ID:

dan-mir-9a

 Coordinate:

scaffold_13337:17332439-17332516 -

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

5pUTR

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-32.8 -32.3 -32.3

Flybase annnotation

pre_miRNA [Dana\mir-9a-RM]; utr5 [utr5_plus_8673]; miRNA [Dana\miR-9a-RA]

No Repeatable elements found

Sense Strand Reads

TCCCTTTTTTTCAAACAATACTCCCACAAATCTTATATAACACTATGGGTGCTATGTTGTCTTTGGTTATCTAGCTGTATGAGTGATAAATAACGTCATAAAGCTAGCTTACCGAAGTTAATATTAGCGTCTGTCCAGCGAAACAGTCCAAAAAAGGAAACCCACATTGCGTATACTC

********************************************(((((((((((((((.(((((((...((((((.(((((((........)).))))).))))))...))))))).))))).))))))))))******************************************** 		Read size # Mismatch Hit Count Total Norm Total M044

female body

 V105

male body		 V106

head

 V055

head

 M058

embryo

 V039

embryo
...........................................................TCTTTGGTTATCTAGCTGTATG................................................................................................. 22 0 1 82455.00 82455 14239 24797 27215 7293 5765 3146
...........................................................TCTTTGGTTATCTAGCTGTATGA................................................................................................ 23 0 1 47153.00 47153 15713 9298 6339 4936 9240 1627
...........................................................TCTTTGGTTATCTAGCTGTAT.................................................................................................. 21 0 1 25620.00 25620 12411 5667 1594 4660 1188 100
..................................................................................................TAAAGCTAGCTTACCGAAGTT........................................................... 21 0 1 2997.00 2997 495 439 1397 356 269 41
..................................................................................................TAAAGCTAGCTTACCGAAGTTA.......................................................... 22 0 1 2546.00 2546 839 290 614 389 258 156
.................................................................................................ATAAAGCTAGCTTACCGAAGTT........................................................... 22 0 1 2188.00 2188 526 435 830 100 257 40
...........................................................TCTTTGGTTATCTAGCTGTA................................................................................................... 20 0 1 1979.00 1979 742 446 108 232 446 5
.................................................................................................ATAAAGCTAGCTTACCGAAGTTA.......................................................... 23 0 1 1907.00 1907 1174 166 294 117 99 57
...........................................................TCTTTGGTTATCTAGCTGTATT................................................................................................. 22 1 1 1759.00 1759 270 274 234 306 5 670
...........................................................TCTTTGGTTATCTAGCTGTATGT................................................................................................ 23 1 1 1475.00 1475 577 413 163 201 103 18
............................................................CTTTGGTTATCTAGCTGTATGA................................................................................................ 22 0 1 1246.00 1246 1218 5 4 1 15 3
............................................................CTTTGGTTATCTAGCTGTATG................................................................................................. 21 0 1 1081.00 1081 1041 14 11 2 12 1
............................................................CTTTGGTTATCTAGCTGTAT.................................................................................................. 20 0 1 940.00 940 932 5 0 3 0 0
...........................................................TCTTTGGTTATCTATCTGTATG................................................................................................. 22 1 1 800.00 800 14 242 394 57 2 91
...........................................................TCTTTGGTGATCTAGCTGTATGA................................................................................................ 23 1 1 636.00 636 629 1 0 6 0 0
...........................................................TCTTTGGTTATCTAGCTGT.................................................................................................... 19 0 1 611.00 611 256 177 25 122 22 9
...........................................................TCTTTGGTTATCTAGCTGTATGAA............................................................................................... 24 1 1 602.00 602 192 106 119 97 78 10
...........................................................TCTTTGGTGATCTAGCTGTAT.................................................................................................. 21 1 1 551.00 551 541 1 0 9 0 0
...........................................................TCTTTGGTGATCTAGCTGTATG................................................................................................. 22 1 1 547.00 547 530 10 0 4 2 1
...........................................................TCTTTGGTTATCTAGCTGTATTA................................................................................................ 23 1 1 516.00 516 21 29 27 122 3 314
...........................................................TCTTTGGTTATCTAGCTGTATGAT............................................................................................... 24 1 1 493.00 493 221 80 93 77 19 3
...........................................................TCTTTGGTTATCTAGATGTATG................................................................................................. 22 1 1 472.00 472 0 229 202 32 1 8
...........................................................TGTTTGGTTATCTAGCTGTATGA................................................................................................ 23 1 1 430.00 430 2 13 0 1 414 0
..................................................................................................TAAAGCTAGCTTACCGAAGTTAA......................................................... 23 0 1 400.00 400 49 41 253 17 9 31
...........................................................TATTTGGTTATCTAGCTGTATG................................................................................................. 22 1 1 385.00 385 1 131 217 33 0 3
...........................................................TGTTTGGTTATCTAGCTGTATG................................................................................................. 22 1 1 340.00 340 0 41 5 8 283 3
...........................................................TCCTTGGTTATCTAGCTGTATGA................................................................................................ 23 1 1 320.00 320 16 10 9 6 278 1
...........................................................TCTTTGGTTATCTAGCTGTATGAC............................................................................................... 24 1 1 311.00 311 60 9 216 15 7 4
...........................................................TCTTTGGTTATCTAGCTGTAAG................................................................................................. 22 1 1 297.00 297 0 174 119 1 0 3
...........................................................TCTTTGGTTATCTAGCTGTACG................................................................................................. 22 1 1 288.00 288 7 161 106 8 3 3
...........................................................TCTTTGGTTATCTAGCTGTAC.................................................................................................. 21 1 1 272.00 272 12 24 4 14 218 0
...........................................................TCTTTGGTTATCTATCTGTATGA................................................................................................ 23 1 1 267.00 267 12 89 86 32 4 44
...........................................................TCTTTGGTTATCTAGCTTTATG................................................................................................. 22 1 1 261.00 261 3 21 31 70 4 132
...........................................................TCTTTGGTAATCTAGCTGTATGA................................................................................................ 23 1 1 256.00 256 249 5 1 1 0 0
...........................................................TCTTTGGTTATCTAGCTGTAA.................................................................................................. 21 1 1 254.00 254 86 53 80 35 0 0
...........................................................TCTTTGGTAATCTAGCTGTATG................................................................................................. 22 1 1 249.00 249 234 15 0 0 0 0
...........................................................TCTTTGGTTATATAGCTGTATG................................................................................................. 22 1 1 240.00 240 0 150 66 14 9 1
...........................................................TCTTTGGTAATCTAGCTGTAT.................................................................................................. 21 1 1 215.00 215 210 2 0 3 0 0
...........................................................TCCTTGGTTATCTAGCTGTATG................................................................................................. 22 1 1 214.00 214 11 21 46 8 124 4
...........................................................TCTTTGGTTATCTAGCTGTATGC................................................................................................ 23 1 1 205.00 205 24 24 64 60 29 4
...........................................................TCTTTGGTTATCTAGCTGTATA................................................................................................. 22 1 1 164.00 164 52 29 41 30 11 1
...........................................................TCGTTGGTTATCTAGCTGTATG................................................................................................. 22 1 1 161.00 161 0 2 134 22 1 2
...........................................................TCTTTTGTTATCTAGCTGTATG................................................................................................. 22 1 1 158.00 158 5 34 78 7 25 9
...........................................................TCTTTGGTTATCTATCTGTAT.................................................................................................. 21 1 1 157.00 157 13 53 32 58 1 0
...........................................................TCTTTGGTCATCTAGCTGTATG................................................................................................. 22 1 1 157.00 157 99 20 26 6 3 3
.................................................................................................ATAAAGCTAGCTTACCGAAGTTAA......................................................... 24 0 1 151.00 151 11 19 101 3 3 14
...........................................................TCTTTGGTTATCTAGATGTATGA................................................................................................ 23 1 1 150.00 150 3 70 46 28 0 3
.................................................................................................ATAAAGCTAGCTTACCGAAG............................................................. 20 0 1 139.00 139 14 7 108 7 0 3
..................................................................................................TAAAGCTAGCTTACCGAAGT............................................................ 20 0 1 138.00 138 19 33 55 8 22 1
...........................................................TCTTTGGTCATCTAGCTGTATGA................................................................................................ 23 1 1 135.00 135 117 6 3 1 6 2
.............................................................TTTGGTTATCTAGCTGTATG................................................................................................. 20 0 1 132.00 132 51 18 31 8 14 10
...........................................................TATTTGGTTATCTAGCTGTATGA................................................................................................ 23 1 1 131.00 131 0 47 49 33 0 2
...........................................................TCTTTGGTTATCTAGCTTTATT................................................................................................. 22 2 1 129.00 129 0 0 0 9 0 120
...........................................................TCTTTGGTTATCTAGCTGTAGG................................................................................................. 22 1 1 128.00 128 1 91 23 7 5 1
.................................................................................................ATAAAGCTAGCTTACCGAAGT............................................................ 21 0 1 125.00 125 25 34 31 17 17 1
...........................................................TCTCTGGTTATCTAGCTGTATG................................................................................................. 22 1 1 125.00 125 0 28 24 7 62 4
...........................................................TCTTTGGTTATCTAGCTGTCTG................................................................................................. 22 1 1 125.00 125 1 23 7 68 0 26
...........................................................TCTTTGGTTATCTAGCTGTT................................................................................................... 20 1 1 124.00 124 48 54 6 16 0 0
...........................................................TCTTTGGTTATCCAGCTGTATG................................................................................................. 22 1 1 118.00 118 6 67 24 14 3 4
...........................................................TCTTTGGGTATCTAGCTGTATG................................................................................................. 22 1 1 118.00 118 2 5 1 90 2 18
...........................................................TCTCTGGTTATCTAGCTGTATGA................................................................................................ 23 1 1 118.00 118 1 19 6 3 86 3
...........................................................TCTGTGGTTATCTAGCTGTATGA................................................................................................ 23 1 1 116.00 116 0 2 1 6 106 1
.............................................................TTTGGTTATCTAGCTGTATGA................................................................................................ 21 0 1 116.00 116 85 5 6 6 10 4
...........................................................TCTTTGGTTATCTAGCTTTATGA................................................................................................ 23 1 1 116.00 116 0 6 9 36 11 54
...........................................................TCTTTGGTCATCTAGCTGTAT.................................................................................................. 21 1 1 114.00 114 107 1 1 4 1 0
...........................................................TTTTTGGTTATCTAGCTGTATG................................................................................................. 22 1 1 113.00 113 3 34 16 2 57 1
...........................................................TCTTTGGTTATCTAGCTGTACGA................................................................................................ 23 1 1 111.00 111 7 71 29 2 1 1
...........................................................TCTTTGGTTATATAGCTGTATGA................................................................................................ 23 1 1 107.00 107 3 53 20 12 17 2
...........................................................TCTTTGGTTATCTATCTGTATT................................................................................................. 22 2 1 106.00 106 1 19 28 9 0 49
...........................................................TCTTTGGTTATCTAGCTGTATC................................................................................................. 22 1 1 106.00 106 17 15 13 40 11 10
...........................................................TCTGTGGTTATCTAGCTGTATG................................................................................................. 22 1 1 105.00 105 0 5 1 23 75 1
...........................................................TCTTTGGCTATCTAGCTGTATG................................................................................................. 22 1 1 104.00 104 4 20 24 39 9 8
...........................................................TCTTTGTTTATCTAGCTGTATG................................................................................................. 22 1 1 103.00 103 9 22 32 7 22 11
...........................................................TTTTTGGTTATCTAGCTGTATGA................................................................................................ 23 1 1 102.00 102 4 10 1 4 82 1
...........................................................TATTTGGTTATCTAGCTGTAT.................................................................................................. 21 1 1 95.00 95 3 48 13 31 0 0
...........................................................TCTTTGGTTATCTAGCTATG................................................................................................... 20 2 1 93.00 93 14 32 41 1 5 0
...........................................................TCTTTGGTTATCTAGCTGCATG................................................................................................. 22 1 1 93.00 93 8 18 29 23 4 11
...........................................................TCTTTGGTTATCTAGCTGTAAGA................................................................................................ 23 1 1 92.00 92 0 58 34 0 0 0
...........................................................GCTTTGGTTATCTAGCTGTATG................................................................................................. 22 1 1 91.00 91 42 12 5 17 11 4
...........................................................TCTTTGGTTATCTAGCTGTATGAAA.............................................................................................. 25 2 1 89.00 89 26 7 39 6 6 5
...........................................................TCTTTGGTTACCTAGCTGTATG................................................................................................. 22 1 1 86.00 86 1 34 26 17 5 3
...........................................................GCTTTGGTTATCTAGCTGTATGA................................................................................................ 23 1 1 85.00 85 47 2 0 6 29 1
...........................................................TCTTTGGTTATCTAGCTGTATGTT............................................................................................... 24 2 1 85.00 85 21 19 31 13 1 0
..................................................................................................TAAAGCTAGCTTACCGAAG............................................................. 19 0 1 85.00 85 6 5 62 7 2 3
...........................................................CCTTTGGTTATCTAGCTGTATG................................................................................................. 22 1 1 83.00 83 6 18 22 12 19 6
...........................................................TCTTTGGTTATCTAGCTGTATTT................................................................................................ 23 2 1 80.00 80 45 8 8 18 0 1
...........................................................TCTTTGGTTATCTAGCTGTTTG................................................................................................. 22 1 1 80.00 80 2 4 0 55 8 11
...........................................................TCTTTGGTTATCTAGCTGTATGG................................................................................................ 23 1 1 77.00 77 27 10 14 6 16 4
...........................................................TCTTTGGTTATCAAGCTGTATG................................................................................................. 22 1 1 75.00 75 0 71 1 1 2 0
...........................................................TCTTTGGTTATCTAGCTGTGTG................................................................................................. 22 1 1 75.00 75 8 11 19 29 3 5
...................................................................................................AAAGCTAGCTTACCGAAGTTA.......................................................... 21 0 1 74.00 74 67 0 2 3 2 0
...........................................................TCTTTTGTTATCTAGCTGTATGA................................................................................................ 23 1 1 74.00 74 3 11 11 4 40 5
...........................................................TCTTTGGGTATCTAGCTGTATGA................................................................................................ 23 1 1 74.00 74 2 4 0 57 7 4
...........................................................TCTATGGTTATCTAGCTGTATGA................................................................................................ 23 1 1 73.00 73 0 7 1 2 62 1
...........................................................TCTTCGGTTATCTAGCTGTATG................................................................................................. 22 1 1 73.00 73 3 21 31 8 6 4
...........................................................TCTTTGGTTAGCTAGCTGTATG................................................................................................. 22 1 1 73.00 73 1 54 2 15 0 1
...........................................................TCTTTGGTTATCTAGCTCTATG................................................................................................. 22 1 1 73.00 73 0 22 14 16 2 19
...........................................................TCTTTGGTTATCTAGCCGTATG................................................................................................. 22 1 1 73.00 73 7 20 25 14 3 4
...........................................................TCTTTGGTTATCTAGCTGTAG.................................................................................................. 21 1 1 72.00 72 7 49 7 7 2 0
...........................................................TCTTTGGCTATCTAGCTGTATGA................................................................................................ 23 1 1 70.00 70 11 8 10 17 20 4
...........................................................TCTTTGGTTATCTAGCTATATG................................................................................................. 22 1 1 70.00 70 4 36 18 7 3 2
.............................................................TTTGGTTATCTAGCTGTAT.................................................................................................. 19 0 1 69.00 69 55 7 2 4 0 1
...........................................................TCTATGGTTATCTAGCTGTATG................................................................................................. 22 1 1 69.00 69 0 31 2 1 34 1
...........................................................TCTTTGGTTATGTAGCTGTATG................................................................................................. 22 1 1 69.00 69 2 59 4 3 0 1
...........................................................TCTTTGGTTATTTAGCTGTATG................................................................................................. 22 1 1 68.00 68 3 50 6 1 4 4
...........................................................TCTTTGGTTATCTAGATGTAT.................................................................................................. 21 1 1 67.00 67 0 29 15 23 0 0
...........................................................TCTTTGTTTATCTAGCTGTATGA................................................................................................ 23 1 1 64.00 64 7 7 7 2 32 9
...........................................................TCTTTGGTTATCTCGCTGTATG................................................................................................. 22 1 1 64.00 64 0 32 6 21 0 5
...........................................................TCTTTGGTTATCTGGCTGTATG................................................................................................. 22 1 1 64.00 64 6 21 24 8 2 3
...........................................................TGTTTGGTTATCTAGCTGTAT.................................................................................................. 21 1 1 63.00 63 0 11 0 1 50 1
...........................................................TCTTTGGTTGTCTAGCTGTATG................................................................................................. 22 1 1 63.00 63 0 16 28 15 1 3
...........................................................CCTTTGGTTATCTAGCTGTATGA................................................................................................ 23 1 1 61.00 61 11 9 6 2 30 3
...........................................................TCTTTGGTTATCTAGTTGTATG................................................................................................. 22 1 1 60.00 60 0 33 14 6 3 4
...........................................................TCTTTGGTTATCGAGCTGTATG................................................................................................. 22 1 1 60.00 60 0 50 0 5 0 5
...........................................................GCTTTGGTTATCTAGCTGTAT.................................................................................................. 21 1 1 60.00 60 44 2 0 12 2 0
.................................................................................................ATAAAGCTGGCTTACCGAAGTTA.......................................................... 23 1 1 59.00 59 56 0 2 1 0 0
...........................................................TCTTTGGTTATCTAGCTTTAT.................................................................................................. 21 1 1 58.00 58 4 5 1 38 0 10
...................................................................................................AAAGCTAGCTTACCGAAGTT........................................................... 20 0 1 57.00 57 32 1 17 2 5 0
...........................................................TCTTTGGTTATCTAGCTGTAGGA................................................................................................ 23 1 1 57.00 57 2 41 3 3 8 0
...........................................................TCGTTGGTTATCTAGCTGTATGA................................................................................................ 23 1 1 57.00 57 0 2 29 22 1 3
...........................................................TCTTTGGGTATCTAGCTGTAT.................................................................................................. 21 1 1 54.00 54 4 0 0 48 2 0
...........................................................TCCTTGGTTATCTAGCTGTAT.................................................................................................. 21 1 1 53.00 53 11 4 1 4 33 0
...........................................................TCTTTGGTTATCTACCTGTATG................................................................................................. 22 1 1 53.00 53 2 14 15 13 3 6
...........................................................TCTTTGGTTATCTAGCTGCATGA................................................................................................ 23 1 1 52.00 52 3 9 2 30 4 4
...........................................................ACTTTGGTTATCTAGCTGTATG................................................................................................. 22 1 1 51.00 51 11 17 3 8 12 0
...........................................................TCTTTGGTTATCTAGCTGTTT.................................................................................................. 21 1 1 51.00 51 14 7 1 24 4 1
............................................................CTTTGGTTGTCTAGCTGTATGA................................................................................................ 22 1 1 50.00 50 50 0 0 0 0 0
...........................................................TCTTTGGTTATCTAGCTGTATAA................................................................................................ 23 1 1 50.00 50 15 4 12 7 9 3
...........................................................TCTTTGGTTATCCAGCTGTATGA................................................................................................ 23 1 1 49.00 49 3 27 7 5 6 1
...........................................................TCTTTGGTTATATAGCTGTAT.................................................................................................. 21 1 1 48.00 48 0 32 3 10 3 0
..................................................................................................TAAAGCTAGCTTACCGAAGTTAT......................................................... 23 1 1 48.00 48 4 7 25 8 1 3
............................................................CTTTGGTTATCTAGCTGTA................................................................................................... 19 0 1 48.00 48 48 0 0 0 0 0
.................................................................................................AGAAAGCTAGCTTACCGAAGTT........................................................... 22 1 1 47.00 47 0 3 0 1 43 0
...........................................................TCTTTGGTTATCTAGTTGTATGA................................................................................................ 23 1 1 46.00 46 2 10 6 9 18 1
............................................................CTTTGGTTATCTAGCTGTATGT................................................................................................ 22 1 1 45.00 45 44 1 0 0 0 0
...........................................................TCTTTGGCTATCTAGCTGTAT.................................................................................................. 21 1 1 44.00 44 9 10 3 20 2 0
...........................................................TCTTTGATTATCTAGCTGTATG................................................................................................. 22 1 1 44.00 44 0 25 13 5 0 1
...........................................................TCTTTAGTTATCTAGCTGTATG................................................................................................. 22 1 1 43.00 43 4 10 18 6 0 5
...........................................................TCTTTGGTTACCTAGCTGTATGA................................................................................................ 23 1 1 42.00 42 7 13 14 5 3 0
..............................................................TTGGTTATCTAGCTGTATG................................................................................................. 19 0 1 42.00 42 19 11 6 0 5 1
............................................................CTTTGGTTGTCTAGCTGTATG................................................................................................. 21 1 1 42.00 42 42 0 0 0 0 0
...........................................................TCTTTGGTTATCTAGCTGGATG................................................................................................. 22 1 1 40.00 40 1 2 4 23 1 9
...........................................................TCGTTGGTTATCTAGCTGTAT.................................................................................................. 21 1 1 39.00 39 3 1 11 24 0 0
...........................................................TCTTTGGTTAGCTAGCTGTATGA................................................................................................ 23 1 1 39.00 39 0 23 0 15 0 1
...........................................................TCTTTGGTTATCTAGCTGTGTGA................................................................................................ 23 1 1 39.00 39 9 8 9 11 2 0
...........................................................ACTTTGGTTATCTAGCTGTATGA................................................................................................ 23 1 1 39.00 39 9 4 1 8 16 1
...........................................................TCTTTGGTTATCTAGCTTTATTA................................................................................................ 23 2 1 38.00 38 0 0 0 6 0 32
............................................................TCTTGGTTATCTAGCTGTATG................................................................................................. 21 2 1 38.00 38 3 17 18 0 0 0
...........................................................TCTTTGGTGATCTAGCTGTATGT................................................................................................ 23 2 1 38.00 38 37 0 0 1 0 0
...........................................................TCTTTGGTTATCTCGCTGTATGA................................................................................................ 23 1 1 38.00 38 1 21 1 14 0 1
...........................................................TCTTTGGTTATCTAGCTGTATCA................................................................................................ 23 1 1 37.00 37 7 4 1 18 4 3
...........................................................TCTGTGGTTATCTAGCTGTAT.................................................................................................. 21 1 1 37.00 37 0 4 0 15 18 0
...........................................................TCTTTGCTTATCTAGCTGTATG................................................................................................. 22 1 1 36.00 36 3 16 7 3 0 7
...........................................................TCTTTGGTTATCTAGCTGTCTGA................................................................................................ 23 1 1 36.00 36 0 1 0 25 0 10
...........................................................TCTTTGGTTATCTAGCTGTTTGA................................................................................................ 23 1 1 35.00 35 1 0 0 13 17 4
...........................................................TCTTTGGTTATCAAGCTGTATGA................................................................................................ 23 1 1 35.00 35 0 32 1 0 2 0
...........................................................TCTTTGGTTATCCAGCTGTAT.................................................................................................. 21 1 1 34.00 34 4 23 2 4 1 0
...........................................................TCTTTGGTTATCTAGCTGTCT.................................................................................................. 21 1 1 34.00 34 0 2 2 30 0 0
...........................................................TCTTTGGTTATCTAGCCGTATGA................................................................................................ 23 1 1 34.00 34 7 5 10 6 5 1
...........................................................TCTTTGGTTATCTCGCTGTAT.................................................................................................. 21 1 1 33.00 33 0 8 3 22 0 0
.................................................................................................ATAAAGCTAGCTTACCGAAGTTT.......................................................... 23 1 1 33.00 33 11 12 6 3 1 0
...........................................................TCTTTGGTTATGTAGCTGTATGA................................................................................................ 23 1 1 33.00 33 0 27 2 2 2 0
............................................................CTTTGGTTGTCTAGCTGTAT.................................................................................................. 20 1 1 33.00 33 33 0 0 0 0 0
...........................................................TCTTCGGTTATCTAGCTGTATGA................................................................................................ 23 1 1 32.00 32 8 10 3 5 6 0
...........................................................TCTTTGGTTATCTTGCTGTATG................................................................................................. 22 1 1 32.00 32 0 14 2 9 1 6
..............................................................TTGGTTATCTAGCTGTATGA................................................................................................ 20 0 1 32.00 32 13 4 3 3 8 1
...........................................................TCTTTGGTTATCTAGCTGTATGAG............................................................................................... 24 0 1 32.00 32 10 7 11 4 0 0
...........................................................TCTTTGGTTAACTAGCTGTATG................................................................................................. 22 1 1 32.00 32 1 24 2 2 3 0
...........................................................TCTTTGGTTATCTAACTGTATG................................................................................................. 22 1 1 31.00 31 2 8 8 6 2 5
...........................................................TCTTTGGATATCTAGCTGTATG................................................................................................. 22 1 1 31.00 31 3 6 1 13 3 5
...........................................................TCTTTCGTTATCTAGCTGTATG................................................................................................. 22 1 1 31.00 31 6 7 11 5 1 1
..........................................................CTCTTTGGTTATCTAGCTGTATGA................................................................................................ 24 1 1 31.00 31 10 0 0 4 12 5
...........................................................TCTTTGGTTATCTACCTGTATGA................................................................................................ 23 1 1 30.00 30 3 10 1 8 3 5
...........................................................TCTTTGGTTCTCTAGCTGTATG................................................................................................. 22 1 1 29.00 29 0 7 2 14 0 6
.................................................................................................ATAAAGCTGGCTTACCGAAGTT........................................................... 22 1 1 28.00 28 26 1 1 0 0 0
...........................................................TCTTTGGTTATCTAGCTGCAT.................................................................................................. 21 1 1 28.00 28 6 4 2 15 1 0
...........................................................TCTTTGGTTATCTGGCTGTATGA................................................................................................ 23 1 1 28.00 28 2 4 4 11 5 2
.................................................................................................ATAAAGCTAGCTTACCGAAGTTAT......................................................... 24 1 1 28.00 28 5 4 19 0 0 0
...........................................................TCTTTGGTTATCTAGCTGTATGATT.............................................................................................. 25 1 1 28.00 28 12 6 2 8 0 0
...........................................................TCTTTGTTTATCTAGCTGTAT.................................................................................................. 21 1 1 27.00 27 11 5 1 7 3 0
...........................................................TCTTTGGTTATCTAGCTCTATGA................................................................................................ 23 1 1 27.00 27 3 4 3 8 1 8
..................................................................................................TAAAGCTAGCTTACCGAAGTC........................................................... 21 1 1 27.00 27 0 5 5 1 16 0
...........................................................CCTTTGGTTATCTAGCTGTAT.................................................................................................. 21 1 1 27.00 27 16 4 0 6 1 0
...........................................................TATTTGGTTATCTAGATGTATG................................................................................................. 22 2 1 27.00 27 0 12 12 3 0 0
...........................................................TCTTTTGTTATCTAGCTGTAT.................................................................................................. 21 1 1 27.00 27 7 7 7 3 3 0
...........................................................TCTATGGTTATCTAGCTGTAT.................................................................................................. 21 1 1 26.00 26 1 12 0 3 10 0
..................................................................................................TAAAGCTAGCTTACCGAAGTTT.......................................................... 22 1 1 26.00 26 5 9 11 1 0 0
...........................................................TCTTTGGTTATCTGGCTGTAT.................................................................................................. 21 1 1 26.00 26 6 8 0 11 0 1
...........................................................TCTTTGGTTATCTATCTTTATG................................................................................................. 22 2 1 26.00 26 0 0 0 8 0 18
...........................................................TTTTTGGTTATCTAGCTGTAT.................................................................................................. 21 1 1 26.00 26 2 4 1 3 16 0
...........................................................TCTTTGGTGATTTAGCTGTATG................................................................................................. 22 2 1 25.00 25 2 6 10 0 5 2
...........................................................TCTTTGGTTATTTAGCTGTATGA................................................................................................ 23 1 1 25.00 25 2 15 1 3 3 1
...........................................................TCTTTGGTTATCTAGTTGTAT.................................................................................................. 21 1 1 25.00 25 2 10 1 9 3 0
..........................................................CTCTTTGGTTATCTAGCTGTATG................................................................................................. 23 1 1 25.00 25 7 1 1 8 3 5
...........................................................TCTTTGGTTAACTAGCTGTATGA................................................................................................ 23 1 1 25.00 25 2 18 1 1 3 0
...........................................................TCTTTGGTTATCTAGCTGGATGA................................................................................................ 23 1 1 25.00 25 1 0 1 13 5 5
...........................................................TCTTTGGTTATCTAGCTGTTTT................................................................................................. 22 2 1 24.00 24 1 1 0 18 0 4
...........................................................TCTTTGGTTATCTAGCTATATGA................................................................................................ 23 1 1 24.00 24 1 7 3 5 6 2
...........................................................TCTTTGGTTATCTATCTGTATTA................................................................................................ 23 2 1 24.00 24 0 0 2 4 0 18
...........................................................TCTCTGGTTATCTAGCTGTAT.................................................................................................. 21 1 1 24.00 24 2 8 0 5 9 0
...........................................................TCTTTAGTTATCTAGCTGTATGA................................................................................................ 23 1 1 24.00 24 2 6 3 5 6 2
...........................................................ACTTTGGTTATCTAGCTGTAT.................................................................................................. 21 1 1 24.00 24 11 0 0 13 0 0
...........................................................TCTTTGGTTGTCTAGCTGTATGA................................................................................................ 23 1 1 23.00 23 3 3 8 4 2 3
...........................................................TCTTTGGTTATCTAGGTGTATG................................................................................................. 22 1 1 23.00 23 0 14 5 2 0 2
...........................................................TCTTTGGTGATCTAGCTGTATT................................................................................................. 22 2 1 23.00 23 22 0 0 1 0 0
...........................................................TGTTTGGTTATCTAGCTGTA................................................................................................... 20 1 1 23.00 23 0 1 0 0 22 0
...........................................................TCTTTGGTGATCTAGCTGTA................................................................................................... 20 1 1 23.00 23 22 0 0 1 0 0
.................................................................................................AGAAAGCTAGCTTACCGAAGTTA.......................................................... 23 1 1 23.00 23 0 1 0 1 21 0
...........................................................TCTTTGGTTATCGAGCTGTATGA................................................................................................ 23 1 1 22.00 22 1 18 0 3 0 0
............................................................CTTTGGTTATCTAGCTGTATGAT............................................................................................... 23 1 1 22.00 22 21 0 0 0 1 0
..................................................................................................TAAAGCTATCTTACCGAAGTT........................................................... 21 1 1 22.00 22 1 6 14 1 0 0
.................................................................................................ATAAAGCTAGCTTACCGAAGTC........................................................... 22 1 1 21.00 21 0 2 1 1 17 0
............................................................TCTTTGTTATCTAGCTGTATGA................................................................................................ 22 3 1 21.00 21 12 4 4 0 1 0
...........................................................TCTTTGGTTAGCTAGCTGTAT.................................................................................................. 21 1 1 21.00 21 0 3 0 17 0 1
.................................................................................................ATAAAGCTAGCTTACCGAA.............................................................. 19 0 1 21.00 21 5 5 3 3 4 1
...........................................................TCCTTGGTTATCTAGCTGTA................................................................................................... 20 1 1 21.00 21 1 0 0 1 19 0
...........................................................TCTTTGGATATCTAGCTGTATGA................................................................................................ 23 1 1 20.00 20 1 2 0 8 8 1
...........................................................TCTTTGGTTATCTAGCTGTCTT................................................................................................. 22 2 1 20.00 20 0 0 0 7 0 13
..................................................................................................TAAAGCTATCTTACCGAAGTTA.......................................................... 22 1 1 20.00 20 8 2 10 0 0 0
...........................................................TCTTTGGTTATCTAACTGTATGA................................................................................................ 23 1 1 20.00 20 4 1 3 6 3 3
...........................................................TCTTTGGTTATCTACCTGTAT.................................................................................................. 21 1 1 19.00 19 4 1 1 10 2 1
............................................................CTTTGGTTATCTAGCTGTATGAA............................................................................................... 23 1 1 19.00 19 19 0 0 0 0 0
..........................................................GTCTTTGGTTATCTAGCTGTATGA................................................................................................ 24 0 1 19.00 19 19 0 0 0 0 0
..................................................................................................TAAAGATAGCTTACCGAAGTT........................................................... 21 1 1 19.00 19 0 6 11 2 0 0
...........................................................TCTTTGGTTATCTATCTTTATGA................................................................................................ 23 2 1 19.00 19 0 0 1 0 0 18
............................................................CTTTGGTTATCTAGCTGTATT................................................................................................. 21 1 1 19.00 19 19 0 0 0 0 0
...........................................................TCTTTGGTTACCTAGCTGTAT.................................................................................................. 21 1 1 19.00 19 7 5 3 3 1 0
...........................................................TCTTTGGTTATCGAGCTGTAT.................................................................................................. 21 1 1 19.00 19 1 14 0 4 0 0
...........................................................TCTTTCGTTATCTAGCTGTATGA................................................................................................ 23 1 1 18.00 18 7 2 2 3 4 0
...........................................................TCTTTGGTTATCTATCTGTATGT................................................................................................ 23 2 1 18.00 18 0 5 8 3 0 2
...........................................................TCTTTGGTTATCTAGCTGTATTC................................................................................................ 23 2 1 18.00 18 1 0 2 13 0 2
.................................................................................................ATAAAGCTATCTTACCGAAGTT........................................................... 22 1 1 18.00 18 0 5 13 0 0 0
...........................................................TCTTTGGTTATCTAGCGGTATG................................................................................................. 22 1 1 18.00 18 1 2 1 9 2 3
...........................................................TCTTTGATTATCTAGCTGTATGA................................................................................................ 23 1 1 18.00 18 1 11 2 3 1 0
..................................................................................................TAATGCTAGCTTACCGAAGTT........................................................... 21 1 1 17.00 17 0 0 0 1 16 0
...........................................................TCTTTGGTTAACTAGCTGTAT.................................................................................................. 21 1 1 17.00 17 2 12 0 3 0 0
...........................................................TCTTTGGTTATCTTGCTGTATGA................................................................................................ 23 1 1 17.00 17 0 5 1 11 0 0
...........................................................TCTTTGGTTATCTAGCTCTATT................................................................................................. 22 2 1 17.00 17 0 1 0 3 0 13
...........................................................TCTTTGGTTATCTAGCTGTGT.................................................................................................. 21 1 1 17.00 17 3 3 0 11 0 0
..................................................................................................TAAAGCTAGATTACCGAAGTT........................................................... 21 1 1 16.00 16 0 0 13 2 0 1
...........................................................TCTTGGGTTATCTAGCTGTATG................................................................................................. 22 1 1 16.00 16 1 0 2 10 0 3
...........................................................TCTTTGGGTATCTAGCTGTATT................................................................................................. 22 2 1 16.00 16 0 0 0 13 0 3
...........................................................TCTTTGGTTTTCTAGCTGTATGA................................................................................................ 23 1 1 16.00 16 1 0 0 2 11 2
...........................................................TCTTTGGTTATCAAGCTGTAT.................................................................................................. 21 1 1 16.00 16 0 15 1 0 0 0
............................................................TCTTGGTTATCTAGCTGTATGA................................................................................................ 22 2 1 16.00 16 0 7 6 1 2 0
...........................................................TCTTTGGTTATCTAGCTAT.................................................................................................... 19 1 1 16.00 16 9 5 2 0 0 0
...........................................................TCTTTGGTTGTCTAGCTGTAT.................................................................................................. 21 1 1 16.00 16 3 1 0 12 0 0
..................................................................................................TGAAGCTAGCTTACCGAAGTT........................................................... 21 1 1 15.00 15 0 1 0 0 14 0
...........................................................TCTTTGGTTATCTAGCCGTAT.................................................................................................. 21 1 1 15.00 15 7 4 0 4 0 0
...........................................................TCTTTGGTTCTCTAGCTGTATGA................................................................................................ 23 1 1 15.00 15 0 1 0 10 0 4
...........................................................TCTTTGGTTTTCTAGCTGTATG................................................................................................. 22 1 1 15.00 15 0 2 3 1 7 2
..............................................................TTGGTTATCTAGCTGTAT.................................................................................................. 18 0 1 15.00 15 14 1 0 0 0 0
...........................................................TCTTTGGTTATCTAGCTATGA.................................................................................................. 21 3 3 14.67 44 13 14 9 1 7 0
...........................................................TCTTTGGTGATCTAGCTGTATCA................................................................................................ 23 2 1 14.00 14 14 0 0 0 0 0
...........................................................TCTTTGGTTATCTAGCTCTAT.................................................................................................. 21 1 1 14.00 14 2 3 0 9 0 0
...........................................................TCTTTGGTTATCTAACTGTAT.................................................................................................. 21 1 1 14.00 14 3 2 0 8 1 0
..........................................................CTCTTTGGTTATCTAGCTGTAT.................................................................................................. 22 1 1 14.00 14 6 1 0 5 2 0
..........................................................TTCTTTGGTTATCTAGCTGTATG................................................................................................. 23 1 1 14.00 14 14 0 0 0 0 0
..................................................................................................TAAAGCTAGCTTACCGAAGTA........................................................... 21 1 1 14.00 14 0 3 10 0 1 0
...............................................................TGGTTATCTAGCTGTATG................................................................................................. 18 0 1 14.00 14 4 4 4 0 2 0
...........................................................TCTTTGGTTATCTAGCTG..................................................................................................... 18 0 1 14.00 14 4 1 1 7 1 0
..................................................................................................TAAATCTAGCTTACCGAAGTT........................................................... 21 1 1 14.00 14 0 2 11 1 0 0
...........................................................TCTTTGGATATCTAGCTGTAT.................................................................................................. 21 1 1 13.00 13 1 0 0 12 0 0
...........................................................TCTTTGGCTATCTAGCTGTATT................................................................................................. 22 2 1 13.00 13 0 0 0 6 0 7
...........................................................TCTTTGCTTATCTAGCTGTATGA................................................................................................ 23 1 1 13.00 13 3 1 1 4 0 4
...........................................................TCTTTGGTAATCTAGCTGTATGT................................................................................................ 23 2 1 13.00 13 13 0 0 0 0 0
...........................................................TCTTTGGTTATGTAGCTGTAT.................................................................................................. 21 1 1 13.00 13 0 11 0 0 1 1
...........................................................TCTTTGGTTATCTTGCTGTAT.................................................................................................. 21 1 1 13.00 13 1 1 0 10 1 0
...........................................................TCTTTGGTTATTTAGCTGTAT.................................................................................................. 21 1 1 13.00 13 0 8 0 5 0 0
...........................................................TCTTTGGTGATCTAGCTGTATTA................................................................................................ 23 2 1 12.00 12 12 0 0 0 0 0
...........................................................TCTTTGGTTATCTAGCTATAT.................................................................................................. 21 1 1 12.00 12 1 7 1 2 1 0
...........................................................TCTTTGGTGATCTAGCTGTATC................................................................................................. 22 2 1 12.00 12 12 0 0 0 0 0
.................................................................................................ATAAAGCTCGCTTACCGAAGTTA.......................................................... 23 1 1 12.00 12 10 1 1 0 0 0
...........................................................TCTTTGGTTATCTAGCTGTATGTA............................................................................................... 24 2 1 12.00 12 3 3 5 1 0 0
...........................................................TCTTTAGTTATCTAGCTGTAT.................................................................................................. 21 1 1 12.00 12 1 2 3 5 1 0
...........................................................TCTTTGGTTATCTAGCTGTATGAAT.............................................................................................. 25 1 1 12.00 12 4 0 3 4 1 0
...........................................................TCTTTTGTTATCTAGCTGTATT................................................................................................. 22 2 1 12.00 12 0 1 2 2 0 7
.................................................................................................ATAAAGCTAGATTACCGAAGTT........................................................... 22 1 1 12.00 12 0 3 5 1 3 0
..................................................................................................TAAAGCTAACTTACCGAAGTTA.......................................................... 22 1 1 12.00 12 11 1 0 0 0 0
.................................................................................................ATAAAGCTTGCTTACCGAAGTTA.......................................................... 23 1 1 12.00 12 12 0 0 0 0 0
...........................................................TCTTTGCTTATCTAGCTGTAT.................................................................................................. 21 1 1 12.00 12 3 5 0 4 0 0
...........................................................TCATTGGTTATCTAGCTGTATG................................................................................................. 22 1 1 12.00 12 0 3 6 2 1 0
............................................................CTTTGGTTTTCTAGCTGTATG................................................................................................. 21 1 1 11.00 11 11 0 0 0 0 0
..................................................................................................TAAAGCTACCTTACCGAAGTTA.......................................................... 22 1 1 11.00 11 8 2 0 1 0 0
............................................................TTTTGGTTATCTAGCTGTATG................................................................................................. 21 1 1 11.00 11 2 4 4 0 1 0
...........................................................TCTTTGGTTATCTAGCAGTATG................................................................................................. 22 1 1 11.00 11 1 4 2 4 0 0
............................................................CTTTGGTTCTCTAGCTGTATGA................................................................................................ 22 1 1 11.00 11 11 0 0 0 0 0
..................................................................................................TGAAGCTAGCTTACCGAAGTTA.......................................................... 22 1 1 11.00 11 0 0 0 0 11 0
...........................................................TCTTAGGTTATCTAGCTGTATG................................................................................................. 22 1 1 11.00 11 0 2 4 2 3 0
...........................................................TCTTTGGTTATCTAGATGTA................................................................................................... 20 1 1 11.00 11 0 7 3 1 0 0
.................................................................................................ATAAATCTAGCTTACCGAAGTT........................................................... 22 1 1 11.00 11 0 5 5 0 1 0
.................................................................................................ATATAGCTAGCTTACCGAAGTT........................................................... 22 1 1 10.00 10 0 0 0 0 10 0
............................................................CTTTGGTTATCTAGCTGT.................................................................................................... 18 0 1 10.00 10 10 0 0 0 0 0
...........................................................TCTTTGGTTATCTCGCTCTATG................................................................................................. 22 2 1 10.00 10 0 8 0 1 0 1
..................................................................................................TAAAGATAGCTTACCGAAGTTA.......................................................... 22 1 1 10.00 10 1 1 7 1 0 0
...........................................................TATTTGGTTATCTAGATGTATGA................................................................................................ 23 2 1 10.00 10 0 2 4 4 0 0
...........................................................TCTGTGGTTATCTAGCTGTA................................................................................................... 20 1 1 10.00 10 0 0 0 0 10 0
.............................................................TCTTGTTATCTAGCTGTATG................................................................................................. 20 2 1 10.00 10 2 2 5 0 1 0
...............................................................TGGTTATCTAGCTGTATGA................................................................................................ 19 0 1 10.00 10 6 0 0 0 4 0
..................................................................................................TAAAGCTAGCTTACCGAAGCT........................................................... 21 1 1 10.00 10 0 1 2 5 0 2
..........................................................TTCTTTGGTTATCTAGCTGTATGA................................................................................................ 24 1 1 10.00 10 9 0 0 0 1 0

Anti-sense strand reads

AGGGAAAAAAAGTTTGTTATGAGGGTGTTTAGAATATATTGTGATACCCACGATACAACAGAAACCAATAGATCGACATACTCACTATTTATTGCAGTATTTCGATCGAATGGCTTCAATTATAATCGCAGACAGGTCGCTTTGTCAGGTTTTTTCCTTTGGGTGTAACGCATATGAG

********************************************(((((((((((((((.(((((((...((((((.(((((((........)).))))).))))))...))))))).))))).))))))))))******************************************** 		Read size # Mismatch Hit Count Total Norm Total V055

head

 M044

female body

 M058

embryo

 V039

embryo
......AGAAAGTTTGTTATGATGGAGT...................................................................................................................................................... 22 3 2 1.00 2 0 1 1 0
............................................................GAAACCATTAGATCGACATA.................................................................................................. 20 1 2 0.50 1 1 0 0 0
.........................................................ACACAAACCATTAGATCGAAATA.................................................................................................. 23 3 2 0.50 1 1 0 0 0
............................................................GATACCAATAGATCGAGTTA.................................................................................................. 20 3 2 0.50 1 1 0 0 0
.........................................................................................................................ATAACCGCACACAGGTCG....................................... 18 2 3 0.33 1 1 0 0 0
................................................................................................GTATTTCGATCCATTGGTTTCA............................................................ 22 3 4 0.25 1 1 0 0 0
.......GAAAGTTTGTTATGATGGAGT...................................................................................................................................................... 21 3 5 0.20 1 0 1 0 0
AGGGCAAAAGAGTATGTTAT.............................................................................................................................................................. 20 3 11 0.09 1 0 0 1 0
.................................................................................................TATTTCGATCTATTGGGTTCA............................................................ 21 3 12 0.08 1 1 0 0 0
...........................................ATACCAACGATACAACAAAG................................................................................................................... 20 3 20 0.05 1 0 0 0 1
.............................................ACCCACGCTACCACAAAAAC................................................................................................................. 20 3 20 0.05 1 0 0 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Type Alignment
droAna3 scaffold_13337:17332389-17332566 - dan-mir-9a Known_mirbase TC-----CC---------TTTTTTT----------------CAAA-CAA----TACT----CC---CACAA-----ATCTTATATAA----CAC--TAT---GGGTGCTATGTTGTCTTTGGTTATCTAGCTGTATGAGTGATAAATAACGTCATAAAGCTAGCTTACCGAAGTTAATATTAGCGTCTGTCCA------------GCGAAACAGTCCAAAAAAGGAAACCCACATTGCGTATACT----C
droBip1 scf7180000396741:632308-632485 - TC-----CC---------TTTTTTT----------------CAAA-CAA----TACT----CC---CACAA-----ATCTTATACAA----CAC--TAT---GGGTGCTATGTTGTCTTTGGTTATCTAGCTGTATGAGTGATAAATAACGTCATAAAGCTAGCTTACCGAAGTTAATATTAGCGTCTGTCCA------------GCAAAACAGTCCAAAAAAGGAAACCCACATTGCGTATACT----C
droKik1 scf7180000302694:81664-81803 + TC-----CC---------TTT--------------------CA-G-CAA----T--G----CC---G---A-----GTGTTACACAATCAACTC--CATACAGGGTGCTATGTTGTCTTTGGTTATCTAGCTGTATGAGTGATAAATAACGTCATAAAGCTAGCTTACCGAAGTTAATATTAGCGTCTGTCCA------------GCGAAA---------------------------------------
droFic1 scf7180000453831:108842-109012 + TC-----GC---------TTT--------------------CG-A-CAA----T--T----GC---C---A-----GTGTTACACAATCCCATC--CATACAGGGTGCTATGTTGTCTTTGGTTATCTAGCTGTATGAGTGATAAATAACGTCATAAAGCTAGCTTACCGAAGTTAATATTAGCGTCTGTCCA------------GCGAAACGG-CC-AAAAAGGAAACCCACGTTGCCTATGC------
droEle1 scf7180000491249:6854971-6855144 + TC-----CC---------TTT--------------------CA-A-CAA----T--T----CG---C---A-----GTGTTATATAATCGACTC--TATACAGGGTGCTATGTTGTCTTTGGTTATCTAGCTGTATGAGTGATAAATAACGTCATAAAGCTAGCTTACCGAAGTTAATATTAGTGTCTGTCCA------------GCGAAACAAACC-AAAAAGCCAACCCACGTTGCGTATACC----G
droRho1 scf7180000779964:5257-5430 + TC-----CC---------TTT--------------------CA-A-CAA----T--T----CC---A---A-----GTGTTATATAACCGACTC--TATACAGGGTGCTATGTTGTCTTTGGTTATCTAGCTGTATGAGTGATAAATAACGTCATAAAGCTAGCTTACCGAAGTTAATATTAGTGTCTGTCCA------------GCGAAACAAACC-AGAAAGTAAACCCACGTTGCGTATACT----T
droBia1 scf7180000302377:2053587-2053755 - TC-----CC---------TTT--------------------CA-G-CGG----T--T----CC---C---A-----GTGTTATGCAATCGACTC--CATACAGGGTGCTATGTTGTCTTTGGTTATCTAGCTGTATGAGTGATAAATAACGTCATAAAGCTAGCTTACCGAAGTTAATATTAGCGTCTGACCA------------GCGAAACAG-CC-G----CGAAACCCACATTGCTCGTACT----G
droTak1 scf7180000415276:67405-67576 + TC-----CC---------TTT--------------------CA-G-CAA----T--T----CA---C---A-----GTGTTATATAATCGACTT--TATACAGGGTGCTATGTTGTCTTTGGTTATCTAGCTGTATGAGTGATAAATAACGTCATAAAGCTAGCTTACCGAAGTTAATATTAGCGTCTGTCCA------------GCGAAACAA-CC-GAAAA-GAAGCACACGTTGCGTATACT----C
droEug1 scf7180000409472:104872-105044 + TC-----CC---------TTT--------------------CA-A-CAA----T--T----CG---C---G-----GCGTTATGCAATCTACTA--TATACAGGGTGCTATGTTGTCTTTGGTTATCTAGCTGTATGAGTGATAAATAACGTCATAAAGCTAGCTTACCGAAGTTAATATTAGCGTCCGTCCA------------GCGAAACAG-CC-AAAAAGCAAGCCCACGTTGCGTATACT----G
dm3 chr3L:19558182-19558356 + dme-mir-9a Known_mirbase TC-----CC---------TTT--------------------CA-A-CCA----T--C----TG---C---A-----GTGTTACACAATCGACTCTATATACAGGGTGCTATGTTGTCTTTGGTTATCTAGCTGTATGAGTGATAAATAACGTCATAAAGCTAGCTTACCGAAGTTAATATTAGCGTCTGCCCA------------GCGAGACAG-CC-AAAAACGAGGCCCACATTGCGTATACT----T
droSim2 3l:19208453-19208627 + dsi-mir-9a Known_mirbase TC-----CC---------TTT--------------------CA-A-CCA----T--T----TG---C---A-----GTGTTACACAACCGGCTCTATATACAGGGTGCTATGTTGTCTTTGGTTATCTAGCTGTATGAGTGATAAATAACGTCATAAAGCTAGCTTACCGAAGTTAATATTAGCGTCTGACCA------------GCGAAACAG-CC-AAAAACGAAGCCCACATTGCGTATACT----T
droSec2 scaffold_29:261335-261509 + dse-mir-9a Known_mirbase TC-----CC---------TTT--------------------CA-A-CCA----T--C----TG---C---A-----GTGTTACAAAACCGGCTCTATATACAGGGTGCTATGTTGTCTTTGGTTATCTAGCTGTATGAGTGATAAATAACGTCATAAAGCTAGCTTACCGAAGTTAATATTAGCGTCTGACCA------------GCGAAACAG-CC-AAAAACGAAGCCCACATTGCGTATGCT----T
droYak3 3L:20989369-20989541 - dya-mir-9a-1 Known_mirbase TC-----CC---------TTT--------------------CA-A-CCA----T--C----CG---C---A-----GTGTTACACAACCGACTC--TATACAGGGTGCTATGTTGTCTTTGGTTATCTAGCTGTATGAGTGATAAATAACGTCATAAAGCTAGCTTACCGAAGTTAATATTAGCGTCTGACCA------------GCGAAACTG-CC-AAAAACAAAACCCACGTTGCGTATACT----T
droEre2 scaffold_4784:19355630-19355802 + der-mir-9a Known_mirbase TC-----CC---------TTT--------------------CA-A-CCA----T--C----TG---C---A-----GTGTTACATAACCGACTC--TATACAGGGTGCTATGTTGTCTTTGGTTATCTAGCTGTATGAGTGATAAATAACGTCATAAAGCTAGCTTACCGAAGTTAATATTAGCGTCTGACCA------------GCGAAACAG-CC-AAAAACAAAGCCCACGTTGCGTATACT----T
dp5 XR_group8:7634774-7634950 + dps-mir-9a Known_mirbase TC--AGATC---------GTT--------------------C----CCA----T--C----GA---T---AGAATGGTGTAATTTAAAGTTCTT--CAATCAGGGTGCTATGTTGTCTTTGGTTATCTAGCTGTATGAGTGATAAATAACGTCATAAAGCTAGCTTACCGAAGTTAATATTAGCGTCTGTCCA------------GCGAAACCG--------AAGAAACCCACGTTACGTACTGCGAGCC
droPer2 scaffold_48:412914-413086 + dpe-mir-9a Known_mirbase TC--AGATC---------GTT--------------------C----CCA----T--C----GG---T---AGAATGGTGTAATTTAAAGTTCTT--CAATCAGGGTGCTATGTTGTCTTTGGTTATCTAGCTGTATGAGTGATAAATAACGTCATAAAGCTAGCTTACCGAAGTTAATATTAGCGTCTGTCCA------------GCGAAAC----C-AA---AGAAACCCACGTTACGTACTGC----G
droWil2 scf2_1100000004540:842229-842344 + dwi-mir-9a Known_mirbase ------------------------------------------------------------------------------------------------------GGGTGCTATGTTGTCTTTGGTTATCTAGCTGTATGAGTGATACATAACGTCATAAAGCTAGCTTACCGAAGTTAATATTAGCGTCTGTTCATCAGTCATGTGAACGAAAAAG----------AAAA----------------------
droVir3 scaffold_13049:13136966-13137131 + dvi-mir-9a Known_mirbase AA-----ACGGCAGCCGCATATTAAGGCGAAACACAGCTAACG-ACCA-------------GC----------------------------CAG--GATACAGGGTGCTATGTTGTCTTTGGTTATCTAGCTGTATGAGTGATAAATAACGTCATAAAGCTAGCTTACCGAAGTTAATATTAGTGTCTGCTCA------------ACGTA-------------------CCACAGCGCGTATACT----T
droMoj3 scaffold_6680:14226480-14226625 - dmo-mir-9a Known_mirbase AGTCAAAGC------------------------------------------------GACAGC---C---A-----ATGGG-----------AA--TATACAGGGTGCTATGTTGTCTTTGGTTATCTAGCTGTATGAGTGATAAATAACGTCATAAAGCTAGCTTACCGAAGTTAATATTAGTGTCTGCTCA------------GCGTAACAA----------------CACAGTGCGTATACT----T
droGri2 scaffold_15110:23882694-23882857 + dgr-mir-9a Known_mirbase CG-----A------------------------------------G-CAACAAGC--AGAAAGCAAAT---AGGATTGTGCAAGTT--TGTGCCG--CATACAGGGTGCTATGTTGTCTTTGGTTATCTAGCTGTATGAGTGATAAATAACGTCATAAAGCTAGCTTACCGAAGTTAATATTAGTGTCTCTTCA------------ACGTAAC-------------------ACGGCGCGTATACG----C

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droAna3
TC-----CC---------TTTTTTT----------------CAAA-CAA----TACT----CC---CACAA-----ATCTTATATAA----CAC--TAT---GGGTGCTATGTTGTCTTTGGTTATCTAGCTGTATGAGTGATAAATAACGTCATAAAGCTAGCTTACCGAAGTTAATATTAGCGTCTGTCCA------------GCGAAACAGTCCAAAAAAGGAAACCCACATTGCGTATACT----CSizeHit CountTotal NormTotalM044

Female-body		M058

Embryo		V039

Embryo		V055

Head		V105

Male-body		V106

Head
...................................................................................................................TCTTTGGTTATCTAGCTGTATG.................................................................................................................22182455.0082455142395765314672932479727215
...................................................................................................................TCTTTGGTTATCTAGCTGTATGA................................................................................................................23147153.00471531571392401627493692986339
...................................................................................................................TCTTTGGTTATCTAGCTGTAT..................................................................................................................21125620.0025620124111188100466056671594
..........................................................................................................................................................TAAAGCTAGCTTACCGAAGTT...........................................................................2112997.002997495269413564391397
..........................................................................................................................................................TAAAGCTAGCTTACCGAAGTTA..........................................................................2212546.002546839258156389290614
.........................................................................................................................................................ATAAAGCTAGCTTACCGAAGTT...........................................................................2212188.00218852625740100435830
...................................................................................................................TCTTTGGTTATCTAGCTGTA...................................................................................................................2011979.0019797424465232446108
.........................................................................................................................................................ATAAAGCTAGCTTACCGAAGTTA..........................................................................2311907.00190711749957117166294
...................................................................................................................TCTTTGGTTATCTAGCTGTATT.................................................................................................................2211759.0017592705670306274234
...................................................................................................................TCTTTGGTTATCTAGCTGTATGT................................................................................................................2311475.00147557710318201413163
....................................................................................................................CTTTGGTTATCTAGCTGTATGA................................................................................................................2211246.0012461218153154
....................................................................................................................CTTTGGTTATCTAGCTGTATG.................................................................................................................2111081.001081104112121411
....................................................................................................................CTTTGGTTATCTAGCTGTAT..................................................................................................................201940.0094093200350
...................................................................................................................TCTTTGGTTATCTAGCTGT....................................................................................................................191611.0061125622912217725
...................................................................................................................TCTTTGGTTATCTAGCTGTATGAA...............................................................................................................241602.00602192781097106119
...................................................................................................................TCTTTGGTTATCTAGCTGTATGAT...............................................................................................................241493.00493221193778093
..........................................................................................................................................................TAAAGCTAGCTTACCGAAGTTAA.........................................................................231400.00400499311741253
...................................................................................................................TCTTTGGTTATCTAGCTGTATGAC...............................................................................................................241311.003116074159216
...................................................................................................................TCTTTGGTTATCTAGCTGTAC..................................................................................................................211272.0027212218014244
...................................................................................................................TCTTTGGTTATCTAGCTGTAA..................................................................................................................211254.002548600355380
...................................................................................................................TCTTTGGTTATCTAGCTGTATGC................................................................................................................231205.0020524294602464
...................................................................................................................TCTTTGGTTATCTAGCTGTATA.................................................................................................................221164.0016452111302941
.........................................................................................................................................................ATAAAGCTAGCTTACCGAAGTTAA.........................................................................241151.0015111314319101
.........................................................................................................................................................ATAAAGCTAGCTTACCGAAG.............................................................................201139.00139140377108
..........................................................................................................................................................TAAAGCTAGCTTACCGAAGT............................................................................201138.001381922183355
.....................................................................................................................TTTGGTTATCTAGCTGTATG.................................................................................................................201132.0013251141081831
.........................................................................................................................................................ATAAAGCTAGCTTACCGAAGT............................................................................211125.0012525171173431
...................................................................................................................TCTTTGGTTATCTAGCTGTT...................................................................................................................201124.00124480016546
.....................................................................................................................TTTGGTTATCTAGCTGTATGA................................................................................................................211116.0011685104656
...................................................................................................................TCTTTGGTTATCTAGCTGTATC.................................................................................................................221106.00106171110401513
...................................................................................................................TCTTTGGTTATCTAGCTGTATGAAA..............................................................................................................25189.008926656739
...................................................................................................................TCTTTGGTTATCTAGCTGTATGTT...............................................................................................................24185.00852110131931
..........................................................................................................................................................TAAAGCTAGCTTACCGAAG.............................................................................19185.00856237562
...................................................................................................................TCTTTGGTTATCTAGCTGTATTT................................................................................................................23180.008045011888
...................................................................................................................TCTTTGGTTATCTAGCTGTATGG................................................................................................................23177.00772716461014
...........................................................................................................................................................AAAGCTAGCTTACCGAAGTTA..........................................................................21174.00746720302
...................................................................................................................TCTTTGGTTATCTAGCTGTAG..................................................................................................................21172.00727207497
.....................................................................................................................TTTGGTTATCTAGCTGTAT..................................................................................................................19169.00695501472
...........................................................................................................................................................AAAGCTAGCTTACCGAAGTT...........................................................................20157.005732502117
..........................................................................................................................................................TAAAGCTAGCTTACCGAAGTTAT.........................................................................23148.00484138725
....................................................................................................................CTTTGGTTATCTAGCTGTA...................................................................................................................19148.00484800000
....................................................................................................................CTTTGGTTATCTAGCTGTATGT................................................................................................................22145.00454400010
......................................................................................................................TTGGTTATCTAGCTGTATG.................................................................................................................19142.004219510116
.........................................................................................................................................................ATAAAGCTAGCTTACCGAAGTTT..........................................................................23133.003311103126
......................................................................................................................TTGGTTATCTAGCTGTATGA................................................................................................................20132.00321381343
...................................................................................................................TCTTTGGTTATCTAGCTGTATGAG...............................................................................................................24132.003210004711
.........................................................................................................................................................ATAAAGCTAGCTTACCGAAGTTAT.........................................................................24128.00285000419
..........................................................................................................................................................TAAAGCTAGCTTACCGAAGTC...........................................................................21127.00270160155
..........................................................................................................................................................TAAAGCTAGCTTACCGAAGTTT..........................................................................22126.00265001911
....................................................................................................................CTTTGGTTATCTAGCTGTATGAT...............................................................................................................23122.00222110000
.........................................................................................................................................................ATAAAGCTAGCTTACCGAAGTC...........................................................................22121.00210170121
.........................................................................................................................................................ATAAAGCTAGCTTACCGAA..............................................................................19121.0021541353
....................................................................................................................CTTTGGTTATCTAGCTGTATGAA...............................................................................................................23119.00191900000
..................................................................................................................GTCTTTGGTTATCTAGCTGTATGA................................................................................................................24119.00191900000
....................................................................................................................CTTTGGTTATCTAGCTGTATT.................................................................................................................21119.00191900000
...................................................................................................................TCTTTGGTTATCTAGCTGTATTC................................................................................................................23118.00181021302
......................................................................................................................TTGGTTATCTAGCTGTAT..................................................................................................................18115.00151400010
..........................................................................................................................................................TAAAGCTAGCTTACCGAAGTA...........................................................................21114.00140100310
.......................................................................................................................TGGTTATCTAGCTGTATG.................................................................................................................18114.0014420044
...................................................................................................................TCTTTGGTTATCTAGCTG.....................................................................................................................18114.0014410711
...................................................................................................................TCTTTGGTTATCTAGCTGTATGTA...............................................................................................................24112.0012300135
....................................................................................................................CTTTGGTTATCTAGCTGT....................................................................................................................18110.00101000000
.......................................................................................................................TGGTTATCTAGCTGTATGA................................................................................................................19110.0010640000
droBip1
TC-----CC---------TTTTTTT----------------CAAA-CAA----TACT----CC---CACAA-----ATCTTATACAA----CAC--TAT---GGGTGCTATGTTGTCTTTGGTTATCTAGCTGTATGAGTGATAAATAACGTCATAAAGCTAGCTTACCGAAGTTAATATTAGCGTCTGTCCA------------GCAAAACAGTCCAAAAAAGGAAACCCACATTGCGTATACT----CSizeHit CountTotal NormTotal
No Reads
droKik1
TC-----CC---------TTT--------------------CA-G-CAA----T--G----CC---G---A-----GTGTTACACAATCAACTC--CATACAGGGTGCTATGTTGTCTTTGGTTATCTAGCTGTATGAGTGATAAATAACGTCATAAAGCTAGCTTACCGAAGTTAATATTAGCGTCTGTCCA------------GCGAAA---------------------------------------SizeHit CountTotal NormTotal
No Reads
droFic1
TC-----GC---------TTT--------------------CG-A-CAA----T--T----GC---C---A-----GTGTTACACAATCCCATC--CATACAGGGTGCTATGTTGTCTTTGGTTATCTAGCTGTATGAGTGATAAATAACGTCATAAAGCTAGCTTACCGAAGTTAATATTAGCGTCTGTCCA------------GCGAAACGG-CC-AAAAAGGAAACCCACGTTGCCTATGC------SizeHit CountTotal NormTotal
No Reads
droEle1
TC-----CC---------TTT--------------------CA-A-CAA----T--T----CG---C---A-----GTGTTATATAATCGACTC--TATACAGGGTGCTATGTTGTCTTTGGTTATCTAGCTGTATGAGTGATAAATAACGTCATAAAGCTAGCTTACCGAAGTTAATATTAGTGTCTGTCCA------------GCGAAACAAACC-AAAAAGCCAACCCACGTTGCGTATACC----GSizeHit CountTotal NormTotal
No Reads
droRho1
TC-----CC---------TTT--------------------CA-A-CAA----T--T----CC---A---A-----GTGTTATATAACCGACTC--TATACAGGGTGCTATGTTGTCTTTGGTTATCTAGCTGTATGAGTGATAAATAACGTCATAAAGCTAGCTTACCGAAGTTAATATTAGTGTCTGTCCA------------GCGAAACAAACC-AGAAAGTAAACCCACGTTGCGTATACT----TSizeHit CountTotal NormTotal
No Reads
droBia1
TC-----CC---------TTT--------------------CA-G-CGG----T--T----CC---C---A-----GTGTTATGCAATCGACTC--CATACAGGGTGCTATGTTGTCTTTGGTTATCTAGCTGTATGAGTGATAAATAACGTCATAAAGCTAGCTTACCGAAGTTAATATTAGCGTCTGACCA------------GCGAAACAG-CC-G----CGAAACCCACATTGCTCGTACT----GSizeHit CountTotal NormTotal
No Reads
droTak1
TC-----CC---------TTT--------------------CA-G-CAA----T--T----CA---C---A-----GTGTTATATAATCGACTT--TATACAGGGTGCTATGTTGTCTTTGGTTATCTAGCTGTATGAGTGATAAATAACGTCATAAAGCTAGCTTACCGAAGTTAATATTAGCGTCTGTCCA------------GCGAAACAA-CC-GAAAA-GAAGCACACGTTGCGTATACT----CSizeHit CountTotal NormTotal
No Reads
droEug1
TC-----CC---------TTT--------------------CA-A-CAA----T--T----CG---C---G-----GCGTTATGCAATCTACTA--TATACAGGGTGCTATGTTGTCTTTGGTTATCTAGCTGTATGAGTGATAAATAACGTCATAAAGCTAGCTTACCGAAGTTAATATTAGCGTCCGTCCA------------GCGAAACAG-CC-AAAAAGCAAGCCCACGTTGCGTATACT----GSizeHit CountTotal NormTotal
No Reads
dm3
TC-----CC---------TTT--------------------CA-A-CCA----T--C----TG---C---A-----GTGTTACACAATCGACTCTATATACAGGGTGCTATGTTGTCTTTGGTTATCTAGCTGTATGAGTGATAAATAACGTCATAAAGCTAGCTTACCGAAGTTAATATTAGCGTCTGCCCA------------GCGAGACAG-CC-AAAAACGAGGCCCACATTGCGTATACT----TSizeHit CountTotal NormTotalGSM154618

Ovary		GSM154620

Ovary		GSM154621

Ovary		GSM154622

Ovary		GSM180328

Head		GSM180329

Mixed-body		GSM180330

Embryo		GSM180331

Embryo		GSM180332

Embryo		GSM180333

Embryo		GSM180334

Larvae		GSM180335

Disc		GSM180336

Pupae		GSM180337

S2		GSM239041

Head		GSM239050

Head		GSM239051

S2		GSM239052

S2		GSM246084

Head		GSM266765

S2		GSM280082

Ovary		GSM280083

Ovary		GSM280084

Ovary		GSM280085

Testis		GSM280086

Ovary		GSM280087

S2-NP		GSM280088

S2-NP		GSM312995

Head		GSM313160

Head		GSM313161

Head		GSM313162

Head		GSM313163

Head		GSM313164

Head		GSM313165

Head		GSM343287

Embryo		GSM379050

Ovary		GSM379051

Ovary		GSM379052

Ovary		GSM379053

Ovary		GSM379054

Ovary		GSM379055

Ovary		GSM379056

Ovary		GSM379057

Ovary		GSM379058

Ovary		GSM379059

Ovary		GSM379060

Ovary		GSM379061

Ovary		GSM379062

Ovary		GSM379063

Ovary		GSM379064

Ovary		GSM379065

Ovary		GSM379066

Ovary		GSM379067

Ovary		GSM424739

S2		GSM424740

S2		GSM424741

S2		GSM467729

Female-body		GSM467730

Female-body		GSM467731

Female-body		M002

CS		M003

Male-body		M004

Male-body		M005

ML-DmD32		M006

ML-DmD32		M029

OSC		M030

OSC		M031

OSC		M032

S2-R+		M033

S2-R+		M034

S2-R+		M035

S2-R+		M036

S2-R+		M037

S2-R+		M038

S2-R+		M039

S2-R+		M048

S2-R+		OSS2

OSS		OSS6

OSS		OSS7

OSS		OSS8

OSS		S1

Head		S10

Embryo		S11

Embryo		S12

Embryo		S13

Embryo		S14

Embryo		S15

S2-GMR		S16

Kc		S17

Larvae		S18

Larvae		S19

Pupae		S2

Head		S20

Pupae		S21

Disc		S22

Head		S23

Female-body		S24

Male-body		S25

Larvae		S26

Larvae		S27

Pupae		S28

Pupae		S29

Head		S3

Male-body		S30

S2-GMR		S31

S2		S32

S2		S33

Kc		S34

Kc		S35

Kc		S4

Female-body		S5

Disc		S6

Embryo		S7

Embryo		S8

S2		S9

Embryo		SRR001337

Head		SRR001338

Head		SRR001339

Head		SRR001340

Head		SRR001341

Head		SRR001342

Head		SRR001343

Head		SRR001344

Head		SRR001345

Head		SRR001346

Head		SRR001347

Head		SRR001348

Head		SRR001349

Head		SRR001664

Head		SRR010951

Ovary		SRR010952

Ovary		SRR010953

Ovary		SRR010954

Ovary		SRR010955

Ovary		SRR010956

Ovary		SRR010957

Ovary		SRR010958

Ovary		SRR010959

Ovary		SRR010960

Ovary		SRR014268

Embryo		SRR014269

Embryo		SRR014270

Embryo		SRR014271

Embryo		SRR014272

Embryo		SRR014273

Ovary		SRR014274

Ovary		SRR014275

Ovary		SRR014276

Ovary		SRR014277

Ovary		SRR014278

Ovary		SRR014279

Ovary		SRR014280

Ovary		SRR014281

Ovary		SRR014282

Ovary		SRR023197

S2		SRR023399

S2		SRR023400

S2		SRR023402

S2		SRR023407

S2		SRR029028

S2		SRR029029

S2		SRR029030

S2		SRR029031

S2		SRR029032

S2		SRR029033

S2		SRR029608

Head		SRR029633

Head		SRR030145

gb3		SRR031692

Head		SRR031693

Head		SRR031694

Head		SRR031696

Head		SRR031697

Head		SRR031698

Head		SRR031699

Head		SRR031700

Head		SRR031701

Head		SRR031702

Head		SRR031703

Head		SRR031704

Head		SRR032092

S2		SRR032093

S2		SRR032094

S2		SRR032095

S2-NP		SRR032096

S2-NP		SRR032152

Head		SRR060643

Testis		SRR060644

Ovary		SRR060645

Testis		SRR060646

Ovary		SRR060647

Ovary		SRR060648

Ovary		SRR060649

Ovary		SRR060650

Testis		SRR060651

Ovary		SRR060652

Testis		SRR060653

Ovary		SRR065151

Ovary		SRR065152

Ovary		SRR065153

Ovary		SRR065154

Ovary		SRR065155

Ovary		SRR065800

Ovary		SRR065801

Ovary		SRR065802

Ovary		SRR065803

Ovary		SRR065804

Ovary		SRR065805

Ovary		SRR065806

Ovary		SRR065807

Ovary		SRR097865

S2-NP		SRR097866

S2-NP		SRR097867

S2-NP		SRR298536

Ovary		SRR298537

Ovary		SRR298711

Ovary		SRR298712

Ovary		SRR317110

Ovary		SRR317111

Ovary		SRR317112

Ovary		SRR317113

Ovary		SRR317114

Ovary		SRR317115

Ovary		SRR317116

Ovary		SRR317117

Ovary		SRR341115

S2		SRR341116

S2		SRR341117

S2		SRR341118

S2		SRR351332

Mixed-body		SRR351333

Mixed-body		T004

OSC		T005

CME-L1		V001

Embryo		V002

Embryo		V003

S2		V006

Female-body		V007

Head		V008

S2		V009

CME-L1		V010

ML-DmD20-C5		V011

Sg4		V012

Male-body		V013

Head		V014

DTT		V015

DreRFHV		V018

Kc167		V019

GM2		V020

S2-R+		V021

ML-DmD21		V022

ML-DmD32		V023

Head		V024

Kc167		V025

S2-R+		V026

1182-2H		V027

ML-DmD21		V028

CME-W1-Cl.8+		V029

ML-DmD9		V030

ML-DmD8		V031

GM2		V032

S1		V033

CME-W1-Cl.8+		V034

ML-DmD16-C3		V035

ML-DmD32		V036

ML-DmD20-C5		V037

S2		V038

S2		V063

Ovary		V0632

Ovary		V064

Ovary		V0642

Ovary		V065

Ovary		V0652

Ovary		V066

Ovary		V0662

Ovary		V067

S2-NP		V073

mbn2		V074

S3		V075

ML-DmBG1-C1		V076

ML-DmBG3-C2		V077

Head		V078

Head		V079

Head		V080

Head		V081

Embryo		V082

Embryo		V083

Male-body		V084

Female-body		V085

CME-W2		V086

Female-body		V088

Ovary		V0882

Ovary		V089

Ovary		V0892

Ovary		V090

Male-body		V091

fGS/OSS		V092

Male-body		V093

Male-body		V094

S2-R+		V095

S2-R+		V096

Ovary		V097

Ovary		V098

Ovary		V125

ML-DmD9		V126

CME-L1		V127

G2		V128

S3		V129

ML-DmBG1-C1		V130

ML-DmBG3-C2		V131

ML-DmD16-C3		V132

ML-DmD32		V133

Sg4		V134

ML-DmD8		V135

CME-W2		V136

Male-body		V137

Head		V138

Male-body		V139

Female-body		V140

Female-body		V141

Female-body		V142

Female-body		V144

OSC		V145

S2		V146

S1		V147

1182-2H		V148

mbn2		GSM1528798

follicle cells
...................................................................................................................TCTTTGGTTATCTAGCTGTATG.................................................................................................................2211191976.001191976000080348361201881051799905000281017284583660065320120151254531142625154671097813536648521665195123198621898722189470003427180000000000000000000009273728820721987962946367536153024635911424163841261223130305932671651641027520816319312088101975761010634651916110328470776666529894610321752143135201227114141301387353764441036539010817522819513830021062041481000002221186030364366488903652592411613600164276313542252465307119015401530420439217186643589144045572055302691000010824901147055233388230736283541318347381100223961424254200014600414742984316328297412941035721176651481021020384035300122001312211422123857617373561562333982168011529952341481835820266684161116442091115249348117931175714202585442991655452663124121744152921724308602160911345056513953674574215344991142024354781700000
...................................................................................................................TCTTTGGTTATCTAGCTGTATGA................................................................................................................231620044.0062004400001596231329693513292485310010015880913280138602421292144464455971421170242925401036321041115141812872371075726000167121760000000000000000000101134796783185759900555162610641697501258310933916113689623133892106697925927462055646220140262164240375840672086211441882794163137391657671435116419521793556218813006111824300309203841736459411477769553899240917636000111550152181639484069973113135165061655054100786270992461010401400441918282662353203200134373003252011699870057413552191068839851101110101298325269621827311426300017011300290542024618149022666841155054263010277810100198811100150024013002006422076851586711395560222288826104896496623877969736541067574641822264799354998551257521549218010067475987652131313723240991227896146393645858469245492300512
...................................................................................................................TCTTTGGTTATCTAGCTGTAT..................................................................................................................211302390.0030239000002066006383730813505710475073542414680303564121485751611432701515214810547384161512226254857233384900058951315700000000000000000321226815779521343111720330393642396451120810361588371095513933604163987025621121744393072021566166464886834478297735298825259918837853001000015198330472396332452483113768641108530799129000100870130102731226006997208303059851405257721236912192662431107001183212974314916900012094470120000039720030072230153669116764356355210432249309677426100710030000570828890925158450327188728154138101110625103010020172310029779629686425210511906780240611624011384895099044070614343673579173698326593251434746722377472060237535443801301007311434541149207252145933902414278120010016
..........................................................................................................................................................TAAAGCTAGCTTACCGAAGTTA..........................................................................22131270.003127000001142274337141180920400342512401016186769865449416523212321118745102610500010000000000000000000000152063341838011001739762531483220931115152384147520813111273914960071324084179171361571283283512360000001000578138030925546441213413150000000010099511000753561827875174764217238513563318000069224329213150002200211000000161000000000079440256228371759447700001090080811780208312120003243300244000001632000000000400001714514841814118700100145359546047316682011395219051376782232702363081025142500100020000335130956094280171150000000
..........................................................................................................................................................TAAAGCTAGCTTACCGAAGTT...........................................................................21126917.00269170000860258013050014001511400303017453223024422634124928231387100000000000000000000000000004149292130012932208144612262350971183005062310111102314137204710715117952761331220712000000000002744991592243231162433000003000005017580447483122734148352193899187128000004961491395160001170132000000030000000001510314515912517113200000000449359112128912002220252020100000195000000000050000171543615730189281190002310681300100212114879434743162883583133866206038160136303802000030020584214110332256364584211100000
...................................................................................................................TCTTTGGTTATCTAGCTGTATGATC..............................................................................................................25119742.00197420000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000108788859001000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
...................................................................................................................TCTTTGGTTATCTAGCTGTATT.................................................................................................................22118350.001835000001000001110000200002460610000000023814161611048103214314106600000000000000000000000000014517725351304434988623124921201351022421001001971195611701733701817186156000000000016235064738415222219164250012000203200021149009010173712707208759000063141378211008059000000131500000000002398459211240000210027371319199436826002759892053100000253201000000010000433429250000223814813114314727872650105391029410310986140600211000000000009328415830563934000000
.........................................................................................................................................................ATAAAGCTAGCTTACCGAAGTT...........................................................................22116934.001693400003014242000021100009701012899273110148132001100005011210211000000000000000000000000000004813583140003830471701111910000050000620435264233113191324821260000000000363387862531710000808010000000000046215110284305148311643051161052125911772907000068175302000902700000030000000000617202001111000100000000206109032461001401170640000023000000000100000330314318018000035025047078431528437122690353111767074126002659030000200005501523622117154171165300000
...................................................................................................................TCTTTGGTTATCTAGCTGTA...................................................................................................................20115365.0015365000010001122402006000119830102206217193472861352144251103507525110002192200000000000000000000079526341001787922724352443207676641211290431117102752058112706218360117531441590015300000008132622025532560400000100000002943980209132922272342217752614312000012880222712000450162000002300000000073798521818234492363200002300128116177943002112196011000000340000010000500009401246113832900002778483436560182180189143126917311320474045881400213147000000000004721441658219402246324100000
.........................................................................................................................................................ATAAAGCTAGCTTACCGAAGTTA..........................................................................23113924.0013924000010326258176064000000615000676820416118776200110216041002321100000000000000000000000000023076939214731009152778815716352712144100111112212820293602711501352701421311000000000049208564308362123415102100000000000440585026812173492292241758330637646320800000138884451000370510000001200000000020803840117203323000012002562090422950007199065000002600000110001000041921012412100002206154239270248253310650123314147115767019320000102000012747219848613239000000
...................................................................................................................TCTTTGGTTATCTAGCTGTATGT................................................................................................................2319160.0091600000510147375010000001133000000000000200020502130321000000000000000000000000000004511061041002517426695531164492828696320112333151312251575021502083618451581070000000010219291011212322100100000000000279233022801361226105114302708000001616110311000570360000000300000502072818101820135794115320000130017893021745001266880570000031000000000000000294207304260000229929418019111818424817508699521250029826900166240000000000025157634783173159179000000
...................................................................................................................TCTTTGGTTATCTAGCTGTATGAA...............................................................................................................2418940.008940000012300815812400002000010000000000004011103020211112101000000000000000000000000000289472291468101074166192292874812625191041251981211539334918118147290700701313195100618756100000000005541013411002025100000000200000300292018600192044114615901691700003511176650002105300000076000000000322454067213125612100025280030823802954100095620500000018001000000000000511510713190000119614810281258366115780231219512344025229000162800000010000110387255571408480000000
...................................................................................................................TCTTTGGTTATCTAGCTGT....................................................................................................................1916934.006934000000000000001521960031141000972184867151131010113104110131010001162000000000000000000100201410246017224166131014231000101923302016213516190105605275511260110121500000922020301035220000001000000011815305899227920538013031702400000100201514000170680000000000000000515634312151828410000000025360233200005310703900000180000000000000001115151121100000124515919124480779577214268591500122221001281100000020000247694246759590141000000
...................................................................................................................TCTTTGGTTATCTAGCTGTATGC................................................................................................................2313520.0035200000000100212000000000140000000000000000100050007220000000000000000000000000000015119720000350203490300661100001112121314210110412032151844287830000001100371917200010301000000000001042380560023010103200000500400000020000000000000000012730001000000001190080450336200033180130000080000000000000001504170300000252010466177047153011901131650705900001000000000007261461577000000
...................................................................................................................TCTTTGGTTATCTAGCTGTATGAT...............................................................................................................2412413.0024130000310201150000010000100000000000000010101001001110000000000000000000000000000008424170012526841522132331812432211230312540601513130637080202200000000000714600010080000000000000005974049007440241230350000001528010300050700000011000000000073409214011250000162123006750081710004614013000001000000000000000004013327000018444383329813017039753980699100523000000000003710010723382818000000
...................................................................................................................TCTTTGGTTATCTAGCTGTAA..................................................................................................................2112161.002161000051000336500000000021000000000000000000114020001000000000000000000000000000003111000070110012220010030020000100052342201031529025220210000000000102000100240000000000000005178039001331027061010750000056421100040300000010000001000001831204221200001860052072600001644020000004000000000010000411362905000011441041271390662017241349031610010200000010000372866615253129000000
...................................................................................................................TCTTTGGTTATCTAGCTGTATATC...............................................................................................................2412122.00212200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001379743000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................TAAAGCTAGCTTACCGAAGTTAA.........................................................................2311973.001973000021000110200000200011000040000000011001003000010100000000000000000000000000201122300010012111220432000103002400219160606944180712000000000044414020000800010000000000054650271031362404420741000000880071000206000000100000000003151111001410000001000013150413900008371069000002400000000001000041002023400001415847534447261708141124020280001010000020000312165421292927000000
...................................................................................................................TCTTTGGTTATCTAGCTGTATA.................................................................................................................2211581.001581000056158153980000000002100000000000000000001010000010000000000000000000000000000022112000208102241100108140000001114010012102062130521070000000000039500000130100000000000002726013506543394280192000003212200005050000000100000000002761500000300001712002428047000011901600000800000000000000001012113000006963284550741017028114263158510011200000000000341187221342629000000
.....................................................................................................................TTTGGTTATCTAGCTGTATG.................................................................................................................2011522.00152200000000000100000000003000006365560110000000001000110100000000000000000000000000000301000010000000300310000000000101000000000102010000000000014727200000900010000000000022034006138081000000000705000060600000000000000000005500170001000000001349106190000813032000003200000001000000002011101000002830231772140970410007014190002100000010000371137728594134000000
...................................................................................................................TCTTTGGTTATCTAGCTGTATC.................................................................................................................2211359.00135900003101111300000100000300000000000000000000003000100000000000000000000000000000111000000012011010004300000100001030511203460717200000000003511120000009100000000000001131701700135030811311000008320111000106000000100000000002111110000000000021170023180350000121501000000800000000001000022130502000001918114571742111024321318005355001100000000000043766326764239000000
....................................................................................................................CTTTGGTTATCTAGCTGTATG.................................................................................................................2111322.0013220000200000000000000000000000402318100000000000000000000000001000000000000000000000000186000102002102016205001000002320003000011302110000000000004222001030400000000000000048050022102343031000008207200070300000000000000000114300100111000000004625019000043080000080000000000000000300030000000293311339816218905010018039520003200000010000501626415484430000000
...................................................................................................................TCTTTGGTTATCTAGCTGTATGAAA..............................................................................................................2511296.00129600001100000100000000000000000000000000000000000000100000000000000000000000000000113183514155045321121218681415480141314262713540024032010117050144000000000006185000010300100000006000034380220061501802502800000097111000205000000300000000000254011316120000220018210370001147011000009000000000000000010102000000053262622163511100311044503033002000000000000016584814191416000000
.....................................................................................................................TTTGGTTATCTAGCTGTATGA................................................................................................................2111234.00123400000000000000000000000300024312586100002000110100000010000000000000000000000000000000131100020400210300340000000000220300100000300020000000000003629300000200000000000000050060201084135420190000034010000002000000000000000000000112614120000220010767031000010608000001200000000000000003000011000001314981001158101020160950110000000000000329286945000000
..........................................................................................................................................................TAAAGCTAGCTTACCGAAGT............................................................................2011210.0012100000110000000000010000150000100000110100000011000000000000000000000000000000000000000000000010010001004100000000000004600010206124000000000001100001007000000000000000932016001373711542570000027521300003000000000100000000007460000000000000000916071300005140700000300000000000000023084306000006277609321427170713104003440010310000000000032135805403624000000
...................................................................................................................TCTTTGGTTATCTAGCTGTATGG................................................................................................................2311182.0011820000202475311000000000130000000000000000000000000000000000000000000000000000000009126130000372233141017188000311111014507037100328140960000000000035710000000000000000000005352044002190613202310000014302000050100000000000000000004500010011000000004623062100011110800000400000000000000002220311000001119179148107281805030290111600110000000000001574203967000000
....................................................................................................................CTTTGGTTATCTAGCTGTATGA................................................................................................................2211145.0011450000001040000000000000110100132738003000001000000000000000221000000000000000000000015053262006822118407031936510000002983000630100260328400000000000870010000300000000000000043240230054632926015000000210040000102000000000000000000011221223210000030033240010000810300000000000000000000005120000000001393913414596030102401014000010000000000010281551193000000
...................................................................................................................TCTTTGGTTATCTAGCTGTAATC................................................................................................................2311097.0010970000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000795301000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................ATAAAGCTAGCTTACCGAAGT............................................................................211989.0098900000000000000000000000000010243010000000000000001000000000000000000000000000000100000000000001000001200000000000000420100100000000000000000360000000300000000000000020940661432705361513000007200000020200000000000000000108700000000000000003402610002160600000200000000000000005012405000007244546771411100610111801817001300000000000051170401411147000000
.........................................................................................................................................................ATAAAGCTAGCTTACCGAAGTTAA.........................................................................241754.007540000000000200000000000100007170000000000000000000001010000000000000000000000000000001020000000010000013120000000003000015010057100010000000000124700000080000000000000002542010583136131912728360000016200000000200000000000000000151100001000000010003709160000143002400000400000000000000000030402000001115141453266301110060123001030000000000013621126310000000
..........................................................................................................................................................TAAAGCTAGCTTACCGAAGTTATC........................................................................241727.007270000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000350377000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................TCTTTGGTTATCTAGCTGTAG..................................................................................................................211719.0071900000200101310000000000400000000001000000000000010000000000000000000000000000000000000004100010010000000000000001100300001100504300000000000000000000100000000000000026150120038030124018000000016000000000300000000000000000013200000000000000005001200001300000000000000000000000140013030000033474461790103901016078000000000000000042370140000000
...................................................................................................................TCTTTGGTTATCTAGCTGTATGAC...............................................................................................................241575.005750000000100011000000000000000000000000000000000000000000000000000000000000000000002012110001140023140031000000000721000740002015061730000000000023200000000000000000000007603000402020100000020010000002000000000000000000010000102000000190123001130050000103050000010000000000000000000110000001943897200001012023001000000000000041130133000000
.........................................................................................................................................................ATAAAGCTAGCTTACCGAAG.............................................................................201543.00543000000000000000062000031000110000018000000000100000000000000000000000000000000000000000000010002000010200000000000000000000010000000000000000010000000100000000000000051401310410126340000011000000100000000000000000002574000000000000000011026100011409000002000000000000000000023010000032213059184212010020060010000000000000281441349177000000
...................................................................................................................TCTTTGGTTATCTAGCTGTT...................................................................................................................201542.005420000000000000000110000010000000000000000000000000020000000000000000000000000000000000000101000101000200000000000000013020200062105001100000000000000002000000000000000101606003306030900000090000000000000000000000000000120120000110000000020002200061805000003000000000000000000300000000014714182101016111250412001020000000000041181314878000000
...................................................................................................................TCTTTGGTTATCTAGCTGTAC..................................................................................................................211542.00542000053001102101000000000000000000000000000000000001000000000000000000000000000002000000031110030100237100000002000017300010002010600000000000000000000010000000000000026250100081006027039000000520000000200000000000000000000000000000000000000010401000002802000002000000000000000010301020000021151028672301900212306190000000000010000142852538000000
.....................................................................................................................TTTGGTTATCTAGCTGTAT..................................................................................................................191509.00509000000000000000000000131000000000000000000002000000010000000000000000000000000000000000000200022100100000000000000001000010003120000000000000040100003000000000000000316091021333143040200000011020000000000000000000000000000103610210000000027703200000404000001000000000000000000001000000010748511530000001014000000000000000061152434000000
...................................................................................................................TCTTTGGTTATCTAGCTG.....................................................................................................................181458.00458000000000000000000000000000030390100001000000000000000000200000000000000000001000006100010300010000103000000000000303303001006487100120000000000000000000000000000000041501130290441605110000014120000000000000000000000000038400100000000000006604500001000000002000000000000000000000010000142162541866301600001503500101000000000100222024000000
....................................................................................................................CTTTGGTTATCTAGCTGTAT..................................................................................................................201398.00398000000000200000000000014000000000000000000100000000000001171000000000000000000000100040001124125350027000000000002000400001000202200000000000130000001100000000100000031180150023412711501800000016000000010000000000000000000000100120101000000007100100001002000001000000000000000120300030000087915813300200004056000010000000000021641101000000
..........................................................................................................................................................TAAAGCTAGCTTACCGAAG.............................................................................191389.00389000000000000000011000010000020100000000000010000000000000000000000000000000000000000000000100000000000000000000200100000000201100000000000000100000004000000000000000210010200122104000003202000000000000000000000000024500000000000010000102800008708000003000000000010000000000010000022283741115101020050420000000000000000117520381710100000
...........................................................................................................................................................AAAGCTAGCTTACCGAAGTT...........................................................................201350.00350000000000000000000000000000113661020000000000000000000000000000000000000000000000000000000000000000000000000000000006603015151000200000000000414000000000000000000000002436014427747121643100000300020000000000000000000000000001000000000000000000013000013010000000000000000000000300000000000623810011000000100000000000000000005741011000000
...................................................................................................................TCTTTGGTTATCTAGCTGTATGTT...............................................................................................................241346.00346000000000000000000000000000000000000000000100001000000000000000000000000000000000000000000000010000013000000000000103101001500032000000000000000000100000000000000000770500180203012000000910000000000000000000000000001002001121100000100030060000730000000200000000000000000000010000001510149113102020010012140000000000000000165032137913000000
...................................................................................................................TCTTTGGTTATCTAGCTGTATTC................................................................................................................231313.0031300000000001000000000000000000000000000010000000000000000000000000000000000000000000114000002017200000000000001000000311600000004116535000000000000410000000100000000000000440700000000000000001101000000000000000000000000000100010000000018400126012000022010000000000000000000000000000000000100591231000000802600000000000000000000000000000
...................................................................................................................TCTTTGGTTATCTAGCTGTATTT................................................................................................................231299.0029900000000000000000000000000000000000100000000000000000000000000000000000000000000054211001010010000000000000000000000073010100013013100000000000022100101050000000000000005308001202060620000082030000001000000010000000000000000000020000010020130303000128040000000000000000000000100000000000189793340080000407900000000000000005540001000000
.........................................................................................................................................................ATAAAGCTAGCTTACCGAA..............................................................................191297.00297000000000000000020000000000011010100000000000000000000000000000000000000000000000000000000000000000000000000000000002050000000000000000000001100000000000000000000000330002001101430000000000000000000000000000000000000110000000000000000320000100010200000000000000000000000000000000009617201010010010202200000020000000001512863136000000
.....................................................................................................................TTTGGTTATCTAGCTGTATGATC..............................................................................................................231293.002930000000000000000000000000000000000000000000000000000000000000000000000000000000000002000001000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000153135000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................AAAGCTAGCTTACCGAAGTTA..........................................................................211292.0029200000000000000000000000000000000000000000011000000000000100000000000000000000000010050000000000000000000000000000000920104130000100000000006290000100000000000000000030270141071111402514920000027000000000000000000000000000001000100001000000001101000000100000002000000000000000000000120000031028200000000100200000000000000000130000000000
...................................................................................................................TCTTTGGTTATCTAGCTGTATGAG...............................................................................................................241278.00278000000001100000000000010000010000000000000000000000000005440000000000000000000000041311001101120242425013422001000203300013800000000000000011000000002000000000000000330600230215041000004300000000100000001000000000010100011010000010006200300003104000001000000000000000002000000000074456830000100505120000000000000000727112663000000
..........................................................................................................................................................TAAAGCTAGCTTACCGAAGTTAT.........................................................................231277.0027700000000000000000100001000000000000001000010000000000000000000000000000000000000000000000000001000001000000000000000000000000101000000000000100000000300000000000000031020014030201000000320000001000000000000000000003100000000000000300130414000013140100000050000000000100000001020100000137111623240401003025002111000000000012401521612000000
.........................................................................................................................................................ATAAAGCTAGCTTACCGA...............................................................................181235.00235000000000000000010000000000020001200000000000000000000000000000000000000000000010001000000000010000000000000000000002040000000210000000000000000000000000000000000000029000000002312000000000000000000000000000000000000110000000000000000010100000040000000100000000000000000000000000008111736600006000020210000000000000000055172053000000
......................................................................................................................TTGGTTATCTAGCTGTATG.................................................................................................................191232.002320000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000011000100000000010001000000000000100000000000011030000010000000000000000100001801100004000000100000020100000001000000000006500000000000000001460100000000000000100000000000000001230000000002653163061020000404140010000000000000512951096000000
.........................................................................................................................................................ATAAAGCTAGCTTACCGAAGTTATC........................................................................251199.00199000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010198000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................TTGGTTATCTAGCTGTATGA................................................................................................................201191.0019100000000010000000000000000000000000000000000000000000000000000000000000000000000000820000000000000010000000000110010300000000200000000000000140000000000000000000000002040001111200021000003200000000000000000000000000201100000000000000001260010000010000000000000000000000004011000000005314262433010100204300001000000000002752010000000
droSim2
TC-----CC---------TTT--------------------CA-A-CCA----T--T----TG---C---A-----GTGTTACACAACCGGCTCTATATACAGGGTGCTATGTTGTCTTTGGTTATCTAGCTGTATGAGTGATAAATAACGTCATAAAGCTAGCTTACCGAAGTTAATATTAGCGTCTGACCA------------GCGAAACAG-CC-AAAAACGAAGCCCACATTGCGTATACT----TSizeHit CountTotal NormTotalM023

Head		M024

Male-body		M025

Embryo		M053

Female-body		O001

Testis		O002

Head		SRR553485

Ovary		SRR553486

Ovary		SRR553487

Ovary		SRR553488

Ovary		SRR618934

Ovary		V044

Embryo		SRR902008

Ovary		SRR902009

Testis		SRR1275487

Male larvae		SRR1275485

Male prepupae		SRR1275483

Male prepupae
...................................................................................................................TCTTTGGTTATCTAGCTGTATGA................................................................................................................231379049.0037904939411185541406661179819446218923479758566419010021390127754235193
...................................................................................................................TCTTTGGTTATCTAGCTGTATG.................................................................................................................221162934.00162934159788255294608013104250200418952255518575205552148354101440
...................................................................................................................TCTTTGGTTATCTAGCTGTAT..................................................................................................................21170900.0070900302091076365078383111232503079103712466488902288102
...................................................................................................................TCTTTGGTTATCTAGCTGTATGG................................................................................................................23146036.00460366510428535126130033241215701001
...................................................................................................................TCTTTGGTTATCTAGCTGTA...................................................................................................................20114374.00143744403167844443137471638461423694216138164234
...................................................................................................................TCTTTGGTTATCTAGCTGTATGAA...............................................................................................................2415310.005310933492146526500243995388381792374917
..........................................................................................................................................................TAAAGCTAGCTTACCGAAGTTA..........................................................................2213103.00310312440176150523107316385251825016010
...................................................................................................................TCTTTGGTTATCTAGCTG.....................................................................................................................1812566.00256642311930534681153211163200121741
...................................................................................................................TCTTTGGTTATCTAGCTGTATGT................................................................................................................2312401.002401104246734718800122394102311409000
...................................................................................................................TCTTTGGTTATCTAGCTGTATT.................................................................................................................2212212.0022123741259920039351159100000
...................................................................................................................TCTTTGGTTATCTAGCTGTAC..................................................................................................................2112186.002186157836323850010100000000
...................................................................................................................TCTTTGGTTATCTAGCTGTATGC................................................................................................................2312074.002074726183103520005342915900000
...................................................................................................................TCTTTGGTTATCTAGCTGT....................................................................................................................1911931.001931107334268686813431946886401029
...................................................................................................................TCTTTGGTTATCTAGCTGTATGAAA..............................................................................................................2511649.0016494592694433300156268104040010101
..........................................................................................................................................................TAAAGCTAGCTTACCGAAGTT...........................................................................2111517.001517281919643174553456293451105000
...................................................................................................................TCTTTGGTTATCTAGCTGTATGAT...............................................................................................................2411100.00110032416331446006181248112102000
....................................................................................................................CTTTGGTTATCTAGCTGTATGA................................................................................................................221918.009181364375931503323001200002
...................................................................................................................TCTTTGGTTATCTAGCTGTATGAC...............................................................................................................241765.007651775441260012433603102010
.........................................................................................................................................................ATAAAGCTAGCTTACCGAAGTTA..........................................................................231657.0065764105279621018219375020000
....................................................................................................................CTTTGGTTATCTAGCTGTAT..................................................................................................................201627.00627420540175503240000000
....................................................................................................................CTTTGGTTATCTAGCTGTATG.................................................................................................................211534.0053482145418072804201000
.........................................................................................................................................................ATAAAGCTAGCTTACCGAAGTT...........................................................................221516.00516545461115178584124705000
...................................................................................................................TCTTTGGTTATCTAGCTGTAG..................................................................................................................211480.0048024213265380000000300000
...................................................................................................................TCTTTGGTTATCTAGCTGTAA..................................................................................................................211399.003992188115900922800100000
...................................................................................................................TCTTTGGTTATCTAGCTGTT...................................................................................................................201366.0036628074390000000000000
..........................................................................................................................................................TAAAGCTAGCTTACCGAAGTTAA.........................................................................231335.003353138111067130102000
.....................................................................................................................TTTGGTTATCTAGCTGTATGA................................................................................................................211331.00331922925008231017705303001
...................................................................................................................TCTTTGGTTATCTAGCTGTATA.................................................................................................................221300.003001302830350046141004300000
...................................................................................................................TCTTTGGTTATCTAGCTGTATGTT...............................................................................................................241256.00256141871430031420100000
...................................................................................................................TCTTTGGTTATCTAGCTGG....................................................................................................................191247.00247149811600000000100000
...................................................................................................................TCTTTGGTTATCTAGCTGC....................................................................................................................191237.00237174441810000000000000
.....................................................................................................................TTTGGTTATCTAGCTGTATG.................................................................................................................201205.002050132000432313013700010
...................................................................................................................TCTTTGGTTATCTAGCT......................................................................................................................171165.0016500000003155000193993
...................................................................................................................TCTTTGGTTATCTAGCTGTATC.................................................................................................................221143.0014318833000134010300000
...................................................................................................................TCTTTGGTTATCTAGCTGTATGAG...............................................................................................................241133.00133361142323101890800000
...................................................................................................................TCTTTGGTTATCTAGCTGTATGAAAA.............................................................................................................261132.00132413022300112590000000
......................................................................................................................TTGGTTATCTAGCTGTATGA................................................................................................................20193.0093623380004111811000000
.........................................................................................................................................................ATAAAGCTAGCTTACCGAAGTTAA.........................................................................24186.0086010000000207804010
...................................................................................................................TCTTTGGTTATCTAGCTGTG...................................................................................................................20183.008318204320000000000000
...................................................................................................................TCTTTGGTTATCTAG........................................................................................................................15175.007500000022212320042514
...................................................................................................................TCTTTGGTTATCTAGCTGTATGAAC..............................................................................................................25165.00651443800000340200000
...................................................................................................................TCTTTGGTTATCTAGCTGA....................................................................................................................19161.00615010010000000000000
...................................................................................................................TCTTTGGTTATCTAGCTGTATGTA...............................................................................................................24157.00572921410000010100000
..........................................................................................................................................................TAAAGCTAGCTTACCGAAGT............................................................................20154.0054530452520531100000
....................................................................................................................CTTTGGTTATCTAGCTGTA...................................................................................................................19149.004910022111500000000000
...................................................................................................................TCTTTGGTTATCTAGC.......................................................................................................................16144.0044000000003910034618
..........................................................................................................................................................TAAAGCTAGCTTACCGAAG.............................................................................19141.0041110352700000400000
.....................................................................................................................TTTGGTTATCTAGCTGTAT..................................................................................................................19139.00391312152001230000000
......................................................................................................................TTGGTTATCTAGCTGTATG.................................................................................................................19138.0038004300011651800000
........................................................................................................................GGTTATCTAGCTGTATGA................................................................................................................18137.00372311000004132200000
.....................................................................................................................TTTGGTTATCTAGCTGTATT.................................................................................................................20136.0036000000000003600000
.......................................................................................................................TGGTTATCTAGCTGTATGA................................................................................................................19133.00330020001110144100000
...................................................................................................................TCTTTGGTTATCTAGCTGTATGAAG..............................................................................................................25130.0030561300000310200000
...................................................................................................................TCTTTGGTTATCTAGCTGTATGACA..............................................................................................................25128.00281331000000000200000
...................................................................................................................TCTTTGGTTATCTAGCTGTATTT................................................................................................................23127.002776040003000700000
...................................................................................................................TCTTTGGTTATCTAGCTGTATGCA...............................................................................................................24125.002594910010000100000
..........................................................................................................................................................TAAAGCTAGCTTACCGAAGTTAT.........................................................................23125.0025000000000002500000
....................................................................................................................CTTTGGTTATCTAGCTGTATGAA...............................................................................................................23122.0022200200000000000000
...........................................................................................................................................................AAAGCTAGCTTACCGAAGTTA..........................................................................21121.0021301110200000400000
...........................................................................................................................TATCTAGCTGTATGA................................................................................................................15121.0021000000005151000000
...................................................................................................................TCTTTGGTTATCTAGCTGTC...................................................................................................................20120.0020181000000010000000
.........................................................................................................................GTTATCTAGCTGTATGA................................................................................................................17120.002000000006770000000
....................................................................................................................CTTTGGTTATCTAGCTGTATGT................................................................................................................22119.0019000180000000001000
..........................................................................................................................TTATCTAGCTGTATGA................................................................................................................16118.0018000000001431000000
...................................................................................................................TCTTTGGTTATCTAGCTGTAAA.................................................................................................................22117.001795030000000000000
..........................................................................................................................TTATCTAGCTGTATG.................................................................................................................15116.0016000000101122000000
....................................................................................................................CTTTGGTTATCTAGCTGTATGG................................................................................................................22115.0015101310000000000000
.........................................................................................................................................................ATAAAGCTAGCTTACCGAAGT............................................................................21115.001521131000121300000
...................................................................................................................TCTTTGGTTATCTAGCTGTATGATA..............................................................................................................25115.001551310001200200000
...................................................................................................................TCTTTGGTTATCTAGCTGTATTC................................................................................................................23114.0014100000010001200000
.....................................................................................................................TTTGGTTATCTAGCTGTATGATC..............................................................................................................23114.0014201100000000001000
...................................................................................................................TCTTTGGTTATCTAGCTGTGG..................................................................................................................21113.001363400000000000000
droSec2
TC-----CC---------TTT--------------------CA-A-CCA----T--C----TG---C---A-----GTGTTACAAAACCGGCTCTATATACAGGGTGCTATGTTGTCTTTGGTTATCTAGCTGTATGAGTGATAAATAACGTCATAAAGCTAGCTTACCGAAGTTAATATTAGCGTCTGACCA------------GCGAAACAG-CC-AAAAACGAAGCCCACATTGCGTATGCT----TSizeHit CountTotal NormTotalM054

Female-body		V113

Male-body		V114

Embryo		V115

Head
...................................................................................................................TCTTTGGTTATCTAGCTGTATG.................................................................................................................221235175.00235175159954970813400535467
...................................................................................................................TCTTTGGTTATCTAGCTGTATGA................................................................................................................231134949.001349491820717385899219436
...................................................................................................................TCTTTGGTTATCTAGCTGTAT..................................................................................................................21133076.003307616283784840694876
..........................................................................................................................................................TAAAGCTAGCTTACCGAAGTTA..........................................................................2219922.00992258262468571859
..........................................................................................................................................................TAAAGCTAGCTTACCGAAGTT...........................................................................2114781.004781266131413411860
.........................................................................................................................................................ATAAAGCTAGCTTACCGAAGTT...........................................................................2213539.00353927812367591266
.........................................................................................................................................................ATAAAGCTAGCTTACCGAAGTTA..........................................................................2312709.0027092882111758452
...................................................................................................................TCTTTGGTTATCTAGCTGTA...................................................................................................................2011866.001866778527170391
...................................................................................................................TCTTTGGTTATCTAGCTGTATGAA...............................................................................................................2411819.001819306373869271
....................................................................................................................CTTTGGTTATCTAGCTGTATGA................................................................................................................2211498.00149813591411312
....................................................................................................................CTTTGGTTATCTAGCTGTATG.................................................................................................................2111239.0012391086369720
....................................................................................................................CTTTGGTTATCTAGCTGTAT..................................................................................................................2011197.0011971188252
...................................................................................................................TCTTTGGTTATCTAGCTGTATGT................................................................................................................2311138.001138439277261161
..........................................................................................................................................................TAAAGCTAGCTTACCGAAGTTAA.........................................................................231837.008371146547233
.....................................................................................................................TTTGGTTATCTAGCTGTATG.................................................................................................................201749.007495939544107
...................................................................................................................TCTTTGGTTATCTAGCTGT....................................................................................................................191672.0067227141120240
.....................................................................................................................TTTGGTTATCTAGCTGTATGA................................................................................................................211483.00483762035829
...................................................................................................................TCTTTGGTTATCTAGCTGTATGAT...............................................................................................................241441.004417810121250
...................................................................................................................TCTTTGGTTATCTAGCTGTATGAAA..............................................................................................................251391.003913098163100
...................................................................................................................TCTTTGGTTATCTAGCTGTATT.................................................................................................................221359.00359157894667
...................................................................................................................TCTTTGGTTATCTAGCTGTAA..................................................................................................................211356.0035696995156
...................................................................................................................TCTTTGGTTATCTAGCTGTATGG................................................................................................................231253.00253271514170
.........................................................................................................................................................ATAAAGCTAGCTTACCGAAG.............................................................................201243.0024354711180
...................................................................................................................TCTTTGGTTATCTAGCTGTATA.................................................................................................................221214.0021436468646
.........................................................................................................................................................ATAAAGCTAGCTTACCGAAGTTAA.........................................................................241206.0020631514741
..........................................................................................................................................................TAAAGCTAGCTTACCGAAGT............................................................................201196.001966752293
.........................................................................................................................................................ATAAAGCTAGCTTACCGAAGT............................................................................211190.0019015841477
...................................................................................................................TCTTTGGTTATCTAGCTGTATGC................................................................................................................231152.0015213249421
...................................................................................................................TCTTTGGTTATCTAGCTGTT...................................................................................................................201145.001455749039
...................................................................................................................TCTTTGGTTATCTAGCTGTATC.................................................................................................................221134.0013414296922
...................................................................................................................TCTTTGGTTATCTAGCTGTATGAC...............................................................................................................241131.001311679414
..........................................................................................................................................................TAAAGCTAGCTTACCGAAG.............................................................................191130.001305811106
.....................................................................................................................TTTGGTTATCTAGCTGTAT..................................................................................................................19197.00975751619
..........................................................................................................................................................TAAAGCTAGCTTACCGAAGTTAT.........................................................................23189.0089064439
...................................................................................................................TCTTTGGTTATCTAGCTGTAG..................................................................................................................21185.0085664132
...................................................................................................................TCTTTGGTTATCTAGCTGTATGAG...............................................................................................................24163.0063853812
......................................................................................................................TTGGTTATCTAGCTGTATG.................................................................................................................19153.0053154286
...........................................................................................................................................................AAAGCTAGCTTACCGAAGTTA..........................................................................21151.0051352122
...................................................................................................................TCTTTGGTTATCTAGCTG.....................................................................................................................18148.0048102126
....................................................................................................................CTTTGGTTATCTAGCTGTA...................................................................................................................19144.004443100
......................................................................................................................TTGGTTATCTAGCTGTATGA................................................................................................................20138.0038142202
...................................................................................................................TCTTTGGTTATCTAGCTGTATGTT...............................................................................................................24136.0036413316
...........................................................................................................................................................AAAGCTAGCTTACCGAAGTT...........................................................................20136.003623283
..........................................................................................................................................................TAAAGCTAGCTTACCGAAGTTT..........................................................................22135.0035410318
....................................................................................................................CTTTGGTTATCTAGCTGTATGT................................................................................................................22132.003232000
...................................................................................................................TCTTTGGTTATCTAGCTGTAC..................................................................................................................21126.00264868
....................................................................................................................CTTTGGTTATCTAGCTGTATT.................................................................................................................21124.002424000
.........................................................................................................................................................ATAAAGCTAGCTTACCGAAGTTAT.........................................................................24122.002201129
.........................................................................................................................................................ATAAAGCTAGCTTACCGAA..............................................................................19120.002002414
.........................................................................................................................................................ATAAAGCTAGCTTACCGA...............................................................................18119.001902611
...................................................................................................................TCTTTGGTTATCTAGCTGTATGAAAA.............................................................................................................26118.001833102
.......................................................................................................................TGGTTATCTAGCTGTATG.................................................................................................................18118.001852101
..........................................................................................................................................................TAAAGCTAGCTTACCGAAGTTAC.........................................................................23117.001700152
.........................................................................................................................................................ATAAAGCTAGCTTACCGAAGTTT..........................................................................23116.00163814
....................................................................................................................CTTTGGTTATCTAGCTGTATGAA...............................................................................................................23115.001514001
.......................................................................................................................TGGTTATCTAGCTGTATGA................................................................................................................19114.00142291
...................................................................................................................TCTTTGGTTATCTAGCTGA....................................................................................................................19114.00143047
....................................................................................................................CTTTGGTTATCTAGCTGT....................................................................................................................18114.001414000
...................................................................................................................TCTTTGGTTATCTAGCTGTATGTA...............................................................................................................24112.001210011
..........................................................................................................................................................TAAAGCTAGCTTACCGAA..............................................................................18112.00120192
...................................................................................................................TCTTTGGTTATCTAGCTGTAAA.................................................................................................................22112.00122406
......................................................................................................................TTGGTTATCTAGCTGTAT..................................................................................................................18111.00119011
...................................................................................................................TCTTTGGTTATCTAGCTGTATTT................................................................................................................23111.00115501
...................................................................................................................TCTTTGGTTATCTAGCTGTGA..................................................................................................................21110.00100280
...................................................................................................................TCTTTGGTTATCTAGCTGTAGA.................................................................................................................22210.002040142
...................................................................................................................TCTTTGGTTATCTAGCTGTATGAAC..............................................................................................................2519.0091251
............................................................................................................................................................AAGCTAGCTTACCGAAGTTA..........................................................................2019.0092160
..................................................................................................................GTCTTTGGTTATCTAGCTGTATGA................................................................................................................2419.0099000
..................................................................................................................GTCTTTGGTTATCTAGCTGTAT..................................................................................................................2219.0099000
..................................................................................................................GTCTTTGGTTATCTAGCTGTATG.................................................................................................................2319.0099000
...................................................................................................................TCTTTGGTTATCTAGCTGTATGAAG..............................................................................................................2519.0091134
...................................................................................................................TCTTTGGTTATCTAGCTGTTG..................................................................................................................2119.0092160
...................................................................................................................TCTTTGGTTATCTAGCTGTATGTAA..............................................................................................................2518.0082105
....................................................................................................................CTTTGGTTATCTAGCTGTATGAT...............................................................................................................2318.0086110
droYak3
TC-----CC---------TTT--------------------CA-A-CCA----T--C----CG---C---A-----GTGTTACACAACCGACTC--TATACAGGGTGCTATGTTGTCTTTGGTTATCTAGCTGTATGAGTGATAAATAACGTCATAAAGCTAGCTTACCGAAGTTAATATTAGCGTCTGACCA------------GCGAAACTG-CC-AAAAACAAAACCCACGTTGCGTATACT----TSizeHit CountTotal NormTotalM026

Head		M043

Female-body		M056

Embryo		V046

Embryo		V052

Head		V058

Head		V120

Male-body		SRR1275488

Male larvae		SRR1275486

Male prepupae		SRR1275484

Male prepupae		GSM1528802

follicle cells
...................................................................................................................TCTTTGGTTATCTAGCTGTATGA................................................................................................................232223497.0044699410306295693684402506725234070687723101009
...................................................................................................................TCTTTGGTTATCTAGCTGTATG.................................................................................................................222110485.0022097030542219012149045129405265801843772290
...................................................................................................................TCTTTGGTTATCTAGCTGTAT..................................................................................................................21220153.0040306493413150124447682277383229000100
...................................................................................................................TCTTTGGTTATCTAGCTGTA...................................................................................................................2026345.00126906876871087026911541691050
..........................................................................................................................................................TAAAGCTAGCTTACCGAAGTTA..........................................................................2222988.505977191628177414891686132860000
..........................................................................................................................................................TAAAGCTAGCTTACCGAAGTT...........................................................................2122576.505153663228593261985945370010
.........................................................................................................................................................ATAAAGCTAGCTTACCGAAGTT...........................................................................2221715.0034300159275330821781091010
...................................................................................................................TCTTTGGTTATCTAGCTGTATGAA...............................................................................................................2421544.00308822750019051585011512012100
...................................................................................................................TCTTTGGTTATCTAGCTGTATGT................................................................................................................2321408.502817273583145985841951380000
....................................................................................................................CTTTGGTTATCTAGCTGTATGA................................................................................................................2221394.502789323274191655140000
...................................................................................................................TCTTTGGTTATCTAGCTGTATGG................................................................................................................2321336.002672200542552582850000
...................................................................................................................TCTTTGGTTATCTAGCTGTAC..................................................................................................................2121301.5026033471224113820000
...................................................................................................................TCTTTGGTTATCTAGCTGTATT.................................................................................................................2221049.0020986115141777617420310000
....................................................................................................................CTTTGGTTATCTAGCTGTATG.................................................................................................................212953.001906116991493402210000
.........................................................................................................................................................ATAAAGCTAGCTTACCGAAGTTA..........................................................................232843.00168645075714572688302100
....................................................................................................................CTTTGGTTATCTAGCTGTAT..................................................................................................................202537.00107411060413320000
...................................................................................................................TCTTTGGTTATCTAGCTGTATGAT...............................................................................................................242468.0093694172532382636380000
...................................................................................................................TCTTTGGTTATCTAGCTGTATGC................................................................................................................232359.0071876115134476520000
...................................................................................................................TCTTTGGTTATCTAGCTGTATA.................................................................................................................222238.00476125435126129120000
...................................................................................................................TCTTTGGTTATCTAGCTGT....................................................................................................................192231.00462831658244657211030
...................................................................................................................TCTTTGGTTATCTAGCTGTATGAC...............................................................................................................242206.504136021298292210000
.....................................................................................................................TTTGGTTATCTAGCTGTATGA................................................................................................................212206.504130110228553790010
...................................................................................................................TCTTTGGTTATCTAGCT......................................................................................................................172193.0038600000005713280
..........................................................................................................................................................TAAAGCTAGCTTACCGAAGTTAA.........................................................................232185.0037005422228520410000
...................................................................................................................TCTTTGGTTATCTAGCTGTATC.................................................................................................................222184.003682162526472250000
...................................................................................................................TCTTTGGTTATCTAGCTGTATGAAA..............................................................................................................252160.00320111369125623280000
.....................................................................................................................TTTGGTTATCTAGCTGTATG.................................................................................................................202152.0030408361120512230000
..........................................................................................................................................................TAAAGCTAGCTTACCGAAGT............................................................................202134.002684341704724250000
..........................................................................................................................................................TAAAGCTAGCTTACCGAAGTC...........................................................................212113.502270022610000000
.........................................................................................................................................................ATAAAGCTAGCTTACCGAAGTC...........................................................................222107.502150021500000000
...........................................................................................................................................................AAAGCTAGCTTACCGAAGTTA..........................................................................21271.501430129930200000
.........................................................................................................................................................ATAAAGCTAGCTTACCGAAGT............................................................................21264.50129018781413150000
......................................................................................................................TTGGTTATCTAGCTGTATGA................................................................................................................20263.501272298690010000
...................................................................................................................TCTTTGGTTATCTAGCTG.....................................................................................................................18262.0012460531001131220
.........................................................................................................................................................ATAAAGCTAGCTTACCGAAGTTAA.........................................................................24259.5011901767808100000
...................................................................................................................TCTTTGGTTATCTAGCTGTATGTT...............................................................................................................24254.5010956271215260000
...................................................................................................................TCTTTGGTTATCTAGCTGTAA..................................................................................................................21346.3313915571421423140000
...................................................................................................................TCTTTGGTTATCTAGC.......................................................................................................................16246.00920000000110810
...........................................................................................................................................................AAAGCTAGCTTACCGAAGTT...........................................................................20238.00760432820210000
...................................................................................................................TCTTTGGTTATCTAGCTGTAG..................................................................................................................21236.00724071930120000
...................................................................................................................TCTTTGGTTATCTAGCTGTT...................................................................................................................20236.00721173614760000
.....................................................................................................................TTTGGTTATCTAGCTGTAT..................................................................................................................19235.0070145733740000
......................................................................................................................TTGGTTATCTAGCTGTATG.................................................................................................................19230.00600213070020000
....................................................................................................................CTTTGGTTATCTAGCTGTA...................................................................................................................19228.5057050700000000
...................................................................................................................TCTTTGGTTATCTAGCTGTATGAG...............................................................................................................24228.50576241750140000
....................................................................................................................CTTTGGTTATCTAGCTGTATGT................................................................................................................22225.0050047300000000
..........................................................................................................................................................TAAAGCTAGCTTACCGAAGTTAT.........................................................................23223.0046029271430000
....................................................................................................................CTTTGGTTATCTAGCTGTATGAA...............................................................................................................23222.0044041210000000
.......................................................................................................................TGGTTATCTAGCTGTATGA................................................................................................................19218.50370111922300000
...................................................................................................................TCTTTGGTTATCTAGCTGTATGTA...............................................................................................................24216.003279703420000
........................................................................................................................................................CATAAAGCTAGCTTACCGAAGTT...........................................................................23214.5029012800000000
..........................................................................................................................................................TAAAGCTAGCTTACCGAAGTTAC.........................................................................23214.50290114110120000
..........................................................................................................................................................TAAAGCTAGCTTACCGAAGC............................................................................20214.0028002800000000
.....................................................................................................................TTTGGTTATCTAGCTGTATT.................................................................................................................20213.5027020241000000
.......................................................................................................................TGGTTATCTAGCTGTATG.................................................................................................................18213.0026091240100000
...................................................................................................................TCTTTGGTTATCTAGCTGC....................................................................................................................19312.67381901801000000
...................................................................................................................TCTTTGGTTATCTAGCTGTATTT................................................................................................................23312.0036070351920000
.........................................................................................................................................................ATAAAGCTAGCTTACCGAAG.............................................................................20212.002418102660000
droEre2
TC-----CC---------TTT--------------------CA-A-CCA----T--C----TG---C---A-----GTGTTACATAACCGACTC--TATACAGGGTGCTATGTTGTCTTTGGTTATCTAGCTGTATGAGTGATAAATAACGTCATAAAGCTAGCTTACCGAAGTTAATATTAGCGTCTGACCA------------GCGAAACAG-CC-AAAAACAAAGCCCACGTTGCGTATACT----TSizeHit CountTotal NormTotalM055

Female-body		M057

Embryo		V060

Head		V040

Embryo		V107

Male-body		V108

Head		GSM1528801

follicle cells
...................................................................................................................TCTTTGGTTATCTAGCTGTATG.................................................................................................................221235258.002352585063414529824026387622227323313
...................................................................................................................TCTTTGGTTATCTAGCTGTATGA................................................................................................................231145370.001453705827724265404711794284111848195
...................................................................................................................TCTTTGGTTATCTAGCTGTAT..................................................................................................................21149365.00493652722716123607702818380295
..........................................................................................................................................................TAAAGCTAGCTTACCGAAGTT...........................................................................2117174.007174682420295268169538140
..........................................................................................................................................................TAAAGCTAGCTTACCGAAGTTA..........................................................................2217095.007095152027217697290132540
...................................................................................................................TCTTTGGTTATCTAGCTGTATT.................................................................................................................2216564.00656434496125168873440
...................................................................................................................TCTTTGGTTATCTAGCTGTATGT................................................................................................................2314531.00453123722041636410087155
....................................................................................................................CTTTGGTTATCTAGCTGTATGA................................................................................................................2214385.00438542782218273910
....................................................................................................................CTTTGGTTATCTAGCTGTATG.................................................................................................................2113455.00345532809517431010
...................................................................................................................TCTTTGGTTATCTAGCTGTA...................................................................................................................2013216.0032161175927122315963650
.........................................................................................................................................................ATAAAGCTAGCTTACCGAAGTT...........................................................................2212257.002257303234601576668370
...................................................................................................................TCTTTGGTTATCTAGCTGTATGAA...............................................................................................................2412152.002152768106848258351712
....................................................................................................................CTTTGGTTATCTAGCTGTAT..................................................................................................................2011881.00188118600015150
.........................................................................................................................................................ATAAAGCTAGCTTACCGAAGTTA..........................................................................2311623.00162342068302012546500
..........................................................................................................................................................TAAAGCTAGCTTACCGAAGTTAA.........................................................................231710.007106568148784050
...................................................................................................................TCTTTGGTTATCTAGCTGT....................................................................................................................191573.00573249125111801070
...................................................................................................................TCTTTGGTTATCTAGCTGTATGAT...............................................................................................................241547.005472053029101381305
.....................................................................................................................TTTGGTTATCTAGCTGTATG.................................................................................................................201509.00509165927361671050
...................................................................................................................TCTTTGGTTATCTAGCTGTAA..................................................................................................................211397.003971381202861500
...................................................................................................................TCTTTGGTTATCTAGCTGTATGC................................................................................................................231397.0039726592952222090
.....................................................................................................................TTTGGTTATCTAGCTGTATGA................................................................................................................211357.0035720816102171310
...................................................................................................................TCTTTGGTTATCTAGCTGTATGAAA..............................................................................................................251338.0033862115101011490
...................................................................................................................TCTTTGGTTATCTAGCTGTATGG................................................................................................................231319.003197728730221550
...................................................................................................................TCTTTGGTTATCTAGCTGTATA.................................................................................................................221291.002918333143353750
..........................................................................................................................................................TAAAGCTAGCTTACCGAAGT............................................................................201272.00272172582631570
...................................................................................................................TCTTTGGTTATCTAGCTGTAC..................................................................................................................211222.002221019430780
.........................................................................................................................................................ATAAAGCTAGCTTACCGAAG.............................................................................201190.0019012101341420
.........................................................................................................................................................ATAAAGCTAGCTTACCGAAGT............................................................................211180.001801676379690
....................................................................................................................CTTTGGTTATCTAGCTGTATGT................................................................................................................221177.00177175000020
...................................................................................................................TCTTTGGTTATCTAGCTGTATC.................................................................................................................221175.001752212156925320
.........................................................................................................................................................ATAAAGCTAGCTTACCGAAGTTAA.........................................................................241165.0016515023338770
..........................................................................................................................................................TAAAGCTAGCTTACCGAAG.............................................................................191164.001646213151370
...................................................................................................................TCTTTGGTTATCTAGCTGTAG..................................................................................................................211152.001521270725110
...................................................................................................................TCTTTGGTTATCTAGCTGTATGTT...............................................................................................................241143.001435428042370
.....................................................................................................................TTTGGTTATCTAGCTGTAT..................................................................................................................191122.001228127012200
..........................................................................................................................................................TAAAGCTAGCTTACCGAAGTTAT.........................................................................231111.00111502818780
...........................................................................................................................................................AAAGCTAGCTTACCGAAGTTA..........................................................................211100.0010089103250
...................................................................................................................TCTTTGGTTATCTAGCTGTATGAG...............................................................................................................24191.00913822416290
....................................................................................................................CTTTGGTTATCTAGCTGTA...................................................................................................................19188.008886010010
......................................................................................................................TTGGTTATCTAGCTGTATG.................................................................................................................19186.008621111124280
......................................................................................................................TTGGTTATCTAGCTGTATGA................................................................................................................20178.0078478131180
...................................................................................................................TCTTTGGTTATCTAGCTGTATGAC...............................................................................................................24173.007317133223150
...........................................................................................................................................................AAAGCTAGCTTACCGAAGTT...........................................................................20165.0065463132100
....................................................................................................................CTTTGGTTATCTAGCTGTATGAA...............................................................................................................23159.005956000300
...................................................................................................................TCTTTGGTTATCTAGCTGTATTT................................................................................................................23156.00562511314120
....................................................................................................................CTTTGGTTATCTAGCTGTATT.................................................................................................................21153.005352001000
...................................................................................................................TCTTTGGTTATCTAGCTGTT...................................................................................................................20148.0048282001080
..................................................................................................................GTCTTTGGTTATCTAGCTGTATGA................................................................................................................24136.003636000000
...................................................................................................................TCTTTGGTTATCTAGCTGTATGTA...............................................................................................................24134.0034113115130
.........................................................................................................................................................ATAAAGCTAGCTTACCGAA..............................................................................19130.003011115210
..........................................................................................................................................................TAAAGCTAGCTTACCGAAGTC...........................................................................21130.003002102070
.......................................................................................................................TGGTTATCTAGCTGTATG.................................................................................................................18126.002651022160
..................................................................................................................GTCTTTGGTTATCTAGCTGTATG.................................................................................................................23122.002222000000
...................................................................................................................TCTTTGGTTATCTAGCTGTACT.................................................................................................................22122.002210218010
...................................................................................................................TCTTTGGTTATCTAGCTG.....................................................................................................................18122.002210100380
.......................................................................................................................TGGTTATCTAGCTGTATGA................................................................................................................19121.00217211370
.....................................................................................................................TTTGGTTATCTAGCTGTATT.................................................................................................................20118.001810413000
.........................................................................................................................................................ATAAAGCTAGCTTACCGAAGTTT..........................................................................23118.00183110580
..........................................................................................................................................................TAAAGCTAGCTTACCGAAGTTT..........................................................................22118.00186000660
dp5
TC--AGATC---------GTT--------------------C----CCA----T--C----GA---T---AGAATGGTGTAATTTAAAGTTCTT--CAATCAGGGTGCTATGTTGTCTTTGGTTATCTAGCTGTATGAGTGATAAATAACGTCATAAAGCTAGCTTACCGAAGTTAATATTAGCGTCTGTCCA------------GCGAAACCG--------AAGAAACCCACGTTACGTACTGCGAGCCSizeHit CountTotal NormTotalM022

Male-body		M040

Female-body		M059

Embryo		M062

Head		V043

Embryo		V051

Head		V112

Male-body		SRR902010

Ovary		SRR902011

Testis		SRR902012

CNS imaginal disc
...................................................................................................................TCTTTGGTTATCTAGCTGTATGA................................................................................................................231169434.00169434408407753038613032284623985157146330862707
...................................................................................................................TCTTTGGTTATCTAGCTGTATG.................................................................................................................221135432.00135432125320261504113083761823601768162193727274
...................................................................................................................TCTTTGGTTATCTAGCTGTAT..................................................................................................................21196899.00968994125964839813482252044025814146254413950
...................................................................................................................TCTTTGGTTATCTAGCTGTA...................................................................................................................2016504.0065047236061173249681544143134631
..........................................................................................................................................................TAAAGCTAGCTTACCGAAGTTA..........................................................................2215353.0053533194481447180151716401350
....................................................................................................................CTTTGGTTATCTAGCTGTAT..................................................................................................................2014459.00445904415180540719
....................................................................................................................CTTTGGTTATCTAGCTGTATGA................................................................................................................2213498.00349813292261235806136
..........................................................................................................................................................TAAAGCTAGCTTACCGAAGTT...........................................................................2112941.00294119086562273024653620416
...................................................................................................................TCTTTGGTTATCTAGCTGTATGT................................................................................................................2312839.00283920116556717521868181279364
....................................................................................................................CTTTGGTTATCTAGCTGTATG.................................................................................................................2112452.00245202323204300220350
...................................................................................................................TCTTTGGTTATCTAGCTGTATT.................................................................................................................2212405.00240512929206411131037644539
.........................................................................................................................................................ATAAAGCTAGCTTACCGAAGTTA..........................................................................2311987.001987110302791152088380317
...................................................................................................................TCTTTGGTTATCTAGCTGT....................................................................................................................1911678.0016781512848681514125121100
...................................................................................................................TCTTTGGTTATCTAGCTGTATGAA...............................................................................................................2411564.0015646551123121284274044584
.........................................................................................................................................................ATAAAGCTAGCTTACCGAAGTT...........................................................................2211406.00140604534917818099920211
...................................................................................................................TCTTTGGTTATCTAGCTGTAC..................................................................................................................2111374.001374322775568140001
.....................................................................................................................TTTGGTTATCTAGCTGTATGA................................................................................................................211673.00673021321353920021333
...................................................................................................................TCTTTGGTTATCTAGCTGTAA..................................................................................................................211414.00414032704115540013
.....................................................................................................................TTTGGTTATCTAGCTGTATG.................................................................................................................201406.0040601031128478106112
.....................................................................................................................TTTGGTTATCTAGCTGTAT..................................................................................................................191346.00346024214592301151
...................................................................................................................TCTTTGGTTATCTAGCTGTATGC................................................................................................................231325.0032581215447664220111
...................................................................................................................TCTTTGGTTATCTAGCTGTATA.................................................................................................................221309.003090136441341141701133
..........................................................................................................................................................TAAAGCTAGCTTACCGAAGTTAA.........................................................................231291.00291073112176818012
....................................................................................................................CTTTGGTTATCTAGCTGTA...................................................................................................................191274.00274027300000001
...................................................................................................................TCTTTGGTTATCTAGCTGTATGAT...............................................................................................................241269.002692973201381301391
...................................................................................................................TCTTTGGTTATCTAGCTGTT...................................................................................................................201256.002565194190933005
...................................................................................................................TCTTTGGTTATCTAGCTGTATGAAA..............................................................................................................251199.001991571411562401071
...................................................................................................................TCTTTGGTTATCTAGCTGTATGG................................................................................................................231197.0019716444926956006
...........................................................................................................................................................AAAGCTAGCTTACCGAAGTTA..........................................................................211155.00155014430510002
..........................................................................................................................................................TAAAGCTAGCTTACCGAAGT............................................................................201143.0014303659721722000
...................................................................................................................TCTTTGGTTATCTAGCTGTATC.................................................................................................................221140.0014012246945310211
.........................................................................................................................................................ATAAAGCTAGCTTACCGAAGT............................................................................211134.0013405131741624001
....................................................................................................................CTTTGGTTATCTAGCTGT....................................................................................................................181126.00126012401000010
....................................................................................................................CTTTGGTTATCTAGCTGTATGT................................................................................................................221119.00119011211100031
......................................................................................................................TTGGTTATCTAGCTGTATGA................................................................................................................201104.00104038529210740
.........................................................................................................................................................ATAAAGCTAGCTTACCGAAGTTAA.........................................................................241101.00101024206454002
......................................................................................................................TTGGTTATCTAGCTGTAT..................................................................................................................18186.0086057211020419
...................................................................................................................TCTTTGGTTATCTAGCTGTATTT................................................................................................................23182.008206003356041
...................................................................................................................TCTTTGGTTATCTAGCTGTATGAC...............................................................................................................24176.007601325217100216
......................................................................................................................TTGGTTATCTAGCTGTATG.................................................................................................................19176.0076030118060030
...................................................................................................................TCTTTGGTTATCTAGCTGTATGTT...............................................................................................................24176.00762406240100210
..........................................................................................................................................................TAAAGCTAGCTTACCGAAGTC...........................................................................21174.0074006014000000
.........................................................................................................................................................ATAAAGCTAGCTTACCGAAG.............................................................................20168.006804650548000
....................................................................................................................CTTTGGTTATCTAGCTGTATT.................................................................................................................21162.006205800000013
...........................................................................................................................................................AAAGCTAGCTTACCGAAGTT...........................................................................20162.006205235200000
....................................................................................................................CTTTGGTTATCTAGCTGTATGAA...............................................................................................................23151.005105100000000
.........................................................................................................................................................ATAAAGCTAGCTTACCGAAGTC...........................................................................22146.004600424000000
..................................................................................................................GTCTTTGGTTATCTAGCTGTAT..................................................................................................................22142.004204200000000
...................................................................................................................TCTTTGGTTATCTAGCTGTATGAG...............................................................................................................24141.0041015126030014
..........................................................................................................................................................TAAAGCTAGCTTACCGAAG.............................................................................19140.004002815213000
...................................................................................................................TCTTTGGTTATCTAGCTG.....................................................................................................................18134.003461601201017
.......................................................................................................................TGGTTATCTAGCTGTATGA................................................................................................................19134.003401750300009
.....................................................................................................................TTTGGTTATCTAGCTGTATT.................................................................................................................20132.003204012510001
..................................................................................................................GTCTTTGGTTATCTAGCTGTATGA................................................................................................................24132.003203100000001
..........................................................................................................................................................TAAAGCTAGCTTACCGAAGTTT..........................................................................22129.002901810640000
..........................................................................................................................................................TAAAGCTAGCTTACCGAAGTTAT.........................................................................23124.00240521961000
...................................................................................................................TCTTTGGTTATCTAGCTGC....................................................................................................................19124.002410320000000
....................................................................................................................CTTTGGTTATCTAGCTGTAA..................................................................................................................20121.002102100000000
...................................................................................................................TCTTTGGTTATCTAGCTGTATTG................................................................................................................23121.002102101600110
.......................................................................................................................TGGTTATCTAGCTGTATG.................................................................................................................18120.002001010200007
...................................................................................................................TCTTTGGTTATCTAGCTGTAG..................................................................................................................21120.00201653311000
.....................................................................................................................TTTGGTTATCTAGCTGTA...................................................................................................................18119.00190911014003
....................................................................................................................CTTTGGTTATCTAGCTGTATGAT...............................................................................................................23119.001901401000013
...................................................................................................................TCTTTGGTTATCTAGCT......................................................................................................................17117.001700000000116
........................................................................................................................GGTTATCTAGCTGTATGA................................................................................................................18117.001701000100015
............................................................................................................................................................AAGCTAGCTTACCGAAGTTA..........................................................................20117.001701201211000
..................................................................................................................GTCTTTGGTTATCTAGCTGTATG.................................................................................................................23117.001701700000000
..........................................................................................................................................................TAAAGCTAGCTTACCGAAGTTAC.........................................................................23116.00160171610000
....................................................................................................................CTTTGGTTATCTAGCTGTT...................................................................................................................19115.001501500000000
droPer2
TC--AGATC---------GTT--------------------C----CCA----T--C----GG---T---AGAATGGTGTAATTTAAAGTTCTT--CAATCAGGGTGCTATGTTGTCTTTGGTTATCTAGCTGTATGAGTGATAAATAACGTCATAAAGCTAGCTTACCGAAGTTAATATTAGCGTCTGTCCA------------GCGAAAC----C-AA---AGAAACCCACGTTACGTACTGC----GSizeHit CountTotal NormTotalM021

Embryo		M042

Female-body		V042

Embryo		V050

Head		V057

Head		V111

Male-body
...................................................................................................................TCTTTGGTTATCTAGCTGTATG.................................................................................................................22147996.00479963602467186044197719719725
...................................................................................................................TCTTTGGTTATCTAGCTGTATGA................................................................................................................23142291.00422911652652775829339745486714
...................................................................................................................TCTTTGGTTATCTAGCTGTAT..................................................................................................................21136435.00364352794128308496792100073163
...................................................................................................................TCTTTGGTTATCTAGCTGTATGG................................................................................................................2313266.00326632217134147
...................................................................................................................TCTTTGGTTATCTAGCTGTA...................................................................................................................2012134.00213473746626237438230
..........................................................................................................................................................TAAAGCTAGCTTACCGAAGTT...........................................................................2111608.001608010258361761326
..........................................................................................................................................................TAAAGCTAGCTTACCGAAGTTA..........................................................................2211508.00150821187305343509143
....................................................................................................................CTTTGGTTATCTAGCTGTAT..................................................................................................................201961.00961293106175
...................................................................................................................TCTTTGGTTATCTAGCTGTATT.................................................................................................................221911.00911721715112936047
...................................................................................................................TCTTTGGTTATCTAGCTGTATGT................................................................................................................231810.008101771744897203111
...................................................................................................................TCTTTGGTTATCTAGCTGTATGAA...............................................................................................................241579.00579162793155129123
...................................................................................................................TCTTTGGTTATCTAGCTGT....................................................................................................................191494.00494321321011318225
....................................................................................................................CTTTGGTTATCTAGCTGTATGA................................................................................................................221471.00471644056410
.........................................................................................................................................................ATAAAGCTAGCTTACCGAAGTTA..........................................................................231388.00388851143789315
....................................................................................................................CTTTGGTTATCTAGCTGTATG.................................................................................................................211366.00366133946115
...................................................................................................................TCTTTGGTTATCTAGCTGTATGC................................................................................................................231333.0033327232113240
.........................................................................................................................................................ATAAAGCTAGCTTACCGAAGTT...........................................................................221284.00284127447310336
...................................................................................................................TCTTTGGTTATCTAGCTGTAA..................................................................................................................211218.0021811491418729
.....................................................................................................................TTTGGTTATCTAGCTGTAT..................................................................................................................191108.00108055324197
...................................................................................................................TCTTTGGTTATCTAGCTGTAC..................................................................................................................211106.0010673518181
..........................................................................................................................................................TAAAGCTAGCTTACCGAAGTTAA.........................................................................23199.00990343152711
...................................................................................................................TCTTTGGTTATCTAGCTGTATGAT...............................................................................................................24197.009734812121912
.....................................................................................................................TTTGGTTATCTAGCTGTATG.................................................................................................................20196.009601721131629
...................................................................................................................TCTTTGGTTATCTAGCTGTATGAAA..............................................................................................................25195.0095388361624
...................................................................................................................TCTTTGGTTATCTAGCTGTATA.................................................................................................................22195.00951319132615
...................................................................................................................TCTTTGGTTATCTAGCTGTATC.................................................................................................................22180.0080051017471
.....................................................................................................................TTTGGTTATCTAGCTGTATGA................................................................................................................21166.0066524941014
...................................................................................................................TCTTTGGTTATCTAGCTG.....................................................................................................................18164.00645060440
.........................................................................................................................................................ATAAAGCTAGCTTACCGAAGT............................................................................21158.0058020102917
...................................................................................................................TCTTTGGTTATCTAGCTGTATGAC...............................................................................................................24155.00553827170
..........................................................................................................................................................TAAAGCTAGCTTACCGAAGT............................................................................20149.0049142102210
...................................................................................................................TCTTTGGTTATCTAGCTGTAG..................................................................................................................21142.00422451372
...................................................................................................................TCTTTGGTTATCTAGCTGTATTT................................................................................................................23142.0042014012142
...................................................................................................................TCTTTGGTTATCTAGCTGTT...................................................................................................................20139.00391190784
...................................................................................................................TCTTTGGTTATCTAGCTGTATGTT...............................................................................................................24136.00361831365
.........................................................................................................................................................ATAAAGCTAGCTTACCGAAGTTAA.........................................................................24134.003402162104
....................................................................................................................CTTTGGTTATCTAGCTGTA...................................................................................................................19129.00290290000
....................................................................................................................CTTTGGTTATCTAGCTGTATGT................................................................................................................22122.00220200200
..........................................................................................................................................................TAAAGCTAGCTTACCGAAGTTT..........................................................................22122.0022032782
..........................................................................................................................................................TAAAGCTAGCTTACCGAAG.............................................................................19121.0021050763
...........................................................................................................................................................AAAGCTAGCTTACCGAAGTTA..........................................................................21118.00180152100
......................................................................................................................TTGGTTATCTAGCTGTATGA................................................................................................................20116.0016343015
......................................................................................................................TTGGTTATCTAGCTGTAT..................................................................................................................18115.00150110220
....................................................................................................................CTTTGGTTATCTAGCTGTATT.................................................................................................................21115.00150150000
..................................................................................................................GTCTTTGGTTATCTAGCTGTAT..................................................................................................................22113.00130130000
...................................................................................................................TCTTTGGTTATCTAGCTGTATCT................................................................................................................23111.00111000100
...........................................................................................................................................................AAAGCTAGCTTACCGAAGTT...........................................................................20111.0011054020
....................................................................................................................CTTTGGTTATCTAGCTGT....................................................................................................................18111.00110100010
......................................................................................................................TTGGTTATCTAGCTGTATG.................................................................................................................19111.0011131123
.....................................................................................................................TTTGGTTATCTAGCTGTATT.................................................................................................................20111.0011024140
.........................................................................................................................................................ATAAAGCTAGCTTACCGAAG.............................................................................20110.0010020530
...................................................................................................................TCTTTGGTTATCTAGCTGTATGAAAA.............................................................................................................26110.0010800020
...................................................................................................................TCTTTGGTTATCTAGCTGTAAA.................................................................................................................22110.0010020161
...................................................................................................................TCTTTGGTTATCTAGCTGTATGAG...............................................................................................................24110.0010220114
...................................................................................................................TCTTTGGTTATCTAGCTGTATGTA...............................................................................................................2418.008010151
..........................................................................................................................................................TAAAGCTAGCTTACCGAAGTTAT.........................................................................2317.007011032
...................................................................................................................TCTTTGGTTATCTAGCTGTATTC................................................................................................................2317.007001150
droWil2
------------------------------------------------------------------------------------------------------GGGTGCTATGTTGTCTTTGGTTATCTAGCTGTATGAGTGATACATAACGTCATAAAGCTAGCTTACCGAAGTTAATATTAGCGTCTGTTCATCAGTCATGTGAACGAAAAAG----------AAAA----------------------SizeHit CountTotal NormTotalM020

Head		M045

Female-body		V117

Male-body		V118

Embryo		V119

Head
...................................................................................................................TCTTTGGTTATCTAGCTGTATG.................................................................................................................221328196.0032819615105184811650518746490641
...................................................................................................................TCTTTGGTTATCTAGCTGTATGA................................................................................................................231199658.001996583726824072489111501918408
...................................................................................................................TCTTTGGTTATCTAGCTGTAT..................................................................................................................21132524.00325241405110386194929703168
..........................................................................................................................................................TAAAGCTAGCTTACCGAAGTTA..........................................................................22117216.001721659951152126933361
..........................................................................................................................................................TAAAGCTAGCTTACCGAAGTT...........................................................................2118937.0089372840729244313779
...................................................................................................................TCTTTGGTTATCTAGCTGTATGG................................................................................................................2316003.006003579427611561
.........................................................................................................................................................ATAAAGCTAGCTTACCGAAGTTA..........................................................................2314825.0048258250374088442
...................................................................................................................TCTTTGGTTATCTAGCTGTA...................................................................................................................2013627.0036272650572126100179
...................................................................................................................TCTTTGGTTATCTAGCTGTATGAA...............................................................................................................2413518.003518987522791487443
.........................................................................................................................................................ATAAAGCTAGCTTACCGAAGTT...........................................................................2212610.0026100145691760636
...................................................................................................................TCTTTGGTTATCTAGCTGTATGT................................................................................................................2312115.0021151168524107147169
....................................................................................................................CTTTGGTTATCTAGCTGTATGA................................................................................................................2212100.002100151892715333
....................................................................................................................CTTTGGTTATCTAGCTGTATG.................................................................................................................2111676.001676513309184148
...................................................................................................................TCTTTGGTTATCTAGCTGTATGC................................................................................................................2311346.0013461206658247
..........................................................................................................................................................TAAAGCTAGCTTACCGAAGTTAA.........................................................................2311333.00133324215833441
...................................................................................................................TCTTTGGTTATCTAGCTGTATGAAA..............................................................................................................251893.008934206715251140
...................................................................................................................TCTTTGGTTATCTAGCTGT....................................................................................................................191757.00757426193285852
....................................................................................................................CTTTGGTTATCTAGCTGTAT..................................................................................................................201752.007520749003
...................................................................................................................TCTTTGGTTATCTAGCTGTATT.................................................................................................................221582.00582115781530074
...................................................................................................................TCTTTGGTTATCTAGCTGTATC.................................................................................................................221580.005802425610106166
...................................................................................................................TCTTTGGTTATCTAGCTGTATGAT...............................................................................................................241564.005642501181111273
.....................................................................................................................TTTGGTTATCTAGCTGTATG.................................................................................................................201527.0052759227243160
...................................................................................................................TCTTTGGTTATCTAGCTGTAC..................................................................................................................211502.005024954003
...................................................................................................................TCTTTGGTTATCTAGCTGTATA.................................................................................................................221443.00443534419143184
.....................................................................................................................TTTGGTTATCTAGCTGTATGA................................................................................................................211351.0035114126617332
.........................................................................................................................................................ATAAAGCTAGCTTACCGAAGTTAA.........................................................................241331.0033119324177
..........................................................................................................................................................TAAAGCTAGCTTACCGAAG.............................................................................191256.0025629218225
...................................................................................................................TCTTTGGTTATCTAGCTGTAA..................................................................................................................211243.002435568121098
..........................................................................................................................................................TAAAGCTAGCTTACCGAAGT............................................................................201241.002410122346160
...................................................................................................................TCTTTGGTTATCTAGCTGTATGAC...............................................................................................................241218.002181011018026
...................................................................................................................TCTTTGGTTATCTAGCTG.....................................................................................................................181211.002112033014
...................................................................................................................TCTTTGGTTATCTAGCTGTATGAG...............................................................................................................241169.00169371337046
...................................................................................................................TCTTTGGTTATCTAGCTGTATGTT...............................................................................................................241131.0013197144214
.........................................................................................................................................................ATAAAGCTAGCTTACCGAAG.............................................................................201122.0012204311104
..........................................................................................................................................................TAAAGCTAGCTTACCGAAGTTAT.........................................................................231122.001220235166
...................................................................................................................TCTTTGGTTATCTAGCTGTATCC................................................................................................................231113.0011380190014
...................................................................................................................TCTTTGGTTATCTAGCTGTAG..................................................................................................................211109.001097531246
...........................................................................................................................................................AAAGCTAGCTTACCGAAGTTA..........................................................................211104.001040670298
...................................................................................................................TCTTTGGTTATCTAGCTGTT...................................................................................................................201102.001027219803
...................................................................................................................TCTTTGGTTATCTAGCTGTATCCC...............................................................................................................24196.00966870021
......................................................................................................................TTGGTTATCTAGCTGTATG.................................................................................................................19187.008713032528
......................................................................................................................TTGGTTATCTAGCTGTATGA................................................................................................................20179.00792502169
...................................................................................................................TCTTTGGTTATCTAGCTGG....................................................................................................................19167.0067660010
.........................................................................................................................................................ATAAAGCTAGCTTACCGAAGT............................................................................21166.006604121535
.....................................................................................................................TTTGGTTATCTAGCTGTAT..................................................................................................................19164.00643460114
....................................................................................................................CTTTGGTTATCTAGCTGTATGAA...............................................................................................................23155.0055054010
...........................................................................................................................................................AAAGCTAGCTTACCGAAGTT...........................................................................20154.005402811510
.......................................................................................................................TGGTTATCTAGCTGTATGA................................................................................................................19151.005102701113
...................................................................................................................TCTTTGGTTATCTAGCTGTATGAAAA.............................................................................................................26149.00492651134
...................................................................................................................TCTTTGGTTATCTAGCTGTATGTC...............................................................................................................24144.0044325106
....................................................................................................................CTTTGGTTATCTAGCTGTATGT................................................................................................................22142.0042141000
....................................................................................................................CTTTGGTTATCTAGCTGTA...................................................................................................................19139.0039039000
...................................................................................................................TCTTTGGTTATCTAGCTGTATGTA...............................................................................................................24137.0037288100
...................................................................................................................TCTTTGGTTATCTAGCTGTC...................................................................................................................20134.0034285010
...................................................................................................................TCTTTGGTTATCTAGCTGTATGTCC..............................................................................................................25131.0031196006
.......................................................................................................................TGGTTATCTAGCTGTATG.................................................................................................................18129.00290100118
.........................................................................................................................................................ATAAAGCTAGCTTACCGAAGTTAT.........................................................................24128.00280101116
......................................................................................................................TTGGTTATCTAGCTGTAT..................................................................................................................18126.0026518021
...................................................................................................................TCTTTGGTTATCTAGCTGTATGAAG..............................................................................................................25122.0022122044
...................................................................................................................TCTTTGGTTATCTAGCTGTATGCA...............................................................................................................24121.0021190011
...................................................................................................................TCTTTGGTTATCTAGCTGTATGAAC..............................................................................................................25120.0020120062
..........................................................................................................................................................TAAAGCTAGCTTACCGAAGTTC..........................................................................22120.0020070211
...................................................................................................................TCTTTGGTTATCTAGCTGC....................................................................................................................19218.0036360000
........................................................................................................................GGTTATCTAGCTGTATGA................................................................................................................18118.0018010080
...................................................................................................................TCTTTGGTTATCTAGCTGTCC..................................................................................................................21118.0018122004
..................................................................................................................GTCTTTGGTTATCTAGCTGTATGA................................................................................................................24118.0018018000
...................................................................................................................TCTTTGGTTATCTAGCTGTAAA.................................................................................................................22117.0017310103
..........................................................................................................................................................TAAAGCTAGCTTACCGAAGTTG..........................................................................22116.0016101104
..................................................................................................................GTCTTTGGTTATCTAGCTGTATG.................................................................................................................23114.0014014000
...................................................................................................................TCTTTGGTTATCTAGCTGTATGACA..............................................................................................................25114.0014120002
...................................................................................................................TCTTTGGTTATCTAGCTGTG...................................................................................................................20113.0013111010
...................................................................................................................TCTTTGGTTATCTAGCTGTATGAGT..............................................................................................................25113.001390112
..........................................................................................................................................................TAAAGCTAGCTTACCGAAGTC...........................................................................21113.001321136
............................................................................................................................................................AAGCTAGCTTACCGAAGTTA..........................................................................20112.001204062
............................................................................................................................................................AAGCTAGCTTACCGAAGTT...........................................................................19112.001203054
...................................................................................................................TCTTTGGTTATCTAGCTGTATGATC..............................................................................................................25112.001283001
....................................................................................................................CTTTGGTTATCTAGCTGT....................................................................................................................18112.0012012000
droVir3
AA-----ACGGCAGCCGCATATTAAGGCGAAACACAGCTAACG-ACCA-------------GC----------------------------CAG--GATACAGGGTGCTATGTTGTCTTTGGTTATCTAGCTGTATGAGTGATAAATAACGTCATAAAGCTAGCTTACCGAAGTTAATATTAGTGTCTGCTCA------------ACGTA-------------------CCACAGCGCGTATACT----TSizeHit CountTotal NormTotalM027

Male-body		M028

Head		M047

Female-body		M061

Embryo		SRR060654

Ovary		SRR060655

Testis		SRR060656

Ovary		SRR060657

Testis		SRR060658

Ovary		SRR060659

Testis		SRR060660

Ovary		SRR060661

Embryo		SRR060662

Embryo		SRR060663

Embryo		SRR060664

Male-body		SRR060665

Female-body		SRR060666

Male-body		SRR060667

Female-body		SRR060668

Male-body		SRR060669

Female-body		SRR060670

Testis		SRR060671

Male-body		SRR060672

Female-body		SRR060673

Ovary		SRR060674

Ovary		SRR060675

Ovary		SRR060676

Ovary		SRR060677

Ovary		SRR060678

Testis		SRR060679

Testis		SRR060680

Testis		SRR060681

Testis		SRR060682

Embryo		SRR060683

Testis		SRR060684

Embryo		SRR060685

Embryo		SRR060686

Embryo		SRR060687

Embryo		SRR060688

Ovary		SRR060689

Testis		SRR1106712

embryo_0-2h		SRR1106713

embryo_0-2h		SRR1106714

embryo_2-4h		SRR1106715

embryo_4-6h		SRR1106716

embryo_4-6h		SRR1106717

embryo_6-8h		SRR1106718

embryo_6-8h		SRR1106719

embryo_8-10h		SRR1106720

embryo_8-10h		SRR1106721

embryo_10-12h		SRR1106722

embryo_10-12h		SRR1106723

embryo_12-14h		SRR1106724

embryo_12-14h		SRR1106725

embryo_14-16h		SRR1106726

embryo_14-16h		SRR1106727

larvae		SRR1106728

larvae		SRR1106729

mixed whole adult body		SRR1106730

embryo_16-30h		V047

Embryo		V053

Head		V116

Male-body		GSM1528803

follicle cells		SRR2096013

Ovary_Strain_9_oxidized		SRR2096014

Ovary_Strain_160_oxidized		SRR2096026

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096038

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096050

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096055

Ovary_Min_43		SRR2096056

Ovary_Min_46		SRR2096057

Ovary_Min_50		SRR2096058

Ovary_Min_98		SRR2096059

Ovary_Min_164		SRR2096060

Ovary_Min_193		SRR2096061

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096072

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096079

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096080

embryo_0-2h from 15to16 day old nondysgenic mothers		SRR2096081

embryo_0-2h from 15to16 day old nondysgenic mothers
...................................................................................................................TCTTTGGTTATCTAGCTGTATG.................................................................................................................221237243.00237243128334782134821567183662056455824501133215402231800131048712875831631175320727142901131031851315313125404134121111610322539514265137161661710422996967719416433127014627619432726075107419573156493819603510730432462469106745013666342722894787710
...................................................................................................................TCTTTGGTTATCTAGCTGTATGA................................................................................................................231194084.00194084281892832547633299942894168166413632453803233345194258516998113543734323274912782821771095242116033699976197394911833935226636573141429252187633522522103797818961644106015851278775647128421287737413143282711216736935212816557523664117894017378251190612668
...................................................................................................................TCTTTGGTTATCTAGCTGTAT..................................................................................................................21193444.009344412244619147532225116215533316225294600061973830148236413068964222614833649167937917110733775874231465355319751713185546622020024314112218312320125937215038971694654011178435041791106544884922126197197199
..........................................................................................................................................................TAAAGCTAGCTTACCGAAGTTA..........................................................................22123504.002350471411901375202725192112003216190930386097452030411391207101315151092618667242041626211335635335745980532561891894133736465013523762891149559165020755228504400100000000000
.........................................................................................................................................................ATAAAGCTAGCTTACCGAAGTTA..........................................................................2318260.008260888325615515804600055341999727622815811024639345214276468145381348431321351070801114146119266194192383170291213137128867056103776113110901100000001010100
...................................................................................................................TCTTTGGTTATCTAGCTGTATGT................................................................................................................2317502.007502118405106774351337211553000222140591928139343382908538514061214043403560101839610121244751881014326192658604664410671281331961211628372950
..........................................................................................................................................................TAAAGCTAGCTTACCGAAGTT...........................................................................2116684.00668419533164616678331274001735347131346408203121483392244531643041122230138305251510004064445107985355256461849700300100001000100
...................................................................................................................TCTTTGGTTATCTAGCTGTATT.................................................................................................................2216580.00658027772169248132481136520001074117773715481188314101072310120372000011230000000000000000021337842928802000021204000463
...................................................................................................................TCTTTGGTTATCTAGCTGTA...................................................................................................................2015436.00543621969364710712709724400000946618483915512440723735710638840890000013111016102224365351886950655945453417072802950157823294417153171122131914
...................................................................................................................TCTTTGGTTATCTAGCTGTATGAA...............................................................................................................2414748.004748681675012122112528054100129012443157553817317279238103208328137361117681616612540001434313911138146146041672542572301010211013501118252520
...................................................................................................................TCTTTGGTTATCTAGCTGTATGG................................................................................................................2312963.00296370620333650051304000000000040000000471608010001200000210314322330041591901001112202010000
.........................................................................................................................................................ATAAAGCTAGCTTACCGAAGTT...........................................................................2212434.002434214521240202362330000161743684964419828702252678827683215112903400013971142012198274343165217535404300100000001001
....................................................................................................................CTTTGGTTATCTAGCTGTATGA................................................................................................................2212194.002194032050380302020000430000304000204155120200020800000010100010100011141000001000000001000
....................................................................................................................CTTTGGTTATCTAGCTGTATG.................................................................................................................2111671.0016710015651403000500002002205010000029020400000600000000000000000001282900000000000000000
...................................................................................................................TCTTTGGTTATCTAGCTGTATGAT...............................................................................................................2411436.0014363785177812230100270000432113291264165713020361074092052021107801210311266796578323219177010408332253512689
...................................................................................................................TCTTTGGTTATCTAGCTGT....................................................................................................................1911305.0013054310326460771262500004326142821735152962040316531520700100265000001101001300513041564600120000111600222
....................................................................................................................CTTTGGTTATCTAGCTGTAT..................................................................................................................2011184.001184001111000000000003303620270000221851102000002000000000000000000002300000000000000000
..........................................................................................................................................................TAAAGCTAGCTTACCGAAGTTAA.........................................................................231890.00890013020107030000122541884493176299020123872277403000105000011210011220110321322401100000000000000
...................................................................................................................TCTTTGGTTATCTAGCTGTATGAAA..............................................................................................................251660.00660317761140122201130003913215541434400141131882301201410180000010121122651213164250000344431263298118
...................................................................................................................TCTTTGGTTATCTAGCTGTATGC................................................................................................................231627.006279763163124221400001022221381310010251502800001510010138273116285342756441200000000000000100
...................................................................................................................TCTTTGGTTATCTAGCTGTAC..................................................................................................................211617.006175325352450200000000350010803000001312030000050000000000000000001115700000000000000000
...................................................................................................................TCTTTGGTTATCTAGCTGTAA..................................................................................................................211433.004332538430732190000231857523317000001225709000001200000000000000000001993300000000222000000
...................................................................................................................TCTTTGGTTATCTAGCTGTATGTT...............................................................................................................241420.004202511459140500030000121436511021410000115310011000011100000110111110011121283100000001200211010
.....................................................................................................................TTTGGTTATCTAGCTGTATG.................................................................................................................201395.0039503962101070280000031112192400000993100280000131000000000000000000135304800000000000001000
...................................................................................................................TCTTTGGTTATCTAGCTGTATA.................................................................................................................221360.00360321487416032150000125631071200000442905001006000001001021001110133304200000100000000040
.........................................................................................................................................................ATAAAGCTAGCTTACCGAAGTTAA.........................................................................241306.0030600151010802000038176211514523360010114242181100260000010000100000000016111400000000000000000
.....................................................................................................................TTTGGTTATCTAGCTGTATGA................................................................................................................211292.0029220122290407260000320143204010106861206000105000000010001000110213122100000200000010000
...................................................................................................................TCTTTGGTTATCTAGCTGTATC.................................................................................................................221292.00292325733021304000074032220071000041012040000010000000000000000000029802701000000000000000
.........................................................................................................................................................ATAAAGCTAGCTTACCGAAGT............................................................................211288.00288012560112050000181191813821412000108931209000001000000001001020010000315400000000000000000
..........................................................................................................................................................TAAAGCTAGCTTACCGAAGT............................................................................201282.00282011315050209000029138131210330140210079250700000300010001101200002102223600000000000000000
...................................................................................................................TCTTTGGTTATCTAGCTG.....................................................................................................................181216.00216236583140403200012004022390000051651801010003001000000121100024130000000101012000010
...................................................................................................................TCTTTGGTTATCTAGCTGTATTT................................................................................................................231193.0019310260000103000013532165136291001004120140000060000000000000000000719300000003000000000
...........................................................................................................................................................AAAGCTAGCTTACCGAAGTTA..........................................................................211166.00166001151000000000074115002100000365300001100000000000011001100112200000000000000000
...................................................................................................................TCTTTGGTTATCTAGCTGTATGAC...............................................................................................................241165.001654309370302020000000200312000001334020000010001021041232510103104400010200202000131
.....................................................................................................................TTTGGTTATCTAGCTGTAT..................................................................................................................191152.001520270112010000003742212140000033413060000130000000000000000000111300001000000000000
...................................................................................................................TCTTTGGTTATCTAGCTGTT...................................................................................................................201133.0013363931103000000001220113210000001030100000400000000000000000000191100000000010000000
...................................................................................................................TCTTTGGTTATCTAGC.......................................................................................................................161129.001290000000000000000000000000000000000000000000003391210172791210522800000000000000000000
...................................................................................................................TCTTTGGTTATCTAGCTGTAG..................................................................................................................211114.00114165053010000000018000070001000131301000003000000000000000000016200000000000000100
.........................................................................................................................................................ATAAAGCTAGCTTACCGAAG.............................................................................201109.001090013000040300005506350860000043140000000000000000000000000001271100000000000000000
......................................................................................................................TTGGTTATCTAGCTGTATGA................................................................................................................201103.0010302407070000000001010040400000222807000103000000000000000000023300300000001000000
......................................................................................................................TTGGTTATCTAGCTGTATG.................................................................................................................191100.00100003830610000000011000111200000303803000009000000000000000100004400000000000010000
...................................................................................................................TCTTTGGTTATCTAGCTGTATGAG...............................................................................................................24194.00942181550200000000100100101000101405010100020000000000000000000913800000000020000001
....................................................................................................................CTTTGGTTATCTAGCTGTATGT................................................................................................................22194.009400921000000000000000000000000010000000000000000000000000000000000000000000000000
..........................................................................................................................................................TAAAGCTAGCTTACCGAAGTTAT.........................................................................23190.0090004000000100008831226051200000153301000001000001000001200000043400000000000000000
.......................................................................................................................TGGTTATCTAGCTGTATG.................................................................................................................18182.00820022002000000003124018030010011703010000004000000000000000000000000000000000000000
..........................................................................................................................................................TAAAGCTAGCTTACCGAAGTTT..........................................................................22178.0078017100000000009121041071100000242401000001000001000010000000006200000000000000000
.......................................................................................................................TGGTTATCTAGCTGTATGA................................................................................................................19177.0077001900801000000330200303000102113217000003000000000000000000001000010100001000001
......................................................................................................................TTGGTTATCTAGCTGTAT..................................................................................................................18168.006801350051000000004110000200010013504000003000000000000000000000100000000000000000
..........................................................................................................................................................TAAAGCTAGCTTACCGAAG.............................................................................19167.006700511303010000322325176000000120010000020000000000000000100015000000000000000000
....................................................................................................................CTTTGGTTATCTAGCTGTA...................................................................................................................19161.006100600000000000000000000000000010000000000000000000000000000000000000000000000000
...........................................................................................................................................................AAAGCTAGCTTACCGAAGTT...........................................................................20161.006100400000001000040022102200000220100000000000000000000000000002000000000000000000
.........................................................................................................................................................ATAAAGCTAGCTTACCGAAGTTT..........................................................................23158.00580050000000000072263514600000030303000001000000000000000000003400000000000000000
.........................................................................................................................................................ATAAAGCTAGCTTACCGAAGTTAT.........................................................................24151.00510030000001000071292325000110030400001000000000000000010000013100000000000000000
...................................................................................................................TCTTTGGTTATCTAGCTGTATGTA...............................................................................................................24150.005031081021000000000110001200000010201000001000000000000011000005400000010000000201
...................................................................................................................TCTTTGGTTATCTAGCTGG....................................................................................................................19146.004673900000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................CTTTGGTTATCTAGCTGTATGAA...............................................................................................................23144.004400400000000000000000000200000010000000000000000000000000000001000000000000000000
...................................................................................................................TCTTTGGTTATCTAGCTGTATGAAAA.............................................................................................................26143.00433720000000000041210000500000212100004000000000000000000000001300000010000001101
...................................................................................................................TCTTTGGTTATCTAGCTGTATGATC..............................................................................................................25137.00371519000000000000000000000000000000000000000003003023121001500000000000000000000
..........................................................................................................................................GTGATAAATAACGTC.................................................................................................15137.00370000000000000000000000000000000000000000000334258210113000400000000000000000000
...................................................................................................................TCTTTGGTTATCTAGCTGTAAT.................................................................................................................22134.003401100000000000000010300000000000000000000000000000000000000422200000000000000000
...................................................................................................................TCTTTGGTTATCTAGCTGTATTC................................................................................................................23132.0032010101000000001100001000000000000100000000000000000000000001410100000000000000000
...................................................................................................................TCTTTGGTTATCTAGCTGC....................................................................................................................19132.003242401000000000000000010000000000000000000000000000000000000001000000001000000000
..........................................................................................................................................................TAAAGCTAGCTTACCGAAGTTC..........................................................................22131.00310001010200000020110317300000000100000002000000001000000000014000000000000000000
...................................................................................................................TCTTTGGTTATCTAGCTGTACT.................................................................................................................22130.003000000000010000010000170000000000001000000000000000000000000081100000000000000000
........................................................................................................................GGTTATCTAGCTGTATGA................................................................................................................18129.002900131010000000000100000200000111201100002000000000000000000001000010000000000000
...................................................................................................................TCTTTGGTTATCTAGCTGTATCC................................................................................................................23126.002612110000000000000000000000000000000000000000000000000000000002100000000000000000
..................................................................................................................GTCTTTGGTTATCTAGCTGTATG.................................................................................................................23126.002600260000000000000000000000000000000000000000000000000000000000000000000000000000
droMoj3
AGTCAAAGC------------------------------------------------GACAGC---C---A-----ATGGG-----------AA--TATACAGGGTGCTATGTTGTCTTTGGTTATCTAGCTGTATGAGTGATAAATAACGTCATAAAGCTAGCTTACCGAAGTTAATATTAGTGTCTGCTCA------------GCGTAACAA----------------CACAGTGCGTATACT----TSizeHit CountTotal NormTotalM046

Female-body		V041

Embryo		V049

Head		V056

Head		M060

Embryo		V110

Male-body
...................................................................................................................TCTTTGGTTATCTAGCTGTATGA................................................................................................................231600396.0060039642805391914520649749237915004
...................................................................................................................TCTTTGGTTATCTAGCTGTATG.................................................................................................................221363672.00363672321387466684791112120448232786
...................................................................................................................TCTTTGGTTATCTAGCTGTAT..................................................................................................................21188888.008888853252124738075387181807015
...................................................................................................................TCTTTGGTTATCTAGCTGTA...................................................................................................................20115626.001562617351816923313064407
..........................................................................................................................................................TAAAGCTAGCTTACCGAAGTTA..........................................................................22113858.0013858238117921434228809311
..........................................................................................................................................................TAAAGCTAGCTTACCGAAGTT...........................................................................2119095.0090957483732665806569559
...................................................................................................................TCTTTGGTTATCTAGCTGTATGT................................................................................................................2317091.0070919092211492065322284
.........................................................................................................................................................ATAAAGCTAGCTTACCGAAGTT...........................................................................2216258.006258464176871655111255
.........................................................................................................................................................ATAAAGCTAGCTTACCGAAGTTA..........................................................................2315264.0052642139438441362372135
....................................................................................................................CTTTGGTTATCTAGCTGTATGA................................................................................................................2214524.00452433692566109721
....................................................................................................................CTTTGGTTATCTAGCTGTAT..................................................................................................................2013846.0038463817125156
...................................................................................................................TCTTTGGTTATCTAGCTGTATGAA...............................................................................................................2413741.0037417302221111912246241
...................................................................................................................TCTTTGGTTATCTAGCTGTATT.................................................................................................................2213504.003504248158712272859067
....................................................................................................................CTTTGGTTATCTAGCTGTATG.................................................................................................................2113041.00304124224271154613
...................................................................................................................TCTTTGGTTATCTAGCTGTATC.................................................................................................................2212536.002536107395233343283509
...................................................................................................................TCTTTGGTTATCTAGCTGTAC..................................................................................................................2112353.0023531203723256
...................................................................................................................TCTTTGGTTATCTAGCTGTATGAT...............................................................................................................2412053.00205326810130611479114
...................................................................................................................TCTTTGGTTATCTAGCTGTATGC................................................................................................................2312030.002030208120731011416112
.....................................................................................................................TTTGGTTATCTAGCTGTATGA................................................................................................................2111038.0010381708251674817
...................................................................................................................TCTTTGGTTATCTAGCTGTATGG................................................................................................................231953.009534584121478018
...................................................................................................................TCTTTGGTTATCTAGCTGT....................................................................................................................191856.008565436676942129
...................................................................................................................TCTTTGGTTATCTAGCTGTATA.................................................................................................................221795.007956449251862118
..........................................................................................................................................................TAAAGCTAGCTTACCGAAGT............................................................................201676.0067635392956238
.....................................................................................................................TTTGGTTATCTAGCTGTATG.................................................................................................................201654.0065499192182129133
..........................................................................................................................................................TAAAGCTAGCTTACCGAAGTTAA.........................................................................231493.00493632942179324
...................................................................................................................TCTTTGGTTATCTAGCTGTATGAC...............................................................................................................241430.004302646223486
..........................................................................................................................................................TAAAGCTAGCTTACCGAAGTC...........................................................................211373.0037310013710
......................................................................................................................TTGGTTATCTAGCTGTATGA................................................................................................................201349.003493210022969
...................................................................................................................TCTTTGGTTATCTAGCTGTAA..................................................................................................................211339.00339156042613644
...................................................................................................................TCTTTGGTTATCTAGCTGTATGAAA..............................................................................................................251323.003237136194310747
.........................................................................................................................................................ATAAAGCTAGCTTACCGAAGTC...........................................................................221317.0031711003123
.........................................................................................................................................................ATAAAGCTAGCTTACCGAAGT............................................................................211291.00291231122020629
...........................................................................................................................................................AAAGCTAGCTTACCGAAGTTA..........................................................................211274.00274180300901
......................................................................................................................TTGGTTATCTAGCTGTATG.................................................................................................................191224.0022419291015817
.....................................................................................................................TTTGGTTATCTAGCTGTAT..................................................................................................................191218.00218170312111210
...................................................................................................................TCTTTGGTTATCTAGCTGTATGTC...............................................................................................................241145.001452409244048
...........................................................................................................................................................AAAGCTAGCTTACCGAAGTT...........................................................................201133.0013346100842
...................................................................................................................TCTTTGGTTATCTAGCTGTATGTT...............................................................................................................241132.00132155568516
....................................................................................................................CTTTGGTTATCTAGCTGTA...................................................................................................................191122.00122109000130
.......................................................................................................................TGGTTATCTAGCTGTATGA................................................................................................................191121.00121144001030
...................................................................................................................TCTTTGGTTATCTAGCTGTATCC................................................................................................................231112.00112605816122
...................................................................................................................TCTTTGGTTATCTAGCTGTT...................................................................................................................201111.001113803143818
...................................................................................................................TCTTTGGTTATCTAGCTGTATGAG...............................................................................................................241100.001001722134710
.........................................................................................................................................................ATAAAGCTAGCTTACCGAAGTTAA.........................................................................24197.00971938271714
........................................................................................................................................................CATAAAGCTAGCTTACCGAAGTT...........................................................................23191.00913000880
....................................................................................................................CTTTGGTTATCTAGCTGTATGT................................................................................................................22190.009078001110
....................................................................................................................CTTTGGTTATCTAGCTGTATC.................................................................................................................21172.00727200000
......................................................................................................................TTGGTTATCTAGCTGTAT..................................................................................................................18169.006952011132
...................................................................................................................TCTTTGGTTATCTAGCTG.....................................................................................................................18168.006811272433
..........................................................................................................................................................TAAAGCTAGCTTACCGAAGC............................................................................20166.00660000660
........................................................................................................................GGTTATCTAGCTGTATGA................................................................................................................18164.00646100570
.......................................................................................................................TGGTTATCTAGCTGTATG.................................................................................................................18162.006216800380
....................................................................................................................CTTTGGTTATCTAGCTGTATGAA...............................................................................................................23158.00585200060
...................................................................................................................TCTTTGGTTATCTAGCTGTATTT................................................................................................................23153.005319911644
..........................................................................................................................................................TAAAGCTAGCTTACCGAAGTTAT.........................................................................23152.005212912136
.....................................................................................................................TTTGGTTATCTAGCTGTATT.................................................................................................................20151.005113612200
.........................................................................................................................................................ATAAAGCTAGCTTACCGAAG.............................................................................20149.00498342824
............................................................................................................................................................AAGCTAGCTTACCGAAGTTA..........................................................................20147.004712400310
...................................................................................................................TCTTTGGTTATCTAGCTGTAG..................................................................................................................21145.00456823224
...................................................................................................................TCTTTGGTTATCTAGCTGTATTC................................................................................................................23143.0043414111013
..........................................................................................................................................................TAAAGCTAGCTTACCGAAGTTC..........................................................................22141.00414461233
.........................................................................................................................................................ATAAAGCTAGCTTACCGAAGTTT..........................................................................23140.00401701895
droGri2
CG-----A------------------------------------G-CAACAAGC--AGAAAGCAAAT---AGGATTGTGCAAGTT--TGTGCCG--CATACAGGGTGCTATGTTGTCTTTGGTTATCTAGCTGTATGAGTGATAAATAACGTCATAAAGCTAGCTTACCGAAGTTAATATTAGTGTCTCTTCA------------ACGTAAC-------------------ACGGCGCGTATACG----CSizeHit CountTotal NormTotalM041

Female-body		V109

Male-body
...................................................................................................................TCTTTGGTTATCTAGCTGTATG.................................................................................................................22134668.00346681636218306
...................................................................................................................TCTTTGGTTATCTAGCTGTATGA................................................................................................................23126934.0026934206466288
...................................................................................................................TCTTTGGTTATCTAGCTGTAT..................................................................................................................21125994.0025994212524742
....................................................................................................................CTTTGGTTATCTAGCTGTATGA................................................................................................................2211650.00165016455
....................................................................................................................CTTTGGTTATCTAGCTGTAT..................................................................................................................2011593.00159315903
....................................................................................................................CTTTGGTTATCTAGCTGTATG.................................................................................................................2111320.001320129822
...................................................................................................................TCTTTGGTTATCTAGCTGTA...................................................................................................................2011180.001180934246
..........................................................................................................................................................TAAAGCTAGCTTACCGAAGTTA..........................................................................2211100.001100943157
..........................................................................................................................................................TAAAGCTAGCTTACCGAAGTT...........................................................................211773.00773530243
...................................................................................................................TCTTTGGTTATCTAGCTGTATGT................................................................................................................231604.00604435169
...................................................................................................................TCTTTGGTTATCTAGCTGTATGAA...............................................................................................................241454.0045437579
.........................................................................................................................................................ATAAAGCTAGCTTACCGAAGTTA..........................................................................231362.0036230557
...................................................................................................................TCTTTGGTTATCTAGCTGT....................................................................................................................191345.0034525194
.........................................................................................................................................................ATAAAGCTAGCTTACCGAAGTT...........................................................................221245.0024515986
...................................................................................................................TCTTTGGTTATCTAGCTGTATGAT...............................................................................................................241231.0023117853
...................................................................................................................TCTTTGGTTATCTAGCTGTATT.................................................................................................................221221.0022118041
.....................................................................................................................TTTGGTTATCTAGCTGTATGA................................................................................................................21189.0089809
...........................................................................................................................................................AAAGCTAGCTTACCGAAGTTA..........................................................................21188.0088871
.....................................................................................................................TTTGGTTATCTAGCTGTAT..................................................................................................................19185.0085805
.....................................................................................................................TTTGGTTATCTAGCTGTATG.................................................................................................................20184.00846420
...................................................................................................................TCTTTGGTTATCTAGCTGTATGC................................................................................................................23181.00811566
...................................................................................................................TCTTTGGTTATCTAGCTGTATGG................................................................................................................23173.00733241
....................................................................................................................CTTTGGTTATCTAGCTGTA...................................................................................................................19170.0070700
.........................................................................................................................................................ATAAAGCTAGCTTACCGAAGT............................................................................21149.00492524
....................................................................................................................CTTTGGTTATCTAGCTGTATGT................................................................................................................22147.0047461
..........................................................................................................................................................TAAAGCTAGCTTACCGAAGT............................................................................20147.00473116
...................................................................................................................TCTTTGGTTATCTAGCTGTATA.................................................................................................................22145.00453015
...........................................................................................................................................................AAAGCTAGCTTACCGAAGTT...........................................................................20140.0040400
....................................................................................................................CTTTGGTTATCTAGCTGTATGAA...............................................................................................................23135.0035350
...................................................................................................................TCTTTGGTTATCTAGCTGTATGTT...............................................................................................................24128.00281810
......................................................................................................................TTGGTTATCTAGCTGTAT..................................................................................................................18125.0025241
...................................................................................................................TCTTTGGTTATCTAGCTG.....................................................................................................................18125.0025250
...................................................................................................................TCTTTGGTTATCTAGCTGTATGAAA..............................................................................................................25125.00251510
...................................................................................................................TCTTTGGTTATCTAGCTGTAA..................................................................................................................21124.0024195
...................................................................................................................TCTTTGGTTATCTAGCTGTATC.................................................................................................................22122.0022814
...................................................................................................................TCTTTGGTTATCTAGCTGTATGAG...............................................................................................................24121.0021183
......................................................................................................................TTGGTTATCTAGCTGTATG.................................................................................................................19119.0019163
..........................................................................................................................................................TAAAGCTAGCTTACCGAAGTTAA.........................................................................23119.0019145
......................................................................................................................TTGGTTATCTAGCTGTATGA................................................................................................................20118.0018171
...................................................................................................................TCTTTGGTTATCTAGCTGTT...................................................................................................................20117.0017116
..................................................................................................................GTCTTTGGTTATCTAGCTGTAT..................................................................................................................22115.0015150
.........................................................................................................................................................ATAAAGCTAGCTTACCGAAG.............................................................................20114.0014104
....................................................................................................................CTTTGGTTATCTAGCTGTATGAT...............................................................................................................23113.0013130
...................................................................................................................TCTTTGGTTATCTAGCTGTATTT................................................................................................................23112.001275
..................................................................................................................GTCTTTGGTTATCTAGCTGTATGA................................................................................................................24112.0012120
....................................................................................................................CTTTGGTTATCTAGCTGT....................................................................................................................18112.0012120
....................................................................................................................CTTTGGTTATCTAGCTGTATT.................................................................................................................21111.0011110
..........................................................................................................................................................TAAAGCTAGCTTACCGAAG.............................................................................19110.001073
.......................................................................................................................TGGTTATCTAGCTGTATGA................................................................................................................19110.001091
.........................................................................................................................................................ATAAAGCTAGCTTACCGAAGTTAA.........................................................................2419.00963
...................................................................................................................TCTTTGGTTATCTAGCTGTAC..................................................................................................................2118.00853
...................................................................................................................TCTTTGGTTATCTAGCTGTATTG................................................................................................................2318.00880
..........................................................................................................................................................TAAAGCTAGCTTACCGAAGTTT..........................................................................2217.00770
.......................................................................................................................TGGTTATCTAGCTGTATG.................................................................................................................1817.00770
..........................................................................................................................................................TAAAGCTAGCTTACCGAAGTTAT.........................................................................2316.00633
..................................................................................................................GTCTTTGGTTATCTAGCTGTATG.................................................................................................................2316.00660
...................................................................................................................TCTTTGGTTATCTAGCTGTATGTA...............................................................................................................2416.00633
...................................................................................................................TCTTTGGTTATCTAGCTGTATGAC...............................................................................................................2416.00660
.........................................................................................................................................................ATAAAGCTAGCTTACCGAAGTTAT.........................................................................2415.00541
...................................................................................................................TCTTTGGTTATCTAGCTGTATGGC...............................................................................................................2414.00440
........................................................................................................................GGTTATCTAGCTGTATGA................................................................................................................1814.00440
.....................................................................................................................TTTGGTTATCTAGCTGTATGT................................................................................................................2113.00330
...................................................................................................................TCTTTGGTTATCTAGCTGTATGGCA..............................................................................................................2513.00330
.............................................................................................................................................................AGCTAGCTTACCGAAGTTA..........................................................................1913.00330
...................................................................................................................TCTTTGGTTATCTAGCTGTATTC................................................................................................................2313.00330
....................................................................................................................CTTTGGTTATCTAGCTGTATGAG...............................................................................................................2313.00330
.........................................................................................................................................................ATAAAGCTAGCTTACCGAAGTTT..........................................................................2313.00330
............................................................................................................................................................AAGCTAGCTTACCGAAGTTA..........................................................................2013.00330
...................................................................................................................TCTTTGGTTATCTAGCTGTATGAAC..............................................................................................................2513.00330
....................................................................................................................CTTTGGTTATCTAGCTGTATA.................................................................................................................2113.00330
...................................................................................................................TCTTTGGTTATCTAGCTGTATGGCC..............................................................................................................2513.00330
...................................................................................................................TCTTTGGTTATCTAGCTGTAAA.................................................................................................................2212.00220
....................................................................................................................CTTTGGTTATCTAGCTGTATGG................................................................................................................2212.00220
...................................................................................................................TCTTTGGTTATCTAGCTGTATGCT...............................................................................................................2412.00220
.....................................................................................................................TTTGGTTATCTAGCTGTA...................................................................................................................1812.00220
....................................................................................................................CTTTGGTTATCTAGCTGTATGAAA..............................................................................................................2412.00211
....................................................................................................................CTTTGGTTATCTAGCTGTAA..................................................................................................................2012.00220
...................................................................................................................TCTTTGGTTATCTAGCTGTATGCC...............................................................................................................2412.00220
........................................................................................................................................................CATAAAGCTAGCTTACCGAAGTT...........................................................................2312.00220
...................................................................................................................TCTTTGGTTATCTAGCTGTATGAGG..............................................................................................................2512.00220
...................................................................................................................TCTTTGGTTATCTAGCTGTATGAGA..............................................................................................................2512.00220
....................................................................................................................CTTTGGTTATCTAGCTGTT...................................................................................................................1912.00220
....................................................................................................................CTTTGGTTATCTAGCTGTATGTT...............................................................................................................2312.00220
...................................................................................................................TCTTTGGTTATCTAGCTGTATAT................................................................................................................2312.00220
...................................................................................................................TCTTTGGTTATCTAGCTGTATGAAAT.............................................................................................................2612.00220
...................................................................................................................TCTTTGGTTATCTAGCTGTATGAAG..............................................................................................................2512.00220
...................................................................................................................TCTTTGGTTATCTAGCTGTAG..................................................................................................................2112.00211
....................................................................................................................CTTTGGTTATCTAGCTGTATC.................................................................................................................2112.00220
............................................................................................................................................................AAGCTAGCTTACCGAAGTT...........................................................................1912.00220
...................................................................................................................TCTTTGGTTATCTAGCTGTATCG................................................................................................................2312.00220

Generated: 10/20/2015 at 07:44 PM