000
...............................................................................................................................GCCACTG-----------------------GTTT-GAAGCCT--TC.....................................................................................................................................................................................................................................2060.1710100000000
................................................................................................................................CCACTG-----------------------GTTT-GAAGCCT--TCCAGGCC...............................................................................................................................................................................................................................2560.1710010000000
............................................................................................................TTCACAAGTTGGCGCTTCTG..................................................................................................................................................................................................................................................................................2060.1710100000000
.................................................................GTCGACCTAAGGACGAGCAGCGGAGCC......................................................................................................................................................................................................................................................................................................................27120.1720200000000
...................................................................................................................................CTG-----------------------GTTT-GAAGCCT--TCCAGGCCT..............................................................................................................................................................................................................................2360.1710100000000
...............................................................................................................................GCCACTG-----------------------GTTT-GAAGCCT--TCCAGGCCTT.............................................................................................................................................................................................................................2860.1710100000000
................................................................................................................................CCACTG-----------------------GTTT-GAAGCCT--TCCAGGCCT..............................................................................................................................................................................................................................2660.1710100000000
................................................................................................................................CCACTG-----------------------GTTT-GAAGCCT--TCCAGGCCTT.............................................................................................................................................................................................................................2760.1710100000000
................................................................................................................................CCACTG-----------------------GTTT-GAAGCCT--TCCAGGC................................................................................................................................................................................................................................2460.1710100000000
..........................................................................................................AATTCACAAGTTGGCGCTTC....................................................................................................................................................................................................................................................................................2060.1710100000000
..................................................................................................................................ACTG-----------------------GTTT-GAAGCCT--TCCA...................................................................................................................................................................................................................................1960.1710100000000
.........................................................TCAGAGTGGTCGACCTAAGGACGT.................................................................................................................................................................................................................................................................................................................................24120.1720110000000
............................................................................................................TTCACAAGTTGGCGCTTCT...................................................................................................................................................................................................................................................................................1960.1710100000000
..........................................................................................................AATTCACAAGTTGGCGCTTCTG..................................................................................................................................................................................................................................................................................2260.1710000000100
................................................................................................................................CCACTG-----------------------GTTT-GAAGCCT--TCC....................................................................................................................................................................................................................................2060.1710100000000
............................................................GAGTGGTCGACCTAAGGACG..................................................................................................................................................................................................................................................................................................................................20130.1520200000000
...........................................................AGAGTGGTCGACCTAAGGACGG.................................................................................................................................................................................................................................................................................................................................22130.1520200000000
....................................................................................................................................TG-----------------------GTTT-GAAGCCT--TCCAGGCCTTCAA..........................................................................................................................................................................................................................26200.1530300000000
..........................................................................AGGACGAGCAGCGGAGCC......................................................................................................................................................................................................................................................................................................................18200.1530300000000
....................................................................................................................................TG-----------------------GTTT-GAAGCCT--TCCAGGCCTTC............................................................................................................................................................................................................................24200.1530300000000
........................................................................TAAGGACGAGCAGCGGAGC.......................................................................................................................................................................................................................................................................................................................19200.1530200000010
.........................................................TCAGAGTGGTCGACCTAAGGACGAAA...............................................................................................................................................................................................................................................................................................................................26140.1420200000000
............................................................................................................................................................................................................................................................T------TA--------------------------------GGATCG----------------------AA-------TTTTATGAAG-------TC.....................................................2370.1410100000000
..................................................GGAAGGGTCAGAGTGGTCGACA..........................................................................................................................................................................................................................................................................................................................................22150.1320000000200
...........................................................AGAGTGGTCGACCTAAGGACGAAA...............................................................................................................................................................................................................................................................................................................................24150.1320110000000
.................................................................GTCGACCTAAGGACGAGCAGCG...........................................................................................................................................................................................................................................................................................................................22150.1320200000000
...............................................................TGGTCGACCTAAGGACGAGCAG.............................................................................................................................................................................................................................................................................................................................22150.1320200000000
................................................................GGTCGACCTAAGGACGAGCAGCGGA.........................................................................................................................................................................................................................................................................................................................25150.1320000000200
..................................................................TCGACCTAAGGACGAGCAGCGGAGC.......................................................................................................................................................................................................................................................................................................................25150.1320000000110
..................................................GGAAGGGTCAGAGTGGTCGACC..........................................................................................................................................................................................................................................................................................................................................22150.1320200000000
...................................................................CGACCTAAGGACGAGCAGCGG..........................................................................................................................................................................................................................................................................................................................21150.1320100000010
..................................................GGAAGGGTCAGAGTGGTCGAC...........................................................................................................................................................................................................................................................................................................................................21150.1320100000100
....................................................................................................................................................................................................................................ATCTGTATTAT--A---ATG..........................................................................................................................................................1580.1310000000100
.................................................................................................................................................................................................................................................................................................................................AA-------TTTTATGAAG-------TCT--AGTGTAAG..........................................2380.1310100000000
.................................................................GTCGACCTAAGGACGAGC...............................................................................................................................................................................................................................................................................................................................18170.1220200000000
....................................................AAGGGTCAGAGTGGTCGACAA.........................................................................................................................................................................................................................................................................................................................................21170.1220200000000
.........................................................TCAGAGTGGTCGACCTAAGG.....................................................................................................................................................................................................................................................................................................................................20170.1220010100000
.........................................................TCAGAGTGGTCGACCTAAGGA....................................................................................................................................................................................................................................................................................................................................21170.1220100000100
....................................................AAGGGTCAGAGTGGTCGACCTAA.......................................................................................................................................................................................................................................................................................................................................23170.1220100000100
...........................................................AGAGTGGTCGACCTAAGGA....................................................................................................................................................................................................................................................................................................................................19180.1120200000000
..........................................................CAGAGTGGTCGACCTAAGGA....................................................................................................................................................................................................................................................................................................................................20180.1120200000000
...........................................................AGAGTGGTCGACCTAAGG.....................................................................................................................................................................................................................................................................................................................................18180.1120200000000
................................................ACGGAAGGGTCAGAGTGGTC..............................................................................................................................................................................................................................................................................................................................................20200.1020100100000
...........................................GCAGGACGGAAGGGTCAGAGTGG................................................................................................................................................................................................................................................................................................................................................23200.1020200000000
........................................................................TAAGGACGAGCAGCGGAGCCA.....................................................................................................................................................................................................................................................................................................................21200.1020100000010
.......................................................................CTAAGGACGAGCAGCGGAGC.......................................................................................................................................................................................................................................................................................................................20200.1021000000010
.......................................................................CTAAGGACGAGCAGCGGAG........................................................................................................................................................................................................................................................................................................................19200.1020000000020
........................................................................TAAGGACGAGCAGCGGAGCCACG...................................................................................................................................................................................................................................................................................................................23200.1020000000200
...................................................................................................................................................................AAGCCT--TCCAGGCCTTCAACGGGG.....................................................................................................................................................................................................................24200.1020200000000
...............................................................................................................................................................................................................................................................................................................................................................................TAGGGCAAA-GCGGGAGCGCAATA...........23200.1020000000200
............................................................GAGTGGTCGACCTAAGGACGAGCAG.............................................................................................................................................................................................................................................................................................................................25110.0910000000010
...........................................................AGAGTGGTCGACCTAAGGACGAGCAG.............................................................................................................................................................................................................................................................................................................................26110.0910100000000
..........................................................CAGAGTGGTCGACCTAAGGACGAGCAG.............................................................................................................................................................................................................................................................................................................................27110.0910100000000
.........................................................TCAGAGTGGTCGACCTAAGGACGAGCA..............................................................................................................................................................................................................................................................................................................................27110.0910100000000
............................................................GAGTGGTCGACCTAAGGACGAGCA..............................................................................................................................................................................................................................................................................................................................24120.0810100000000
...........................................................AGAGTGGTCGACCTAAGGACGAGCAA.............................................................................................................................................................................................................................................................................................................................26120.0810100000000
..................................................................TCGACCTAAGGACGAGCAGCGGAGCC......................................................................................................................................................................................................................................................................................................................26120.0810100000000
.....................................................................ACCTAAGGACGAGCAGCGGAGCCA.....................................................................................................................................................................................................................................................................................................................24120.0810100000000
...........................................................AGAGTGGTCGACCTAAGGACGC.................................................................................................................................................................................................................................................................................................................................22130.0810000100000
.............................................................AGTGGTCGACCTAAGGACGAG................................................................................................................................................................................................................................................................................................................................21130.0810100000000
..........................................................CAGAGTGGTCGACCTAAGGACGT.................................................................................................................................................................................................................................................................................................................................23130.0810100000000
.............................................................AGTGGTCGACCTAAGGACGA.................................................................................................................................................................................................................................................................................................................................20130.0810100000000
...........................................................AGAGTGGTCGACCTAAGGACGAA................................................................................................................................................................................................................................................................................................................................23140.0710100000000
......................................................................CCTAAGGACGAGCAGCGGAGC.......................................................................................................................................................................................................................................................................................................................21150.0710100000000
..................................................GGAAGGGTCAGAGTGGTCGACCTAAG......................................................................................................................................................................................................................................................................................................................................26150.0710100000000
...............................................................TGGTCGACCTAAGGACGAGCAGA............................................................................................................................................................................................................................................................................................................................23150.0710100000000
................................................................GGTCGACCTAAGGACGAGCAG.............................................................................................................................................................................................................................................................................................................................21150.0710100000000
..................................................................TCGACCTAAGGACGAGCAGCGG..........................................................................................................................................................................................................................................................................................................................22150.0710000000100
.................................................................GTCGACCTAAGGACGAGCAGCGGAA........................................................................................................................................................................................................................................................................................................................25150.0710000000100
..................................................................TCGACCTAAGGACGAGCAGCGGA.........................................................................................................................................................................................................................................................................................................................23150.0710000000100
...............................................................TGGTCGACCTAAGGACGAGCAGCGGTC........................................................................................................................................................................................................................................................................................................................27150.0710010000000
...................................................................CGACCTAAGGACGAGCAGCGGA.........................................................................................................................................................................................................................................................................................................................22150.0710000000100
...............................................................TGGTCGACCTAAGGACGAGCAGCGA..........................................................................................................................................................................................................................................................................................................................25150.0710100000000
.................................................................GTCGACCTAAGGACGAGCAG.............................................................................................................................................................................................................................................................................................................................20150.0710000100000
...................................................................CGACCTAAGGACGAGCAGCGGAG........................................................................................................................................................................................................................................................................................................................23150.0710000000010
......................................................................CCTAAGGACGAGCAGCGGAG........................................................................................................................................................................................................................................................................................................................20150.0710000000100
..................................................................TCGACCTAAGGACGAGCAG.............................................................................................................................................................................................................................................................................................................................19150.0710100000000
...............................................................TGGTCGACCTAAGGACGAGCAGCGT..........................................................................................................................................................................................................................................................................................................................25150.0710100000000
..............................................................................................................CACAAGTTGGCGCTTCTGCC................................................................................................................................................................................................................................................................................20160.0610100000000
..............................................................GTGGTCGACCTAAGGACGAGC...............................................................................................................................................................................................................................................................................................................................21160.0610100000000
.................................................................GTCGACCTAAGGACGAGCA..............................................................................................................................................................................................................................................................................................................................19160.0610100000000
................................................................GGTCGACCTAAGGACGAGCAA.............................................................................................................................................................................................................................................................................................................................21160.0610100000000
...............................................................TGGTCGACCTAAGGACGAGCA..............................................................................................................................................................................................................................................................................................................................21160.0610100000000
.....................................................AGGGTCAGAGTGGTCGACCTAAG......................................................................................................................................................................................................................................................................................................................................23170.0610100000000
....................................................AAGGGTCAGAGTGGTCGACAAC........................................................................................................................................................................................................................................................................................................................................22170.0610000000100
........................................................GTCAGAGTGGTCGACCTAAGGAC...................................................................................................................................................................................................................................................................................................................................23170.0610100000000
................................................................GGTCGACCTAAGGACGAGC...............................................................................................................................................................................................................................................................................................................................19170.0610100000000
.................................................................GTCGACCTAAGGACGAGT...............................................................................................................................................................................................................................................................................................................................18170.0610100000000
...............................................................TGGTCGACCTAAGGACGAG................................................................................................................................................................................................................................................................................................................................19170.0610100000000
....................................................AAGGGTCAGAGTGGTCGACCT.........................................................................................................................................................................................................................................................................................................................................21170.0610100000000
...............................................................TGGTCGACCTAAGGACGAGC...............................................................................................................................................................................................................................................................................................................................20170.0610100000000
....................................................AAGGGTCAGAGTGGTCGACCTAAG......................................................................................................................................................................................................................................................................................................................................24170.0610100000000
...........................................................AGAGTGGTCGACCTAAGGAA...................................................................................................................................................................................................................................................................................................................................20180.0610100000000
..........................................................CAGAGTGGTCGACCTAAG......................................................................................................................................................................................................................................................................................................................................18180.0610100000000
.......TGGCTCCTCGGAAGGGTG.........................................................................................................................................................................................................................................................................................................................................................................................18190.0510100000000
AG-----TGGCTCCTCGGAAGGGT..........................................................................................................................................................................................................................................................................................................................................................................................19190.0510100000000
.......................................CCGGGCAGGACGGAAGGGTCA......................................................................................................................................................................................................................................................................................................................................................21200.0510100000000
...........................................GCAGGACGGAAGGGTCAGAGT..................................................................................................................................................................................................................................................................................................................................................21200.0510100000000
....................................CCGCCGGGCAGGACGGAAGG..........................................................................................................................................................................................................................................................................................................................................................20200.0510100000000
..............................................................................................................................................................................................................................................................................................................................................ATGAAG-------TCT--AGTGTAAGTTA.......................................20200.0510000010000
.......................................................................CTAAGGACGAGCAGCGGAGCC......................................................................................................................................................................................................................................................................................................................21200.0510010000000
...........................................................................................................................................................................................................................................................................................................................................TTTATGAAG-------TCT--AGTGTAAGT.........................................21200.0510100000000
..........................................................................AGGACGAGCAGCGGAGCCACGT..................................................................................................................................................................................................................................................................................................................22200.0510100000000
....................................................................................................................................................................................................................................................................................................................................................................................CAAA-GCGGGAGCGCAATAAAAGC......23200.0510100000000
........................................................................TAAGGACGAGCAGCGGAGCCGT....................................................................................................................................................................................................................................................................................................................22200.0510000000010
...................................ACCGCCGGGCAGGACGGAAGG..........................................................................................................................................................................................................................................................................................................................................................21200.0510100000000
.......................................................................CTAAGGACGAGCAGCGGAGCCC.....................................................................................................................................................................................................................................................................................................................22200.0510000000010
........................................................................TAAGGACGAGCAGCGGAGCCC.....................................................................................................................................................................................................................................................................................................................21200.0510000000010
........................................................................TAAGGACGAGCAGCGGAAA.......................................................................................................................................................................................................................................................................................................................19200.0510000000100
..................................................GGAAGGGTCAGAGTGGTCGA............................................................................................................................................................................................................................................................................................................................................20200.0510100000000
....................................................................................................................................TG-----------------------GTTT-GAAGCCT--TCCAGGCCTT.............................................................................................................................................................................................................................23200.0510100000000
........................................................................TAAGGACGAGCAGCGGAGCCACGTTC................................................................................................................................................................................................................................................................................................................26200.0510000000100
..............................................................................CGAGCAGCGGAGCCACGTTCAG..............................................................................................................................................................................................................................................................................................................22200.0510000001000
............................................CAGGACGGAAGGGTCAGAGTGGTC..............................................................................................................................................................................................................................................................................................................................................24200.0510100000000
.........................................................................AAGGACGAGCAGCGGAGCCA.....................................................................................................................................................................................................................................................................................................................20200.0510100000000
...............................................................................................................................................................TT-GAAGCCT--TCCAGGCCT..............................................................................................................................................................................................................................18200.0510100000000
...........................................GCAGGACGGAAGGGTCAGAGTG.................................................................................................................................................................................................................................................................................................................................................22200.0510100000000
............................................................................................................................................................................CCAGGCCTTCAACGGGGCGT..................................................................................................................................................................................................................20200.0510100000000
..............................................................................CGAGCAGCGGAGCCACGTTC................................................................................................................................................................................................................................................................................................................20200.0510000001000
........................................................................TAAGGACGAGCAGCGGAGCCACGTC.................................................................................................................................................................................................................................................................................................................25200.0510000000010
.......................................CCGGGCAGGACGGAAGGGTCAG.....................................................................................................................................................................................................................................................................................................................................................22200.0510100000000
..................................AACCGCCGGGCAGGACGGAAGGGAA.......................................................................................................................................................................................................................................................................................................................................................25200.0510100000000
....................................................................................................................................................................AGCCT--TCCAGGCCTTCAACGGGGC....................................................................................................................................................................................................................24200.0510100000000
...............................................................................................................................................................................................................................................................................................................................................................................TAGGGCAAA-GCGGGAGCGCAT.............21200.0510100000000
...............................................................................................................................................................................................................................................................................................................................................................................TAGGGCAAA-GCGGGAGCGCAATAAAA........26200.0510100000000
................................................................................................................................................................T-GAAGCCT--TCCAGGCCTTCAACGGG......................................................................................................................................................................................................................25200.0510100000000
.........................................................................AAGGACGAGCAGCGGAGCCACGTT.................................................................................................................................................................................................................................................................................................................24200.0510100000000
..................................................GGAAGGGTCAGAGTGGTCGAT...........................................................................................................................................................................................................................................................................................................................................21200.0510100000000
....................................................................................................................................TG-----------------------GTTT-GAAGCCT--TCCAGGC................................................................................................................................................................................................................................20200.0510100000000
..................................................................................CAGCGGAGCCACGTTCAGGAG...........................................................................................................................................................................................................................................................................................................21200.0510000001000
....................................................................................................................................TG-----------------------GTTT-GAAGCCT--TCCAGGCCT..............................................................................................................................................................................................................................22200.0510100000000
............................................CAGGACGGAAGGGTCAGAG...................................................................................................................................................................................................................................................................................................................................................19200.0510100000000
droPer2
AG-----GGGCTCCTCGGAAGGGTGGTCGTTACAACCCGCCGGGCAGGACGGAAGGGTCAGAGTGGTCGACCTAAGGACGAGCAGCGGAGCCACGTTCAGGAGGCCAATCCACAAGTTGGCTCTTCTGCCACTG-----------------------GTTT-GAAGCCT--TCCAGGCCTTCAACGGGGCCGGTGT--A----------TAA-TACTTGT---T-----AT----------------------------TA--------------------------------GGATCG----------------------TA-------TTTTATGAAG-------TCT--AGTGTAAGTTAG-GCTAGGGCAAA-GCGGGAGCGCAATATAAGCTCGCTCSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
............................................CAGGACGGAAGGGTCAGAGTGGTC..............................................................................................................................................................................................................................................................................................................................................24200.75150150000
........................................................................TAAGGACGAGCAGCGGAGT.......................................................................................................................................................................................................................................................................................................................19200.102020000
........................................................................TAAGGACGAGCAGCGGAGC.......................................................................................................................................................................................................................................................................................................................19200.102000002
............................................................................................................................TCTGCCACTG-----------------------GTTT-GAAGCCT--TCC....................................................................................................................................................................................................................................24200.051010000
............................................CAGGACGGAAGGGTCAGAGTGG................................................................................................................................................................................................................................................................................................................................................22200.051001000
...............................................................TGGTCGACCTAAGGACGAGCAGC............................................................................................................................................................................................................................................................................................................................23200.051010000
.........................................................................AAGGACGAGCAGCGGAGCA......................................................................................................................................................................................................................................................................................................................19200.051010000
.................................................................................................................................................................................................................................................................................................................................................................GTGTAAGTTAG-GCTAGGGCAAA-G........................23200.051000001
............................................................................................ACGTTCAGGAGGCCAATCCACAAG..............................................................................................................................................................................................................................................................................................24200.051010000
...........................................GCAGGACGGAAGGGTCAGAGTGG................................................................................................................................................................................................................................................................................................................................................23200.051000001
..........................................................................................................................................................................................................................................................................................................................................TTTTATGAAG-------TCT--AGTGT.............................................18200.051010000
..................................................................................CAGCGGAGCCACGTTCAGGAG...........................................................................................................................................................................................................................................................................................................21200.051000100
........................................................................................................................................................................................................................................................................................................TCG----------------------TA-------TTTTATGAAG-------TCT--AGTGTAA...........................................25200.051000001
........................................................................TAAGGACGAGCAGCGGAGCCACG...................................................................................................................................................................................................................................................................................................................23200.051010000
.........................................................................AAGGACGAGCAGCGGAGCC......................................................................................................................................................................................................................................................................................................................19200.051010000
.......................................................................CTAAGGACGAGCAGCGGAGC.......................................................................................................................................................................................................................................................................................................................20200.051000001
...............................................................................................TTCAGGAGGCCAATCCACAAGTTG...........................................................................................................................................................................................................................................................................................24200.051010000
............................................................................................ACGTTCAGGAGGCCAATCCAC.................................................................................................................................................................................................................................................................................................21200.051010000
droWil2
AG-----TGGATGACGGCTCGAGTGGTAGCCAC-AAGCGTCGCGGCGGACGGCGCAATCAGGGTCGTCGACGTTAAAACGTCGGAAGGG-TCGACCTACAAAGAGCGATTCACAAATTGGCACCCTTGCCGATT-----------------------TTTTGAAGGCCT--TATAGCCCTCCAAGGAGGCCGGTGT--T----------AGCGCAGATGAG-CG--CT----------------AGT----G-TATTGTT-----------TGT-----------------------------------------------------------GTCGTCATTTAATGTTTGATGTTGA----AG-TTGGGGGCGA-GCCGAGAGCGTGGG------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
No Reads
droVir3
AG-----TGGCTGATCGGCAGAGTGACGGCAGT-ACATGCAGGAAAGGACGGCGTCGCTAGAGTGGCAGACATTAGGACGGCTAGTGACGTAAATTTTAAGAGACCGATCCACAAGTTGGCTTGGATACCCATG-----------------------GAAC-GAAGCCC--CCAAGCGCTTCATGGTGGCCGGTGT--T----------GGCACAGGTCCG-CG--C---AT--------------T----G-A-ATTA-------AAAAATTA---------ATA-----------TG-------------------AA----------A--CATAAAG-------TCT--AGTGTGTGTTGGGTTTAGGGCGC-TTCGAGAGCGCAAT-AAAGCT--T-TSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
No Reads
droMoj3
AG-----TGGATGCTGGGCGTGGTAACGGAAGC-CATAGCCGGCGGAGATGGTAGGGTGCGCGTAGTTGTCATTAAGACAAAATCTGGCAC---CTACAAAAGGCCAATTCATCGCGTTGCCCCGCTGCCAGTCAACTAACTTATACTTAATTATTTTATT-GAAGCCC--TACGGCCTTTCAACGCGGCCGATGT--T----------AAGGCATTTGC---ATATA----------------ATT----G-A----------------AT------------------------TGA----------------------AA-------TGTATTGAAA-------TCT--AGTATAAGA-------------------------AATT-GAAGTA--GTGSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.......................TAACGGAAGC-CATAGCCGGCGGAGA.................................................................................................................................................................................................................................................................................................................................................................2511.001000010
....................TGGTAACGGAAGC-CATAGCCGGCGG....................................................................................................................................................................................................................................................................................................................................................................2511.001100000
.......................................................GGTGCGCGTAGTTGTCATTAAGACA..................................................................................................................................................................................................................................................................................................................................2540.753300000
..................................................................................................................................................................................TTTCAACGCGGCCGATGT--T----------AAGGCA...........................................................................................................................................................................................25200.55111000010
.......................................................GGTGCGCGTAGTTGTCATTAAGACAAAA...............................................................................................................................................................................................................................................................................................................................2830.331100000
....................................................................................................................................................................................TCAACGCGGCCGATGT--T----------AAGGCATT.........................................................................................................................................................................................25200.306200040
.......................................................GGTGCGCGTAGTTGTCATTAAGACAA.................................................................................................................................................................................................................................................................................................................................2640.251100000
.......................................................GGTGCGCGTAGTTGTCATTAAGACAAA................................................................................................................................................................................................................................................................................................................................2740.251100000
.................................................TGGTAGGGTGCGCGTAGTTGTCATTAA......................................................................................................................................................................................................................................................................................................................................2740.251100000
......................................................................................................................................................................................AACGCGGCCGATGT--T----------AAGGCA...........................................................................................................................................................................................21200.255401000
....................................................................................................................................................................................TCAACGCGGCCGATGT--T----------AAGGCATTTGC---...................................................................................................................................................................................2850.201000001
....................................................................................................................................................................................TCAACGCGGCCGATGT--T----------AAGGCATTTG.......................................................................................................................................................................................27200.204300001
..................................................................................................................................................................................TTTCAACGCGGCCGATGT--T----------AAGGC............................................................................................................................................................................................24200.204400000
...................................................................................................................................................................................TTCAACGCGGCCGATGT--T----------AAGGCATT.........................................................................................................................................................................................26200.204200020
..................................................................................................................................................................................TTTCAACGCGGCCGATGT--T----------AAGGCAT..........................................................................................................................................................................................26200.153300000
..................................................................................................................................................................................TTTCAACGCGGCCGATGT--T----------AAGGCATT.........................................................................................................................................................................................27200.153100020
....................TGGTAACGGAAGC-CATAGCC.........................................................................................................................................................................................................................................................................................................................................................................2070.141000010
....................TGGTAACGGAAGC-CATAGCCG........................................................................................................................................................................................................................................................................................................................................................................2170.141100000
......................................................................................................................................................................................AACGCGGCCGATGT--T----------AAGG.............................................................................................................................................................................................19200.102100100
....................................................................................................................................................................................TCAACGCGGCCGATGT--T----------AAG..............................................................................................................................................................................................20200.102100100
....................................................................................................................................................................................TCAACGCGGCCGATGT--T----------AAGGCATTT........................................................................................................................................................................................26200.102000020
....................................................................................................................................................................................TCAACGCGGCCGATGT--T----------AAGGCAT..........................................................................................................................................................................................24200.102100010
.................................................................................................................................................................................CTTTCAACGCGGCCGATGT--T----------.................................................................................................................................................................................................20200.102100100
.................................................................................................................................................................................CTTTCAACGCGGCCGATG...............................................................................................................................................................................................................18200.051100000
..................................................................................................................................................................................TTTCAACGCGGCCGATGT--T----------AAG..............................................................................................................................................................................................22200.051000100
.................................................................................................................................................................................CTTTCAACGCGGCCGATGT--T----------AAGGC............................................................................................................................................................................................25200.051100000
................................................................................................................................................................................CCTTTCAACGCGGCCGATGT--T----------AA...............................................................................................................................................................................................23200.051100000
................................................................................................................................................................................CCTTTCAACGCGGCCGATGT--T----------A................................................................................................................................................................................................22200.051001000
........................................................................................................................................................................................CGCGGCCGATGT--T----------AAGGCATTTG.......................................................................................................................................................................................23200.051000100
.....................................................................................................................................................................................CAACGCGGCCGATGT--T----------AAGGCA...........................................................................................................................................................................................22200.051100000
.....................................................................................................................................................................................CAACGCGGCCGATGT--T----------AAGGT............................................................................................................................................................................................21200.051100000
................................................................................................................................................................................CCTTTCAACGCGGCCGATGT--T----------AAG..............................................................................................................................................................................................24200.051000100
........................................................................................................................................................................................CGCGGCCGATGT--T----------AAGGCA...........................................................................................................................................................................................19200.051100000
.................................................................................................................................................................................CTTTCAACGCGGCCGATGT--T----------A................................................................................................................................................................................................21200.051001000
.......................................................................................................................................................................................ACGCGGCCGATGT--T----------AAGGCAT..........................................................................................................................................................................................21200.051001000
...................................................................................................................................................................................TTCAACGCGGCCGATGT--T----------AAGGC............................................................................................................................................................................................23200.051100000
droGri2
AA-----TGGCCCATGGGTACAATCGTTCGAGT-CTACCATGGAAAAGATAATTTCGTGAGGGTTGTTGACGTGAAAGCCTCCAAAGGA---------------------------------------------------------------------------------------------------ATTCA------------------------------------------------------------------------------------------------------------------------------------------------ACA-------TCT--AG------------------------------------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/18/2015 at 12:02 AM