ID:

dan-mir-87

 Coordinate:

scaffold_12916:13789778-13789869 -

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

3pUTR

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-32.6 -32.6 -32.5

Flybase annnotation

utr3 [utr3_minus_970]; pre_miRNA [Dana\mir-87-RM]; miRNA [Dana\miR-87-RA]

No Repeatable elements found

Sense Strand Reads

TAGTGCTAGTGAAGCATAGATTCTGGATTTAAGTGAATCCTTTCAAGCGGCATATTTCATTCGCGCCTGTATCTTGCTGAACCGTTACCGATATGGCACAGAATCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATTTGTTAAGCAATCTTCAAAAGATAGTTTGGAATACAATCGAGATCTTTGAGTCCT

*********************************************.((((((.(((((...((((((((.((.(((((.(((((.....................))))).))))).))..))))))))...))))).))))..)).********************************************* 		Read size # Mismatch Hit Count Total Norm Total V106

head

 V105

male body		 M044

female body

 M058

embryo

 V055

head

 V039

embryo
............................................................................................................TTGAGCAAAATTTCAGGTGTGTGA............................................................ 24 0 1 7304.00 7304 2992 2367 700 520 321 404
............................................................................................................TTGAGCAAAATTTCAGGTGTGTG............................................................. 23 0 1 3217.00 3217 1496 1094 256 101 123 147
............................................................................................................TTGAGCAAAATTTCAGGTGTGT.............................................................. 22 0 1 2325.00 2325 980 898 236 21 186 4
.............................................................................................................TGAGCAAAATTTCAGGTGTGTGA............................................................ 23 0 1 757.00 757 389 126 106 59 29 48
............................................................................................................TTGAGCAAAATTTCAGGTGTGTGT............................................................ 24 1 1 653.00 653 331 252 30 8 27 5
............................................................................................................TTGAGCAAAATTTCAGGTGTG............................................................... 21 0 1 584.00 584 292 170 75 13 30 4
.............................................................................................................TGAGCAAAATTTCAGGTGTGTG............................................................. 22 0 1 302.00 302 178 56 36 6 12 14
.............................................................................................................TGAGCAAAATTTCAGGTGTGT.............................................................. 21 0 1 129.00 129 71 34 15 0 9 0
............................................................................................................TTGAGCAAAATTTCAGGTGT................................................................ 20 0 1 124.00 124 68 39 4 1 9 3
............................................................................................................TTTAGCAAAATTTCAGGTGTGTGA............................................................ 24 1 1 76.00 76 66 9 0 0 0 1
............................................................................................................TGGAGCAAAATTTCAGGTGTGTGA............................................................ 24 1 1 68.00 68 0 4 0 60 4 0
............................................................................................................TTGAGCAAAATTTCAGGTGTGTGAA........................................................... 25 1 1 62.00 62 14 18 16 11 1 2
.............................................................................................................TGAGCAAAATTTCAGGTGTGTGT............................................................ 23 1 1 58.00 58 32 14 6 0 6 0
............................................................TCGCGCCTGTATCTTGCTGAACC............................................................................................................. 23 0 1 58.00 58 1 0 29 27 1 0
............................................................TCGCGCCTGTATCTTGCTGAAC.............................................................................................................. 22 0 1 57.00 57 2 1 39 11 4 0
............................................................................................................TTGAGCAAAATTTCAGGTGTATGA............................................................ 24 1 1 53.00 53 25 28 0 0 0 0
............................................................................................................TTGAGAAAAATTTCAGGTGTGTGA............................................................ 24 1 1 45.00 45 31 14 0 0 0 0
............................................................................................................TTGAGCAAAATTTCAGGTGTGTTA............................................................ 24 1 1 44.00 44 15 7 0 1 0 21
............................................................................................................TTGAGCAAAATTTCAGGTGTGTGAT........................................................... 25 1 1 42.00 42 13 14 7 3 3 2
............................................................................................................TTTAGCAAAATTTCAGGTGTGT.............................................................. 22 1 1 35.00 35 30 5 0 0 0 0
............................................................................................................TTGAGCAAAATTTCAGGTGTGTT............................................................. 23 1 1 34.00 34 13 10 3 1 2 5
............................................................................................................TTGAGCAAAATTTCATGTGTGTGA............................................................ 24 1 1 33.00 33 18 8 0 0 0 7
............................................................................................................TTTAGCAAAATTTCAGGTGTGTG............................................................. 23 1 1 31.00 31 26 4 0 0 0 1
.............................................................................................................TTAGCAAAATTTCAGGTGTGTGA............................................................ 23 1 1 30.00 30 10 0 0 20 0 0
............................................................................................................TTCAGCAAAATTTCAGGTGTGTGA............................................................ 24 1 1 29.00 29 4 1 0 23 1 0
............................................................................................................TTGAGCAAAATTTCAGGTGTCTGA............................................................ 24 1 1 28.00 28 10 18 0 0 0 0
.............................................................................................................TGAGCAAAATTTCAGGTGTGTGAA........................................................... 24 1 1 28.00 28 6 9 10 3 0 0
............................................................................................................TTGATCAAAATTTCAGGTGTGTGA............................................................ 24 1 1 26.00 26 14 8 2 0 1 1
............................................................................................................TTGTGCAAAATTTCAGGTGTGTGA............................................................ 24 1 1 26.00 26 0 0 0 26 0 0
.............................................................................................................TGAGCAAAATTTCAGGTGTG............................................................... 20 0 1 25.00 25 15 4 5 1 0 0
............................................................................................................TTGAGCAAGATTTCAGGTGTGTGA............................................................ 24 1 1 24.00 24 2 2 20 0 0 0
............................................................................................................TTGAGCAAAATTTCAGGTGTGTGG............................................................ 24 1 1 22.00 22 6 7 6 0 0 3
............................................................................................................TGGAGCAAAATTTCAGGTGTGTG............................................................. 23 1 1 20.00 20 1 5 0 14 0 0
............................................................................................................TTGAGCAAAATTTCAGGTGTGTGC............................................................ 24 1 1 19.00 19 2 9 1 2 4 1
............................................................................................................TTGAGCAAAATTTCAGGTGTAT.............................................................. 22 1 1 18.00 18 10 7 0 0 1 0
............................................................................................................TTGAGCAAAATTTCATGTGTGTG............................................................. 23 1 1 18.00 18 12 5 0 0 0 1
............................................................................................................TTGAGAAAAATTTCAGGTGTGTG............................................................. 23 1 1 18.00 18 12 6 0 0 0 0
............................................................................................................TTGAGCAAAATTTCAGGTGTTTGA............................................................ 24 1 1 17.00 17 8 4 0 1 0 4
............................................................................................................TTGAGCAAAATTTCAGGTGTATG............................................................. 23 1 1 17.00 17 8 8 0 0 0 1
............................................................................................................TTGAGCAAAATTTCAGGTGCGTGA............................................................ 24 1 1 15.00 15 7 1 1 0 5 1
............................................................................................................TTGAGCAAAATTTCAGTTGTGTGA............................................................ 24 1 1 15.00 15 2 3 2 2 1 5
............................................................................................................TTGAGCAAAATTTCAGGTGTGTGTT........................................................... 25 2 1 15.00 15 6 7 1 0 1 0
............................................................................................................TTGAGCAAAATTTCAAGTGTGTGA............................................................ 24 1 1 14.00 14 1 10 0 1 0 2
............................................................................................................TTGAGAAAAATTTCAGGTGTGT.............................................................. 22 1 1 14.00 14 7 4 0 0 3 0
............................................................................................................TTGAGCAAAATTTCAGGTGTGCGA............................................................ 24 1 1 14.00 14 6 3 3 1 0 1
............................................................................................................TTGAGCAAAATTTCAGGTGTCT.............................................................. 22 1 1 13.00 13 7 6 0 0 0 0
............................................................................................................TTGAGCAAAATTTCAGGCGTGTGA............................................................ 24 1 1 13.00 13 4 2 0 1 0 6
............................................................................................................TTTAGCAAAATTTCAGGTGTGTGT............................................................ 24 2 1 13.00 13 12 1 0 0 0 0
............................................................................................................TTGAGCAAAATTTCAGGTGTGA.............................................................. 22 1 1 13.00 13 8 4 1 0 0 0
............................................................................................................TTGAGCAAAATCTCAGGTGTGTGA............................................................ 24 1 1 13.00 13 0 11 0 0 1 1
............................................................................................................TTGAGCAAAATTTCAGGGGTGTGA............................................................ 24 1 1 12.00 12 3 3 0 2 1 3
............................................................................................................TTGAGCAAAATTTCACGTGTGTGA............................................................ 24 1 1 12.00 12 1 9 0 0 0 2
............................................................................................................TTGATCAAAATTTCAGGTGTGTG............................................................. 23 1 1 12.00 12 8 4 0 0 0 0
............................................................................................................TTGAGCAAGATTTCAGGTGTGTG............................................................. 23 1 1 12.00 12 2 2 7 0 1 0
............................................................................................................TTGAGCAAAATTTCAGGTGTTTG............................................................. 23 1 1 12.00 12 7 2 0 0 0 3
............................................................TCGCGCCTGTATCTTGCTGA................................................................................................................ 20 0 1 11.00 11 3 0 8 0 0 0
............................................................................................................TTGAGCAAAATTTCATGTGTGT.............................................................. 22 1 1 11.00 11 7 4 0 0 0 0
............................................................................................................TTGAGCAAAATTTCCGGTGTGTGA............................................................ 24 1 1 11.00 11 3 1 0 4 1 2
............................................................................................................TTGAGCAACATTTCAGGTGTGTGA............................................................ 24 1 1 11.00 11 0 3 6 0 0 2
............................................................................................................TTGAGCAAAATATCAGGTGTGTGA............................................................ 24 1 1 10.00 10 0 9 0 0 0 1
............................................................................................................TTGAGCAAAATTTCAGGTGTGC.............................................................. 22 1 1 10.00 10 1 1 0 7 1 0
............................................................................................................GTGAGCAAAGTTTCAGGTGTGT.............................................................. 22 2 1 10.00 10 0 0 0 0 10 0
............................................................................................................TTGAGCAAAATTCCAGGTGTGTGA............................................................ 24 1 1 10.00 10 6 4 0 0 0 0
............................................................................................................TTGGGCAAAATTTCAGGTGTGTGA............................................................ 24 1 1 9.00 9 3 0 1 2 1 2
............................................................................................................TTGAGCAAAATTTCAGGTTTGTGA............................................................ 24 1 1 9.00 9 6 2 0 0 1 0
............................................................................................................TTGAGCAAAATTTAAGGTGTGTGA............................................................ 24 1 1 9.00 9 4 4 0 0 1 0
............................................................................................................CTGAGCAAAATTTCAGGTGTGTGA............................................................ 24 1 1 9.00 9 2 2 2 3 0 0
............................................................................................................TTGCGCAAAATTTCAGGTGTGTGA............................................................ 24 1 1 9.00 9 0 8 0 0 1 0
............................................................................................................TTGAGCAAAATTTCAGGTGTATGT............................................................ 24 2 1 9.00 9 6 3 0 0 0 0
...........................................................................................................CTTGAGCAAAATTTCAGGTGTGTGA............................................................ 25 1 1 8.00 8 2 0 0 6 0 0
............................................................................................................TTGAGCAAAATTACAGGTGTGTGA............................................................ 24 1 1 8.00 8 0 8 0 0 0 0
............................................................................................................TAGAGCAAAATTTCAGGTGTGTGA............................................................ 24 1 1 8.00 8 0 5 0 2 1 0
............................................................................................................TCGAGCAAAATTTCAGGTGTGTGA............................................................ 24 1 1 8.00 8 3 5 0 0 0 0
............................................................................................................TTGAGAAAAATTTCAGGTGTG............................................................... 21 1 1 8.00 8 5 3 0 0 0 0
............................................................................................................TTGAGCAAAATTTCAGGTGTCTG............................................................. 23 1 1 8.00 8 3 5 0 0 0 0
.............................................................CGCGCCTGTATCTTGCTGAACC............................................................................................................. 22 0 1 8.00 8 1 0 6 1 0 0
............................................................................................................TTGAGAAAAATTTCAGGTGTGTGT............................................................ 24 2 1 8.00 8 6 2 0 0 0 0
............................................................................................................TGGTGCAAAATTTCAGGTGTGTGA............................................................ 24 2 1 8.00 8 0 0 0 8 0 0
.............................................................................................................TGAGCAAAGTTTCAGGTGTGTGA............................................................ 23 1 1 8.00 8 1 0 6 0 0 1
............................................................TCGCGCCTGTATCTTGCTGAA............................................................................................................... 21 0 1 8.00 8 1 0 6 0 1 0
............................................................................................................TTGAGCAAAATTTCAGTTGTGTG............................................................. 23 1 1 8.00 8 2 2 0 0 1 3
............................................................................................................TTGAGCAAAAATTCAGGTGTGTGA............................................................ 24 1 1 8.00 8 1 7 0 0 0 0
............................................................................................................TTGAGCGAAATTTCAGGTGTGTGA............................................................ 24 1 1 8.00 8 3 5 0 0 0 0
............................................................................................................TTGAGCAAAATTTCAGGTTTGTG............................................................. 23 1 1 7.00 7 4 1 1 0 0 1
............................................................................................................TTGAGCAAAATATCAGGTGTGT.............................................................. 22 1 1 7.00 7 0 7 0 0 0 0
............................................................................................................TTAAGCAAAATTTCAGGTGTGT.............................................................. 22 1 1 7.00 7 2 3 1 0 1 0
............................................................................................................TTGAGCAATATTTCAGGTGTGTGA............................................................ 24 1 1 6.00 6 1 0 4 0 1 0
.............................................................................................................TGAGCAAAATTTCAGGTGT................................................................ 19 0 1 6.00 6 3 1 1 0 1 0
.............................................................................................................TGAGCAAAATTTCAGGTGTGTT............................................................. 22 1 1 6.00 6 5 0 1 0 0 0
............................................................................................................TTGTGCAAAATTTCAGGTGTGTG............................................................. 23 1 1 6.00 6 1 0 0 5 0 0
............................................................................................................TTGATCAAAATTTCAGGTGTGT.............................................................. 22 1 1 6.00 6 2 4 0 0 0 0
............................................................................................................TTGAGCGAAATTTCAGGTGTGT.............................................................. 22 1 1 6.00 6 1 4 0 0 1 0
............................................................................................................TTGAGCAAGATTTCAGGTGTGT.............................................................. 22 1 1 6.00 6 0 0 6 0 0 0
............................................................................................................TCGAGCAAAATTTCAGGTGTGT.............................................................. 22 1 1 6.00 6 1 1 0 1 3 0
............................................................................................................TTGAGCAAAATTTTAGGTGTGTGA............................................................ 24 1 1 6.00 6 3 1 0 2 0 0
............................................................................................................CTGAGCAAAATTTCAGGTGTGT.............................................................. 22 1 1 6.00 6 2 3 0 0 1 0
............................................................................................................TTCAGCAAAATTTCAGGTGTGTG............................................................. 23 1 1 6.00 6 1 0 1 4 0 0
............................................................................................................TTGAGCAAAATTTCAGGTGTGTGAAA.......................................................... 26 1 1 6.00 6 1 3 0 2 0 0
............................................................................................................TTGAGCAAAATTTCAGGTGCGTG............................................................. 23 1 1 6.00 6 1 4 0 0 0 1
............................................................................................................TTGAGCAAAATTTCAGGCGTGT.............................................................. 22 1 1 6.00 6 1 2 0 0 2 1
............................................................................................................TTGAGCAAAATTTAAGGTGTGT.............................................................. 22 1 1 6.00 6 5 0 0 0 1 0
............................................................................................................TTGAGCAAAATTACAGGTGTGTG............................................................. 23 1 1 6.00 6 0 6 0 0 0 0
............................................................................................................TTGAGCAAAATTTCGGGTGTGTGA............................................................ 24 1 1 6.00 6 2 3 0 0 0 1
............................................................................................................TTGAGCAAAATTTCAGGTCTGTGA............................................................ 24 1 1 6.00 6 2 0 1 0 3 0
............................................................................................................TTTAGCAAAATTTCAGGTGTGTT............................................................. 23 2 1 6.00 6 5 1 0 0 0 0
............................................................................................................TTGAGCAACATTTCAGGTGTGTG............................................................. 23 1 1 5.00 5 3 1 1 0 0 0
............................................................................................................TTGAGCAAAGTTTCAGGTGTGTGA............................................................ 24 1 1 5.00 5 2 3 0 0 0 0
............................................................................................................TTGAGCAAAATTTCAAGTGTGT.............................................................. 22 1 1 5.00 5 1 4 0 0 0 0
............................................................................................................TTGAGCAAAATTTCAGGTTTGT.............................................................. 22 1 1 5.00 5 5 0 0 0 0 0
............................................................................................................TTGAGCAAAACTTCAGGTGTGTG............................................................. 23 1 1 5.00 5 2 3 0 0 0 0
............................................................................................................TTGAACAAAATTTCAGGTGTGTGA............................................................ 24 1 1 5.00 5 1 2 1 0 1 0
............................................................................................................TTGAGCAAAACTTCAGGTGTGTGA............................................................ 24 1 1 5.00 5 1 3 0 0 0 1
..............................................................................................................GAGCAAAATTTCAGGTGTGTGA............................................................ 22 0 1 5.00 5 2 0 2 0 0 1
.............................................................................................................TTAGCAAAATTTCAGGTGTGTG............................................................. 22 1 1 5.00 5 4 1 0 0 0 0
............................................................................................................TTGAGCAGAATTTCAGGTGTGTGA............................................................ 24 1 1 5.00 5 2 2 0 1 0 0
............................................................................................................TTTAGCAAAATTTCAGGTGTG............................................................... 21 1 1 5.00 5 5 0 0 0 0 0
............................................................................................................TTGAACAAAATTTCAGGTGTGTG............................................................. 23 1 1 5.00 5 2 2 0 0 1 0
............................................................................................................ATGAGCAAAATTTCAGGTGTGTGA............................................................ 24 1 1 5.00 5 0 0 3 1 0 1
............................................................................................................TTTAGCAAAATTTCAGGTGTGTTA............................................................ 24 2 1 5.00 5 4 0 0 0 0 1
............................................................................................................TTGAGCAAAATTTCAGGTGTGGGA............................................................ 24 1 1 5.00 5 0 1 2 0 0 2
............................................................................................................TTGAGCAAAATTTCAGGTGTT............................................................... 21 1 1 5.00 5 2 2 0 0 1 0
............................................................................................................TTGAGCAAAATATCAGGTGTGTG............................................................. 23 1 1 5.00 5 0 5 0 0 0 0
............................................................................................................TTGAGCAAAATTTAAGGTGTGTG............................................................. 23 1 1 5.00 5 4 0 0 0 0 1
............................................................................................................TTGAGCAAAATTTCAGGTG................................................................. 19 0 1 5.00 5 4 0 0 1 0 0
.............................................................CGCGCCTGTATCTTGCTGAAC.............................................................................................................. 21 0 1 5.00 5 0 0 5 0 0 0
............................................................................................................TTGAGCAAAATTTCGGGTGTGT.............................................................. 22 1 1 5.00 5 4 1 0 0 0 0
............................................................................................................TTGAGCAAAATTCCAGGTGTGTG............................................................. 23 1 1 5.00 5 1 3 0 0 0 1
............................................................................................................TTGAGCAAAATTTCAGGTGAGTGA............................................................ 24 1 1 4.00 4 1 0 1 2 0 0
.............................................................................................................TGAGCAAAATTTCAGGTGTGCGA............................................................ 23 1 1 4.00 4 2 2 0 0 0 0
............................................................................................................TTGAGCAAACTTTCAGGTGTGTGA............................................................ 24 1 1 4.00 4 2 2 0 0 0 0
............................................................................................................TTGAGCAAAATTCCAGGTGTGT.............................................................. 22 1 1 4.00 4 2 2 0 0 0 0
.............................................................................................................TGAGCAAAATTTCAGGTGTGTGAT........................................................... 24 1 1 4.00 4 0 0 3 1 0 0
............................................................................................................TTGAGCAAAATTTCCGGTGTGTG............................................................. 23 1 1 4.00 4 2 0 0 1 0 1
............................................................................................................TTGAGCAAGATTTCAGGTGTGTGT............................................................ 24 2 1 4.00 4 2 1 1 0 0 0
.............................................................................................................TGAGCAAAATTTCAGGTGTGCG............................................................. 22 1 1 4.00 4 3 1 0 0 0 0
............................................................................................................TTGAGCAAGATTTCAGGTGTG............................................................... 21 1 1 4.00 4 1 0 3 0 0 0
............................................................................................................TCGAGCAAAATTTCAGGTGTGTG............................................................. 23 1 1 4.00 4 2 2 0 0 0 0
............................................................................................................TTGAGCAAAATGTCAGGTGTGTGA............................................................ 24 1 1 4.00 4 0 3 0 0 1 0
............................................................................................................TTGAGCAAAATTTCACGTGTGTG............................................................. 23 1 1 4.00 4 0 3 0 0 0 1
............................................................................................................TTGATCAAAATTTCAGGTGTG............................................................... 21 1 1 4.00 4 2 1 0 1 0 0
............................................................................................................TAGAGCAAAATTTCAGGTGTGT.............................................................. 22 1 1 4.00 4 0 4 0 0 0 0
............................................................................................................TTGAGCAAAATTTCAGGTGTCTGT............................................................ 24 2 1 4.00 4 1 3 0 0 0 0
............................................................................................................TTGAGCAAAATTTCAGGTGCGT.............................................................. 22 1 1 4.00 4 2 1 0 0 1 0
.............................................................................................................TTAGCAAAATTTCAGGTGTGT.............................................................. 21 1 1 4.00 4 1 3 0 0 0 0
............................................................................................................TTGAGTAAAATTTCAGGTGTGT.............................................................. 22 1 1 4.00 4 1 3 0 0 0 0
.............................................................................................................TGAGCAAAATTTCAGGTGTGAGA............................................................ 23 1 1 4.00 4 3 1 0 0 0 0
............................................................................................................TTGAGCAAAATTTGAGGTGTGTGA............................................................ 24 1 1 4.00 4 1 3 0 0 0 0
............................................................................................................TTGAGCAAAATTTCAGGTGTGTA............................................................. 23 1 1 4.00 4 1 2 0 1 0 0
............................................................................................................TTGAGCAAAATTTCAGGTCTGTG............................................................. 23 1 1 4.00 4 2 0 0 0 0 2
............................................................................................................TTGACCAAAATTTCAGGTGTGTG............................................................. 23 1 1 4.00 4 3 0 1 0 0 0
............................................................................................................TTGAGCAAAATTTCAGGGGTGTG............................................................. 23 1 1 4.00 4 1 1 0 0 1 1
............................................................................................................TTGAGCAAAATGTCAGGTGTGTG............................................................. 23 1 1 4.00 4 0 3 0 0 1 0
............................................................................................................TTGAGCAAAATTTCAGGCGTGTG............................................................. 23 1 1 4.00 4 2 2 0 0 0 0
............................................................................................................GTGAGCAAAATTTCAGGTGTGTGA............................................................ 24 1 1 4.00 4 0 1 3 0 0 0
............................................................................................................TTCAGCAAAATTTCAGGTGTGT.............................................................. 22 1 1 4.00 4 1 1 0 1 1 0
.............................................................................................................TGATCAAAATTTCAGGTGTGTGA............................................................ 23 1 1 3.00 3 1 2 0 0 0 0
............................................................................................................TTGAGCAGAATTTCAGGTGTGTG............................................................. 23 1 1 3.00 3 1 1 0 1 0 0
............................................................................................................TTGAGCAACATTTCAGGTGTGT.............................................................. 22 1 1 3.00 3 1 2 0 0 0 0
............................................................................................................TTGAGCAAAATTTCAGGTGTGTC............................................................. 23 1 1 3.00 3 0 2 0 1 0 0
.............................................................................................................CGAGCAAAATTTCAGGTGTGTGA............................................................ 23 1 1 3.00 3 2 0 0 1 0 0
............................................................................................................TTGAGCAAAATTTCGGGTGTGTG............................................................. 23 1 1 3.00 3 2 1 0 0 0 0
............................................................................................................TTGAGCAAAATTTCAGATGTGTGA............................................................ 24 1 1 3.00 3 1 2 0 0 0 0
............................................................................................................TTGAGCAAAATTTCAGGTGTGTAA............................................................ 24 1 1 3.00 3 2 0 0 1 0 0
............................................................................................................TTGAGCAAAATTTCAGGTGTA............................................................... 21 1 1 3.00 3 2 1 0 0 0 0
.............................................................................................................TGAGCAAAATTTCATGTGTGTGA............................................................ 23 1 1 3.00 3 1 0 0 0 0 2
............................................................................................................TTGAGCAAAATCTCAGGTGTGT.............................................................. 22 1 1 3.00 3 1 2 0 0 0 0
............................................................................................................TTGAGCAAAGTTTCAGGTGTGT.............................................................. 22 1 1 3.00 3 3 0 0 0 0 0
............................................................................................................TTGAGCAAAATTTCAGGTGTGTGAC........................................................... 25 1 1 3.00 3 1 0 0 2 0 0
............................................................................................................TTAAGCAAAATTTCAGGTGTGTGA............................................................ 24 1 1 3.00 3 3 0 0 0 0 0
............................................................................................................TTGAGCAAAAATTCAGGTGTGT.............................................................. 22 1 1 3.00 3 0 3 0 0 0 0
............................................................................................................ATGAGCAAAATTTCAGGTGTGTG............................................................. 23 1 1 3.00 3 1 0 0 0 2 0
............................................................................................................TTGAGCAAAATTTCAAGTGTGTG............................................................. 23 1 1 3.00 3 1 2 0 0 0 0
............................................................................................................TTGAGTAAAATTTCAGGTGTGTGA............................................................ 24 1 1 3.00 3 3 0 0 0 0 0
............................................................................................................TTGAGCAATATTTCAGGTGTGT.............................................................. 22 1 1 3.00 3 0 0 3 0 0 0
............................................................................................................TTGAGCAAAATTTCAGGTGTGTCA............................................................ 24 1 1 3.00 3 0 1 0 0 1 1
............................................................................................................TTGAGTAAAATTTCAGGTGTGTG............................................................. 23 1 1 3.00 3 2 1 0 0 0 0
............................................................................................................TTGAGCACAATTTCAGGTGTGTGA............................................................ 24 1 1 3.00 3 0 2 0 1 0 0
............................................................................................................GTGAGCAAAATTTCAGGTGTGTG............................................................. 23 1 1 3.00 3 1 1 1 0 0 0
.............................................................................................................TGAGCAAAATTTCAGCTGTGTGA............................................................ 23 1 1 3.00 3 0 2 0 0 0 1
............................................................................................................TTGGGCAAAATTTCAGGTGTGTG............................................................. 23 1 1 3.00 3 2 0 0 0 0 1
............................................................................................................TTGAGCAAAATTTCAGCTGTGTGA............................................................ 24 1 1 3.00 3 1 0 0 0 1 1
............................................................................................................TTGAGCAAAATTTCAGGAGTGT.............................................................. 22 1 1 3.00 3 1 1 0 0 1 0
............................................................................................................TTGAGCAAAATTTCAGGCGTGTGT............................................................ 24 2 1 3.00 3 1 1 0 0 1 0
............................................................................................................TTGAGCAAAATTTCAGGTGTTT.............................................................. 22 1 1 3.00 3 1 2 0 0 0 0
............................................................................................................TTGAGCAAAATTTCATGTGTGTGT............................................................ 24 2 1 3.00 3 1 1 0 0 1 0
............................................................................................................TGGAGCAAAATTTCAGGTGTG............................................................... 21 1 1 3.00 3 0 0 0 2 1 0
............................................................................................................TTGAGCAAAATTTCGTGTGTGTGA............................................................ 24 2 1 3.00 3 1 2 0 0 0 0
............................................................................................................TTGAGCAATATTTCAGGTGTGTG............................................................. 23 1 1 3.00 3 0 1 2 0 0 0
............................................................................................................TTGAGGAAAATTTCAGGTGTGTG............................................................. 23 1 1 3.00 3 1 2 0 0 0 0
.............................................................................................................TGAGCAAAATTTCAGGTGTGTGTT........................................................... 24 2 1 3.00 3 3 0 0 0 0 0
............................................................................................................TTAAGCAAAATTTCAGGTGTGTG............................................................. 23 1 1 3.00 3 3 0 0 0 0 0
..............................................................................................................GAGCAAAATTTCAGGTGTGTG............................................................. 21 0 1 3.00 3 1 0 2 0 0 0
................................................................................................................GCAAAATTTCAGGTGTGTGA............................................................ 20 0 1 3.00 3 0 0 1 1 1 0
............................................................................................................TTGAGCCAAATTTCAGGTGTGTGA............................................................ 24 1 1 3.00 3 1 2 0 0 0 0
............................................................................................................TTGAGCAAAATTTCAGCTGT................................................................ 20 1 1 2.00 2 0 2 0 0 0 0
............................................................................................................TTGAGCAAAATTTCAGTTGTG............................................................... 21 1 1 2.00 2 1 1 0 0 0 0
............................................................................................................TTGAGCAAAATTGCAGGTGTGTG............................................................. 23 1 1 2.00 2 0 2 0 0 0 0
............................................................................................................TTGAGCATAATTTCAGGTGTGTGA............................................................ 24 1 1 2.00 2 0 1 0 0 0 1
.............................................................................................................TGAGCAAAATTTCAGTTGTGTGA............................................................ 23 1 1 2.00 2 1 0 1 0 0 0
............................................................................................................TTTAGCAAACTTTCAGGTGTGTG............................................................. 23 2 1 2.00 2 1 1 0 0 0 0
............................................................................................................TTGAGCAAAATTACAGGTGTG............................................................... 21 1 1 2.00 2 0 2 0 0 0 0
............................................................TCGCGCCTCTATCTTGCTGAACC............................................................................................................. 23 1 1 2.00 2 0 0 2 0 0 0
.............................................................................................................TGAGAAAAATTTCAGGTGTGTG............................................................. 22 1 1 2.00 2 2 0 0 0 0 0
.............................................................................................................TCAGCAAAATTTCAGGTGTGTGA............................................................ 23 1 1 2.00 2 1 0 0 1 0 0
............................................................................................................TTGAGCAAAATTGCAGGTGTGT.............................................................. 22 1 1 2.00 2 0 0 0 0 2 0
............................................................................................................TTGAGCAAAATTTCTGGTGTGTG............................................................. 23 1 1 2.00 2 0 1 0 0 1 0
............................................................................................................TTTATCAAAATTTCAGGTGTGTGA............................................................ 24 2 1 2.00 2 1 1 0 0 0 0
............................................................................................................TTGAGCAAAATCTCAGGCGTGTGA............................................................ 24 2 1 2.00 2 0 0 0 0 0 2
.............................................................................................................TGCGCAAAATTTCAGGTGTGTGA............................................................ 23 1 1 2.00 2 0 0 0 2 0 0
.............................................................................................................TGAGCAAAATTTCAGGTGTGTGAC........................................................... 24 1 1 2.00 2 0 0 0 2 0 0
............................................................................................................TTGAGCAAGATTTCAGGTGTGTGAA........................................................... 25 2 1 2.00 2 0 0 2 0 0 0
.............................................................................................................TGAGCAAAATTTCAGGTGTGTGAAA.......................................................... 25 1 1 2.00 2 1 0 1 0 0 0
............................................................................................................TTGAGCAAAATTTCAGGCGTATG............................................................. 23 2 1 2.00 2 0 0 0 0 0 2
............................................................................................................TTGAGCAAAATTTCAGGTATGTG............................................................. 23 1 1 2.00 2 1 0 0 0 0 1
............................................................................................................TTGAGCAAAACTTCAGGTGTGT.............................................................. 22 1 1 2.00 2 1 1 0 0 0 0
............................................................................................................TTGAGCAAAATTTCACGTGTG............................................................... 21 1 1 2.00 2 2 0 0 0 0 0
............................................................................................................TTGAGCAAAATTTCAGGTGC................................................................ 20 1 1 2.00 2 1 0 0 1 0 0
............................................................................................................TTGAACAAAATTTCAGGTGTGT.............................................................. 22 1 1 2.00 2 1 1 0 0 0 0
.............................................................................................................TGAGCAAAATTTCAGGTTTGTGA............................................................ 23 1 1 2.00 2 1 0 0 0 0 1
............................................................................................................CTGAGCAAAATTTCAGGTGTGTGT............................................................ 24 2 1 2.00 2 1 1 0 0 0 0
............................................................................................................TTGAGGAAAATTTCAGGTGTGTGA............................................................ 24 1 1 2.00 2 1 1 0 0 0 0
............................................................................................................TTGAGCAAAATCTCAGGTGTGTG............................................................. 23 1 1 2.00 2 1 1 0 0 0 0
............................................................................................................TTGAGCAAAATTTCAGGTGTGTGATT.......................................................... 26 2 1 2.00 2 0 1 0 1 0 0
.............................................................................................................TGAGCAAGATTTCAGGTGTGTGA............................................................ 23 1 1 2.00 2 1 0 0 0 0 1
............................................................................................................TTGAGCAAAATTTCAGGTGTGCG............................................................. 23 1 1 2.00 2 0 0 0 0 0 2
.............................................................................................................TGATCAAAATTTCAGGTGTGTT............................................................. 22 2 1 2.00 2 2 0 0 0 0 0
............................................................................................................TTGAGCAAAATGTCAGGTGTGT.............................................................. 22 1 1 2.00 2 0 2 0 0 0 0
............................................................................................................TTGACCAAAATTTCAGGTGTGTGA............................................................ 24 1 1 2.00 2 1 1 0 0 0 0
............................................................................................................TTGAGCAAAATTTCAGGAGTGTGA............................................................ 24 1 1 2.00 2 2 0 0 0 0 0
.............................................................................................................TGAGCAAAATTCCAGGTGTGTGA............................................................ 23 1 1 2.00 2 1 1 0 0 0 0
..................................................................................................................AAAATTTCAGGTGTGTGA............................................................ 18 0 1 2.00 2 0 0 1 1 0 0
............................................................................................................TAGAGCAAAATTTCAGGTGTGTG............................................................. 23 1 1 2.00 2 0 2 0 0 0 0
............................................................................................................TTGACCAAAATTTCAGGTGTGT.............................................................. 22 1 1 2.00 2 0 2 0 0 0 0
............................................................................................................TTGAGCAAAATTTCAGGTGTGTGATTT......................................................... 27 3 1 2.00 2 0 2 0 0 0 0
............................................................................................................TGGAGCAAAATTTCAGGTGTGT.............................................................. 22 1 1 2.00 2 0 0 0 1 1 0
............................................................................................................TGGAGCAAAATTTCAGGGGTGTGA............................................................ 24 2 1 2.00 2 0 0 0 1 1 0
.............................................................CTCGCCTGTATCTTGCTGAACC............................................................................................................. 22 1 1 2.00 2 0 0 0 2 0 0
.............................................................................................................TGAGCAAAGTTTCAGGTGTGTG............................................................. 22 1 1 2.00 2 0 0 2 0 0 0
............................................................................................................TTGAGCAAAATTTCAGGTGTGGG............................................................. 23 1 1 2.00 2 0 0 1 0 1 0
............................................................................................................TTGAGCAAAATTTCAGGTATGTGA............................................................ 24 1 1 2.00 2 0 1 0 0 1 0
............................................................................................................TTGAGCAAAATTTCAGGTTTG............................................................... 21 1 1 2.00 2 1 0 1 0 0 0
............................................................................................................TTGGGCAAAATTTCAGGTGTG............................................................... 21 1 1 2.00 2 2 0 0 0 0 0
............................................................................................................TTGAGCAAAATTTCAGGTGTGAGA............................................................ 24 1 1 2.00 2 2 0 0 0 0 0
............................................................................................................TTGAGCAAAATTTCAGGTGTGTGTTT.......................................................... 26 3 1 2.00 2 1 1 0 0 0 0
............................................................................................................TTGCGCAAAATTTCAGGTGT................................................................ 20 1 1 2.00 2 0 1 0 0 1 0
.............................................................................................................TGGGCAAAATTTCAGGTGTGTGA............................................................ 23 1 1 2.00 2 1 1 0 0 0 0
............................................................................................................TAGAGCAAAATTTCAGGTGTG............................................................... 21 1 1 2.00 2 0 2 0 0 0 0
............................................................................................................TTTAGCAAAATTTCAGGTGTTTGA............................................................ 24 2 1 2.00 2 2 0 0 0 0 0
............................................................................................................TTGAGCAAAATTTCCGGTGTGT.............................................................. 22 1 1 2.00 2 0 2 0 0 0 0
.............................................................................................................TGAGCAAAATTTAAGGTGTGTGA............................................................ 23 1 1 2.00 2 1 1 0 0 0 0
............................................................................................................TTGAGCAAAATTACAGGTGTGT.............................................................. 22 1 1 2.00 2 0 2 0 0 0 0
............................................................TCCCGCCTGTATCTTGCTGAACC............................................................................................................. 23 1 1 2.00 2 0 0 0 2 0 0
.............................................................................................................TGAGCAAATTTTCAGGTGTGTGA............................................................ 23 1 1 2.00 2 0 0 2 0 0 0
............................................................................................................TTGAGCAGAATTTCAGGTGTGT.............................................................. 22 1 1 2.00 2 2 0 0 0 0 0
............................................................................................................TTGAGCGAAATTTCAGGTGTGTG............................................................. 23 1 1 2.00 2 1 0 0 0 0 1
.............................................................................................................TGAGAAAAATTTCAGGTGTGT.............................................................. 21 1 1 2.00 2 0 1 0 0 1 0
............................................................................................................TGGAGCAAAATTTCAGGTGTGTGT............................................................ 24 2 1 2.00 2 0 1 0 1 0 0
.............................................................................................................TGAGCAAAATTTCAGGTGTGTGAG........................................................... 24 0 1 2.00 2 1 0 0 0 1 0
............................................................................................................TTGAGCAAAATTTCAGTTGTGT.............................................................. 22 1 1 2.00 2 1 0 0 0 1 0
............................................................................................................TTGAGCAAAGTTTCAGGTGTGTG............................................................. 23 1 1 2.00 2 1 1 0 0 0 0
............................................................................................................TTGAGCAAAATTTGAGGTGTGTG............................................................. 23 1 1 2.00 2 0 2 0 0 0 0
............................................................................................................TTTATCAAAATTTCAGGTGTGT.............................................................. 22 2 1 2.00 2 1 1 0 0 0 0
...........................................................................................................CTTGAGCAAAATTTCAGGTGTGTG............................................................. 24 1 1 2.00 2 1 0 0 0 1 0
.............................................................................................................TGAGCAAAATTTCAGGTGCGTGA............................................................ 23 1 1 2.00 2 0 1 0 0 1 0
.............................................................................................................TGAGAAAAATTTCAGGTGTGTGA............................................................ 23 1 1 2.00 2 1 1 0 0 0 0
.............................................................................................................TGAGCAAAATTTCATGTGTGTGT............................................................ 23 2 1 2.00 2 0 2 0 0 0 0
............................................................................................................TTGACCAAAATTTCAGGTGTGTGT............................................................ 24 2 1 2.00 2 1 1 0 0 0 0
............................................................................................................TTGAGCAAGAGTTCAGGTGTGTGA............................................................ 24 2 1 2.00 2 0 2 0 0 0 0
............................................................................................................TTGAGCAAAATTTCAGGAGTGTG............................................................. 23 1 1 2.00 2 0 2 0 0 0 0
............................................................................................................TTGAGCAATATTTCAGGTGTG............................................................... 21 1 1 2.00 2 0 0 2 0 0 0
............................................................................................................TTGAGCAAAAGTTCAGGTGTGTGA............................................................ 24 1 1 2.00 2 0 2 0 0 0 0
............................................................TCGCGCCTTTATCTTGCTGAACC............................................................................................................. 23 1 1 2.00 2 0 0 2 0 0 0
............................................................................................................CTGAGCAAAATTTCAGGTGTGTG............................................................. 23 1 1 2.00 2 2 0 0 0 0 0
............................................................................................................TTTAGCAAAATTTCAGGTGTGTGAT........................................................... 25 2 1 2.00 2 2 0 0 0 0 0
.............................................................................................................GGAGCAAAATTTCAGGTGTGTGA............................................................ 23 1 1 2.00 2 0 0 0 0 1 1
............................................................................................................TTGAGCAAAATTTAAGGCGTGTG............................................................. 23 2 1 2.00 2 0 2 0 0 0 0
............................................................TCGCGCCTATATCTTGCTGAACC............................................................................................................. 23 1 1 2.00 2 0 0 2 0 0 0
............................................................................................................TTGAGTAAAATTTCAGGTGTG............................................................... 21 1 1 2.00 2 1 1 0 0 0 0
............................................................................................................AAGAGCAAAATTTCAGGTGTGTGA............................................................ 24 2 1 2.00 2 0 2 0 0 0 0
.............................................................................................................TGAGCAAAATTTCAGGCGTGTGA............................................................ 23 1 1 2.00 2 0 0 0 1 0 1
...........................................................................................................CTTGAGCAAAATTTCAGGTGTGT.............................................................. 23 1 1 2.00 2 1 1 0 0 0 0
...........................................................................................................ATTGAGCAGAATTTCAGGTGTGTGA............................................................ 25 2 1 1.00 1 0 0 1 0 0 0
............................................................................................................TGGAGCAAATTTTCAGGTGTGTGA............................................................ 24 2 1 1.00 1 0 0 0 0 0 1
............................................................................................................TGGAGCTAGATTTCAGGTGTGTGA............................................................ 24 3 1 1.00 1 0 0 0 0 0 1
............................................................................................................TTGAGCAATATTTCAGGTGTGGG............................................................. 23 2 1 1.00 1 0 0 1 0 0 0
............................................................................................................TTGAGCAAAACTTCAGGTGTGCG............................................................. 23 2 1 1.00 1 0 1 0 0 0 0
............................................................................................................TTGAGTAAAATTTCAGTTGTGTGA............................................................ 24 2 1 1.00 1 0 1 0 0 0 0
............................................................................................................TTGAGCAAAATTTCAGGTGTTTGTT........................................................... 25 3 1 1.00 1 1 0 0 0 0 0
............................................................................................................TTGAGCAAAAATCCAGGTGTGTGA............................................................ 24 2 1 1.00 1 0 0 0 0 0 1
............................................................................................................TTGAGCAAAATTTCAGGTGTTTGT............................................................ 24 2 1 1.00 1 0 1 0 0 0 0
............................................................................................................TTGAGCAAAATTTCAGGTGTGG.............................................................. 22 1 1 1.00 1 0 0 0 0 1 0
............................................................TCGCGCCTGTATCTTGCTGAT............................................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0
............................................................................................................TTGAGCAAAATTTCAGGTATGT.............................................................. 22 1 1 1.00 1 1 0 0 0 0 0
............................................................................................................TTGAGCAAAATTTCAGGTCTG............................................................... 21 1 1 1.00 1 1 0 0 0 0 0
............................................................................................................TGGAGCAATATTTCAGGTGTGTGG............................................................ 24 3 1 1.00 1 0 0 0 0 1 0
............................................................................................................TTGAGCAAAATTTCAGGTGTGTGGA........................................................... 25 2 1 1.00 1 0 0 0 1 0 0
............................................................................................................TTGATCAAAATTTCAGGTGTATGA............................................................ 24 2 1 1.00 1 1 0 0 0 0 0
............................................................................................................TTGAGCAAAATTGCAGGTGTG............................................................... 21 1 1 1.00 1 0 1 0 0 0 0
...............................................................................................................AGCAAAATTTCAGGTGTGT.............................................................. 19 0 1 1.00 1 0 0 1 0 0 0
...........................................................................................................TTTGAGCAAAATTTCAGGTGTGTG............................................................. 24 1 1 1.00 1 0 0 1 0 0 0
............................................................................................................TTGAGCAAAATTTCAGGTGTGTCT............................................................ 24 2 1 1.00 1 0 0 0 0 1 0

Anti-sense strand reads

ATCACGATCACTTCGTATCTAAGACCTAAATTCACTTAGGAAAGTTCGCCGTATAAAGTAAGCGCGGACATAGAACGACTTGGCAATGGCTATACCGTGTCTTAGGCCAACTCGTTTTAAAGTCCACACACTCTTTAAACAATTCGTTAGAAGTTTTCTATCAAACCTTATGTTAGCTCTAGAAACTCAGGA

*********************************************.((((((.(((((...((((((((.((.(((((.(((((.....................))))).))))).))..))))))))...))))).))))..)).********************************************* 		Read size # Mismatch Hit Count Total Norm Total M044

female body

 V055

head

 V039

embryo
.....................................................................................................................................................................CCTTATGTTAGCTCTAGAAACTCAG.. 25 0 1 1.00 1 1 0 0
...............................................................................................................TCGCTTTGAAGTCCAGACACT............................................................ 21 3 2 0.50 1 0 1 0
....................................................................................................................................................................CCCTTATGTTAGCGCTCGA......... 19 3 7 0.14 1 0 0 1
..................................................................AACATAGAACGAATTGGAAAT......................................................................................................... 21 3 17 0.06 1 0 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Type Alignment
droAna3 scaffold_12916:13789728-13789919 - dan-mir-87 Known_mirbase T--AGTGCT--------------AG-TGA---------------------------------------------AGCATAG-------ATTCTGGATTTA-A----G-------TGAATCCT-----TTCAAGCGGCATATTTCATTCGCGCCTGTATCTTGCTGAACCGT-TACCG-ATATGGCACAGAA-TCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATTTGTTAAGCAATCTTCAAAAGAT---------------AGTTTGGAATA------CAAT-----------------CGAGATCTTT------GAGTCCT--
droBip1 scf7180000396535:753781-753975 - C--AGTGCC--------------AG-TAC---------------------------------------------AGCATACAGTCTGGATTTA-AGTG-------------A--AGAATCCT-----TTCAAGCGGCATATTTCATTCGCGCCTGTATCTTGCTGAACCGT-TACCA-ATGTGGCACACAA-TCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATTTGTTAAGCAATCATCAAATGAT---------------AGTTTGGAGTA------CAAT-----------------CGAGGTCCAG------AAGTCCT--
droKik1 scf7180000302677:173609-173774 + C-GAGTG---------------------------------------------AG-------------TTGATGATTCATAC-------ATCCTTTGTGGAAT--------TATTATAATCCT-----TC-GGGCGGCATATTTCATTCGCGCCTGTATCTTGCTGAACCGT-TACCA-TTTGGGCCTACAA-TCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATTTGTTAAGCAATCTTCAATGGGT------------------------------------------------------------------------------
droFic1 scf7180000449513:62-204 + C--AGT---------------------------------------------------------------AGTGATTCATACA------GTTTTTGC----------C----A--AAACTCCT-----TT--GGCGGCATATTTCATTCGCGCCTGTATCTTGCTGAACCGT-TGCCAATATTGGCCTACGA-TCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATTTGTTAAGCATTC----------------------------------------------------------------------------------------
droEle1 scf7180000491186:3003982-3004146 - C--AGTGAT--------------AG-TGATTCATCTAA-ATGT---------------------------GTGATTCATCT-------GGGCTA----------------------GCTCCT-----TT--GGCGGCATATTTCATTCGCGCCTGTATCTTGCTGAACCGTTTACCA-TATTGGCCTTCGA-TCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATTTGTTAAGCATTCATCCAAAAA-------------------------------------------------------------------------------
droRho1 scf7180000779234:243614-243812 + A--ACT---------------------------------------------TGG-------------TTGGTGATTCATCT-------GTGCTTAGTGGA-C----T-------ACAGTCCT-----TT--GGCGGCATATTTCATTCGCGCCTGTATCTTGCTGAACCGT-TACCA-TATTGGCCATCGA-TCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATTTGTTAAGCATTCATCCACGAAAGTGT-------------TCTGGA-----------AACGATATGGTA----CAAGGAGATCTTTTC---------CT--
droBia1 scf7180000301468:52265-52431 - C--AGTGTG--------------GG-TG------------------------AT-------------GTGGTGACTCATGT-------ATCCTTGGTGTATC----C----A--AAAATCCT------A--GGCGGCATATTTCATTCGCGCCTGTATCTTGCTGAACCGT-TGCCA-CTTTGGCCTACGA-TCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATTTGTTAAGCTTTCATCGAGGGAT------------------------------------------------------------------------------
droTak1 scf7180000415667:562522-562691 + C--AGTGAT--------------GG-TGT----------------------GAC-------------TTGGTGATTCATTT-------ATCCTGAGTGAACCTTACT-------TAA---AT-----TA--AGCGGCATATTTCATTCGCGCCTGTATCTTGCTGAACCGT-TACCA-CTTTGGCCTTCGA-TCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATTTGTTAAGCAACCATCGAGGGAT------------------------------------------------------------------------------
droEug1 scf7180000409554:4961868-4962069 + C--AGTGAA--------------AG-T------------------------TAC-------------TTGGTGGATTATTT-------GTCCTGACTAAA-T----T-------TAAGTCCT-----TT--AGCGGCATATTTCATTCGCGCCTGTATCTTGCTGAACCGT-TACCA-TATTGGCCCAAGA-TCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATTTGTTAAGCATTCATCGAAGGAT---TTCTA-------A------------------AAGGATAAG---TTTGTAGAGTGATCTTTAT---------CT--
dm3 chr2L:9950393-9950571 - dme-mir-87 Known_mirbase C--AGTGGT--------------GG-T-------------------------AC-------------ATGGTGATTCATTTC------GTCCTCGTTGACAC----C-------AAAGTCCT-----TT--GGCAACACATTTCATTCGCGCCTGTATCTTGCTGAACCGC-TGCCA-TTATGGCCAACGA-TCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATGTGTTTAGCATTCATCGGAGAAT---TTTCC-------AGTTT------GG--------------------------------------------------
droSim2 2l:9648349-9648578 - dsi-mir-87 Known_mirbase C--AGTGTT--------------AGATGATAC--T----------------TAA-------------ATGGTGATTAATTTC------GTCCTGGCTGACAC----T-------TAAGTCCT-----TT--GGCGGCACATTTCATTCGCGCCTGTATCTTGCTGAACCGC-TGCCA-TCATGGCCAACGA-TCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATGTGTTTAGCATTCATCGGAGGAT---TTTCC-------AGTCT------GGTAAA-----GTGATGGGGCTTGAATGGAGATCATTTCCGGTGAGTATT--
droSec2 scaffold_3:5397094-5397296 - dse-mir-87 Known_mirbase A--CTTGCT--------------AC-T------------------------TAA-------------ATGGTGATTCATTTC------GTCCTGGCTGACAA----C-------CAAGTCCT-----TT--GGCGGCACATTTCATTCGCGCCTGTATCTTGCTGAACCGC-TGCCA-TCATGGCCAACGA-TCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATGTGTTTAGCATTCATCGGAGGAT---TTATC-------AGACT------GG---------------------------TGATCATTTCCGGTGAGTATTCA
droYak3 2L:12640923-12641142 - dya-mir-87 Known_mirbase TCCAGTGCT--------------AG-TCATAT--C----------------TAC-------------TTGGTGATTCATTT-------GTCCTGGTTGTG-T----C-------CAAGTCCT-----TT--GGCGGCATATTTCATTCGCGCCTGTATCTTGCTGAACCGT-TACAA-TTATGGTCTTCGA-TCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATTTGTTTAGCATTCATCGGAGGAT---TTGCA-------AAGTT------GGTAAA-----GCAATGCGGCTTGGGTGGAGATCCTTAT---------CT--
droEre2 scaffold_4929:10570533-10570704 - der-mir-87 Known_mirbase C--AGTGCT--------------AG-TGATAC--C----------------TAC-------------TTGGTGATTCATTT-------GTCCTTGCTGAA-C----A-------CGAGTCCT-----TT--GGCGGCATATTTCATTCGCGCCTGTATCTTGCTGAACCGT-TGCCA-TTATGGCCTACGA-TCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATTTGTTTAGCATTCATCGGACGAT------------------------------------------------------------------------------
dp5 4_group3:220080-220225 + dps-mir-87 Known_mirbase T--GGTGCT-----------------------------------------------------------TGGAGATTT---------------TCCTTGACAT----C-------------CTACCGTGT--GCTGGCATATTTCATTCGCGCCTGTATCTTGCTGAACCGT-AGCCA-TAATGGTCTTTCATCCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATTTGTTAAGCAATCTTCA------------------------------------------------------------------------------------
droPer2 scaffold_1:1694881-1695026 + dpe-mir-87 Known_mirbase T--GGTGCT-----------------------------------------------------------TAGAGATTT---------------TCCTTGACAT----C-------------CTACCGTGT--GCTGGCATATTTCATTCGCGCCTGTATCTTGCTGAACCGT-AGCCA-TAATGGTCTTTCATCCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATTTGTTAAGCAATCTTCA------------------------------------------------------------------------------------
droWil2 scf2_1100000004521:12257658-12257867 - dwi-mir-87-1 Known_mirbase T--ACC--T--------------TG-TGT--------------GTGGGTGTGTCTGTGTCCC----T----------GTGT-------ATCCTTCATGGTTC----CAATCAAAATTAACAT-----TT-GGCCGGCATATTTCATTCGCGCCTGTATCTTGCTGAACCGT-TACCAATTGTGATCATCATTTCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATTTGTGACGGTAACATCGTTGGAA---TACCC------------------------CAAAC--------------GAAGTGATCA---------AATATT--
droVir3 scaffold_12723:3996201-3996373 + dvi-mir-87 Known_mirbase T--GC-GATTGCAGGCTAACAGGAG----TTCAT-----------------------------CTTTCTGGTG-C-----------------------------------------TATCCC----TTG--GCCGGCATATTTCATTCGCGCCTGTATCTTGCTGAACCGT-TACAA-TTGAGACATCTAAATCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATTTGTAGCGGTATCATCATGACA--------AAAAAGAAAGT------------------------------------------------------------
droMoj3 scaffold_6500:14729853-14729999 - dmo-mir-87 Known_mirbase C--AGTGCT--------------AC-T-------------------------AT-------------TTGGGAGC-----------------------------------------TATCCT-----TA--GCCGGCATCTTTCATTCGCGCCTGTATCTTGCTGAACCGT-TACAA-TTGTCACATCCAAATCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATTTGTAGCGGTCTCATCAAAGCAA---------------AGT------------------------------------------------------------
droGri2 scaffold_15252:3661321-3661474 - dgr-mir-87 Known_mirbase T--GGTA-T--------------AG-TCG---A----ATTTGTGTAACTCTCTCTCTCTCACTCTCTGTGGTG-T-----------------------------------------TATCCT-----TG--ACCGGCATATTTCATTCGCGCCTGTATCTTGCTGAACCGT-TACCA-TTGTGACATCCAAATCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATTTGT-------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droAna3
T--AGTGCT--------------AG-TGA---------------------------------------------AGCATAG-------ATTCTGGATTTA-A----G-------TGAATCCT-----TTCAAGCGGCATATTTCATTCGCGCCTGTATCTTGCTGAACCGT-TACCG-ATATGGCACAGAA-TCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATTTGTTAAGCAATCTTCAAAAGAT---------------AGTTTGGAATA------CAAT-----------------CGAGATCTTT------GAGTCCT--SizeHit CountTotal NormTotalM044

Female-body		M058

Embryo		V039

Embryo		V055

Head		V105

Male-body		V106

Head
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGA..........................................................................................................2417304.00730470052040432123672992
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTG...........................................................................................................2313217.00321725610114712310941496
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGT............................................................................................................2212325.002325236214186898980
......................................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGA..........................................................................................................231757.00757106594829126389
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGT..........................................................................................................241653.00653308527252331
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTG.............................................................................................................211584.005847513430170292
......................................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTG...........................................................................................................221302.00302366141256178
......................................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGT............................................................................................................211129.00129150093471
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGT..............................................................................................................201124.0012441393968
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGAA.........................................................................................................25162.00621611211814
......................................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGT..........................................................................................................23158.005860061432
..................................................................................................................................................TCGCGCCTGTATCTTGCTGAACC..............................................................................................................................................................23158.005829270101
..................................................................................................................................................TCGCGCCTGTATCTTGCTGAAC...............................................................................................................................................................22157.005739110412
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGAT.........................................................................................................25142.004273231413
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTT...........................................................................................................23134.003431521013
......................................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGAA.........................................................................................................24128.00281030096
......................................................................................................................................................................................................TGAGCAAAATTTCAGGTGTG.............................................................................................................20125.00255100415
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGG..........................................................................................................24122.0022603076
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGC..........................................................................................................24119.0019121492
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGTT.........................................................................................................25115.0015100176
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGA............................................................................................................22113.0013100048
..................................................................................................................................................TCGCGCCTGTATCTTGCTGA.................................................................................................................................................................20111.0011800003
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGC............................................................................................................22110.0010070111
...................................................................................................................................................CGCGCCTGTATCTTGCTGAACC..............................................................................................................................................................2218.008610001
..................................................................................................................................................TCGCGCCTGTATCTTGCTGAA................................................................................................................................................................2118.008600101
......................................................................................................................................................................................................TGAGCAAAATTTCAGGTGT..............................................................................................................1916.006100113
......................................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTT...........................................................................................................2216.006100005
.......................................................................................................................................................................................................GAGCAAAATTTCAGGTGTGTGA..........................................................................................................2215.005201002
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTT.............................................................................................................2115.005000122
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTG...............................................................................................................1915.005010004
...................................................................................................................................................CGCGCCTGTATCTTGCTGAAC...............................................................................................................................................................2115.005500000
......................................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGAT.........................................................................................................2414.004310000
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTA...........................................................................................................2314.004010021
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTC...........................................................................................................2313.003010020
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTA.............................................................................................................2113.003000012
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGAC.........................................................................................................2513.003020001
......................................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGTT.........................................................................................................2413.003000003
.......................................................................................................................................................................................................GAGCAAAATTTCAGGTGTGTG...........................................................................................................2113.003200001
.........................................................................................................................................................................................................GCAAAATTTCAGGTGTGTGA..........................................................................................................2013.003110100
......................................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGAC.........................................................................................................2412.002020000
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGC..............................................................................................................2012.002010001
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGATT........................................................................................................2612.002010010
...........................................................................................................................................................................................................AAAATTTCAGGTGTGTGA..........................................................................................................1812.002110000
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGATTT.......................................................................................................2712.002000020
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGTTT........................................................................................................2612.002000011
......................................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGAG.........................................................................................................2412.002000101
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGG............................................................................................................2211.001000100
..................................................................................................................................................TCGCGCCTGTATCTTGCTGAT................................................................................................................................................................2111.001000001
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGGA.........................................................................................................2511.001010000
........................................................................................................................................................................................................AGCAAAATTTCAGGTGTGT............................................................................................................1911.001100000
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTCT..........................................................................................................2411.001000100
droBip1
C--AGTGCC--------------AG-TAC---------------------------------------------AGCATACAGTCTGGATTTA-AGTG-------------A--AGAATCCT-----TTCAAGCGGCATATTTCATTCGCGCCTGTATCTTGCTGAACCGT-TACCA-ATGTGGCACACAA-TCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATTTGTTAAGCAATCATCAAATGAT---------------AGTTTGGAGTA------CAAT-----------------CGAGGTCCAG------AAGTCCT--SizeHit CountTotal NormTotal
No Reads
droKik1
C-GAGTG---------------------------------------------AG-------------TTGATGATTCATAC-------ATCCTTTGTGGAAT--------TATTATAATCCT-----TC-GGGCGGCATATTTCATTCGCGCCTGTATCTTGCTGAACCGT-TACCA-TTTGGGCCTACAA-TCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATTTGTTAAGCAATCTTCAATGGGT------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droFic1
C--AGT---------------------------------------------------------------AGTGATTCATACA------GTTTTTGC----------C----A--AAACTCCT-----TT--GGCGGCATATTTCATTCGCGCCTGTATCTTGCTGAACCGT-TGCCAATATTGGCCTACGA-TCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATTTGTTAAGCATTC----------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
C--AGTGAT--------------AG-TGATTCATCTAA-ATGT---------------------------GTGATTCATCT-------GGGCTA----------------------GCTCCT-----TT--GGCGGCATATTTCATTCGCGCCTGTATCTTGCTGAACCGTTTACCA-TATTGGCCTTCGA-TCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATTTGTTAAGCATTCATCCAAAAA-------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
A--ACT---------------------------------------------TGG-------------TTGGTGATTCATCT-------GTGCTTAGTGGA-C----T-------ACAGTCCT-----TT--GGCGGCATATTTCATTCGCGCCTGTATCTTGCTGAACCGT-TACCA-TATTGGCCATCGA-TCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATTTGTTAAGCATTCATCCACGAAAGTGT-------------TCTGGA-----------AACGATATGGTA----CAAGGAGATCTTTTC---------CT--SizeHit CountTotal NormTotal
No Reads
droBia1
C--AGTGTG--------------GG-TG------------------------AT-------------GTGGTGACTCATGT-------ATCCTTGGTGTATC----C----A--AAAATCCT------A--GGCGGCATATTTCATTCGCGCCTGTATCTTGCTGAACCGT-TGCCA-CTTTGGCCTACGA-TCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATTTGTTAAGCTTTCATCGAGGGAT------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droTak1
C--AGTGAT--------------GG-TGT----------------------GAC-------------TTGGTGATTCATTT-------ATCCTGAGTGAACCTTACT-------TAA---AT-----TA--AGCGGCATATTTCATTCGCGCCTGTATCTTGCTGAACCGT-TACCA-CTTTGGCCTTCGA-TCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATTTGTTAAGCAACCATCGAGGGAT------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEug1
C--AGTGAA--------------AG-T------------------------TAC-------------TTGGTGGATTATTT-------GTCCTGACTAAA-T----T-------TAAGTCCT-----TT--AGCGGCATATTTCATTCGCGCCTGTATCTTGCTGAACCGT-TACCA-TATTGGCCCAAGA-TCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATTTGTTAAGCATTCATCGAAGGAT---TTCTA-------A------------------AAGGATAAG---TTTGTAGAGTGATCTTTAT---------CT--SizeHit CountTotal NormTotal
No Reads
dm3
C--AGTGGT--------------GG-T-------------------------AC-------------ATGGTGATTCATTTC------GTCCTCGTTGACAC----C-------AAAGTCCT-----TT--GGCAACACATTTCATTCGCGCCTGTATCTTGCTGAACCGC-TGCCA-TTATGGCCAACGA-TCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATGTGTTTAGCATTCATCGGAGAAT---TTTCC-------AGTTT------GG--------------------------------------------------SizeHit CountTotal NormTotalGSM154618

Ovary		GSM154620

Ovary		GSM154621

Ovary		GSM154622

Ovary		GSM180328

Head		GSM180329

Mixed-body		GSM180330

Embryo		GSM180331

Embryo		GSM180332

Embryo		GSM180333

Embryo		GSM180334

Larvae		GSM180335

Disc		GSM180336

Pupae		GSM180337

S2		GSM239041

Head		GSM239050

Head		GSM239051

S2		GSM239052

S2		GSM246084

Head		GSM266765

S2		GSM280082

Ovary		GSM280083

Ovary		GSM280084

Ovary		GSM280085

Testis		GSM280086

Ovary		GSM280087

S2-NP		GSM280088

S2-NP		GSM312995

Head		GSM313160

Head		GSM313161

Head		GSM313162

Head		GSM313163

Head		GSM313164

Head		GSM313165

Head		GSM343287

Embryo		GSM379050

Ovary		GSM379051

Ovary		GSM379052

Ovary		GSM379053

Ovary		GSM379054

Ovary		GSM379055

Ovary		GSM379056

Ovary		GSM379057

Ovary		GSM379058

Ovary		GSM379059

Ovary		GSM379060

Ovary		GSM379061

Ovary		GSM379062

Ovary		GSM379063

Ovary		GSM379064

Ovary		GSM379065

Ovary		GSM379066

Ovary		GSM379067

Ovary		GSM424739

S2		GSM424740

S2		GSM424741

S2		GSM467729

Female-body		GSM467730

Female-body		GSM467731

Female-body		M002

CS		M003

Male-body		M004

Male-body		M005

ML-DmD32		M006

ML-DmD32		M029

OSC		M030

OSC		M031

OSC		M032

S2-R+		M033

S2-R+		M034

S2-R+		M035

S2-R+		M036

S2-R+		M037

S2-R+		M038

S2-R+		M039

S2-R+		M048

S2-R+		OSS2

OSS		OSS6

OSS		OSS7

OSS		OSS8

OSS		S1

Head		S10

Embryo		S11

Embryo		S12

Embryo		S13

Embryo		S14

Embryo		S15

S2-GMR		S16

Kc		S17

Larvae		S18

Larvae		S19

Pupae		S2

Head		S20

Pupae		S21

Disc		S22

Head		S23

Female-body		S24

Male-body		S25

Larvae		S26

Larvae		S27

Pupae		S28

Pupae		S29

Head		S3

Male-body		S30

S2-GMR		S31

S2		S32

S2		S33

Kc		S34

Kc		S35

Kc		S4

Female-body		S5

Disc		S6

Embryo		S7

Embryo		S8

S2		S9

Embryo		SRR001337

Head		SRR001338

Head		SRR001339

Head		SRR001340

Head		SRR001341

Head		SRR001342

Head		SRR001343

Head		SRR001344

Head		SRR001345

Head		SRR001346

Head		SRR001347

Head		SRR001348

Head		SRR001349

Head		SRR001664

Head		SRR010951

Ovary		SRR010952

Ovary		SRR010953

Ovary		SRR010954

Ovary		SRR010955

Ovary		SRR010956

Ovary		SRR010957

Ovary		SRR010958

Ovary		SRR010959

Ovary		SRR010960

Ovary		SRR014268

Embryo		SRR014269

Embryo		SRR014270

Embryo		SRR014271

Embryo		SRR014272

Embryo		SRR014273

Ovary		SRR014274

Ovary		SRR014275

Ovary		SRR014276

Ovary		SRR014277

Ovary		SRR014278

Ovary		SRR014279

Ovary		SRR014280

Ovary		SRR014281

Ovary		SRR014282

Ovary		SRR023197

S2		SRR023399

S2		SRR023400

S2		SRR023402

S2		SRR023407

S2		SRR029028

S2		SRR029029

S2		SRR029030

S2		SRR029031

S2		SRR029032

S2		SRR029033

S2		SRR029608

Head		SRR029633

Head		SRR030145

gb3		SRR031692

Head		SRR031693

Head		SRR031694

Head		SRR031696

Head		SRR031697

Head		SRR031698

Head		SRR031699

Head		SRR031700

Head		SRR031701

Head		SRR031702

Head		SRR031703

Head		SRR031704

Head		SRR032092

S2		SRR032093

S2		SRR032094

S2		SRR032095

S2-NP		SRR032096

S2-NP		SRR032152

Head		SRR060643

Testis		SRR060644

Ovary		SRR060645

Testis		SRR060646

Ovary		SRR060647

Ovary		SRR060648

Ovary		SRR060649

Ovary		SRR060650

Testis		SRR060651

Ovary		SRR060652

Testis		SRR060653

Ovary		SRR065151

Ovary		SRR065152

Ovary		SRR065153

Ovary		SRR065154

Ovary		SRR065155

Ovary		SRR065800

Ovary		SRR065801

Ovary		SRR065802

Ovary		SRR065803

Ovary		SRR065804

Ovary		SRR065805

Ovary		SRR065806

Ovary		SRR065807

Ovary		SRR097865

S2-NP		SRR097866

S2-NP		SRR097867

S2-NP		SRR298536

Ovary		SRR298537

Ovary		SRR298711

Ovary		SRR298712

Ovary		SRR317110

Ovary		SRR317111

Ovary		SRR317112

Ovary		SRR317113

Ovary		SRR317114

Ovary		SRR317115

Ovary		SRR317116

Ovary		SRR317117

Ovary		SRR341115

S2		SRR341116

S2		SRR341117

S2		SRR341118

S2		SRR351332

Mixed-body		SRR351333

Mixed-body		T004

OSC		T005

CME-L1		V001

Embryo		V002

Embryo		V003

S2		V006

Female-body		V007

Head		V008

S2		V009

CME-L1		V010

ML-DmD20-C5		V011

Sg4		V012

Male-body		V013

Head		V014

DTT		V015

DreRFHV		V018

Kc167		V019

GM2		V020

S2-R+		V021

ML-DmD21		V022

ML-DmD32		V023

Head		V024

Kc167		V025

S2-R+		V026

1182-2H		V027

ML-DmD21		V028

CME-W1-Cl.8+		V029

ML-DmD9		V030

ML-DmD8		V031

GM2		V032

S1		V033

CME-W1-Cl.8+		V034

ML-DmD16-C3		V035

ML-DmD32		V036

ML-DmD20-C5		V037

S2		V038

S2		V063

Ovary		V0632

Ovary		V064

Ovary		V0642

Ovary		V065

Ovary		V0652

Ovary		V066

Ovary		V0662

Ovary		V067

S2-NP		V073

mbn2		V074

S3		V075

ML-DmBG1-C1		V076

ML-DmBG3-C2		V077

Head		V078

Head		V079

Head		V080

Head		V081

Embryo		V082

Embryo		V083

Male-body		V084

Female-body		V085

CME-W2		V086

Female-body		V088

Ovary		V0882

Ovary		V089

Ovary		V0892

Ovary		V090

Male-body		V091

fGS/OSS		V092

Male-body		V093

Male-body		V094

S2-R+		V095

S2-R+		V096

Ovary		V097

Ovary		V098

Ovary		V125

ML-DmD9		V126

CME-L1		V127

G2		V128

S3		V129

ML-DmBG1-C1		V130

ML-DmBG3-C2		V131

ML-DmD16-C3		V132

ML-DmD32		V133

Sg4		V134

ML-DmD8		V135

CME-W2		V136

Male-body		V137

Head		V138

Male-body		V139

Female-body		V140

Female-body		V141

Female-body		V142

Female-body		V144

OSC		V145

S2		V146

S1		V147

1182-2H		V148

mbn2		GSM1528798

follicle cells
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGA..........................................................................................................241181065.001810650000000001000000002038466150016309172623673212729981254244053283287157968222745214648647627941291100001541814800000000000000000000032154495200042934132201251917942485128125197794190000004916193290361311015838311131004604127101437800009257701917171910187595191664115948862218561021388000002001565776070444204842018275104008464803006709431523526310639181649992882570500213591991699473133465161154311663124960460636129897542764768123627100043010001992129115542621220196522315061130111628100001015010601072650572116217915552931747251220412111389953140038123334389623479282149651054921602383943690246411174310608267252133401241212674936841761138299534262338351521412
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTG...........................................................................................................23156653.00566530000000000000000000031032310911220878993308643843127126213114354102325015125196152965172600073862300000000000000000000018007500003204325116261232529165128412000000564480534360150562428626400000000004213262181001441021877607551754002571010000010011034756042031110688223436455600514014103761302432667443711520400000176332010654702145213322462871006734533566130339146175200100006784620182250500141716303070801110420000000300220008153752226115201878100362376755288432338894363659721674553204215201614165801383143152212300018010151560663579871401535782141227060
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGT............................................................................................................22142109.00421090000000000000000000053164709142321571381201630633102139682142141843948254570004030600000000000000000000020200210064214402462912511132464342140000007241806041171801693504456738000000000000700252226271231633068641800000600760209214012412271733179416802261100070652831314820248554430000091298270001712576551514513133107270401067581000100012911307533114001344238032300000696000010040001000122812221102822446296112000191622291731234222115262133010398117313291193004019351318011565542880340000200215226458225445574711531003404048
......................................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGA..........................................................................................................23130963.003096300003000010000000010611190004707671882014217722605844761211818746582497803971723000298080000000000000000000004310029292021325621261914407115314605772141675450000103314171980142355302202327110416439180000002220455803811641133183979825313253000000007001381690951011997768114114031140040234850451401862213865780000023235403241019251725647101231114473786315966797933621059200331229085660000271480119070004540000030400100001126167213121149306164000280408266334684779742499262282697691897860700647007941144253103000011003021014519157509480334020030
......................................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTG...........................................................................................................2216652.0066520000000000000000000011681030031126101657714101615383294112211896220001013100000000000000000000080013000322229022696751010372417000000912120300300000101022000000000010111015101113721055552450000000050046030108112340910005007111517565731512000001652050007514221291728812814220000000049530325310008436062030002180000010100000004280017783100015615012517563031278201928606936102032720063723200000001000140503373102389356194001020
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTG.............................................................................................................2116563.00656300000000000000000000416710420202422121115465112035234250789415000343750000000000000000000002000000011231018314122113920000001101000160204270300300000000003120095106363231688000009002009170100002602432002010130071210131700010011800000800010004231916381453418519350260001100016340467720008942077030001440000000000000001096012265262200022021719728408839260161952217241011014000254441101000100102451084633109289265199012110
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGT..........................................................................................................2415752.0057520000000000000000000010560020000000002818612635118390451583320000000000000000000000000001200010001034010353254034469000000000100135020127010116000000000000000513616342672727300000000000121101600115114280830000045411140002211600000261000000020851121441231132931100000000111102835000064170300200018510000001000000010690111203422100010014093112285813703223941031252031118400165122401000000100020195642887121276164200010
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGAT.........................................................................................................2511769.00176900000000000000000000006000000000000140002670120101127100000000000000000000000000001000000000040110417102330000000000020007402011202022000000000000000020164414200000000000171509000110304060000001712800001400000015000000010012601020432616224788600001810004202600002320600000140000000000000004232428414000001631282912518806164546510422300103319000000010002174459132010001010
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGAA.........................................................................................................2511672.0016720000000000000000000002200000000000003111034042321119000000000000000000000000000000000000001210042841221500000002004000110000020503500000200000000001152119690000000000015220120019111011030000002022400020200000050000000000012121815113011015412541000188008502000002010701000800000002000000064501210215000001524815011260261382451024064260096715000000000001544188131112000010
......................................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGT............................................................................................................2111597.00159700000000000000000000004001000000000010200330300111600000780000000000000000000000200000002379001932500313438000000002000000000001020610000000000000000000410002000000000100390200313070704000000712010001020000001100000003155431100010100010000110560000151402100000280000100000000005120101272000092898511311214120252601112065620041410000000000482627013193727000010
......................................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGAA.........................................................................................................2411452.00145200000100000000000000012000000000000050430450720333151100000000000000000000000000020000000124711421426032520462000000402110401000012301001000000000000000151852211530000000000010409000100603040000000010101000100000002130110001003280134928549488133100015200840310000131070000060000000000000004302311262210000915864101312311113871319036190039841000000000000414421256000000
..................................................................................................................................................TCGCGCCTGTATCTTGCTGAAC...............................................................................................................................................................2211231.0012310000010000000000000000510010000000014020002020100314300000000000000000000000000001000000000000047310217900000006004000000000000101100000011000000000014216121000000000002401000302022400000020301000000000000101000000000403611376607559191174900000000111002000001001000002000000000000000129804104715880000010010402006164111003500225414000000000001501341000009
......................................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGT..........................................................................................................2311046.00104600000000000000000000001500000000000030021214071121028000000000000000000000000000008000000000127101327200133800000020000001000002001043000000000000000220351101100000000200040100000101030000000011000001100000020000000100403012101001000000003007500007706000002700000001000000001501111400000292123260161170761702560393500651330000000000034184636193322000000
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGT..............................................................................................................201958.009580000000000000000000000400030008100000202013103000104010001011300000000000000000000010010100000300210022200000000100001000000000001200000000000000003040550121000000000003202002120917013000000311000000000000002000010011175600401120000000000200510100061101000000100000000000000003171101230000042373764011920506104101212003230000000000055224591171818000000
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGAATC.......................................................................................................271820.008200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000612208000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGC..........................................................................................................241711.007110000000000000000000010400000000000012021115341113037169720000000000000000000000000000000010000001002000000200000000000003128010010060930000000000000001004610456000000000003300000000000000000000001000001300000103000000012111132613000000000011027100021010000020000000000000001370014130000043092100711002277139014180068200000000000815821065000000
..................................................................................................................................................TCGCGCCTGTATCTTGCTGAACC..............................................................................................................................................................231660.00660000010000400000100000001000100000000003000200010035100000000000000000000000000000000000000020043120077000000000060501000010201000000000000000000011100169200000000000320201010201204000000402100000000000060000100000484213343844228822450000000016120400000100201000000000001000000022301112217000000100050000415496021007224000000000002542201000000
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGATC........................................................................................................261615.006150000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000120000000457155000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGAT.........................................................................................................241605.006050000000000000000000000500000000000000000002030101040000000000000000000000000000000001000021910235151022392000000200300030000103000110000000000000000003121250000000000005301000603000000000002002000000000000400000000001030126151036283910018000200220000910500000900000000000000004020121110000516980251480141813150241500211100000000000051486242000000
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTT...........................................................................................................231519.005190000000000000000000010700000000000009180330000202220000000000000000000000000000000000000000030023110001200000000000000301010101061000000000000110030486030100000100000020211010200000001000100110010000000010000000000021400254211200000000104022500001040200001500000000000000021000022600000913514025112032801100151500171930000000000012362451662000000
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGA............................................................................................................221307.00307000000000000000000000000000000000000000020002000000100000000000000000000000000000000000000010011100000100000000100000100000001002000000000000000000010032000000000000150400010114000120100011006000100000000940020000002210024100200000000005002100002102000001000000000000000060001030000114125131104100140170530003100000001000754131464000000
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGG..........................................................................................................241267.0026700000000000000000000000000000000000120002050000016250000000000000000000000000000020001000001200200000030000000000000051010002000300000000000000000000003010000000000006601000101040000000010000000000000000101000000000000010212000000000052032000070020000040000000000000001300031200000314203411500572240420017310000000000515111752000000
......................................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGAATC.......................................................................................................261261.00261000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000019170000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGAC.........................................................................................................251189.00189000000000000000000000010000000000000100001000010124000000000000000000000000000000000000000000010100002000000000000001000000100001000000000000000000211000000000000000200000000000000000000001100000000000000000000000000002652711304110000101001001000001002000001000000000000000030001000000000010311001000101000050000000000002442020000000
..................................................................................................................................................TCGCGCCTGTATCTTGCTGAA................................................................................................................................................................211182.001820000200000000000000001000000000000000000000011010000000010000000000000000000000000000000000100302000070000000000000000000000010200000000000000000000000130000000000002201000102000000000111001000400000000000000000001021014361572000000000200000000000000001000000000000000618012101240000002020100000012301400560000000000002200100000000
....................................................................................................................................................................................................GTTGAGCAAAATTTCAGGTGTGT............................................................................................................231164.0016400000000000000000000000000000000000100000100000110200000000000000000000000000000000000000011002020000200000000002000000000000000000000000000000010101110020000000000010000000000000000000000000000010000000000000000010000124020100000000100000000010000000100000000000000007010101000002513039530019015070005151000000000001331221000000
......................................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGC..........................................................................................................231147.0014700000000000000000000001000000000000010100140101152100000000000000000000000000000000001000000100500000010000000000000024000002000310000000000000000002100011000000000000101000000000100000000000000000000000000000000000000000010000000000000004000010000000020000000000000000600010000000223103650007011903100110000000000000100011000000
.......................................................................................................................................................................................................GAGCAAAATTTCAGGTGTGTGA..........................................................................................................221132.001320000000000000000000000100000000000001000000000000120000002000000000000000000000000000000000000000000000000000000100000000000010100000000000000000000010000000000000001401000301110000000000000000000000000300300000000010054348230000000001001000000010000010000000000000000300110000000030001824001205307000272000000000001012121000000
......................................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGAC.........................................................................................................241132.0013200000000000000000000002000000000000000000000010001310000000000000000000000000000000030000110002010010600000000000000000000010000000000000000000000000001151000000000000000000000000000000000000000000000000200000000000000144671017000021000100000000000000003000000000000000000012010000020210530011101305100503000000000000102100000000
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTA...........................................................................................................231129.001290000000000000000000000100000000000001010001000100020000000000000000000000000000000000000001100000001210000000000100000000000000000000000000000001111420010000000000001201000100030000000000000000010000000000000000000020011100020000100011001000001030000010000000000000000000000000000242301220023114031007120000000000051832441001000
......................................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGATC........................................................................................................251123.00123000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010122000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGC............................................................................................................221121.00121000000000000000000000000000000000000100000001000003000000000000000000000000000000000000010000000000001000000000000000100000000010000000000000000000000000000000000000010100000001010000000000000000000000000000000000010100000000000000000000100002201000001000000000000000012100100000004566030001441010041002200000000000031352126000000
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTC...........................................................................................................231120.00120000000000000000000000000000000000000002100000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100111000000000000000000000000000000000000000000000010000000000000100001002021000000000001101000004001000003000000000000000000001000000031360101000210111062001010000000000041681733000100
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGAAT........................................................................................................261114.0011400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000001000001010100000000000000000000010000000000000000000706360400005019001000000001000000000000000000000000000000000000000200001000200102000000000000000000201000000000
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGAG.........................................................................................................251113.00113000000000000000000000000000000000000100000000000013000001510400000000000000000000000000000000000010000000000000000100000000000000000000000000000000000001000000000000001001000000000000000000002000000000000000000000001000054627230000000000000000001000000010000000000000000100020000000021001002000310205200020000000000000400012000000
......................................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGAG.........................................................................................................24197.00970000000000000000000000000000000000000000001000000000000057300000000000000000000000000000100000101000020000000100200000000000000000000000000000000001100002000000000000001000000000010000000000000010000000000000000000000154234010000000011000000010000000020000000000000000300001100000112001701010101202300020000000000001000100000000
......................................................................................................................................................................................................TGAGCAAAATTTCAGGTGTG.............................................................................................................20194.00940000000000000000000000000000000000100000001010001010000023100000000000000000000000000000000100211000040000000000000000000000000010000000000001000000110100000000000001000000000000100000000000000000000000000000000000002000000000000000000023000033000000020000000000000000000000000000221701100000003002001000000000000041230463000000
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGTT.........................................................................................................25191.009100000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000410000000000000100000000000000000000000000000000000000000000000010000001000000000000000000000000000000000000000000100200000100000000000010000200000000300000000000000001000000000002221021000230040710030100000000000319113310000000
..................................................................................................................................................TCGCGCCTGTATCTTGCTGA.................................................................................................................................................................20189.0089000000000000000000000000000000000000000000001000001000001000000000000000000000000000000000020030100000000000010000000000000001001000000000000000000100110000000000000210000010000000000000010000000000000000000000000010005121912000000000102100000001000000000000000000000090001231000021210000000002101200130000000000000301303000000
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTG...............................................................................................................19186.0086000000000000000000000000000000010100111000000001000000004400000000000000000000000000000000000000000003000000000000000100000000000000000000000000021101000100000000000000000010011000000000000000010030000000002000000422000120001000000000000000000000000003000000000000000000001000000030420001000000301000011000000000001383312000000
......................................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGAAT........................................................................................................25179.00790000000000000000000000000000000000000000001000000000100000000000000000000000000000000000010100100000060000000000100000000101000000000000000000000000000000000000000000003000000000000000000000000000000000100000000001000172212110000136000000000000000000000000000000000000010000010000013000020003100300200020000000000000220001000000
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGG............................................................................................................22169.00690000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000101000000020700000000000000000000000000000000000000000000000000000000000000030000000000000000000000001000000100000514910020080000203400000000000000001200000000000
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTTT..........................................................................................................24163.0063000000000000000000000040000000000000000001000000004000000000000000000000000000000000000000000010000000000000000000001000000000021000000000000000000001000000000000000110000020000000000000000000000100000010000000000000102220000000000003001000000000000001000000000000000100000010000022050101020100102000510000000000000140000000000
......................................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGG..........................................................................................................23151.0051000000000000000000000000000000000000000000100000600000000000000000000000000000000000000000010020000101000000000000000001000000000000000000000000000000000000000000000100100100000000000000000000000010000010000000000000000001000000000000100000002101000001000000000000000000001000000012010810010000000000221000000000002100012000000
.........................................................................................................................................................................GC-TGCCA-TTATGGCCAACGA-TCCGG..................................................................................................................................25149.00490000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000100010100000000020010000000000000000000000000000000000000000001000000000000000000000000000000000001003006542000000004300000000000000000000000000000000100001000000000000100000000000000000000000000000000000000000
......................................................................................................................................................................................................TGAGCAAAATTTCAGGTGT..............................................................................................................19142.0042000000000000000000000000000000000000000000000000000000002210000000000000000000000000000010001000410012000000000000000000000100000000000000000000000000000000000000000010000220100010000001000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000010230100000000200000000000000000001420010000000
......................................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGTT.........................................................................................................24139.00390000000000000000000000200000000000000000100001001000000000000000000000000000000030000000000100111000010000000000000010000000000000000000000000001000000000000000000002000000000000000000000000000000000000010000000000000010000100000000000000000000000000000000000000000000100000100000000000000000001003001000000000000000200010000000
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGATT........................................................................................................26139.0039000000000000000000000000000000000000000100000000000000000000000000000000000000000000000001000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000005030502000010000000000000000000000000000000000000000000000000020010011000000001000012000000000000810001000000
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTATC.........................................................................................................25138.003800000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002711000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGT................................................................................................................18137.0037000000000000000000000000000020000200000000000000000000000000000000000000000000000000000000000010001200000000000000000000001000200000000000000000010001100000000000000000000000020003000000000000000000000000000000000000100330100000000001000000000000000000000000000000000010000000000001200000020000100100000000000000001000000000000
......................................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGA............................................................................................................21133.0033000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000100000100000000000000000000000000000000000000000000000000000000000000110100030500010000100000000000000000000000000000001000010000000000000000000000100000000000000000000000000000000000010110210011000001200000000000000000010101000000
......................................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTT...........................................................................................................22133.0033000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000100000100026000000010000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000001000002000000000000000000000000000000000000020000302010000002100100000010000001000110000000
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGTA.........................................................................................................25129.0029000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000100000000100000000000000000000000000000000000000000001010000000010000001000000000000002000000000000000000000000000000010000000001002100000000000000002560100000000
....................................................................................................................................................................................................GTTGAGCAAAATTTCAGGTGTG.............................................................................................................22127.0027000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000010000003000000000000000000000000000000000000000000000000000100000000000020000002000000000000000000000000000000002000000101000110000000000000000100000000000000000000000000000000000000000010230000000000100000010000000000000110000000000
droSim2
C--AGTGTT--------------AGATGATAC--T----------------TAA-------------ATGGTGATTAATTTC------GTCCTGGCTGACAC----T-------TAAGTCCT-----TT--GGCGGCACATTTCATTCGCGCCTGTATCTTGCTGAACCGC-TGCCA-TCATGGCCAACGA-TCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATGTGTTTAGCATTCATCGGAGGAT---TTTCC-------AGTCT------GGTAAA-----GTGATGGGGCTTGAATGGAGATCATTTCCGGTGAGTATT--SizeHit CountTotal NormTotalM023

Head		M024

Male-body		M025

Embryo		M053

Female-body		O001

Testis		O002

Head		SRR553485

Ovary		SRR553486

Ovary		SRR553487

Ovary		SRR553488

Ovary		SRR618934

Ovary		V044

Embryo		SRR902008

Ovary		SRR902009

Testis		SRR1275487

Male larvae		SRR1275485

Male prepupae		SRR1275483

Male prepupae
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGA..........................................................................................................24115466.00154661552057114328133273233741149111698593746000
......................................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGA..........................................................................................................2313906.0039069510201297329171110265301893100000
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTG...........................................................................................................2312130.00213028917394761267571634122200000
..................................................................................................................................................TCGCGCCTGTATCTTGCTGAACC..............................................................................................................................................................2311945.001945347371527001772401300000
..................................................................................................................................................TCGCGCCTGTATCTTGCTGAAC...............................................................................................................................................................221822.0082230747270100558230210801000
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGT............................................................................................................221587.00587268301749201053331127600000
......................................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTG...........................................................................................................221351.003511468631626325719200000
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTG...............................................................................................................191302.0030277172203814700001000000
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTG.............................................................................................................211265.0026578183971685000051700000
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGG..........................................................................................................241232.00232435169100001101200000
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGT................................................................................................................181208.0020800003217400002000000
......................................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGAA.........................................................................................................241162.001621205200367216130600000
..................................................................................................................................................TCGCGCCTGTATCTTGCTGA.................................................................................................................................................................201116.00116839700074230010000
...................................................................................................................................................CGCGCCTGTATCTTGCTGAACC..............................................................................................................................................................221111.001111109600022000000000
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGT..........................................................................................................24195.00952038900200015101000
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGT..............................................................................................................20187.00871001127000002100000
......................................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGG..........................................................................................................23179.0079836700000000100000
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGAA.........................................................................................................25179.0079102600102218901001000
..................................................................................................................................................TCGCGCCTGTATCTTGCTGAA................................................................................................................................................................21174.007417050001722940000000
......................................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGT............................................................................................................21173.00733780422010000100000
......................................................................................................................................................................................................TGAGCAAAATTTCAGGTGTG.............................................................................................................20164.006425220131300000000000
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGC............................................................................................................22161.0061546100000000000000
......................................................................................................................................................................................................TGAGCAAAATTTCAGGTG...............................................................................................................18155.0055617063500000000000
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGG............................................................................................................22141.0041326300000000000000
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGC..........................................................................................................24138.0038505000021112300000
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGAT.........................................................................................................25127.0027101900000010600000
......................................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGT..........................................................................................................23125.0025172100000000500000
......................................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGAT.........................................................................................................24123.0023123400000110200000
......................................................................................................................................................................................................TGAGCAAAATTTCAGGTGT..............................................................................................................19123.0023000041900000000000
....................................................................................................................................................GCGCCTGTATCTTGCTGAACC..............................................................................................................................................................21118.0018121400001000000000
..................................................................................................................................................TCGCGCCTGTATCTTGCTGG.................................................................................................................................................................20118.0018161100000000000000
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGA............................................................................................................22113.001320210033200000000
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTT...........................................................................................................23112.001241000003000400000
......................................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGG............................................................................................................21110.001081100000000000000
......................................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGC............................................................................................................2119.00981000000000000000
..................................................................................................................................................TCGCGCCTGTATCTTGCTGAACA..............................................................................................................................................................2319.00931200012000000000
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGG.................................................................................................................1718.00800000001016000000
......................................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGC..........................................................................................................2318.00840000000000400000
......................................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGAG.........................................................................................................2418.00800000004010300000
........................................................................................................................................................................CGC-TGCCA-TCATGGCCAACGA-TCCGGT.................................................................................................................................2718.00821410000000000000
.......................................................................................................................................................................................................GAGCAAAATTTCAGGTGTGTGA..........................................................................................................2217.00700010000000600000
......................................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGAGT........................................................................................................2517.00700500000010100000
......................................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGA............................................................................................................2116.00610000022000100000
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGAC.........................................................................................................2516.00640200000000000000
.........................................................................................................................................................................GC-TGCCA-TCATGGCCAACGA-TCCGG..................................................................................................................................2516.00600300010000200000
..................................................................................................................................................TCGCGCCTGTATCTTGCTGAAA...............................................................................................................................................................2216.00651000000000000000
..................................................................................................................................................TCGCGCCTGTATCTTGCTGAACT..............................................................................................................................................................2315.00530200000000000000
......................................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGAC.........................................................................................................2415.00500300000100100000
......................................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGAAT........................................................................................................2515.00520300000000000000
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTTGA...........................................................................................................2314.00400000012010000000
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGAG.........................................................................................................2514.00400000100000300000
.........................................................................................................................................................................GC-TGCCA-TCATGGCCAACGA-TCCG...................................................................................................................................2413.00300200010000000000
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTA...........................................................................................................2313.00310000000001100000
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTC...........................................................................................................2313.00310000010000100000
..................................................................................................................................................TCGCGCCTGTATCTTGCTGAACCG.............................................................................................................................................................2413.00301200000000000000
...................................................................................................................................................CGCGCCTGTATCTTGCTGAAC...............................................................................................................................................................2113.00310200000000000000
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGACT........................................................................................................2612.00210100000000000000
..................................................................................................................................................TCGCGCCTGTATCTTGCTGAACCT.............................................................................................................................................................2412.00210100000000000000
......................................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTA...........................................................................................................2212.00210000000000100000
..................................................................................................................................................TCGCGCCTGTATCTTGCTG..................................................................................................................................................................1912.00210010000000000000
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGATTT.......................................................................................................2712.00220000000000000000
......................................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGAGA........................................................................................................2512.00200001000100000000
.........................................................................................................................................................................................................GCAAAATTTCAGGTGTGTGA..........................................................................................................2012.00200010001000000000
..........................................................................................................................................................................................................CAAAATTTCAGGTGTGTGA..........................................................................................................1912.00200000001010000000
...........................................................................................................................................................................................................AAAATTTCAGGTGTGTGA..........................................................................................................1812.00200000000001100000
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGAT...........................................................................................................2312.00220000000000000000
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGG..............................................................................................................2012.00211000000000000000
......................................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTT...........................................................................................................2211.00110000000000000000
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGAGT........................................................................................................2611.00100000000000100000
......................................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGTT.........................................................................................................2411.00110000000000000000
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTTT..........................................................................................................2411.00100010000000000000
.........................................................................................................................................................................................................GCAAAATTTCAGGTGTGTG...........................................................................................................1911.00100000000001000000
droSec2
A--CTTGCT--------------AC-T------------------------TAA-------------ATGGTGATTCATTTC------GTCCTGGCTGACAA----C-------CAAGTCCT-----TT--GGCGGCACATTTCATTCGCGCCTGTATCTTGCTGAACCGC-TGCCA-TCATGGCCAACGA-TCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATGTGTTTAGCATTCATCGGAGGAT---TTATC-------AGACT------GG---------------------------TGATCATTTCCGGTGAGTATTCASizeHit CountTotal NormTotalM054

Female-body		V113

Male-body		V114

Embryo		V115

Head
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGA..........................................................................................................24119236.00192362724012121942758
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTG...........................................................................................................2316199.006199132222221101735
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGT............................................................................................................2215249.00524916728862581938
......................................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGA..........................................................................................................2313346.003346726461921707
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGT..........................................................................................................241888.008882044769352
......................................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTG...........................................................................................................221837.0083735304174324
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTG.............................................................................................................211731.007312535241313
......................................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGT............................................................................................................211260.00260211137119
..................................................................................................................................................TCGCGCCTGTATCTTGCTGAACC..............................................................................................................................................................231186.00186221820
......................................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGT..........................................................................................................231173.00173682679
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGT..............................................................................................................201138.00138269661
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGAA.........................................................................................................251130.001307337218
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGA............................................................................................................221106.001063275719
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGAT.........................................................................................................251103.001033473419
..................................................................................................................................................TCGCGCCTGTATCTTGCTGAAC...............................................................................................................................................................22178.007846608
......................................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGAA.........................................................................................................24160.0060483513
......................................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGAT.........................................................................................................24140.0040372010
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGG..........................................................................................................24132.003216214
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTT...........................................................................................................23126.002601628
......................................................................................................................................................................................................TGAGCAAAATTTCAGGTGTG.............................................................................................................20123.002325214
......................................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGAG.........................................................................................................24122.002231153
.......................................................................................................................................................................................................GAGCAAAATTTCAGGTGTGTGA..........................................................................................................22119.00193583
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGC..........................................................................................................24118.00180738
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTTGA...........................................................................................................23113.00130094
......................................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGA............................................................................................................21113.00130292
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTC...........................................................................................................23112.00120345
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGC............................................................................................................22112.00120903
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGAG.........................................................................................................25111.00110191
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGTT.........................................................................................................25110.00101612
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTA...........................................................................................................23110.00100442
...................................................................................................................................................CGCGCCTGTATCTTGCTGAACC..............................................................................................................................................................2218.0080080
......................................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGAC.........................................................................................................2416.0060321
.......................................................................................................................................................................................................GAGCAAAATTTCAGGTGTGTG...........................................................................................................2116.0062220
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGAAT........................................................................................................2615.0050221
......................................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGAGT........................................................................................................2515.0050131
........................................................................................................................................................................CGC-TGCCA-TCATGGCCAACGA-TCCGGT.................................................................................................................................2714.0040031
......................................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGC..........................................................................................................2314.0040301
......................................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGTT.........................................................................................................2414.0040202
......................................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGG..........................................................................................................2314.0040022
..................................................................................................................................................TCGCGCCTGTATCTTGCTGA.................................................................................................................................................................2014.0041102
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGG............................................................................................................2214.0040301
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGA..............................................................................................................2014.0040040
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGTA.........................................................................................................2514.0040310
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTG...............................................................................................................1914.0041012
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGATT........................................................................................................2614.0040112
..................................................................................................................................................TCGCGCCTGTATCTTGCTGAA................................................................................................................................................................2114.0040130
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGCT.........................................................................................................2513.0031200
.......................................................................................................................................................................................................GAGCAAAATTTCAGGTGTGT............................................................................................................2013.0031101
....................................................................................................................................................GCGCCTGTATCTTGCTGAACC..............................................................................................................................................................2113.0030030
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGAC.........................................................................................................2513.0030030
......................................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGCTT........................................................................................................2512.0020002
..................................................................................................................................................TCGCGCCTGTATCTTGCTGAACA..............................................................................................................................................................2312.0021010
......................................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGAGA........................................................................................................2512.0020011
......................................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGAAC........................................................................................................2512.0020011
......................................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTT...........................................................................................................2212.0020101
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTAT..........................................................................................................2412.0020101
..................................................................................................................................................TCGCGCCTGTATCTTGCTGAACCG.............................................................................................................................................................2412.0020020
...................................................................................................................................................CGCGCCTGTATCTTGCTGAAC...............................................................................................................................................................2112.0020020
......................................................................................................................................................................................................TGAGCAAAATTTCAGGTGT..............................................................................................................1912.0021100
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTT.............................................................................................................2112.0021001
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGAA...........................................................................................................2312.0020020
droYak3
TCCAGTGCT--------------AG-TCATAT--C----------------TAC-------------TTGGTGATTCATTT-------GTCCTGGTTGTG-T----C-------CAAGTCCT-----TT--GGCGGCATATTTCATTCGCGCCTGTATCTTGCTGAACCGT-TACAA-TTATGGTCTTCGA-TCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATTTGTTTAGCATTCATCGGAGGAT---TTGCA-------AAGTT------GGTAAA-----GCAATGCGGCTTGGGTGGAGATCCTTAT---------CT--SizeHit CountTotal NormTotalM026

Head		M043

Female-body		M056

Embryo		V046

Embryo		V052

Head		V058

Head		V120

Male-body		SRR1275488

Male larvae		SRR1275486

Male prepupae		SRR1275484

Male prepupae		GSM1528802

follicle cells
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGA..........................................................................................................2419353.0093531642925112419159384339810234
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTG...........................................................................................................2312672.002672102574664826913412540000
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGT............................................................................................................2211142.0011425935216581507670100
..................................................................................................................................................TCGCGCCTGTATCTTGCTGAACC..............................................................................................................................................................2311031.00103110410906100010000
......................................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGA..........................................................................................................2311024.00102439130231321472470000
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGT..........................................................................................................241396.00396132268452970005
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTG.............................................................................................................211296.00296641104135171090010
......................................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTG...........................................................................................................221198.001983393237818610000
..................................................................................................................................................TCGCGCCTGTATCTTGCTGAAC...............................................................................................................................................................221180.0018059411420010000
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGAT.........................................................................................................25193.009325221412470000
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGAA.........................................................................................................25180.008001223626310000
......................................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGT............................................................................................................21146.00461120145230000
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGT..............................................................................................................20138.0038020033300000
......................................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGT..........................................................................................................23136.0036041246190000
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGC..........................................................................................................24125.002501770730000
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGC............................................................................................................22121.0021211700010000
......................................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGAA.........................................................................................................24120.0020051100040000
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGTT.........................................................................................................25115.0015020001120000
......................................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGAT.........................................................................................................24115.001512801030000
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTG...............................................................................................................19114.001470600010000
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTT...........................................................................................................23114.001401113260000
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGAC.........................................................................................................25113.0013011200000000
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGG..........................................................................................................24112.001231330200000
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGA............................................................................................................22111.001101600220000
.......................................................................................................................................................................................................GAGCAAAATTTCAGGTGTGTGA..........................................................................................................2218.00805110010000
......................................................................................................................................................................................................TGAGCAAAATTTCAGGTGTG.............................................................................................................2017.00710600000000
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGATT........................................................................................................2615.00500000050000
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGAAT........................................................................................................2615.00501200020000
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGTTT........................................................................................................2614.00400001030000
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTC...........................................................................................................2314.00400200020000
......................................................................................................................................................................................................TGAGCAAAATTTCAGGTG...............................................................................................................1814.00430100000000
...................................................................................................................................................CGCGCCTGTATCTTGCTGAACC..............................................................................................................................................................2214.00402200000000
.......................................................................................................................................................................................................GAGCAAAATTTCAGGTGTGTG...........................................................................................................2113.00302001000000
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGAG.........................................................................................................2513.00300010020000
......................................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGAG.........................................................................................................2413.00300110010000
......................................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGAAT........................................................................................................2512.00201000010000
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTCT..........................................................................................................2412.00200000020000
...........................................................................................................................................................................................................AAAATTTCAGGTGTGTGA..........................................................................................................1812.00201100000000
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGTA.........................................................................................................2512.00200000110000
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGAT...........................................................................................................2312.00201000100000
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGA..............................................................................................................2012.00200000020000
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTA...........................................................................................................2312.00200000020000
..................................................................................................................................................TCGCGCCTGTATCTTGCTGAACCG.............................................................................................................................................................2412.00200200000000
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTTT..........................................................................................................2412.00200000200000
......................................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGATT........................................................................................................2512.00201000010000
..................................................................................................................................................TCGCGCCTGTATCTTGCTGA.................................................................................................................................................................2012.00220000000000
......................................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGG..........................................................................................................2312.00210010000000
......................................................................................................................................................................................................TGAGCAAAATTTCAGGTGT..............................................................................................................1912.00200000020000
..........................................................................................................................................................................................................CAAAATTTCAGGTGTGTGA..........................................................................................................1912.00200200000000
......................................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGA............................................................................................................2112.00200010010000
.........................................................................................................................................................................................................GCAAAATTTCAGGTGTGTGA..........................................................................................................2012.00201100000000
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGG............................................................................................................2212.00220000000000
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGAA...........................................................................................................2311.00100000010000
......................................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTC...........................................................................................................2211.00100100000000
droEre2
C--AGTGCT--------------AG-TGATAC--C----------------TAC-------------TTGGTGATTCATTT-------GTCCTTGCTGAA-C----A-------CGAGTCCT-----TT--GGCGGCATATTTCATTCGCGCCTGTATCTTGCTGAACCGT-TGCCA-TTATGGCCTACGA-TCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATTTGTTTAGCATTCATCGGACGAT------------------------------------------------------------------------------SizeHit CountTotal NormTotalM055

Female-body		M057

Embryo		V060

Head		V040

Embryo		V107

Male-body		V108

Head		GSM1528801

follicle cells
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGA..........................................................................................................24121613.002161383469934630947475908976
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTG...........................................................................................................2318697.0086974741481876942536460553
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGT............................................................................................................2214506.0045062493613354180422282
......................................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGA..........................................................................................................2313470.0034701718661535138212350
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGT..........................................................................................................2411310.001310485181349570427
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTG.............................................................................................................2111208.001208622342253347220
......................................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTG...........................................................................................................221897.00897741528602624580
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGAT.........................................................................................................251254.00254163829910818
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGAA.........................................................................................................251217.002173083694760
......................................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGT............................................................................................................211188.001882303187740
......................................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGT..........................................................................................................231175.00175602775850
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGT..............................................................................................................201118.00118101040760
......................................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGAA.........................................................................................................241100.001001143351280
..................................................................................................................................................TCGCGCCTGTATCTTGCTGAACC..............................................................................................................................................................231100.001001256182210
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTT...........................................................................................................23191.00913121615540
..................................................................................................................................................TCGCGCCTGTATCTTGCTGAAC...............................................................................................................................................................22171.00711621153250
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGA............................................................................................................22152.0052614118220
......................................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGAT.........................................................................................................24146.0046710218180
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTC...........................................................................................................23144.004402004380
......................................................................................................................................................................................................TGAGCAAAATTTCAGGTGTG.............................................................................................................20143.0043740011210
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTA...........................................................................................................23139.003901116300
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGG..........................................................................................................24137.0037511118110
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGC..........................................................................................................24133.0033104113140
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGTT.........................................................................................................25126.002611009150
.......................................................................................................................................................................................................GAGCAAAATTTCAGGTGTGTGA..........................................................................................................22124.00248002860
......................................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGC..........................................................................................................23120.002000033140
..................................................................................................................................................TCGCGCCTGTATCTTGCTGA.................................................................................................................................................................20116.00163020290
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGATT........................................................................................................26114.00141010813
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGAC.........................................................................................................25112.00125210310
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTTT..........................................................................................................24111.00111000280
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGC............................................................................................................2219.0090500130
.......................................................................................................................................................................................................GAGCAAAATTTCAGGTGTGTG...........................................................................................................2119.0095010030
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGTA.........................................................................................................2519.0091010430
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTG...............................................................................................................1918.0081000160
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTTGA...........................................................................................................2318.0083000140
......................................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGG..........................................................................................................2317.0071000060
..................................................................................................................................................TCGCGCCTGTATCTTGCTGAA................................................................................................................................................................2117.0072010220
......................................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTT...........................................................................................................2217.0071002130
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTT.............................................................................................................2116.0061000230
......................................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGAC.........................................................................................................2416.0061301010
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGAAT........................................................................................................2616.0060000330
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGAG.........................................................................................................2516.0061000320
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTCT..........................................................................................................2415.0050000050
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTTGA.........................................................................................................2515.0050000140
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGA..............................................................................................................2015.0050000050
......................................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGA............................................................................................................2115.0050000320
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGACT........................................................................................................2614.0040000220
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGTTT........................................................................................................2614.0040000220
...........................................................................................................................................................................................................AAAATTTCAGGTGTGTGA..........................................................................................................1814.0040200020
......................................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGTT.........................................................................................................2414.0040000040
........................................................................................................................................................................................................AGCAAAATTTCAGGTGTGTGA..........................................................................................................2114.0042002000
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTTG............................................................................................................2214.0042000020
......................................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGAG.........................................................................................................2414.0040300100
.......................................................................................................................................................................................................GAGCAAAATTTCAGGTGTGT............................................................................................................2013.0030000120
......................................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGAAT........................................................................................................2513.0030000120
......................................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTTT..........................................................................................................2313.0031000110
......................................................................................................................................................................................................TGAGCAAAATTTCAGGTGT..............................................................................................................1913.0031000110
......................................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTA...........................................................................................................2213.0030100110
dp5
T--GGTGCT-----------------------------------------------------------TGGAGATTT---------------TCCTTGACAT----C-------------CTACCGTGT--GCTGGCATATTTCATTCGCGCCTGTATCTTGCTGAACCGT-AGCCA-TAATGGTCTTTCATCCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATTTGTTAAGCAATCTTCA------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM022

Male-body		M040

Female-body		M059

Embryo		M062

Head		V043

Embryo		V051

Head		V112

Male-body		SRR902010

Ovary		SRR902011

Testis		SRR902012

CNS imaginal disc
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGA..........................................................................................................2419361.0093610127120019629985172413221528
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGT............................................................................................................2213077.0030771926202811402351490110
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTG...........................................................................................................2312590.002590051125866536213993418
......................................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGA..........................................................................................................2311714.00171403732641957193390220
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTG.............................................................................................................2111130.00113022789414133104498061
......................................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTG...........................................................................................................221352.0035201252064930121010
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGT..........................................................................................................241287.002870671553022148000
......................................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGT............................................................................................................211221.0022111105422079000
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGT..............................................................................................................201181.00181031201011127000
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGC............................................................................................................22188.0088025826011000
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGAA.........................................................................................................25183.008303420010116101
..................................................................................................................................................TCGCGCCTGTATCTTGCTGAACC..............................................................................................................................................................23179.0079014501710213
......................................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGT..........................................................................................................23162.0062016242434000
..................................................................................................................................................TCGCGCCTGTATCTTGCTGAAC...............................................................................................................................................................22161.006113173335134
......................................................................................................................................................................................................TGAGCAAAATTTCAGGTGTG.............................................................................................................20150.0050026611412000
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTT...........................................................................................................23146.0046121201021000
......................................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGAA.........................................................................................................24142.0042017110437000
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGC..........................................................................................................24124.002400251133000
.......................................................................................................................................................................................................GAGCAAAATTTCAGGTGTGTGA..........................................................................................................22123.002301820102000
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGG..........................................................................................................24120.00200060806000
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGA............................................................................................................22119.00190360109000
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGAT.........................................................................................................25117.00170230318000
......................................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGAG.........................................................................................................24114.00140531410000
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTA...........................................................................................................23110.00100421102000
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTG...............................................................................................................19110.00100640000000
......................................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGAT.........................................................................................................2419.0090310113000
.......................................................................................................................................................................................................GAGCAAAATTTCAGGTGTGTG...........................................................................................................2119.0090900000000
.......................................................................................................................................................................................................GAGCAAAATTTCAGGTGTGT............................................................................................................2018.0080600002000
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTTT..........................................................................................................2417.0070511000000
...................................................................................................................................................CGCGCCTGTATCTTGCTGAAC...............................................................................................................................................................2117.0070700000000
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGAC.........................................................................................................2517.0070150001000
...................................................................................................................................................CGCGCCTGTATCTTGCTGAACC..............................................................................................................................................................2217.0070160000000
....................................................................................................................................................................................................GTTGAGCAAAATTTCAGGTGTGTGA..........................................................................................................2517.0070311200000
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGAG.........................................................................................................2517.0070021202000
......................................................................................................................................................................................................TGAGCAAAATTTCAGGTGT..............................................................................................................1916.0060201021000
....................................................................................................................................................................................................GTTGAGCAAAATTTCAGGTGTGTG...........................................................................................................2416.0060200301000
..................................................................................................................................................TCGCGCCTGTATCTTGCTGAA................................................................................................................................................................2115.0050400001000
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGTT.........................................................................................................2515.0050110003000
......................................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTT...........................................................................................................2214.0040300100000
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTC...........................................................................................................2314.0040040000000
..................................................................................................................................................TCGCGCCTGTATCTTGCTGA.................................................................................................................................................................2014.0040200002000
......................................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGAC.........................................................................................................2414.0040120001000
......................................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGC............................................................................................................2113.0030021000000
..................................................................................................................................................TCGCGCCTGTATCTTGCTGAACCG.............................................................................................................................................................2413.0030100010010
......................................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGC..........................................................................................................2313.0030000021000
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTT.............................................................................................................2112.0020200000000
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGATT........................................................................................................2612.0020100001000
....................................................................................................................................................................................................GTTGAGCAAAATTTCAGGTGTGTGAA.........................................................................................................2612.0020110000000
...................................................................................................................................................CGCGCCTGTATCTTGCTGAA................................................................................................................................................................2012.0020200000000
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGAAT........................................................................................................2612.0020100001000
......................................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGG..........................................................................................................2312.0020000110000
......................................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTC...........................................................................................................2212.0020010010000
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGG............................................................................................................2212.0020100010000
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGT................................................................................................................1812.0020100010000
..................................................................................................................................................TCGCGCCTGTATCTTGCTG..................................................................................................................................................................1912.0020100000010
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTA.............................................................................................................2112.0020020000000
........................................................................................................................................................................................................AGCAAAATTTCAGGTGTGTGA..........................................................................................................2112.0020100100000
..........................................................................................................................................................................................................CAAAATTTCAGGTGTGTT...........................................................................................................1811.0010100000000
......................................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGTA.........................................................................................................2411.0010100000000
droPer2
T--GGTGCT-----------------------------------------------------------TAGAGATTT---------------TCCTTGACAT----C-------------CTACCGTGT--GCTGGCATATTTCATTCGCGCCTGTATCTTGCTGAACCGT-AGCCA-TAATGGTCTTTCATCCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATTTGTTAAGCAATCTTCA------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM021

Embryo		M042

Female-body		V042

Embryo		V050

Head		V057

Head		V111

Male-body
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGA..........................................................................................................2414037.004037181545663608082131
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGT............................................................................................................2212186.002186811440221868935
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTG...........................................................................................................2311238.001238763193123220632
..................................................................................................................................................TCGCGCCTGTATCTTGCTGAACC..............................................................................................................................................................231842.0084283224121
......................................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGA..........................................................................................................231725.0072564013053202294
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTG.............................................................................................................211550.005504445068167217
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGT..........................................................................................................241289.002890392170186
..................................................................................................................................................TCGCGCCTGTATCTTGCTGAAC...............................................................................................................................................................221190.0019018510130
......................................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTG...........................................................................................................221180.0018011426204673
......................................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGT............................................................................................................211115.00115081115243
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGT..............................................................................................................201113.00113060145835
...................................................................................................................................................CGCGCCTGTATCTTGCTGAACC..............................................................................................................................................................22177.00777511000
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGAA.........................................................................................................25146.004632312017
......................................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGT..........................................................................................................23142.00420325725
..................................................................................................................................................TCGCGCCTGTATCTTGCTGAACCG.............................................................................................................................................................24125.00252500000
......................................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGAA.........................................................................................................24123.0023232565
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGAT.........................................................................................................25117.0017120248
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTG...............................................................................................................19113.0013800140
......................................................................................................................................................................................................TGAGCAAAATTTCAGGTGTG.............................................................................................................20113.0013221035
..................................................................................................................................................TCGCGCCTGTATCTTGCTGAA................................................................................................................................................................21111.0011820100
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTT...........................................................................................................23110.0010011053
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGA............................................................................................................22110.0010000145
......................................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGAG.........................................................................................................2419.009011016
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGG..........................................................................................................2419.009700011
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGC............................................................................................................2219.009000144
......................................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGAT.........................................................................................................2418.008101042
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGC..........................................................................................................2417.007000151
.......................................................................................................................................................................................................GAGCAAAATTTCAGGTGTGTGA..........................................................................................................2215.005032000
.....................................................................................................................................................CGCCTGTATCTTGCTGAACC..............................................................................................................................................................2015.005500000
......................................................................................................................................................GCCTGTATCTTGCTGAACC..............................................................................................................................................................1914.004400000
......................................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGG..........................................................................................................2314.004111010
..................................................................................................................................................TCGCGCCTGTATCTTGCTGA.................................................................................................................................................................2014.004300010
......................................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGTT.........................................................................................................2413.003000003
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGTT.........................................................................................................2513.003010002
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTTT..........................................................................................................2413.003010020
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGT................................................................................................................1813.003000210
......................................................................................................................................................................................................TGAGCAAAATTTCAGGTG...............................................................................................................1812.002200000
......................................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGAGT........................................................................................................2512.002100001
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTTC..........................................................................................................2412.002001010
......................................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGAC.........................................................................................................2412.002100100
..................................................................................................................................................TCGCGCCTGTATCTTGCTGAAA...............................................................................................................................................................2212.002010001
......................................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGC..........................................................................................................2312.002001100
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTA...........................................................................................................2312.002000011
..................................................................................................................................................TCGCGCCTGTATCTTGCTGAACCC.............................................................................................................................................................2412.002200000
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGATT........................................................................................................2612.002200000
...................................................................................................................................................CGCGCCTGTATCTTGCTGAAC...............................................................................................................................................................2112.002020000
....................................................................................................................................................................................................GTTGAGCAAAATTTCAGGTGTGT............................................................................................................2312.002000002
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGG............................................................................................................2212.002000011
.................................................................................................................................................TTCGCGCCTGTATCTTGCTGAACC..............................................................................................................................................................2411.001100000
....................................................................................................................................................................................................GTTGAGCAAAATTTCAGGTGTGTG...........................................................................................................2411.001001000
..................................................................................................................................................TCGCGCCTGTATCTTGCTGAACCGT-...........................................................................................................................................................2511.001100000
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTC...........................................................................................................2311.001000100
..................................................................................................................................................TCGCGCCTGTATCTTGCTGG.................................................................................................................................................................2011.001100000
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTTGA...........................................................................................................2331.003000003
...................................................................................................................................................CGCGCCTGTATCTTGCTGAA................................................................................................................................................................2011.001010000
......................................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGG............................................................................................................2111.001100000
......................................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGAGA........................................................................................................2511.001000010
.........................................................................................................................................................................................................GCAAAATTTCAGGTGTGT............................................................................................................1811.001000010
droWil2
T--ACC--T--------------TG-TGT--------------GTGGGTGTGTCTGTGTCCC----T----------GTGT-------ATCCTTCATGGTTC----CAATCAAAATTAACAT-----TT-GGCCGGCATATTTCATTCGCGCCTGTATCTTGCTGAACCGT-TACCAATTGTGATCATCATTTCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATTTGTGACGGTAACATCGTTGGAA---TACCC------------------------CAAAC--------------GAAGTGATCA---------AATATT--SizeHit CountTotal NormTotalM020

Head		M045

Female-body		V117

Male-body		V118

Embryo		V119

Head
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGA..........................................................................................................24231909.0063818396791525567474828
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTG...........................................................................................................2329495.00189906844393094618088
......................................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGA..........................................................................................................2321784.503569774783046364
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGT............................................................................................................2221136.00227234225575597841
......................................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTG...........................................................................................................222406.0081273829302436
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGT..........................................................................................................242336.0067222296228324
..................................................................................................................................................TCGCGCCTGTATCTTGCTGAACC..............................................................................................................................................................232325.00650372802646
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTG.............................................................................................................212314.00628203141103433
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGAA.........................................................................................................252143.00286018424420
..................................................................................................................................................TCGCGCCTGTATCTTGCTGAAC...............................................................................................................................................................22268.501377851521
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGA............................................................................................................22246.5093123789
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGAT.........................................................................................................25246.50931466715
......................................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGT............................................................................................................21241.0082024141628
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGG..........................................................................................................24235.5071721556
......................................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGAA.........................................................................................................24233.0066170553
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGT..............................................................................................................20231.006204111631
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGC..........................................................................................................24230.00602001939
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTA...........................................................................................................23225.00500132719
......................................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGT..........................................................................................................23216.50330141216
.......................................................................................................................................................................................................GAGCAAAATTTCAGGTGTGTGA..........................................................................................................22215.0030080184
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTC...........................................................................................................23211.5023012515
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTG...............................................................................................................19210.0020141032
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTTGA...........................................................................................................2339.3328011242
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTT...........................................................................................................2329.0018001116
.........................................................................................................................................................................GT-TACCAATTGTGATCATCATTTCCGG..................................................................................................................................2719.00900090
.......................................................................................................................................................................................................GAGCAAAATTTCAGGTGTGTG...........................................................................................................2128.501703158
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGAC.........................................................................................................2527.5015010113
....................................................................................................................................................................................................GTTGAGCAAAATTTCAGGTGTGTG...........................................................................................................2427.5015000141
....................................................................................................................................................................................................GTTGAGCAAAATTTCAGGTGTGTGA..........................................................................................................2526.5013000130
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGA..............................................................................................................2026.501300193
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTTGA.........................................................................................................2526.001200093
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGG............................................................................................................2226.0012120000
..................................................................................................................................................TCGCGCCTGTATCTTGCTGAACCG.............................................................................................................................................................2425.501121080
......................................................................................................................................................................................................TGAGCAAAATTTCAGGTGTG.............................................................................................................2025.501112026
..................................................................................................................................................TCGCGCCTGTATCTTGCTGAA................................................................................................................................................................2125.501134112
..................................................................................................................................................TCGCGCCTGTATCTTGCTGA.................................................................................................................................................................2025.001070012
....................................................................................................................................................GCGCCTGTATCTTGCTGAACC..............................................................................................................................................................2124.00841030
......................................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGA............................................................................................................2123.50700061
...........................................................................................................................................................................................................AAAATTTCAGGTGTGTGA..........................................................................................................1823.50703031
......................................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGAT.........................................................................................................2423.50701051
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGC............................................................................................................2223.50750002
...................................................................................................................................................CGCGCCTGTATCTTGCTGAACC..............................................................................................................................................................2222.50531010
......................................................................................................................................................................................................TGAGCAAAATTTCAGGTG...............................................................................................................1822.50540001
..................................................................................................................................................TCGCGCCTGTATCTTGCTGAACCT.............................................................................................................................................................2422.00440000
........................................................................................................................................................................................................AGCAAAATTTCAGGTGTGTGA..........................................................................................................2122.00400040
......................................................................................................................................................................................................TGAGCAAAATTTCAGGTGT..............................................................................................................1921.50300003
.......................................................................................................................................................................................................GAGCAAAATTTCAGGTGTGT............................................................................................................2021.50302100
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGAG.........................................................................................................2521.50300030
......................................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTA...........................................................................................................2221.50301020
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGAAT........................................................................................................2621.50300021
..................................................................................................................................................TCGCGCCTGTATCTTGCTG..................................................................................................................................................................1921.00211000
......................................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGAAT........................................................................................................2521.00200020
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGT................................................................................................................1821.00200020
.......................................................................................................................................................................................................GAGCAAAATTTCAGGTGTG.............................................................................................................1921.00201001
......................................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGAC.........................................................................................................2421.00200020
.........................................................................................................................................................................................................GCAAAATTTCAGGTGTGTGA..........................................................................................................2021.00201010
..................................................................................................................................................................................TTGTGATCATCATTTCCGG..................................................................................................................................1911.00100010
droVir3
T--GC-GATTGCAGGCTAACAGGAG----TTCAT-----------------------------CTTTCTGGTG-C-----------------------------------------TATCCC----TTG--GCCGGCATATTTCATTCGCGCCTGTATCTTGCTGAACCGT-TACAA-TTGAGACATCTAAATCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATTTGTAGCGGTATCATCATGACA--------AAAAAGAAAGT------------------------------------------------------------SizeHit CountTotal NormTotalM027

Male-body		M028

Head		M047

Female-body		M061

Embryo		SRR060654

Ovary		SRR060655

Testis		SRR060656

Ovary		SRR060657

Testis		SRR060658

Ovary		SRR060659

Testis		SRR060660

Ovary		SRR060661

Embryo		SRR060662

Embryo		SRR060663

Embryo		SRR060664

Male-body		SRR060665

Female-body		SRR060666

Male-body		SRR060667

Female-body		SRR060668

Male-body		SRR060669

Female-body		SRR060670

Testis		SRR060671

Male-body		SRR060672

Female-body		SRR060673

Ovary		SRR060674

Ovary		SRR060675

Ovary		SRR060676

Ovary		SRR060677

Ovary		SRR060678

Testis		SRR060679

Testis		SRR060680

Testis		SRR060681

Testis		SRR060682

Embryo		SRR060683

Testis		SRR060684

Embryo		SRR060685

Embryo		SRR060686

Embryo		SRR060687

Embryo		SRR060688

Ovary		SRR060689

Testis		SRR1106712

embryo_0-2h		SRR1106713

embryo_0-2h		SRR1106714

embryo_2-4h		SRR1106715

embryo_4-6h		SRR1106716

embryo_4-6h		SRR1106717

embryo_6-8h		SRR1106718

embryo_6-8h		SRR1106719

embryo_8-10h		SRR1106720

embryo_8-10h		SRR1106721

embryo_10-12h		SRR1106722

embryo_10-12h		SRR1106723

embryo_12-14h		SRR1106724

embryo_12-14h		SRR1106725

embryo_14-16h		SRR1106726

embryo_14-16h		SRR1106727

larvae		SRR1106728

larvae		SRR1106729

mixed whole adult body		SRR1106730

embryo_16-30h		V047

Embryo		V053

Head		V116

Male-body		GSM1528803

follicle cells		SRR2096013

Ovary_Strain_9_oxidized		SRR2096014

Ovary_Strain_160_oxidized		SRR2096026

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096038

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096050

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096055

Ovary_Min_43		SRR2096056

Ovary_Min_46		SRR2096057

Ovary_Min_50		SRR2096058

Ovary_Min_98		SRR2096059

Ovary_Min_164		SRR2096060

Ovary_Min_193		SRR2096061

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096072

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096079

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096080

embryo_0-2h from 15to16 day old nondysgenic mothers		SRR2096081

embryo_0-2h from 15to16 day old nondysgenic mothers
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGA..........................................................................................................24110939.00109392627262761712150000803366170522267396532368991168362010440900041028000000000000100001252563524314701211100002010021
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGT............................................................................................................2216139.00613943333054514600400003342281633783131994271475541211201210330500014330000000000000000001137659237902200000200000001
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTG...........................................................................................................2315191.005191613168170213420000004152077330721118062074384513220882209000072600000000000000101619749281159200000000000002300
......................................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGA..........................................................................................................2311717.0017172457791300000000152693212757680621781202071560100020500000000000000000034397727400000000100000000
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTG.............................................................................................................211710.007102114930011100000023231541362212730323103115030000040000000000000010005296626800000001100000000
......................................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTG...........................................................................................................221559.0055904358020000000054352033362024262000202513030000101000000000000000001572810000010001000000000
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGT..........................................................................................................241472.004720011201100100003016634112202532000101000000000010000000000000000002313620800000000000000000
......................................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGT............................................................................................................211341.0034112531010000000016111724249122290101013240100000100000000000000000004427000000000000000000
..................................................................................................................................................TCGCGCCTGTATCTTGCTGAACC..............................................................................................................................................................231281.002814710324800000000002110000000000000000000000000000000000713200091010001034431114101056
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGT..............................................................................................................201106.00106005001000000003114410670000000000000000000000000000000000000136000000000000000000
..................................................................................................................................................TCGCGCCTGTATCTTGCTGAAC...............................................................................................................................................................22195.0095104226000000000011111302100000000000000000000000000001000000810100011000022103210
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGAA.........................................................................................................25169.0069016600000000001130536044000000000000000010000000000000000001441000000000000000000
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTT...........................................................................................................23164.0064003500000000003114100190000000010100000000000000000000000001151800000000000000000
......................................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGT..........................................................................................................23149.004900010000010000230631035000001000000000010000000000000000000261400000000000000000
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGAT.........................................................................................................25148.004801220000000000622130013000000000000000000000000000000000000312100000000000000000
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGC............................................................................................................22138.003856018000000000000000000000000000000000000000000000000000000004500000000000000000
......................................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGAA.........................................................................................................24135.00351115000000000091121202200000010000000000000000000000000000030300000000000000000
..................................................................................................................................................TCGCGCCTGTATCTTGCTGA.................................................................................................................................................................20131.003181610000000000000001000000000000000000000000000000000000000000000000010000001003
......................................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGAT.........................................................................................................24125.00250013000000000042030200200000000000000000000000000000000000051200000000000000000
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGG..........................................................................................................24122.00221431010000000000000000100000000000000000000000000000000000062200000000100000000
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTG...............................................................................................................19118.001821000000000000000100000000000000000000000000000000000000000300000000001001000000
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGA............................................................................................................22118.001800100000000000100201012000000000000000000000000000000000000001000000000000000000
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTA...........................................................................................................23117.00170013000000000000010000200000000000000000000000000000000000020800000000000000000
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGC..........................................................................................................24117.00170001000000000020010000100000000000000000000000000000000000073200000000000000000
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGG............................................................................................................22116.00166310000000000000000000000000000000000000000000000000000000001500000000000000000
......................................................................................................................................................................................................TGAGCAAAATTTCAGGTGTG.............................................................................................................20115.00152135000000000010000002000000000000000000000000000000000000000000000000001000000
.......................................................................................................................................................................................................GAGCAAAATTTCAGGTGTGTGA..........................................................................................................22111.00110021000000000010000000000000000000000000000000000000000000031300000000000000000
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGTT.........................................................................................................25110.00100020000000000011000200000000000000000000000000000000000000000400000000000000000
..................................................................................................................................................TCGCGCCTGTATCTTGCTGAA................................................................................................................................................................2118.0080400000000000000011000100000000000000000000000000000000000000100000000000000000
......................................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGG..........................................................................................................2317.0070200000000000000000000000000000000000000000000000000000000201200000000000000000
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTTT..........................................................................................................2417.0070010000000000010001000100000000000000000000000000000000000001200000000000000000
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTC...........................................................................................................2317.0070003000000000000000000000000010000000000000000000000000000000300000000000000000
......................................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTT...........................................................................................................2216.0060000000000000000000001000000000000000000000000000000000000021200000000000000000
..................................................................................................................................................TCGCGCCTGTATCTTGCTGG.................................................................................................................................................................2016.0064200000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................GAGCAAAATTTCAGGTGTGTG...........................................................................................................2116.0060050000000000000000000000000000000000000000000000000000000000100000000000000000
......................................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGC..........................................................................................................2315.0050100000000000010000000000000000000000000000000000000000000011100000000000000000
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGT................................................................................................................1814.0040000000000000010010001000000000100000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................AAAATTTCAGGTGTGTGA..........................................................................................................1814.0040030000000000000010000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGAC.........................................................................................................2513.0030003000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGAG.........................................................................................................2513.0030000000000000010000100000000000000000000000000000000000000010000000000000000000
....................................................................................................................................................................................................GTTGAGCAAAATTTCAGGTGTG.............................................................................................................2213.0030020000000000000000000000000000000000000000000000000000000000100000000000000000
...................................................................................................................................................CGCGCCTGTATCTTGCTGAACC..............................................................................................................................................................2213.0030111000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGTT.........................................................................................................2412.0020000000000000001000000000000000000000000000000000000000000000100000000000000000
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGC..............................................................................................................2012.0021000000000000000000000000000000000000000000000000000000000000100000000000000000
..................................................................................................................................................TCGCGCCTGTATCTTGCTGAAA...............................................................................................................................................................2212.0021100000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................CAAAATTTCAGGTGTGTGA..........................................................................................................1912.0020001000000000000000000000000000000000000000000000000000000010000000000000000000
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTT.............................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000200000000000000000
droMoj3
C--AGTGCT--------------AC-T-------------------------AT-------------TTGGGAGC-----------------------------------------TATCCT-----TA--GCCGGCATCTTTCATTCGCGCCTGTATCTTGCTGAACCGT-TACAA-TTGTCACATCCAAATCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATTTGTAGCGGTCTCATCAAAGCAA---------------AGT------------------------------------------------------------SizeHit CountTotal NormTotalM046

Female-body		V041

Embryo		V049

Head		V056

Head		M060

Embryo		V110

Male-body
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGA..........................................................................................................2418070.008070469222114425429342048
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGT............................................................................................................2213515.003515615852774463181774
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTG...........................................................................................................2311777.0017772072906677336801
......................................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGA..........................................................................................................2311079.0010791292993151330239
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTG.............................................................................................................211548.0054877252841173204
..................................................................................................................................................TCGCGCCTGTATCTTGCTGAACC..............................................................................................................................................................231415.00415021023911
......................................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGT............................................................................................................211217.002177941432781
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGT..........................................................................................................241211.002111918111626121
......................................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTG...........................................................................................................221202.00202522311202868
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGT..............................................................................................................201104.001041131214064
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGC............................................................................................................221101.001010003953
..................................................................................................................................................TCGCGCCTGTATCTTGCTGAAC...............................................................................................................................................................22189.00893503771
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGAA.........................................................................................................25162.006213715288
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGAT.........................................................................................................25139.00395012247
......................................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGAA.........................................................................................................24138.00382510273
......................................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGT..........................................................................................................23135.003580110115
......................................................................................................................................................................................................TGAGCAAAATTTCAGGTGTG.............................................................................................................20125.00253031162
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGG..........................................................................................................24121.0021142086
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTC...........................................................................................................23121.00212103213
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGA............................................................................................................22118.0018420075
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGC..........................................................................................................24117.0017190070
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTT...........................................................................................................23114.0014202154
...........................................................................................................................................................................................................AAAATTTCAGGTGTGTGA..........................................................................................................18111.0011110090
.......................................................................................................................................................................................................GAGCAAAATTTCAGGTGTGTGA..........................................................................................................22110.0010500041
......................................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGAT.........................................................................................................2418.008301031
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTG...............................................................................................................1917.007101050
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTA...........................................................................................................2317.007000034
.......................................................................................................................................................................................................GAGCAAAATTTCAGGTGTGT............................................................................................................2017.007600010
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTTT..........................................................................................................2416.006300102
..................................................................................................................................................TCGCGCCTGTATCTTGCTGA.................................................................................................................................................................2015.005001220
......................................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGG..........................................................................................................2315.005010022
......................................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGAAT........................................................................................................2514.004100030
......................................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGC............................................................................................................2114.004001030
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGTT.........................................................................................................2514.004001003
......................................................................................................................................................................................................TGAGCAAAATTTCAGGTGT..............................................................................................................1913.003111000
..................................................................................................................................................TCGCGCCTGTATCTTGCTGAA................................................................................................................................................................2113.003010110
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGATT........................................................................................................2613.003001020
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTA.............................................................................................................2113.003000030
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTT.............................................................................................................2113.003000021
......................................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGC..........................................................................................................2313.003000030
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGAC.........................................................................................................2513.003010020
.........................................................................................................................................................................GT-TACAA-TTGTCACATCCAAATCCGG..................................................................................................................................2612.002000020
....................................................................................................................................................GCGCCTGTATCTTGCTGAACC..............................................................................................................................................................2112.002010010
.........................................................................................................................................................................................................GCAAAATTTCAGGTGTGTGA..........................................................................................................2012.002000020
......................................................................................................................................................................................................TGAGCAAAATTTCAGGTG...............................................................................................................1812.002000011
...................................................................................................................................................CGCGCCTGTATCTTGCTGAACC..............................................................................................................................................................2212.002000020
....................................................................................................................................................................................................GTTGAGCAAAATTTCAGGTGTGTGA..........................................................................................................2512.002100010
.......................................................................................................................................................................................................GAGCAAAATTTCAGGTGTG.............................................................................................................1912.002200000
.......................................................................................................................................................................................................GAGCAAAATTTCAGGTGTGTG...........................................................................................................2112.002100001
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGCT.........................................................................................................2511.001001000
........................................................................................................................................................................................................AGCAAAATTTCAGGTGTGT............................................................................................................1911.001100000
droGri2
T--GGTA-T--------------AG-TCG---A----ATTTGTGTAACTCTCTCTCTCTCACTCTCTGTGGTG-T-----------------------------------------TATCCT-----TG--ACCGGCATATTTCATTCGCGCCTGTATCTTGCTGAACCGT-TACCA-TTGTGACATCCAAATCCGGTTGAGCAAAATTTCAGGTGTGTGAGAAATTTGT-------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM041

Female-body		V109

Male-body
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGA..........................................................................................................241605.00605135470
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGT............................................................................................................221329.0032999230
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTG...........................................................................................................231190.0019046144
......................................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGA..........................................................................................................23166.00662442
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTG.............................................................................................................21160.00601545
......................................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGT............................................................................................................21122.0022157
......................................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTG...........................................................................................................22116.0016106
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGAA.........................................................................................................2517.00743
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGAT.........................................................................................................2517.00743
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTGT..........................................................................................................2415.00514
......................................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGAA.........................................................................................................2414.00422
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGA............................................................................................................2213.00303
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGT..............................................................................................................2013.00303
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTT...........................................................................................................2312.00202
.......................................................................................................................................................................................................GAGCAAAATTTCAGGTGTGTGA..........................................................................................................2212.00220
......................................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGT..........................................................................................................2312.00202
...........................................................................................................................................................................................................AAAATTTCAGGTGTGTGA..........................................................................................................1812.00220
.......................................................................................................................................................................................................GAGCAAAATTTCAGGTGTGT............................................................................................................2012.00220
..................................................................................................................................................TCGCGCCTGTATCTTGCTGAAC...............................................................................................................................................................2212.00211
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTA...........................................................................................................2312.00202
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTC...........................................................................................................2311.00101
......................................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTGAT.........................................................................................................2411.00101
......................................................................................................................................................................................................TGAGCAAAATTTCAGGTGTG.............................................................................................................2011.00110
......................................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGA............................................................................................................2111.00101
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTG...............................................................................................................1911.00101
......................................................................................................................................................................................................TGAGCAAAATTTCAGGTGT..............................................................................................................1911.00110
....................................................................................................................................................................................................GTTGAGCAAAATTTCAGGTGTGT............................................................................................................2311.00110
......................................................................................................................................................................................................TGAGCAAAATTTCAGGTGTGTATT.........................................................................................................2411.00110
.....................................................................................................................................................................................................TTGAGCAAAATTTCAGGTGTGTTT..........................................................................................................2411.00110

Generated: 10/20/2015 at 07:31 PM