ID:

dan-mir-6-2

 Coordinate:

scaffold_13266:9731963-9732046 +

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

3pUTR

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-35.6

Flybase annnotation

pre_miRNA [Dana\mir-6-2-RM]; utr3 [utr3_minus_3614]; miRNA [Dana\miR-6-2-RA]

No Repeatable elements found

mature

  1. dan-mir-6-1  scaffold_13266:9731862-9731883 +
  2. dan-mir-6-2  scaffold_13266:9732020-9732041 +
  3. dan-mir-6-3  scaffold_13266:9732170-9732191 +
star

Sense Strand Reads

AGAATGTTCTGTGATTTTTCGTTATCCGACGACAAATATTATTCCGGTGTTAGCCCCAGGGAACTGTTGCTGCTGATATATTATTCTCCCAAAAAAAAAATCACCTATATCACAGTGGCTGTTCTTTTTGGCTGCACCGACAAGTTCACCGATTTGTCATTTGTGGCACGCATTTGTGTCACGT

******************************************..((((((.((((..(((((((.(((((((.(((((((.........................)))))))))))))).)))))))..)))))))))).....**************************************** 		Read size # Mismatch Hit Count Total Norm Total M058

embryo

 M044

female body

 V039

embryo

 V106

head

 V105

male body		 V055

head
...........................................................................................................TATCACAGTGGCTGTTCTTTTT....................................................... 22 0 3 15043.33 45130 44752 367 0 4 7 0
...........................................................................................................TATCACAGTGGCTGTTCTTTT........................................................ 21 0 3 3049.33 9148 9039 97 2 8 2 0
...........................................................................................................TATTACAGTGGCTGTTCTTTTT....................................................... 22 1 3 667.33 2002 2002 0 0 0 0 0
...........................................................................................................TGTCACAGTGGCTGTTCTTTTT....................................................... 22 1 3 493.00 1479 1479 0 0 0 0 0
...........................................................................................................TATCACAGTGGCTGTTCTTTTC....................................................... 22 1 3 462.00 1386 1386 0 0 0 0 0
...........................................................................................................TACCACAGTGGCTGTTCTTTTT....................................................... 22 1 3 369.00 1107 1107 0 0 0 0 0
...........................................................................................................TATCACAGTGGCTGTTCTTT......................................................... 20 0 3 276.00 828 792 26 0 2 8 0
...........................................................................................................TATTACAGTGGCTGTTCTTTT........................................................ 21 1 3 133.67 401 401 0 0 0 0 0
...........................................................................................................TTTCACAGTGGCTGTTCTTTTT....................................................... 22 1 3 123.33 370 370 0 0 0 0 0
...........................................................................................................TGTCACAGTGGCTGTTCTTTT........................................................ 21 1 3 101.00 303 303 0 0 0 0 0
...........................................................................................................TACCACAGTGGCTGTTCTTTT........................................................ 21 1 3 76.67 230 230 0 0 0 0 0
...........................................................................................................TATCACAGTGGCTGTTCTTTC........................................................ 21 1 3 57.67 173 172 0 0 1 0 0
...........................................................................................................GATCACAGTGGCTGTTCTTTTT....................................................... 22 1 3 57.33 172 171 1 0 0 0 0
...........................................................................................................CATCACAGTGGCTGTTCTTTTT....................................................... 22 1 3 49.00 147 146 1 0 0 0 0
.........................................................AGGGAACTGTTGCTGCTGATATA........................................................................................................ 23 0 1 43.00 43 34 0 8 1 0 0
...........................................................................................................TATCACAGCGGCTGTTCTTTTT....................................................... 22 1 3 40.00 120 117 3 0 0 0 0
...........................................................................................................TATCACAGTGGCTGTTCTTC......................................................... 20 1 3 37.00 111 111 0 0 0 0 0
............................................................................................................ATCACAGTGGCTGTTCTTTTT....................................................... 21 0 3 35.67 107 67 40 0 0 0 0
...........................................................................................................TATCACAGTGGCTGTTCTTTTTC...................................................... 23 1 3 34.67 104 104 0 0 0 0 0
...........................................................................................................AATCACAGTGGCTGTTCTTTTT....................................................... 22 1 3 34.33 103 102 1 0 0 0 0
...........................................................................................................TATCACAGTGGCTGTTCTTTTTA...................................................... 23 1 3 33.67 101 98 3 0 0 0 0
...........................................................................................................TATCTCAGTGGCTGTTCTTTTT....................................................... 22 1 3 32.67 98 98 0 0 0 0 0
...........................................................................................................TATCACAGTGGCTGCTCTTTTT....................................................... 22 1 3 32.00 96 95 1 0 0 0 0
..........................................................................................................CTATCACAGTGGCTGTTCTTTTT....................................................... 23 1 3 26.00 78 78 0 0 0 0 0
...........................................................................................................TATCACAGTGGATGTTCTTTTT....................................................... 22 1 3 24.00 72 72 0 0 0 0 0
...........................................................................................................TGTTACAGTGGCTGTTCTTTTT....................................................... 22 2 3 23.67 71 71 0 0 0 0 0
...........................................................................................................TTTCACAGTGGCTGTTCTTTT........................................................ 21 1 3 22.33 67 67 0 0 0 0 0
...........................................................................................................TGTCACAGTGGCTGTTCTTTTC....................................................... 22 2 3 17.67 53 53 0 0 0 0 0
...........................................................................................................TATCAGAGTGGCTGTTCTTTTT....................................................... 22 1 3 17.33 52 52 0 0 0 0 0
...........................................................................................................TATCACAGTGGCTGTTCTT.......................................................... 19 0 3 17.33 52 39 8 0 3 2 0
...........................................................................................................TATCACAGTGGCTGATCTTTTT....................................................... 22 1 3 14.67 44 44 0 0 0 0 0
...........................................................................................................TATTACAGTGGCTGTTCTTTTC....................................................... 22 2 3 14.67 44 44 0 0 0 0 0
...........................................................................................................TATCACAGTGGCTGTCCTTTTT....................................................... 22 1 3 14.33 43 42 1 0 0 0 0
...........................................................................................................TATCACAGTGGCTGTTCCTTTT....................................................... 22 1 3 14.33 43 43 0 0 0 0 0
...........................................................................................................TATCACAGTGGCTGTTCTTTTTG...................................................... 23 0 2 14.00 28 24 2 0 1 1 0
...........................................................................................................TATCACAGTGGCTTTTCTTTTT....................................................... 22 1 3 12.67 38 38 0 0 0 0 0
.........................................................AGGGAACTGTTGCTGCTGATAT......................................................................................................... 22 0 1 12.00 12 9 0 2 0 0 1
...........................................................................................................TATCACAGTGGCTGTTCTTTGT....................................................... 22 1 3 11.33 34 34 0 0 0 0 0
...........................................................................................................TATCATAGTGGCTGTTCTTTTT....................................................... 22 1 3 11.00 33 32 1 0 0 0 0
...........................................................................................................TATCACAGTGGCTGTGCTTTTT....................................................... 22 1 3 10.67 32 32 0 0 0 0 0
...........................................................................................................TATCACAGTGGCTGTTTTTTTT....................................................... 22 1 3 10.67 32 30 0 2 0 0 0
...........................................................................................................GATCACAGTGGCTGTTCTTTT........................................................ 21 1 3 10.67 32 32 0 0 0 0 0
...........................................................................................................TATCACAGTGGCTGTTCTTCTT....................................................... 22 1 3 10.33 31 31 0 0 0 0 0
...........................................................................................................TATTACAGTGGCTGTTCTTT......................................................... 20 1 3 10.33 31 31 0 0 0 0 0
...........................................................................................................TATCACAGGGGCTGTTCTTTTT....................................................... 22 1 3 10.00 30 11 18 1 0 0 0
...........................................................................................................TATCACAGTGGCCGTTCTTTTT....................................................... 22 1 3 9.67 29 28 0 0 1 0 0
...........................................................................................................TACTACAGTGGCTGTTCTTTTT....................................................... 22 2 3 9.33 28 28 0 0 0 0 0
...........................................................................................................TACCACAGTGGCTGTTCTTTTC....................................................... 22 2 3 9.33 28 28 0 0 0 0 0
...........................................................................................................TATCGCAGTGGCTGTTCTTTTT....................................................... 22 1 3 9.33 28 28 0 0 0 0 0
...........................................................................................................TATCACGGTGGCTGTTCTTTTT....................................................... 22 1 3 9.33 28 27 0 1 0 0 0
...........................................................................................................TATCACAGTGACTGTTCTTTTT....................................................... 22 1 3 9.33 28 26 0 2 0 0 0
...........................................................................................................TATCACAGTTGCTGTTCTTTTT....................................................... 22 1 3 9.00 27 26 0 0 1 0 0
..............................................................................................................CACAGTGGCTGTTCTTTTT....................................................... 19 0 3 8.67 26 26 0 0 0 0 0
.............................................................................................................TCACAGTGGCTGTTCTTTTT....................................................... 20 0 3 8.00 24 19 5 0 0 0 0
...........................................................................................................TATCTCAGTGGCTGTTCTTTT........................................................ 21 1 3 7.67 23 23 0 0 0 0 0
...........................................................................................................TATCACAGCGGCTGTTCTTTT........................................................ 21 1 3 7.33 22 19 3 0 0 0 0
...........................................................................................................TGTCACAGTGGCTGTTCTTT......................................................... 20 1 3 7.00 21 21 0 0 0 0 0
.........................................................ATGGAACTGTTGCTGCTGATATA........................................................................................................ 23 1 1 7.00 7 6 0 1 0 0 0
...........................................................................................................TATCACAGAGGCTGTTCTTTTT....................................................... 22 1 3 7.00 21 15 6 0 0 0 0
...........................................................................................................TATCACAGTGGCTGGTCTTTTT....................................................... 22 1 3 6.67 20 17 0 1 1 1 0
...........................................................................................................CATCACAGTGGCTGTTCTTTT........................................................ 21 1 3 6.67 20 20 0 0 0 0 0
...........................................................................................................TATCACAGTGGCTGTTGTTTTT....................................................... 22 1 3 6.67 20 19 0 1 0 0 0
...........................................................................................................TATCACAGTGGTTGTTCTTTTT....................................................... 22 1 3 6.67 20 20 0 0 0 0 0
...........................................................................................................AATCACAGTGGCTGTTCTTTT........................................................ 21 1 3 6.33 19 19 0 0 0 0 0
...........................................................................................................TATCACAGTCGCTGTTCTTTTT....................................................... 22 1 3 6.33 19 19 0 0 0 0 0
...........................................................................................................TATCACAGTGGCTGTTCT........................................................... 18 0 3 6.00 18 18 0 0 0 0 0
...............................................................................................................ACAGTGGCTGTTCTTTTT....................................................... 18 0 3 6.00 18 18 0 0 0 0 0
............................................................................................................ATCACAGTGGCTGTTCTTTT........................................................ 20 0 3 6.00 18 11 7 0 0 0 0
...........................................................................................................TATCACAGTAGCTGTTCTTTTT....................................................... 22 1 3 5.67 17 15 0 2 0 0 0
...........................................................................................................TATCACACTGGCTGTTCTTTTT....................................................... 22 1 3 5.67 17 17 0 0 0 0 0
...........................................................................................................TATCACATTGGCTGTTCTTTTT....................................................... 22 1 3 5.67 17 17 0 0 0 0 0
...........................................................................................................TACCACAGTGGCTGTTCTTT......................................................... 20 1 3 5.67 17 17 0 0 0 0 0
...........................................................................................................TATCACAATGGCTGTTCTTTTT....................................................... 22 1 3 5.33 16 16 0 0 0 0 0
..........................................................................................................CTATCACAGTGGCTGTTCTTTT........................................................ 22 1 3 5.33 16 15 1 0 0 0 0
...........................................................................................................TATCACAGTGGCTGTTCTTTTA....................................................... 22 1 3 5.33 16 15 0 0 1 0 0
...........................................................................................................TATCACAGTGGCTGCTCTTTT........................................................ 21 1 3 5.33 16 16 0 0 0 0 0
...........................................................................................................TTTCACAGTGGCTGTTCTTTTC....................................................... 22 2 3 5.00 15 15 0 0 0 0 0
...........................................................................................................TATCACAGTGGCTGTTCTCTTT....................................................... 22 1 3 5.00 15 15 0 0 0 0 0
...........................................................................................................TATCACAGTGGCTGTTCTTGTT....................................................... 22 1 3 4.67 14 13 0 1 0 0 0
..........................................................................................................CGATCACAGTGGCTGTTCTTTTT....................................................... 23 2 3 4.67 14 14 0 0 0 0 0
...........................................................................................................TATCACAGTGGCTTTTCTTTT........................................................ 21 1 3 4.33 13 13 0 0 0 0 0
...........................................................................................................TATTACAGTGGCTGCTCTTTTT....................................................... 22 2 3 4.33 13 13 0 0 0 0 0
...........................................................................................................TATCACAGTGGCTATTCTTTTT....................................................... 22 1 3 4.33 13 13 0 0 0 0 0
...........................................................................................................TATCACAGTGGCTGTTCTTTG........................................................ 21 1 3 4.33 13 13 0 0 0 0 0
...........................................................................................................TATCACAGTGGGTGTTCTTTTT....................................................... 22 1 3 4.33 13 13 0 0 0 0 0
...........................................................................................................TTTCACAGTGGCTGTTCTTT......................................................... 20 1 3 4.00 12 12 0 0 0 0 0
...........................................................................................................TATCACAGTGGCTTTCTTTTT........................................................ 21 3 12 4.00 48 45 3 0 0 0 0
.........................................................ATGGAACTGTTGCTGCTGATAT......................................................................................................... 22 1 1 4.00 4 4 0 0 0 0 0
...........................................................................................................TATCACAGTGGCTGATCTTTT........................................................ 21 1 3 4.00 12 12 0 0 0 0 0
...........................................................................................................TATCACAGTGCCTGTTCTTTTT....................................................... 22 1 3 4.00 12 11 0 1 0 0 0
...........................................................................................................TATCACAGTGGCTGTCCTTTT........................................................ 21 1 3 3.67 11 10 0 1 0 0 0
...........................................................................................................TATCACAGTGGCTGTACTTTTT....................................................... 22 1 3 3.67 11 11 0 0 0 0 0
...........................................................................................................TAACACAGTGGCTGTTCTTTTT....................................................... 22 1 3 3.67 11 11 0 0 0 0 0
...........................................................................................................TGTCACAGTGGCTGTTCTTTC........................................................ 21 2 3 3.67 11 11 0 0 0 0 0
...........................................................................................................TGTTACAGTGGCTGTTCTTTT........................................................ 21 2 3 3.33 10 10 0 0 0 0 0
...........................................................................................................TATCACAGTGGATGTTCTTTT........................................................ 21 1 3 3.33 10 10 0 0 0 0 0
...........................................................................................................TATCACAGTGGCTGTTCTTTTG....................................................... 22 1 3 3.33 10 9 1 0 0 0 0
............................................................................................................AGCACAGTGGCTGTTCTTTTT....................................................... 21 1 3 3.33 10 10 0 0 0 0 0
...........................................................................................................TATCACAGTGGCTGTTATTTTT....................................................... 22 1 3 3.00 9 9 0 0 0 0 0
................................................................................TTATTCTCCCAAAAAAAAAATCACCTA............................................................................. 27 0 1 3.00 3 3 0 0 0 0 0
...........................................................................................................TACCACAGCGGCTGTTCTTTTT....................................................... 22 2 3 3.00 9 9 0 0 0 0 0
...........................................................................................................TATCACAGTGGCTGTTCTTTTTAA..................................................... 24 2 3 3.00 9 7 1 0 0 1 0
...........................................................................................................TATCACAGTGTCTGTTCTTTTT....................................................... 22 1 3 2.67 8 8 0 0 0 0 0
...........................................................................................................TATTTCAGTGGCTGTTCTTTTT....................................................... 22 2 3 2.67 8 8 0 0 0 0 0
...........................................................................................................TATCAGAGTGGCTGTTCTTTT........................................................ 21 1 3 2.67 8 8 0 0 0 0 0
.........................................................................................................TCTATCACAGTGGCTGTTCTTTTT....................................................... 24 1 3 2.67 8 8 0 0 0 0 0
...........................................................................................................TATCACAGTGGCTGTTCGTTTT....................................................... 22 1 3 2.67 8 8 0 0 0 0 0
...........................................................................................................TATTACAGCGGCTGTTCTTTTT....................................................... 22 2 3 2.67 8 8 0 0 0 0 0
...........................................................................................................TATCACAGAGGCTGTTCTTTT........................................................ 21 1 3 2.67 8 6 2 0 0 0 0
...........................................................................................................TATCACAGTGGCTGTTCTTTTTGT..................................................... 24 1 2 2.50 5 5 0 0 0 0 0
...........................................................................................................TACCACAGTGGCTGTTCTTTC........................................................ 21 2 3 2.33 7 7 0 0 0 0 0
...........................................................................................................TATTACAGTGGCTGTTCTTC......................................................... 20 2 3 2.33 7 7 0 0 0 0 0
...........................................................................................................TATCACAGTGGCTGTTCTTATT....................................................... 22 1 3 2.33 7 7 0 0 0 0 0
...........................................................................................................TATCACAGTTGCTGTTCTTTT........................................................ 21 1 3 2.33 7 7 0 0 0 0 0
...........................................................................................................TATCACAGTGGCTGTTCTGTTT....................................................... 22 1 3 2.33 7 7 0 0 0 0 0
...........................................................................................................TATCACAGTGGCTGTGCTTTT........................................................ 21 1 3 2.33 7 6 0 0 0 1 0
...........................................................................................................TATCACAGTGGCTGGTCTTTT........................................................ 21 1 3 2.33 7 5 0 0 2 0 0
...........................................................................................................TATCACAGGGGCTGTTCTTTT........................................................ 21 1 3 2.33 7 1 6 0 0 0 0
...........................................................................................................TACCACAGTGGCTGTTCTTC......................................................... 20 2 3 2.33 7 7 0 0 0 0 0
...........................................................................................................TATCACAGTGGCTGTTTTTTT........................................................ 21 1 3 2.33 7 7 0 0 0 0 0
...........................................................................................................TTTTACAGTGGCTGTTCTTTTT....................................................... 22 2 4 2.25 9 9 0 0 0 0 0
.........................................................AGGGAACTGTTGCTGCTGAT........................................................................................................... 20 0 1 2.00 2 2 0 0 0 0 0
...........................................................................................................TATCACAGTGGTTGTTCTTTT........................................................ 21 1 3 2.00 6 6 0 0 0 0 0
...........................................................................................................TATCATAGTGGCTGTTCTTTT........................................................ 21 1 3 2.00 6 6 0 0 0 0 0
...........................................................................................................TATCACAGTGGCTGTTCCTTT........................................................ 21 1 3 2.00 6 6 0 0 0 0 0
.........................................................AGGGAACCTCTGCTGCTGATATA........................................................................................................ 23 3 1 2.00 2 0 2 0 0 0 0
............................................................................................................ATCACAGTGGCTGTTCTTT......................................................... 19 0 3 2.00 6 3 3 0 0 0 0
...........................................................................................................TATCACAGTGACTGTTCTTTT........................................................ 21 1 3 2.00 6 6 0 0 0 0 0
.........................................................AGGGAACTGTTGCTGCTGATA.......................................................................................................... 21 0 1 2.00 2 2 0 0 0 0 0
.........................................................................................................TCTATCACAGTGGCTGTTCTTTT........................................................ 23 1 3 1.67 5 5 0 0 0 0 0
...........................................................................................................TGTCACAGTGGCTGTTCTTTTTA...................................................... 23 2 3 1.67 5 5 0 0 0 0 0
...........................................................................................................TGTCACAGCGGCTGTTCTTTTT....................................................... 22 2 3 1.67 5 5 0 0 0 0 0
...........................................................................................................TATCACAGTGCCTGTTCTTTT........................................................ 21 1 3 1.67 5 5 0 0 0 0 0
...........................................................................................................TATCACAGTGGCTCTTCTTTTT....................................................... 22 1 3 1.67 5 5 0 0 0 0 0
...........................................................................................................TATTACAGTGGCTGTTCTTTTTA...................................................... 23 2 3 1.67 5 5 0 0 0 0 0
...........................................................................................................TGTCACAGTGGCTGTTCTTC......................................................... 20 2 3 1.67 5 5 0 0 0 0 0
.............................................................................................................TATCAGTGGCTGTTCTTTTT....................................................... 20 2 3 1.67 5 5 0 0 0 0 0
...........................................................................................................TATCACAGTGGCTGTTCATTTT....................................................... 22 1 3 1.67 5 5 0 0 0 0 0
..........................................................................................................CGATCACAGTGGCTGTTCTTTT........................................................ 22 2 3 1.67 5 5 0 0 0 0 0
.............................................................................................................TCACAGTGGCTGTTCTTTT........................................................ 19 0 3 1.67 5 5 0 0 0 0 0
...........................................................................................................TATCACAGCGGCTGTTCTTTTC....................................................... 22 2 3 1.67 5 5 0 0 0 0 0
.......................................................................................................GATCTATCACAGTGGCTGTTCTTTTT....................................................... 26 3 3 1.67 5 5 0 0 0 0 0
...........................................................................................................TGTCACAGTGGATGTTCTTTTT....................................................... 22 2 3 1.67 5 5 0 0 0 0 0
..........................................................................................................ATATCACAGTGGCTGTTCTTTT........................................................ 22 0 3 1.67 5 5 0 0 0 0 0
...........................................................................................................TATCACAGTGGCTGTTCTTCT........................................................ 21 1 3 1.33 4 4 0 0 0 0 0
...........................................................................................................TATCACAGTGGCAGTTCTTTTT....................................................... 22 1 3 1.33 4 4 0 0 0 0 0
...........................................................................................................TATTACAGTGGCTGTCCTTTTT....................................................... 22 2 3 1.33 4 4 0 0 0 0 0
...........................................................................................................AATCACAGTGGCTGTTCTTTTC....................................................... 22 2 3 1.33 4 4 0 0 0 0 0
............................................................................................................ATAACAGTGGCTGTTCTTTTT....................................................... 21 1 3 1.33 4 4 0 0 0 0 0
...........................................................................................................TATGACAGTGGCTGTTCTTTTT....................................................... 22 1 3 1.33 4 4 0 0 0 0 0
...........................................................................................................TATCACACTGGCTGTTCTTTT........................................................ 21 1 3 1.33 4 4 0 0 0 0 0
...........................................................................................................TATCACAGTGGCTGTTCTCTT........................................................ 21 1 3 1.33 4 4 0 0 0 0 0
...........................................................................................................TATCACGGTGGCTGTTCTTTT........................................................ 21 1 3 1.33 4 4 0 0 0 0 0
...........................................................................................................TCTCACAGTGGCTGTTCTTTTT....................................................... 22 1 3 1.33 4 4 0 0 0 0 0
...........................................................................................................TATCACAGTGGCTGGTCTTT......................................................... 20 1 3 1.33 4 1 0 2 0 1 0
...........................................................................................................TATCACAGTCGCTGTTCTTTTC....................................................... 22 2 3 1.00 3 3 0 0 0 0 0
................................................................................TTATTCTCCCAAAAAAAAAATCACCT.............................................................................. 26 0 1 1.00 1 1 0 0 0 0 0
...........................................................................................................TATCACAGTAGCTGTTCTTTT........................................................ 21 1 3 1.00 3 3 0 0 0 0 0
...........................................................................................................TATCTCAGTGGCTGTTCTTT......................................................... 20 1 3 1.00 3 3 0 0 0 0 0
...........................................................................................................TATCACAGTGGCTGTTCTTGT........................................................ 21 1 3 1.00 3 3 0 0 0 0 0
.........................................................AGCGAACTGTTGCTGCTGATATA........................................................................................................ 23 1 1 1.00 1 1 0 0 0 0 0
...........................................................................................................TATTACAGTGGCTGTTTTTTTT....................................................... 22 2 3 1.00 3 3 0 0 0 0 0
...........................................................................................................TATCACAGTGGCTGTTCTC.......................................................... 19 1 3 1.00 3 3 0 0 0 0 0
...........................................................................................................TGTCACAGTGGCTGTTCTTTTA....................................................... 22 2 3 1.00 3 3 0 0 0 0 0
...........................................................................................................TATTACAGCGGCTGTTCTTTT........................................................ 21 2 3 1.00 3 3 0 0 0 0 0
.........................................................ACGGAACTGTTGCTGCTGATATA........................................................................................................ 23 1 1 1.00 1 1 0 0 0 0 0
...........................................................................................................TAACACAGTGGCTGTTCTTTT........................................................ 21 1 3 1.00 3 3 0 0 0 0 0
...........................................................................................................TATCACAGTGGATGTTCTTT......................................................... 20 1 3 1.00 3 2 0 0 0 1 0
.........................................................AGGGAACCTCTGCTGCTGATAT......................................................................................................... 22 3 1 1.00 1 0 0 1 0 0 0
...........................................................................................................TATCACAGTGGCTGCTCTTTTC....................................................... 22 2 3 1.00 3 3 0 0 0 0 0
.........................................................AGCGAACTGTTGCTGCTGATAT......................................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0
............................................................................................................ATCACAGTGGCTGTTCTTTTC....................................................... 21 1 3 1.00 3 3 0 0 0 0 0
...........................................................................................................TGTCACAGTGGCTGTTCTTTTTC...................................................... 23 2 3 1.00 3 3 0 0 0 0 0
...........................................................................................................TACCACACTGGCTGTTCTTTTT....................................................... 22 2 3 1.00 3 3 0 0 0 0 0
...........................................................................................................TATCACAGTGGCTGTTCTATTT....................................................... 22 1 3 1.00 3 3 0 0 0 0 0
...........................................................................................................TGCCACAGTGGCTGTTCTTTTT....................................................... 22 2 3 1.00 3 3 0 0 0 0 0
........................................................CAGGGAACTGTTGCTGCTGATATA........................................................................................................ 24 0 1 1.00 1 1 0 0 0 0 0
.........................................................AGGGAACTGTTGCTGCTGATAC......................................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0
...........................................................................................................TATCACAGTGGATGTTCTTTTC....................................................... 22 2 3 1.00 3 3 0 0 0 0 0
...........................................................................................................GATCACAGTGGCTGTTCTTTTC....................................................... 22 2 3 1.00 3 3 0 0 0 0 0
.........................................................AGGGAACTGTTACTGCTGATAT......................................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0
..................................AATATTATTCCGGTGTTAGCCCC............................................................................................................................... 23 0 1 1.00 1 1 0 0 0 0 0
.........................................................AGGGGACTGTTGCTGCTGATGTA........................................................................................................ 23 2 1 1.00 1 0 0 1 0 0 0
...........................................................................................................TATCACAGTGGGTGTTCTTTT........................................................ 21 1 3 1.00 3 3 0 0 0 0 0
...........................................................................................................TATCACAGTGGCTATTCTTTT........................................................ 21 1 3 1.00 3 3 0 0 0 0 0
.........................................................AGGGAACTGTTTCTGCTTATATA........................................................................................................ 23 2 1 1.00 1 0 0 1 0 0 0
...........................................................................................................TATCACAGTCGCTGTTCTTTT........................................................ 21 1 3 1.00 3 3 0 0 0 0 0
...........................................................................................................TATCACAGTGGCTGTTGTTTT........................................................ 21 1 3 1.00 3 3 0 0 0 0 0
...........................................................................................................TATCAGAGTGGCTGTTCTTT......................................................... 20 1 3 1.00 3 3 0 0 0 0 0
...........................................................................................................CATCACAGTGGCTGTTCTTTTC....................................................... 22 2 3 1.00 3 3 0 0 0 0 0
.........................................................AGGGAACCGCTGCTGCTGATATA........................................................................................................ 23 2 1 1.00 1 1 0 0 0 0 0
........................................................................................................ATCTATCACAGTGGCTGTTCTTTTT....................................................... 25 2 3 1.00 3 3 0 0 0 0 0
.........................................................AGGGAACTGTTGCTGCTGATATT........................................................................................................ 23 1 1 1.00 1 1 0 0 0 0 0
...........................................................................................................TAGCACAGTGGCTGTTCTTTTT....................................................... 22 1 3 1.00 3 3 0 0 0 0 0
...........................................................................................................TACTACAGTGGCTGTTCTTTT........................................................ 21 2 3 1.00 3 3 0 0 0 0 0
...........................................................................................................TATCACAGCGGCTGTTCTTT......................................................... 20 1 3 1.00 3 2 1 0 0 0 0
...........................................................................................................TATCACAGTTGCTGTTCTTT......................................................... 20 1 3 1.00 3 2 1 0 0 0 0
............................................................................................................AGCACAGTGGCTGTTCTTTT........................................................ 20 1 3 1.00 3 3 0 0 0 0 0
.........................................................AAGGAACTGTTGCTGCTGATAT......................................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0
................................................................................TGATTCTCCCAAAAAAAAAATCACCT.............................................................................. 26 1 1 1.00 1 1 0 0 0 0 0
...........................................................................................................TATTACAGTGGCTGTTCTTTC........................................................ 21 2 4 0.75 3 3 0 0 0 0 0
...........................................................................................................TTTTACAGTGGCTGTTCTTTT........................................................ 21 2 4 0.75 3 3 0 0 0 0 0
...........................................................................................................TATCACAGTGGATGTTCTTGT........................................................ 21 2 4 0.75 3 3 0 0 0 0 0
...........................................................................................................TACCACAGTGACTGTTCTTTTT....................................................... 22 2 3 0.67 2 2 0 0 0 0 0
...........................................................................................................TATCACAGTGGCTGGTGTTTTT....................................................... 22 2 3 0.67 2 0 0 2 0 0 0
.............................................................................................................TCATAGTGGCTGTTCTTTTT....................................................... 20 1 3 0.67 2 2 0 0 0 0 0
...........................................................................................................TATCACAGTGGATGTTCTTTC........................................................ 21 2 3 0.67 2 2 0 0 0 0 0
..........................................................................................................CTATCACAGTGGCTGGTCTTTTT....................................................... 23 2 3 0.67 2 2 0 0 0 0 0
...........................................................................................................TATCACAGTGGCCGTTCTTTT........................................................ 21 1 3 0.67 2 2 0 0 0 0 0
...........................................................................................................TATCACAGTGGCTGTTCATTT........................................................ 21 1 3 0.67 2 2 0 0 0 0 0
...........................................................................................................TATTACAGTGGCTGTTCGTTTT....................................................... 22 2 3 0.67 2 2 0 0 0 0 0
...........................................................................................................CATCACAGTGGCTGTTCTTT......................................................... 20 1 3 0.67 2 2 0 0 0 0 0
...........................................................................................................TGTTACAGTGGCTGTTCTTTTC....................................................... 22 3 3 0.67 2 2 0 0 0 0 0
...........................................................................................................CGTCACAGTGGCTGTTCTTTTT....................................................... 22 2 3 0.67 2 2 0 0 0 0 0
...........................................................................................................TATCGCAGTGGCTGTTCTTTT........................................................ 21 1 3 0.67 2 2 0 0 0 0 0
...........................................................................................................TATTACAGTAGCTGTTCTTTTT....................................................... 22 2 3 0.67 2 2 0 0 0 0 0
...........................................................................................................TATCTCAGTGGCTGTTCTTTTC....................................................... 22 2 3 0.67 2 2 0 0 0 0 0
...........................................................................................................TTCCACAGTGGCTGTTCTTTTT....................................................... 22 2 3 0.67 2 2 0 0 0 0 0
............................................................................................................TTCACAGTGGCTGTTCTTTTT....................................................... 21 1 3 0.67 2 2 0 0 0 0 0
...........................................................................................................TATCACAGTGGCTGTTCGTTT........................................................ 21 1 3 0.67 2 2 0 0 0 0 0
...........................................................................................................TATTACAGTGGATGTTCTTTTT....................................................... 22 2 3 0.67 2 2 0 0 0 0 0
...........................................................................................................TATTACACTGGCTGTTCTTTTT....................................................... 22 2 3 0.67 2 2 0 0 0 0 0
...........................................................................................................TATCACAGTGGCTGTTCTTAT........................................................ 21 1 3 0.67 2 2 0 0 0 0 0
...........................................................................................................TATCCCAGTGGCTGTTCTTTT........................................................ 21 1 3 0.67 2 2 0 0 0 0 0
...........................................................................................................TATTGCAGTGGCTGTTCTTTTT....................................................... 22 2 3 0.67 2 2 0 0 0 0 0
...........................................................................................................TATCACAGTGGCTGATCTTTGT....................................................... 22 2 3 0.67 2 2 0 0 0 0 0
...........................................................................................................TATCACAGTGCCTGTTCTTTTC....................................................... 22 2 3 0.67 2 2 0 0 0 0 0
..............................................................................................................CACAGTGGCTGTTCTTTT........................................................ 18 0 3 0.67 2 2 0 0 0 0 0
...........................................................................................................TGTCACAGTGGCTGTTCTT.......................................................... 19 1 3 0.67 2 2 0 0 0 0 0
...........................................................................................................TGTCACAGTGGCTGTTCTTCTT....................................................... 22 2 3 0.67 2 2 0 0 0 0 0
...........................................................................................................TACCACAGTGGCTGATCTTTTT....................................................... 22 2 3 0.67 2 2 0 0 0 0 0
...........................................................................................................TATCACAGTGGCTGTTCTTTAC....................................................... 22 2 3 0.67 2 2 0 0 0 0 0
...........................................................................................................TATCACAGTGGCTGTTCTTTCT....................................................... 22 1 3 0.67 2 2 0 0 0 0 0
...........................................................................................................TGTCACAGTGGCTGCTCTTTTT....................................................... 22 2 3 0.67 2 2 0 0 0 0 0
...........................................................................................................GATCACAGTGGCTGTTCTTT......................................................... 20 1 3 0.67 2 2 0 0 0 0 0
...........................................................................................................TACCACAGTGGCTGCTCTTTT........................................................ 21 2 3 0.67 2 2 0 0 0 0 0
...........................................................................................................TATTACAGTGGCTGTTCTTTTA....................................................... 22 2 3 0.67 2 2 0 0 0 0 0
...........................................................................................................TATTACGGTGGCTGTTCTTTTT....................................................... 22 2 3 0.67 2 2 0 0 0 0 0
...........................................................................................................TATAACAGTGGCTGTTCTTTT........................................................ 21 1 3 0.67 2 1 0 0 1 0 0
...........................................................................................................TATCACAGTGGCTGTTCATT......................................................... 20 1 3 0.67 2 2 0 0 0 0 0
...........................................................................................................TATCACAGTGGATGTTCTTCTT....................................................... 22 2 3 0.67 2 2 0 0 0 0 0
...........................................................................................................TATCACAGTGGCTGTTCTTTTAA...................................................... 23 2 3 0.67 2 2 0 0 0 0 0
..........................................................................................................ATATCACAGTGGCTGTTCTTT......................................................... 21 0 3 0.67 2 2 0 0 0 0 0
...........................................................................................................TATCACAGTTGCTGTTCTTTTC....................................................... 22 2 3 0.67 2 2 0 0 0 0 0
...........................................................................................................TACTACAGCGGCTGTTCTTTTT....................................................... 22 3 3 0.67 2 2 0 0 0 0 0
...........................................................................................................TATCGCAGTGGCTGTTCTTTTC....................................................... 22 2 3 0.67 2 2 0 0 0 0 0
...........................................................................................................TATCACAGTGGCTGCTCTTT......................................................... 20 1 3 0.67 2 2 0 0 0 0 0
...........................................................................................................TATCACAGGGGCTGTTCTTTTC....................................................... 22 2 3 0.67 2 2 0 0 0 0 0
...........................................................................................................TATCACAGTGGCTGTTCCTTTC....................................................... 22 2 3 0.67 2 2 0 0 0 0 0
...........................................................................................................TATTACAGTGGCTTTTCTTTTT....................................................... 22 2 3 0.67 2 2 0 0 0 0 0
...........................................................................................................TATCACATTGGCTGTTCTTTT........................................................ 21 1 3 0.67 2 2 0 0 0 0 0
...........................................................................................................TTTCACAGCGGCTGTTCTTTTT....................................................... 22 2 3 0.67 2 2 0 0 0 0 0
...........................................................................................................TATCACAGTGGCTTTCTTTT......................................................... 20 3 20 0.60 12 12 0 0 0 0 0
...........................................................................................................TATTACAGTGACTGTTCTTTTT....................................................... 22 2 4 0.50 2 2 0 0 0 0 0
...........................................................................................................TATTACAGTGGCTGTTCTTTTTGT..................................................... 24 2 2 0.50 1 1 0 0 0 0 0
...........................................................................................................TAGCACAGTGGCTGGTCTGTTTG...................................................... 23 3 2 0.50 1 0 0 1 0 0 0
...........................................................................................................TGTCACAGTGGCTGTTCTTTTTGT..................................................... 24 2 2 0.50 1 1 0 0 0 0 0
.........................................................AGGGAACTGCTGCTGCTGAT........................................................................................................... 20 1 2 0.50 1 1 0 0 0 0 0
...........................................................................................................TATCACAGTGGCTGTTCTTTTTTGGGG.................................................. 27 3 2 0.50 1 1 0 0 0 0 0
...........................................................................................................TATCACAGTGGCTGTTCTTTTTCCC.................................................... 25 2 2 0.50 1 1 0 0 0 0 0
...........................................................................................................TACCACAGTGGCTTTTCTTTT........................................................ 21 2 4 0.50 2 2 0 0 0 0 0
...................................ATTTTATTCGGGTGTTAGC.................................................................................................................................. 19 2 2 0.50 1 0 1 0 0 0 0
...........................................................................................................TGTCACAGTTGCTGTTCTTTTT....................................................... 22 2 4 0.50 2 2 0 0 0 0 0
...........................................................................................................TGCCACAGTGGCTGTTCTTTT........................................................ 21 2 4 0.50 2 2 0 0 0 0 0
...........................................................................................................TATCACAGTGGCTGTTCTTTTTGA..................................................... 24 1 2 0.50 1 1 0 0 0 0 0
...........................................................................................................TTTTACAGTGGCTGTTCTTT......................................................... 20 2 4 0.50 2 2 0 0 0 0 0
.........................................................AGGGAACGGTTGCTGCTGATTTA........................................................................................................ 23 2 2 0.50 1 1 0 0 0 0 0
.........................................................GGGGAACTGTTGCTGCTGA............................................................................................................ 19 1 2 0.50 1 0 0 0 0 1 0
...........................................................................................................TATCACAGTGGCTGTTCCTTC........................................................ 21 2 4 0.50 2 2 0 0 0 0 0
...........................................................................................................TACCACAGTGGCTGTTCTTTTTG...................................................... 23 1 2 0.50 1 1 0 0 0 0 0
............................................................................................................AGCACAGTGGCTGTTCTTTTTG...................................................... 22 1 2 0.50 1 1 0 0 0 0 0
........................................................................................................CGCTATCACAGTGGCTGTTCTTTT........................................................ 24 2 2 0.50 1 1 0 0 0 0 0
...........................................................................................................TATCACAGTGGCTGTGCTTTTTA...................................................... 23 2 3 0.33 1 1 0 0 0 0 0
...........................................................................................................TATCACAGTGGCTGATCTTTTC....................................................... 22 2 3 0.33 1 1 0 0 0 0 0
...........................................................................................................CATCACAGTGGATGTTCTTTTT....................................................... 22 2 3 0.33 1 1 0 0 0 0 0
...........................................................................................................TATCAGAGTGGCTGTTCTTTTC....................................................... 22 2 3 0.33 1 1 0 0 0 0 0
...........................................................................................................TATTACAGTGGCTGTTCTTCT........................................................ 21 2 3 0.33 1 1 0 0 0 0 0
..........................................................................................................CTACCACAGTGGCTGTTCTTTTT....................................................... 23 2 3 0.33 1 1 0 0 0 0 0
..............................................................................................................CGCAGTGGCTGTTCTTTTT....................................................... 19 1 3 0.33 1 1 0 0 0 0 0
...........................................................................................................TTTCACAGTGGCTGGTCTTTTT....................................................... 22 2 3 0.33 1 1 0 0 0 0 0
.........................................................................................................CCTATCACAGTGGCTGTTCTT.......................................................... 21 2 3 0.33 1 1 0 0 0 0 0
...........................................................................................................TATCACAGTGGCTGTTCTTTTGA...................................................... 23 2 3 0.33 1 1 0 0 0 0 0
...........................................................................................................TATCACAATGGCTGTTCTTTT........................................................ 21 1 3 0.33 1 1 0 0 0 0 0
...........................................................................................................TATCACAGTGGCTGGTGTTTT........................................................ 21 2 3 0.33 1 0 0 1 0 0 0
...........................................................................................................CTTCACAGTGGCTGTTCTTTTT....................................................... 22 2 3 0.33 1 1 0 0 0 0 0
...........................................................................................................TATCACAGCGGCTGGTCTTTTT....................................................... 22 2 3 0.33 1 0 0 1 0 0 0
...........................................................................................................TATTACAGTGGCCGTTCTTTTT....................................................... 22 2 3 0.33 1 1 0 0 0 0 0
...........................................................................................................TATCACAGTAGCTGTTCTTTTC....................................................... 22 2 3 0.33 1 1 0 0 0 0 0
...........................................................................................................TATCACAGTGGTTGGTCTTTTT....................................................... 22 2 3 0.33 1 0 0 1 0 0 0
...........................................................................................................TATCACAACGGCTGTTCTTTTT....................................................... 22 2 3 0.33 1 1 0 0 0 0 0
...........................................................................................................TATCACAGCGGCTGATCTTTTT....................................................... 22 2 3 0.33 1 1 0 0 0 0 0
............................................................................................................AGCTCAGTGGCTGTTCTTTTT....................................................... 21 2 3 0.33 1 1 0 0 0 0 0
...........................................................................................................TGTCACAGTGGCTGTTTTTTTT....................................................... 22 2 3 0.33 1 1 0 0 0 0 0
...........................................................................................................TATTACAGTGGCTGATCTTTT........................................................ 21 2 3 0.33 1 1 0 0 0 0 0
...........................................................................................................TATCACAGTGGCTGGGATTTTT....................................................... 22 3 3 0.33 1 0 0 1 0 0 0
...........................................................................................................TATCAGAGTGGCTTTTCTTTT........................................................ 21 2 3 0.33 1 1 0 0 0 0 0
...........................................................................................................TATCACAGTGGCTGGGCGTTTT....................................................... 22 3 3 0.33 1 0 0 1 0 0 0
...........................................................................................................CATCACAGTGGCTGTTCT........................................................... 18 1 3 0.33 1 1 0 0 0 0 0
..............................................................................................................CAAAGTGGCTGTTCTTTTT....................................................... 19 1 3 0.33 1 1 0 0 0 0 0
...........................................................................................................TATCACAGTGCCTGTTCTTTTTA...................................................... 23 2 3 0.33 1 1 0 0 0 0 0
...........................................................................................................TATCACAGTGGCAGTTCTTT......................................................... 20 1 3 0.33 1 1 0 0 0 0 0

Anti-sense strand reads

TCTTACAAGACACTAAAAAGCAATAGGCTGCTGTTTATAATAAGGCCACAATCGGGGTCCCTTGACAACGACGACTATATAATAAGAGGGTTTTTTTTTTAGTGGATATAGTGTCACCGACAAGAAAAACCGACGTGGCTGTTCAAGTGGCTAAACAGTAAACACCGTGCGTAAACACAGTGCA

****************************************..((((((.((((..(((((((.(((((((.(((((((.........................)))))))))))))).)))))))..)))))))))).....****************************************** 		Read size # Mismatch Hit Count Total Norm Total V055

head

 M044

female body

 V039

embryo
...................................................................................AAGAGGGGTTTTTTTTTAG.................................................................................. 19 1 2 0.50 1 1 0 0
...................................................................................................................................................TGGCAAAACAGTAAGCACC.................. 19 2 2 0.50 1 1 0 0
.............................................................TTGGCAACGACGACTATATT....................................................................................................... 20 2 4 0.25 1 0 1 0
........................................................................................................................CAAGAATTACCGACGTGCCT............................................ 20 3 7 0.14 1 0 1 0
......................................................................GCGACTATACAATCAGAGG............................................................................................... 19 3 8 0.13 1 0 0 1
.............TAATAAGCAATAGGCTACGG....................................................................................................................................................... 20 3 12 0.08 1 1 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Type Alignment
droAna3 scaffold_13266:9731913-9732096 + dan-mir-6-2 Known_mirbase AGA-----ATGT--TCTGT----GATTT-------------T---------TCGTTAT---------------------------------CCG-ACGAC--AAATAT-T---A-TTCCGGTG--TTAGCCCCAGGGAACTGTTGCTGCTGATATATTATTCTCCCAAAAAAA--------------AA----ATCACCTATATCACAGTGGCTGTTCTTTTTGGCTGCACCGACAAG-TTCACCGATTTGTCATTT----------------------GTG---GCACGCA------TTTGTG---TCACGT-
droBip1 scf7180000396427:874866-875044 + AGA-----ATT-G-----T----GAT-------------TTT---------TCGC------------------------------------CAT-CCGACAGATATTATT---A-TTCCGGTG--TTAACCCCAGGGAACTGTTGCTGCTGATATATTATACTTTC---------------------GAA-CTATCTCCTATATCACAGTGGCTGTTCTTTTTGGTTGCACCGTCAAG-TTCAACAATTTGTCATCT----------------------GTG---GCACGAA------TTTGTGGCATCACCT-
droKik1 scf7180000302679:88769-88937 - ATT-----TGGG--TTTAT----AT------TTTC-----T--------------------------------------------------TAGTGTGAC--AT-TTCTT---C-TACCGTGG--TTAGCCCCAGGGAACTGCTGCTGCTGATATATTATCAA-------------------------G----AATTTCTATATCACAGTGGCTGTTCTTTTTGGTTGCACGGCCAAG-TTCAGCGATTTGTCATCA----------------------GCG---CGGCCTC------AGTGTA---TCATCTC
droFic1 scf7180000454039:847464-847638 - AAT-----GTTTTT-G--TT---TT------TCTTTTCG-T----------TC-------------------------------------GTAT-CTGAC--AAACATCC---A-TTCCGTTT--TTAACCCTAGGGAACTTCTGCTGCTGATATATTATCGA-------------------------A----AACTCGTATATCACAGTGGCTGTTCTTTTTGGTTGCACGGTTAAG-TCCAGCGATTTGTCATCT----------------------GCG---GCACGCA------TTCGTG---TCTCCT-
droEle1 scf7180000491201:2013402-2013568 - CCA-----ATATTT-G--TTTTC---------------ATT--------------------------------------------------TTC-CCGAC--AAATACCC---A-TTCCGTTT--TTAACCACAGGGAACTTCTGCTGCTGATATATTATCAA-------------------------A----AACTTTTATATCACAGTGGCTGTTCTTTTTGGTTGCACGGTCAAG-TCCAGCGATTTGTCATAC----------------------AGG---GAACGGA------TTTGTG---TCACCT-
droRho1 scf7180000780066:74189-74347 + AGT----------------TTTA---------------TTT--------------------------------------------------TTC-CTGAC--AAATACCA---A-GTCTGTTT--TTAACCACAGGGAACTTCTGCTGCTGATATATTATCGA-------------------------A----AACTTTTATATCACAGTGGCTGTTCTTTTTGGTTGCACGGCCAAG-TCCAGCGATTTGTCATCC----------------------AGG---AAACGCA------TTTGTG---TCACCT-
droBia1 scf7180000302143:3059243-3059400 - GAC-----GTT-T--------AG---------------TTC--------------------------------------------------TCC-CTGAC--AAGTATCT---A-TTCCGTTC--TCAACCCCAGGGAACTTCTGCTGCTGATATATTAACTA-------------------------A----AG---CTATATCACAGTGGCTGTTCTTTTTGGTTGCACGGCCAAT-TCCAACGATTTGTCATCT----------------------GTG---GCACGCA------TTTGTG---TCACCT-
droTak1 scf7180000415384:84564-84727 + CCA-----GTC-G-----TTTTA---------------GTT--------------------------------------------------TAT-CTGAC--AAACACCC---A-TTCCGTTT--TTAACCCCAGGGAACTTCTGCTGCTGATATATTATTGA-------------------------A----AACTCCTATATCACAGTGGCTGTTCTTTTTGGTTGCACGGCCAAT-TCCAACGATTTGTCATCT----------------------GTG---GCATGCA------TTTGTG---TCAACT-
droEug1 scf7180000409474:2397358-2397525 + GTT-----TTGT--TTTTT----GTTTTA--------------------------------------------------------------TAT-TTGAC--AAACAACC---A-TGCCGTTT--TTAACCCCAGGGAACCTCTGCTGTTGATATATAATCAG------------------------GA----AACTACTATATCACAGTGGCTGTTCTTTTTGGTTGCACGGCCAAT-TCCATCGATTTGTCATCT----------------------GTG---GCATGCA------TTTGTG---TCACCT-
dm3 chr2R:15548324-15548495 - dme-mir-6-2 Known_mirbase ATT-----ATT-T-AATTT----TTTTT---TTTT-----T--------------------------------------------------TGG-CACAC--GAATAACC---A-TGCCGTTT--TTAACCCAAGGGAACTTCTGCTGCTGATATATTATTGA------------------------AA----AACTACTATATCACAGTGGCTGTTCTTTTTGGTTGCACGGCCAAT-TCCAACGATTTGTCATTT----------------------GTG---GCACGCA------TTTGTG---TCACCT-
droSim2 2r:16195596-16195773 - dsi-mir-6-2 Known_mirbase ACATCATTATT-T-AA---------TTTACTTTTT---TTTT-------------------------------------------------TCG-CACAC--GAATAACC---A-TGCCGTTT--TTAACCCCAGGGAACTTCTGCTGCTGATATATTATTGA------------------------AA----AACTCCTATATCACAGTGGCTGTTCTTTTTGGTTGCACGGCCAAT-TCCAACGATTTGTCATTT----------------------GTG---GCACGCA------TTTGTG---TCACCT-
droSec2 scaffold_1:13063057-13063231 - dse-mir-6-2 Known_mirbase ACATCATTATT-T-AA---------TTTACTTTTT-----T--------------------------------------------------TTG-CACAC--GAATAACC---A-TGCCGTTT--TTAACCCCAGGGAACTTCTGCTGCTGATATATTATTGA------------------------AA----AACTCCTATATCACAGTGGCTGTTCTTTTTGGTTGCACGGCCAAT-TCCAACGATTTGTCATTT----------------------GTG---GCACGCA------TTTGTG---TCACCT-
droYak3 2R:13624296-13624465 + dya-mir-6-2 Known_mirbase TTA-----ATAA--TTTGTT---GC------TTT-----TT--------------------------------------------------TTG-CTCAC--AAGTAACC---A-TACCGTTT--TTAACCGCAGGGAACCTCTGCTGCTGATATATTATTGA------------------------GA----AACTTCTATATCACAGTGGCTGTTCTTTTTGGTTGCACGGCCAAT-TCCAACGATTTGTCATTT----------------------GTG---GCCCGCA------TTTTTG---TCACCT-
droEre2 scaffold_4845:9748578-9748746 - der-mir-6-2 Known_mirbase ATC-----ATT-TT-G--TT---GCCT----TATT-----T--------------------------------------------------TGG-TGCAC--GAAAACCC---A-TACCGTTT--TTAACCCCAGGGAACCTCTGCTGCTGATATATTATTGA-------------------------A----AACTCCTATATCACAGTGGCTGTTCTTTTTGGTTGCACGGCCAAT-TCCAGCGATTTGTCATTT----------------------GTG---GCACGCA------TTTGTG---TCACCT-
dp5 3:12676900-12677082 - dps-mir-6-2 Known_mirbase GGA-----ATC-GC-G----------------------------------------------------------TTGTGCAGTGCTTCCAGTTA-CTGAC--AAATCCCC---G-TGCCGTGTCCCCAACCGCAGGGAACCGCTGCTGCTGATATATTATCCACCCATCTTT---------------GA----CATTTCTATATCACAGTGGCTGTTCTTTTTGGTTGCACGGCCAAG-TCCAACGATTTGTCATCT----------------------CCGCCGCCGCGCA------TTCGC-----------
droPer2 scaffold_2:8906590-8906772 + dpe-mir-6-3 Known_mirbase GGA-----ATC-GC-G----------------------------------------------------------TTGTGCAGTGCTTCCAGTTA-CTCAC--AAATCCCC---G-TGCCGTGTCCCCAACCGCAGGGAACCGCTGCTGCTGATATATTATCCACCCATCTTT---------------GA----CATTTCTATATCACAGTGGCTGTTCTTTTTGGTTGCACGGCCAAG-TCCAACGATTTGTCATCT----------------------CCGCCGCCGCGCA------TTC--------AC---
droWil2 scf2_1100000004514:1651086-1651304 - dwi-mir-6-2 Known_mirbase ACA-----ACA-------------------------------CATTCAAAA----TATTAACAAAAATATTATTTAGTGAAGTGTTTT---------------------TTAAA-GTTTTTGT--TTAACCGCAGGGAACTGTCGCTGCTGATATATA-----TATATTATTGTTATATATAATTTAAAAATGATTTTCTATATCACAGTGGCTGTTCTTTTTGGTTTTACGATCATT-TTCAACAACTTTATTTTT------------AGATTTCTCTGTT---TTACCGT------TTTCTT---TCATTT-
droVir3 scaffold_12875:4112737-4112935 + dvi-mir-6-2 Known_mirbase TGA-----AAAT--TGAAT----AAA------------TAT--------------------------------------------------TTG-CTGAC--AAATTTCTTATG-TGCTATGT--TTAACCGCAGGGAACTGCTGCTGCTGATATACTGTATA--GATTA-TAT-------------------CGATTCCATATCACAGTGGCTGTTCTTTTTGGTTGCATCGCAATC-CACAACAATTTGTCAGCCGAAAGTACTTTTATTATTAACTAAC---TTGTGCA------ATTTGT---TCACTT-
droMoj3 scaffold_6496:20936083-20936277 - dmo-mir-6-2 Known_mirbase CAA-----ATAT--AAAGT----GAAAC-------------ATGAGCACAG----TAT---------------------------------TCG-CAGAC--ATATATCCAGAGAGATTGCGT--TTAACCGCAGGGAACTGCTGCTGCTGATATACTATATG--TATT--TGT-------------CA----GTACTCTATATCACAGTGGCTGTTCTTTTTGGTTGCATCGCAAATAGCCAACAATTTGTC---T----------------------GTG---AAATAAATCTTGAATAGTG---TTATCT-
droGri2 scaffold_5621:3492-3664 + dgr-mir-6-5 Known_mirbase AGT-----AAT----G--T----TAT-----------CA-A--------------------------------------------------CCGCTGCAT--AAATTC-ACCAA-TGCTATGT--TTAACCACAGGGAACTGCTGCTGCTGATATACAACCAT-----ATTTA--------------TA----CACGACTATATCACAGTGGCTGTTCTTTTTGGTTGCATCGCCATT-TGCAACGATTTGTCAGTG----------------------TT----TTATTCT----ATTTTATT---TTATGT-

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droAna3
AGA-----ATGT--TCTGT----GATTT-------------T---------TCGTTAT---------------------------------CCG-ACGAC--AAATAT-T---A-TTCCGGTG--TTAGCCCCAGGGAACTGTTGCTGCTGATATATTATTCTCCCAAAAAAA--------------AA----ATCACCTATATCACAGTGGCTGTTCTTTTTGGCTGCACCGACAAG-TTCACCGATTTGTCATTT----------------------GTG---GCACGCA------TTTGTG---TCACGT-SizeHit CountTotal NormTotalM044

Female-body		M058

Embryo		V039

Embryo		V055

Head		V105

Male-body		V106

Head
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTT...........................................................................................22315043.3345130367447520074
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTT............................................................................................2133049.3391489790392028
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTC...........................................................................................223462.001386013860000
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTT.............................................................................................203276.00828267920082
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTC............................................................................................21357.6717301720001
.....................................................................................................................................AGGGAACTGTTGCTGCTGATATA..............................................................................................................................................................23143.00430348001
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTC.............................................................................................20337.0011101110000
..........................................................................................................................................................................................................ATCACAGTGGCTGTTCTTTTT...........................................................................................21335.6710740670000
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTC..........................................................................................23334.6710401040000
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTA..........................................................................................23333.671013980000
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTT..............................................................................................19317.33528390023
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTG..........................................................................................23214.00282240011
.....................................................................................................................................AGGGAACTGTTGCTGCTGATAT...............................................................................................................................................................22112.0012092100
............................................................................................................................................................................................................CACAGTGGCTGTTCTTTTT...........................................................................................1938.67260260000
...........................................................................................................................................................................................................TCACAGTGGCTGTTCTTTTT...........................................................................................2038.00245190000
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCT...............................................................................................1836.00180180000
.............................................................................................................................................................................................................ACAGTGGCTGTTCTTTTT...........................................................................................1836.00180180000
..........................................................................................................................................................................................................ATCACAGTGGCTGTTCTTTT............................................................................................2036.00187110000
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTA...........................................................................................2235.33160150001
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTG............................................................................................2134.33130130000
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTG...........................................................................................2233.3310190000
............................................................................................................................................................TTATTCTCCCAAAAAAA--------------AA----ATCACCTA.................................................................................................................2713.003030000
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTAA.........................................................................................2433.009170010
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTGT.........................................................................................2422.505050000
.....................................................................................................................................AGGGAACTGTTGCTGCTGAT.................................................................................................................................................................2012.002020000
..........................................................................................................................................................................................................ATCACAGTGGCTGTTCTTT.............................................................................................1932.006330000
.....................................................................................................................................AGGGAACTGTTGCTGCTGATA................................................................................................................................................................2112.002020000
...........................................................................................................................................................................................................TCACAGTGGCTGTTCTTTT............................................................................................1931.675050000
........................................................................................................................................................................................................ATATCACAGTGGCTGTTCTTTT............................................................................................2231.675050000
............................................................................................................................................................TTATTCTCCCAAAAAAA--------------AA----ATCACCT..................................................................................................................2611.001010000
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTC..............................................................................................1931.003030000
..........................................................................................................................................................................................................ATCACAGTGGCTGTTCTTTTC...........................................................................................2131.003030000
....................................................................................................................................CAGGGAACTGTTGCTGCTGATATA..............................................................................................................................................................2411.001010000
.....................................................................................................................................AGGGAACTGTTGCTGCTGATAC...............................................................................................................................................................2211.001010000
.......................................................................................................AATAT-T---A-TTCCGGTG--TTAGCCCC.....................................................................................................................................................................................2311.001010000
.....................................................................................................................................AGGGAACTGTTGCTGCTGATATT..............................................................................................................................................................2311.001010000
............................................................................................................................................................................................................CACAGTGGCTGTTCTTTT............................................................................................1830.672020000
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTAC...........................................................................................2230.672020000
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTAA..........................................................................................2330.672020000
........................................................................................................................................................................................................ATATCACAGTGGCTGTTCTTT.............................................................................................2130.672020000
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTGA.........................................................................................2420.501010000
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTGA..........................................................................................2330.331010000
droBip1
AGA-----ATT-G-----T----GAT-------------TTT---------TCGC------------------------------------CAT-CCGACAGATATTATT---A-TTCCGGTG--TTAACCCCAGGGAACTGTTGCTGCTGATATATTATACTTTC---------------------GAA-CTATCTCCTATATCACAGTGGCTGTTCTTTTTGGTTGCACCGTCAAG-TTCAACAATTTGTCATCT----------------------GTG---GCACGAA------TTTGTGGCATCACCT-SizeHit CountTotal NormTotal
No Reads
droKik1
ATT-----TGGG--TTTAT----AT------TTTC-----T--------------------------------------------------TAGTGTGAC--AT-TTCTT---C-TACCGTGG--TTAGCCCCAGGGAACTGCTGCTGCTGATATATTATCAA-------------------------G----AATTTCTATATCACAGTGGCTGTTCTTTTTGGTTGCACGGCCAAG-TTCAGCGATTTGTCATCA----------------------GCG---CGGCCTC------AGTGTA---TCATCTCSizeHit CountTotal NormTotal
No Reads
droFic1
AAT-----GTTTTT-G--TT---TT------TCTTTTCG-T----------TC-------------------------------------GTAT-CTGAC--AAACATCC---A-TTCCGTTT--TTAACCCTAGGGAACTTCTGCTGCTGATATATTATCGA-------------------------A----AACTCGTATATCACAGTGGCTGTTCTTTTTGGTTGCACGGTTAAG-TCCAGCGATTTGTCATCT----------------------GCG---GCACGCA------TTCGTG---TCTCCT-SizeHit CountTotal NormTotal
No Reads
droEle1
CCA-----ATATTT-G--TTTTC---------------ATT--------------------------------------------------TTC-CCGAC--AAATACCC---A-TTCCGTTT--TTAACCACAGGGAACTTCTGCTGCTGATATATTATCAA-------------------------A----AACTTTTATATCACAGTGGCTGTTCTTTTTGGTTGCACGGTCAAG-TCCAGCGATTTGTCATAC----------------------AGG---GAACGGA------TTTGTG---TCACCT-SizeHit CountTotal NormTotal
No Reads
droRho1
AGT----------------TTTA---------------TTT--------------------------------------------------TTC-CTGAC--AAATACCA---A-GTCTGTTT--TTAACCACAGGGAACTTCTGCTGCTGATATATTATCGA-------------------------A----AACTTTTATATCACAGTGGCTGTTCTTTTTGGTTGCACGGCCAAG-TCCAGCGATTTGTCATCC----------------------AGG---AAACGCA------TTTGTG---TCACCT-SizeHit CountTotal NormTotal
No Reads
droBia1
GAC-----GTT-T--------AG---------------TTC--------------------------------------------------TCC-CTGAC--AAGTATCT---A-TTCCGTTC--TCAACCCCAGGGAACTTCTGCTGCTGATATATTAACTA-------------------------A----AG---CTATATCACAGTGGCTGTTCTTTTTGGTTGCACGGCCAAT-TCCAACGATTTGTCATCT----------------------GTG---GCACGCA------TTTGTG---TCACCT-SizeHit CountTotal NormTotal
No Reads
droTak1
CCA-----GTC-G-----TTTTA---------------GTT--------------------------------------------------TAT-CTGAC--AAACACCC---A-TTCCGTTT--TTAACCCCAGGGAACTTCTGCTGCTGATATATTATTGA-------------------------A----AACTCCTATATCACAGTGGCTGTTCTTTTTGGTTGCACGGCCAAT-TCCAACGATTTGTCATCT----------------------GTG---GCATGCA------TTTGTG---TCAACT-SizeHit CountTotal NormTotal
No Reads
droEug1
GTT-----TTGT--TTTTT----GTTTTA--------------------------------------------------------------TAT-TTGAC--AAACAACC---A-TGCCGTTT--TTAACCCCAGGGAACCTCTGCTGTTGATATATAATCAG------------------------GA----AACTACTATATCACAGTGGCTGTTCTTTTTGGTTGCACGGCCAAT-TCCATCGATTTGTCATCT----------------------GTG---GCATGCA------TTTGTG---TCACCT-SizeHit CountTotal NormTotal
No Reads
dm3
ATT-----ATT-T-AATTT----TTTTT---TTTT-----T--------------------------------------------------TGG-CACAC--GAATAACC---A-TGCCGTTT--TTAACCCAAGGGAACTTCTGCTGCTGATATATTATTGA------------------------AA----AACTACTATATCACAGTGGCTGTTCTTTTTGGTTGCACGGCCAAT-TCCAACGATTTGTCATTT----------------------GTG---GCACGCA------TTTGTG---TCACCT-SizeHit CountTotal NormTotalGSM154618

Ovary		GSM154620

Ovary		GSM154621

Ovary		GSM154622

Ovary		GSM180328

Head		GSM180329

Mixed-body		GSM180330

Embryo		GSM180331

Embryo		GSM180332

Embryo		GSM180333

Embryo		GSM180334

Larvae		GSM180335

Disc		GSM180336

Pupae		GSM180337

S2		GSM239041

Head		GSM239050

Head		GSM239051

S2		GSM239052

S2		GSM246084

Head		GSM266765

S2		GSM280082

Ovary		GSM280083

Ovary		GSM280084

Ovary		GSM280085

Testis		GSM280086

Ovary		GSM280087

S2-NP		GSM280088

S2-NP		GSM312995

Head		GSM313160

Head		GSM313161

Head		GSM313162

Head		GSM313163

Head		GSM313164

Head		GSM313165

Head		GSM343287

Embryo		GSM379050

Ovary		GSM379051

Ovary		GSM379052

Ovary		GSM379053

Ovary		GSM379054

Ovary		GSM379055

Ovary		GSM379056

Ovary		GSM379057

Ovary		GSM379058

Ovary		GSM379059

Ovary		GSM379060

Ovary		GSM379061

Ovary		GSM379062

Ovary		GSM379063

Ovary		GSM379064

Ovary		GSM379065

Ovary		GSM379066

Ovary		GSM379067

Ovary		GSM424739

S2		GSM424740

S2		GSM424741

S2		GSM467729

Female-body		GSM467730

Female-body		GSM467731

Female-body		M002

CS		M003

Male-body		M004

Male-body		M005

ML-DmD32		M006

ML-DmD32		M029

OSC		M030

OSC		M031

OSC		M032

S2-R+		M033

S2-R+		M034

S2-R+		M035

S2-R+		M036

S2-R+		M037

S2-R+		M038

S2-R+		M039

S2-R+		M048

S2-R+		OSS2

OSS		OSS6

OSS		OSS7

OSS		OSS8

OSS		S1

Head		S10

Embryo		S11

Embryo		S12

Embryo		S13

Embryo		S14

Embryo		S15

S2-GMR		S16

Kc		S17

Larvae		S18

Larvae		S19

Pupae		S2

Head		S20

Pupae		S21

Disc		S22

Head		S23

Female-body		S24

Male-body		S25

Larvae		S26

Larvae		S27

Pupae		S28

Pupae		S29

Head		S3

Male-body		S30

S2-GMR		S31

S2		S32

S2		S33

Kc		S34

Kc		S35

Kc		S4

Female-body		S5

Disc		S6

Embryo		S7

Embryo		S8

S2		S9

Embryo		SRR001337

Head		SRR001338

Head		SRR001339

Head		SRR001340

Head		SRR001341

Head		SRR001342

Head		SRR001343

Head		SRR001344

Head		SRR001345

Head		SRR001346

Head		SRR001347

Head		SRR001348

Head		SRR001349

Head		SRR001664

Head		SRR010951

Ovary		SRR010952

Ovary		SRR010953

Ovary		SRR010954

Ovary		SRR010955

Ovary		SRR010956

Ovary		SRR010957

Ovary		SRR010958

Ovary		SRR010959

Ovary		SRR010960

Ovary		SRR014268

Embryo		SRR014269

Embryo		SRR014270

Embryo		SRR014271

Embryo		SRR014272

Embryo		SRR014273

Ovary		SRR014274

Ovary		SRR014275

Ovary		SRR014276

Ovary		SRR014277

Ovary		SRR014278

Ovary		SRR014279

Ovary		SRR014280

Ovary		SRR014281

Ovary		SRR014282

Ovary		SRR023197

S2		SRR023399

S2		SRR023400

S2		SRR023402

S2		SRR023407

S2		SRR029028

S2		SRR029029

S2		SRR029030

S2		SRR029031

S2		SRR029032

S2		SRR029033

S2		SRR029608

Head		SRR029633

Head		SRR030145

gb3		SRR031692

Head		SRR031693

Head		SRR031694

Head		SRR031696

Head		SRR031697

Head		SRR031698

Head		SRR031699

Head		SRR031700

Head		SRR031701

Head		SRR031702

Head		SRR031703

Head		SRR031704

Head		SRR032092

S2		SRR032093

S2		SRR032094

S2		SRR032095

S2-NP		SRR032096

S2-NP		SRR032152

Head		SRR060643

Testis		SRR060644

Ovary		SRR060645

Testis		SRR060646

Ovary		SRR060647

Ovary		SRR060648

Ovary		SRR060649

Ovary		SRR060650

Testis		SRR060651

Ovary		SRR060652

Testis		SRR060653

Ovary		SRR065151

Ovary		SRR065152

Ovary		SRR065153

Ovary		SRR065154

Ovary		SRR065155

Ovary		SRR065800

Ovary		SRR065801

Ovary		SRR065802

Ovary		SRR065803

Ovary		SRR065804

Ovary		SRR065805

Ovary		SRR065806

Ovary		SRR065807

Ovary		SRR097865

S2-NP		SRR097866

S2-NP		SRR097867

S2-NP		SRR298536

Ovary		SRR298537

Ovary		SRR298711

Ovary		SRR298712

Ovary		SRR317110

Ovary		SRR317111

Ovary		SRR317112

Ovary		SRR317113

Ovary		SRR317114

Ovary		SRR317115

Ovary		SRR317116

Ovary		SRR317117

Ovary		SRR341115

S2		SRR341116

S2		SRR341117

S2		SRR341118

S2		SRR351332

Mixed-body		SRR351333

Mixed-body		T004

OSC		T005

CME-L1		V001

Embryo		V002

Embryo		V003

S2		V006

Female-body		V007

Head		V008

S2		V009

CME-L1		V010

ML-DmD20-C5		V011

Sg4		V012

Male-body		V013

Head		V014

DTT		V015

DreRFHV		V018

Kc167		V019

GM2		V020

S2-R+		V021

ML-DmD21		V022

ML-DmD32		V023

Head		V024

Kc167		V025

S2-R+		V026

1182-2H		V027

ML-DmD21		V028

CME-W1-Cl.8+		V029

ML-DmD9		V030

ML-DmD8		V031

GM2		V032

S1		V033

CME-W1-Cl.8+		V034

ML-DmD16-C3		V035

ML-DmD32		V036

ML-DmD20-C5		V037

S2		V038

S2		V063

Ovary		V0632

Ovary		V064

Ovary		V0642

Ovary		V065

Ovary		V0652

Ovary		V066

Ovary		V0662

Ovary		V067

S2-NP		V073

mbn2		V074

S3		V075

ML-DmBG1-C1		V076

ML-DmBG3-C2		V077

Head		V078

Head		V079

Head		V080

Head		V081

Embryo		V082

Embryo		V083

Male-body		V084

Female-body		V085

CME-W2		V086

Female-body		V088

Ovary		V0882

Ovary		V089

Ovary		V0892

Ovary		V090

Male-body		V091

fGS/OSS		V092

Male-body		V093

Male-body		V094

S2-R+		V095

S2-R+		V096

Ovary		V097

Ovary		V098

Ovary		V125

ML-DmD9		V126

CME-L1		V127

G2		V128

S3		V129

ML-DmBG1-C1		V130

ML-DmBG3-C2		V131

ML-DmD16-C3		V132

ML-DmD32		V133

Sg4		V134

ML-DmD8		V135

CME-W2		V136

Male-body		V137

Head		V138

Male-body		V139

Female-body		V140

Female-body		V141

Female-body		V142

Female-body		V144

OSC		V145

S2		V146

S1		V147

1182-2H		V148

mbn2		GSM1528798

follicle cells
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTT...........................................................................................22320801.006240300008135722249235251300000010000000000000000000000000000000000000500000000000000000000000020472170000000000000000000000000110000000000000000000000000000100000000000000000000000010000000000000000000000100000000000000000000000010015459211244212162759343046154161800002000000000000000000000000000000000197080077012300000000637004648179130060059000010003175384212536104243868269366685913240
.....................................................................................................................................AGGGAACTTCTGCTGCTGATATA..............................................................................................................................................................23114804.00148040000001091822520000000000000000000000020000000000000000000000000000000000000000000010003566735100542204010004004000219110014145435579001801213890020001000000200000000001024967614049100010000000000000000000200000100000000001000000000000100000000000000000022001711900040000421100000000000000010000100000010001000000000000000004567000100200000000010000000010000000010010000
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTT............................................................................................2134534.671360400003046283290234340100000000000000000000000000000000000001000020000000000000000000000000015020000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000010000000000000000110033120213534787185631510020300000000000000000000000000000000000000043028028049000000004601738273180020016000000014114203192122726892863001423102157210
.....................................................................................................................................AGGGAACTTCTGCTGCTGATAT...............................................................................................................................................................2212093.002093000000841510000000000000000000000008300000000000000000000000000000000000000000000006158915685150100012000001001200002849000484064000000000000000000000000121477130000000000000000000000000000000000000000000000000000000000000000000000000000015041002000020900000000000000000000000000000000000000000000000005151300000000000000000000000000000000000000000
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTT.............................................................................................203778.672336000000415183400000000000000000000000000000000000000000000001000000000000000000000000001410000100000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000300000000000000000000000000116410359327647014400000000000000000000000000000000000000117050705000010004796813404002000000031024081110015011117437113172927090
.....................................................................................................................................AGGGAACTTCTGCTGCTGAT.................................................................................................................................................................201426.0042600000000100000000000000000000000004020000000000000000000000000000000000000000000000000310000000000000000000000000000300000000000000000000000002400000000000000000000000000000000000000000000000000000000000000000000000000000000001000000001100000000000000001000000000000000000000000000000005100000000000000000000000000000000000000000
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTT..............................................................................................193418.331255000000000000000000000000000000000000000000000000000000001000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000001000000100205110201100080000000000000000000000000000000000000003010310000000003846242015000010000011000100100000002641223295323030
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTG..........................................................................................232281.005620000003121360000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004203249014500200000000000000000000000000000000000000010002000000000003298700000000000000001003000030000003690011010
.....................................................................................................................................AGGGAACTTCTGCTGCTGATATAT.............................................................................................................................................................241269.00269000000330000000000000000000000000010000000000000000000000000000000000000000000000732541350000000000000007000011900050015000000000000000000000000014000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000071000000000000000000000000000000000010000000
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTC..........................................................................................233152.334570000000901000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003014002000000000000000000000000000000000000000201010000000000112630600000000000000000000000000000000000000000
.....................................................................................................................................AGGGAACTTCTGCTGCTGATA................................................................................................................................................................211139.00139000000100000000000000000000000000032000000000000000000000000000000000000000000000067955000000000000000000000000040000000000000000000000000000614000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000042500000000000000000000000000000000100000000
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTA...........................................................................................223125.00375000020241847730000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000140004063004000000000000000000000000000000000000000301040200000000011300000101000000001101000010000101200000010
....................................................................................................................................AAGGGAACTTCTGCTGCTGATATA..............................................................................................................................................................241117.00117000000140000000000000000000000000000000000000000000000000000000000000000000000000472100240000000000000100000083000100300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000000000000000000000
..........................................................................................................AACC---A-TGCCGTTT--TTAACCCA.....................................................................................................................................................................................211112.00112000000230000000000000000000000000000000000000000000000000000000000000000000000000314303000000000000000000000860005001000000000000000000000000013000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000015000000000000000000000000000000000000000000
.........................................................................................................TAACC---A-TGCCGTTT--TTAACCCA.....................................................................................................................................................................................221103.0010300000000000000000000000000000000000000000000000000000000000000000000000000000000016180325000000000000000000000200001090000000000000000000000000212300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000012000000000000000000000000000000000000000000
......................................................................................................................................GGGAACTTCTGCTGCTGATATA..............................................................................................................................................................22184.0084000000240000000000000000000000000000000000000000000000000000000000000000000000000271100220000000000000001000005000000000100000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000008000000000000000000000000000000000000000000
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTA..........................................................................................23371.0021300000012894000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000251133034410008000000000000000000000000000000000000000100101001300000000016200000300000000000000000000000001170000000
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTC...........................................................................................22370.332110000001459311310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000130500010000000000000000000000000000000000000001000000000000000571400000000000000000000000000000000110000000
.....................................................................................................................................AGGGAACTTCTGCTGCTGATATAA.............................................................................................................................................................24153.00530000000000000000000000000000000000100000000000000000000000000000000000000000000005502400000000000000000000000000007000000000000000000000000014030000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000
...........................................................................................................ACC---A-TGCCGTTT--TTAACCCA.....................................................................................................................................................................................20151.00510000000000000000000000000000000000000000000000000000000000000000000000000000000002700090000010000000000000003000200300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006000000000000000000000000000000000000000000
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCT...............................................................................................18350.33151000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001200200000000000000000000000000000000000000010000010000000001112310000000000000000000000000000011240000000
.............................................................................................................................................................................................................ACAGTGGCTGTTCTTTTT...........................................................................................18347.67143000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003010150800000000000000000000000000000000000000000000000101000000000971400000000000000000000000000000000110000000
........................................................................................................ATAACC---A-TGCCGTTT--TTAACCCA.....................................................................................................................................................................................23147.00470000001000000000000000000000000000000000000000000000000000000000000000000000000002543060000000000000000000004000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000
....................................................................................................................................AAGGGAACTTCTGCTGCTGATAT...............................................................................................................................................................23139.00390000000010000000000000000000000000000000000000000000000000000000000000000000000008804500000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000
.....................................................................................................................................AGGGAACTTCTGCTGCTGATATC..............................................................................................................................................................23138.00380000000000000000000000000000000000000000000000000000000000000000000000000000000002200000000000000000000000010000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000032000000000000000000000000000000000000000000
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTAA.........................................................................................24335.00105000010101000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000002211310202003000000000000000000000000000000000000000809012040000000001000000301000000000000010000000000000000000
.............................................................................................................C---A-TGCCGTTT--TTAACCCA.....................................................................................................................................................................................18130.00300000000000000000000000000000000000000000000000000000000000000000000000000000000001100020000000000000000010002000200700000000000000000000000011000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000
..........................................................................................................................................................................................................ATCACAGTGGCTGTTCTTTTT...........................................................................................21329.67890000000310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020004153002000000000000000000000000000000000000000102000000000000057400000000000000000110000000000010010000000
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTG...........................................................................................22325.007500001082812500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000204000000000000000000000000000000000000000000000100000000000009400000000000000000000000000000000100000000
.....................................................................................................................................AGGGAACTTCTGCTGCTGATATATT............................................................................................................................................................25120.00200000000000000000000000000000000000000000000000000000000000000000000000000000000001000010000000000000000000000000000000000000000000000000000001200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006000000000000000000000000000000000000000000
.....................................................................................................................................AGGGAACTTCTGCTGCTGA..................................................................................................................................................................19120.00200000000000000000000000000000000000500000000000000000000000000000000000000000000001000000000000010000000000000000000000000000000000000000000012000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000
.....................................................................................................................................AGGGAACTTCTGCTGCTGATATG..............................................................................................................................................................23119.0019000000011100000000000000000000000000000000000000000000000000000000000000000000000111040000000000000000000010000100500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000
......................................................................................................................................GGGAACTTCTGCTGCTGATAT...............................................................................................................................................................21117.00170000000000000000000000000000000000000000000000000000000000000000000000000000000001401020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTA............................................................................................21316.6750000010515131000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000004000000000000000000000000000000001000000000
.....................................................................................................................................AGGGAACTTCTGCTGCTGATATT..............................................................................................................................................................23116.0016000000210000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000002000000100000000000000000000000003200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000
............................................................................................................CC---A-TGCCGTTT--TTAACCCA.....................................................................................................................................................................................19115.0015000000000000000000000000000000000000000000000000000000000000000000000000000000000200160000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000010000000
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTC............................................................................................21313.67410000202427000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001001000000000000000000000000000000000000000000000000000000000015700000000000000000000000000000000000000000
....................................................................................................................................AAGGGAACTTCTGCTGCTGATA................................................................................................................................................................22112.0012000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000090000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000
........................................................................................................................................................................................................ATATCACAGTGGCTGTTCTTTT............................................................................................22311.673500000001001000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010006000000000000000000000000000000000000000000000000000000000000014100000000000000000000000000000000100000000
droSim2
ACATCATTATT-T-AA---------TTTACTTTTT---TTTT-------------------------------------------------TCG-CACAC--GAATAACC---A-TGCCGTTT--TTAACCCCAGGGAACTTCTGCTGCTGATATATTATTGA------------------------AA----AACTCCTATATCACAGTGGCTGTTCTTTTTGGTTGCACGGCCAAT-TCCAACGATTTGTCATTT----------------------GTG---GCACGCA------TTTGTG---TCACCT-SizeHit CountTotal NormTotalM023

Head		M024

Male-body		M025

Embryo		M053

Female-body		O001

Testis		O002

Head		SRR553485

Ovary		SRR553486

Ovary		SRR553487

Ovary		SRR553488

Ovary		SRR618934

Ovary		V044

Embryo		SRR902008

Ovary		SRR902009

Testis		SRR1275487

Male larvae		SRR1275485

Male prepupae		SRR1275483

Male prepupae
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTT...........................................................................................223816.00244800797972722282537553601315000
.....................................................................................................................................AGGGAACTTCTGCTGCTGATATA..............................................................................................................................................................231289.002890033000701159703700000
.....................................................................................................................................AGGGAACTTCTGCTGCTGATAT...............................................................................................................................................................221186.00186003210110864402100000
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTT............................................................................................213162.6748810811199451247312154104000
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTG..........................................................................................23266.0013200851024018751000000
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTT..............................................................................................19361.3318400212713562641000000
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTT.............................................................................................20350.671520033123571614952001000
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTA..........................................................................................23350.671520001009061000000000
.....................................................................................................................................AGGGAACTTCTGCTGCTGATA................................................................................................................................................................21149.004900150000116110600000
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTAA.........................................................................................24343.331300000007852000000000
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCT...............................................................................................18339.001170000610514001000000
................................................................................................................................................................................................................GTGGCTGTTCTTTTT...........................................................................................15318.67560000000027281000000
..........................................................................................................................................................................................................ATCACAGTGGCTGTTCTTTTT...........................................................................................21318.3355000550000000000000
.........................................................................................................................................................................................................TATCACAGTGGCTGT..................................................................................................15315.00450000000012302010000
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTAA..........................................................................................23313.33400000002119000000000
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTAAA.........................................................................................24312.67380000002117000000000
.....................................................................................................................................AGGGAACTTCTGCTGCTGAT.................................................................................................................................................................2018.00800100000320200000
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTA...........................................................................................2237.3322000000128101000000
.....................................................................................................................................AGGGAACTTCTGCTGCTGATATAA.............................................................................................................................................................2417.00700100000320100000
.........................................................................................................................................................................................................TATCACAGTGGCTGTT.................................................................................................1632.67800000010052000000
..........................................................................................................................................................................................................ATCACAGTGGCTGTTCTTTT............................................................................................2032.67800053000000000000
..........................................................................................................................................................................................................ATCACAGTGGCTGTTCTTTTTG..........................................................................................2222.50500040001000000000
............................................................................................................................................................TTATTGA------------------------AA----AACTCCTA.................................................................................................................1712.00200000000020000000
.....................................................................................................................................AGGGAACTTCTGCTGCTGATATAAA............................................................................................................................................................2512.00200000000200000000
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTA............................................................................................2131.33400000022000000000
...........................................................................................................................................................................................................TCACAGTGGCTGTTCTTTTT...........................................................................................2031.33400030010000000000
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTGA.........................................................................................2421.00200000011000000000
.....................................................................................................................................AGGGAACTTCTGCTGCTGATATAC.............................................................................................................................................................2411.00100000000010000000
.....................................................................................................................................AGGGAACTTCTGCTGCTGATATATTAT..........................................................................................................................................................2711.00100000000010000000
..........................................................................................................AACC---A-TGCCGTTT--TTAACCCA.....................................................................................................................................................................................2111.00100000010000000000
.....................................................................................................................................AGGGAACTTCTGCTGCTGATAA...............................................................................................................................................................2211.00100100000000000000
.......................................................................................................................................GGAACTTCTGCTGCTGATATA..............................................................................................................................................................2111.00100000000100000000
................................................................................................................................................................................................................GTGGCTGTTCTTTTTG..........................................................................................1621.00200000000020000000
.....................................................................................................................................AGGGAACTTCTGCTGCTGATATAT.............................................................................................................................................................2411.00100100000000000000
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTGGC........................................................................................2511.00100010000000000000
.....................................................................................................................................AGGGAACTTCTGCTGCTGA..................................................................................................................................................................1911.00100100000000000000
.....................................................................................................................................AGGGAACTTCTGCTGCTGG..................................................................................................................................................................1911.00100100000000000000
....................................................................................................................................CAGGGAACTTCTGCTGCTGATAT...............................................................................................................................................................2311.00100000000000100000
.....................................................................................................................................AGGGAACTTCTGCTGCTGATATATT............................................................................................................................................................2511.00100000000100000000
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTC.............................................................................................2030.67200200000000000000
..........................................................................................................................................................................................................ATCACAGTGGCTGTTCTTTTTA..........................................................................................2230.67200000002000000000
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTG............................................................................................2130.67200020000000000000
.............................................................................................................................................................................................................ACAGTGGCTGTTCTTTTT...........................................................................................1830.67200010010000000000
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTC...........................................................................................2230.67200010010000000000
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTAAA..........................................................................................2340.50200000011000000000
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTGC.........................................................................................2420.50100100000000000000
droSec2
ACATCATTATT-T-AA---------TTTACTTTTT-----T--------------------------------------------------TTG-CACAC--GAATAACC---A-TGCCGTTT--TTAACCCCAGGGAACTTCTGCTGCTGATATATTATTGA------------------------AA----AACTCCTATATCACAGTGGCTGTTCTTTTTGGTTGCACGGCCAAT-TCCAACGATTTGTCATTT----------------------GTG---GCACGCA------TTTGTG---TCACCT-SizeHit CountTotal NormTotalM054

Female-body		V113

Male-body		V114

Embryo		V115

Head
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTT...........................................................................................22327140.338142117131478922772
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTT............................................................................................2138065.33241962271023821138
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTG..........................................................................................2323579.5071591011697978
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTT.............................................................................................2031417.004251233419035
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTT..............................................................................................193259.677793075719
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTA..........................................................................................233126.33379203689
.............................................................................................................................................................................................................ACAGTGGCTGTTCTTTTT...........................................................................................183112.00336003342
..........................................................................................................................................................................................................ATCACAGTGGCTGTTCTTTTT...........................................................................................21392.0027614701281
.....................................................................................................................................AGGGAACTTCTGCTGCTGATATA..............................................................................................................................................................23172.007220700
.....................................................................................................................................AGGGAACTTCTGCTGCTGATAT...............................................................................................................................................................22171.007120681
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCT...............................................................................................18367.33202101965
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTGA.........................................................................................24254.50109101080
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTA...........................................................................................22332.339720941
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTC...........................................................................................22329.008710851
..........................................................................................................................................................................................................ATCACAGTGGCTGTTCTTTTTG..........................................................................................22222.5045160290
...........................................................................................................................................................................................................TCACAGTGGCTGTTCTTTTT...........................................................................................20319.6759100481
.............................................................................................................................................................................................................ACAGTGGCTGTTCTTTTTG..........................................................................................19216.503300330
.....................................................................................................................................AGGGAACTTCTGCTGCTGATA................................................................................................................................................................21116.001600160
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTAA.........................................................................................24314.004200411
..........................................................................................................................................................................................................ATCACAGTGGCTGTTCTTTT............................................................................................20311.3334230110
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTC..........................................................................................23311.003310320
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTG...........................................................................................2237.332220200
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTGG.........................................................................................2417.0071060
............................................................................................................................................................................................................CACAGTGGCTGTTCTTTTT...........................................................................................1936.331920170
...........................................................................................................................................................................................................TCACAGTGGCTGTTCTTTT............................................................................................1935.331620140
.....................................................................................................................................AGGGAACTTCTGCTGCTGAT.................................................................................................................................................................2015.0050050
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTGC.........................................................................................2425.001000100
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTA............................................................................................2134.331300130
..........................................................................................................AACC---A-TGCCGTTT--TTAACCCC.....................................................................................................................................................................................2114.0040040
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTC............................................................................................2133.671100110
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTAA..........................................................................................2333.331000100
..........................................................................................................................................................................................................ATCACAGTGGCTGTTCTTTTTGG.........................................................................................2313.0030030
............................................................................................................................................................................................................CACAGTGGCTGTTCTTTT............................................................................................1832.3371060
..........................................................................................................................................................................................................ATCACAGTGGCTGTTCTTT.............................................................................................1932.3375020
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTG............................................................................................2132.0062040
........................................................................................................ATAACC---A-TGCCGTTT--TTAACCCC.....................................................................................................................................................................................2312.0020020
........................................................................................................................................................................................................ATATCACAGTGGCTGTTCTTTT............................................................................................2231.0030030
.....................................................................................................................................AGGGAACTTCTGCTGCTGATATATT............................................................................................................................................................2511.0010010
.....................................................................................................................................AGGGAACTTCTGCTGCTGATATAT.............................................................................................................................................................2411.0010010
............................................................................................................................................................................................................CACAGTGGCTGTTCTTTTTG..........................................................................................2021.0021010
..........................................................................................................................................................................................................ATCACAGTGGCTGTTCTTTTTA..........................................................................................2231.0030030
..........................................................................................................................................................................................................ATCACAGTGGCTGTTCTTTTTGGT........................................................................................2411.0010010
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTA.............................................................................................2031.0030030
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTC.............................................................................................2031.0030021
.....................................................................................................................................AGGGAACTTCTGCTGCTGATATAG.............................................................................................................................................................2411.0010010
...........................................................................................................................................................................................................TCACAGTGGCTGTTCTTTTTG..........................................................................................2121.0021010
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTAA...........................................................................................2230.6720020
droYak3
TTA-----ATAA--TTTGTT---GC------TTT-----TT--------------------------------------------------TTG-CTCAC--AAGTAACC---A-TACCGTTT--TTAACCGCAGGGAACCTCTGCTGCTGATATATTATTGA------------------------GA----AACTTCTATATCACAGTGGCTGTTCTTTTTGGTTGCACGGCCAAT-TCCAACGATTTGTCATTT----------------------GTG---GCCCGCA------TTTTTG---TCACCT-SizeHit CountTotal NormTotalM026

Head		M043

Female-body		M056

Embryo		V046

Embryo		V052

Head		V058

Head		V120

Male-body		SRR1275488

Male larvae		SRR1275486

Male prepupae		SRR1275484

Male prepupae		GSM1528802

follicle cells
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTT...........................................................................................22388528.672655860234265335500120000
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTT............................................................................................21315870.00476100634753810080000
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTC...........................................................................................2232566.67770000770000000000
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTT.............................................................................................2031006.673020015300310010000
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTC............................................................................................213276.008280082800000000
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTG..........................................................................................232209.004180241600000000
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTC..........................................................................................233165.004950149400000000
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTC.............................................................................................203138.334150041500000000
.....................................................................................................................................AGGGAACCTCTGCTGCTGATATA..............................................................................................................................................................231120.001200077430000000
..........................................................................................................................................................................................................ATCACAGTGGCTGTTCTTTTT...........................................................................................21392.002760926700000000
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTA..........................................................................................23390.332710226900000000
.....................................................................................................................................AGGGAACCTCTGCTGCTGATAT...............................................................................................................................................................22171.00710052180100000
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTT..............................................................................................19362.001860218400000000
.............................................................................................................................................................................................................ACAGTGGCTGTTCTTTTT...........................................................................................18347.001410114000000000
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTA...........................................................................................22331.3394009400000000
...........................................................................................................................................................................................................TCACAGTGGCTGTTCTTTTT...........................................................................................20322.3367006700000000
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTGC.........................................................................................24221.5043004300000000
............................................................................................................................................................................................................CACAGTGGCTGTTCTTTTT...........................................................................................19321.0063016200000000
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTG............................................................................................21316.6750005000000000
.....................................................................................................................................AGGGAACCTCTGCTGCTGATA................................................................................................................................................................21113.001300940000000
..........................................................................................................................................................................................................ATCACAGTGGCTGTTCTTTT............................................................................................20312.6738023600000000
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCT...............................................................................................1837.3322012100000000
.....................................................................................................................................AGGGAACCTCTGCTGCTGATAC...............................................................................................................................................................2217.00700700000000
........................................................................................................................................................................................................ATATCACAGTGGCTGTTCTTTT............................................................................................2235.6717001700000000
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTG...........................................................................................2235.6717001700000000
..........................................................................................................................................................................................................ATCACAGTGGCTGTTCTTTTC...........................................................................................2134.6714001400000000
..........................................................................................................................................................................................................ATCACAGTGGCTGTTCTTTTTG..........................................................................................2224.50900900000000
...........................................................................................................................................................................................................TCACAGTGGCTGTTCTTTTTGG.........................................................................................2214.00400400000000
...........................................................................................................ACC---A-TACCGTTT--TTAACCGC.....................................................................................................................................................................................2014.00400310000000
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTGC...........................................................................................2233.00900900000000
............................................................................................................................................................................................................CACAGTGGCTGTTCTTTT............................................................................................1832.67800800000000
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTC..............................................................................................1932.67800800000000
...........................................................................................................................................................................................................TCACAGTGGCTGTTCTTTT............................................................................................1932.33701600000000
...........................................................................................................................................................................................................TCACAGTGGCTGTTCTTTTTGGTT.......................................................................................2412.00200200000000
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTA............................................................................................2132.00600600000000
.....................................................................................................................................AGGGAACCTCTGCTGCTGAT.................................................................................................................................................................2012.00200110000000
...........................................................................................................................................................................................................TCACAGTGGCTGTTCTTTTTGGT........................................................................................2312.00200200000000
..........................................................................................................................................................................................................ATCACAGTGGCTGTTCTTTTTGG.........................................................................................2312.00200200000000
............................................................................................................CC---A-TACCGTTT--TTAACCGC.....................................................................................................................................................................................1912.00200200000000
droEre2
ATC-----ATT-TT-G--TT---GCCT----TATT-----T--------------------------------------------------TGG-TGCAC--GAAAACCC---A-TACCGTTT--TTAACCCCAGGGAACCTCTGCTGCTGATATATTATTGA-------------------------A----AACTCCTATATCACAGTGGCTGTTCTTTTTGGTTGCACGGCCAAT-TCCAGCGATTTGTCATTT----------------------GTG---GCACGCA------TTTGTG---TCACCT-SizeHit CountTotal NormTotalM055

Female-body		M057

Embryo		V060

Head		V040

Embryo		V107

Male-body		V108

Head		GSM1528801

follicle cells
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTT...........................................................................................22310965.6732897490027970056160
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTT............................................................................................2132527.677583713686301510
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTC...........................................................................................223198.00594958500000
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTT.............................................................................................203195.675877550501240
..........................................................................................................................................................................................................ATCACAGTGGCTGTTCTTTTT...........................................................................................213131.673953702500000
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTG..........................................................................................232114.002284518200100
.....................................................................................................................................AGGGAACCTCTGCTGCTGATATA..............................................................................................................................................................23144.00442011013000
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTC............................................................................................21326.007817700000
.....................................................................................................................................AGGGAACCTCTGCTGCTGATAT...............................................................................................................................................................22125.00257909000
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTC..........................................................................................23319.005715600000
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTA..........................................................................................23318.6756163800020
..........................................................................................................................................................................................................ATCACAGTGGCTGTTCTTTT............................................................................................20317.3352411100000
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTC.............................................................................................20316.334904801000
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTT..............................................................................................19314.3343103001110
...........................................................................................................................................................................................................TCACAGTGGCTGTTCTTTTT...........................................................................................20310.673223900000
.....................................................................................................................................AGGGAACCTCTGCTGCTGATA................................................................................................................................................................2118.0081205000
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTGC.........................................................................................2425.501101100000
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTA...........................................................................................2235.331661000000
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTGG.........................................................................................2413.0033000000
..........................................................................................................................................................................................................ATCACAGTGGCTGTTCTTTTTG..........................................................................................2222.5052300000
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTG............................................................................................2132.3374300000
..........................................................................................................................................................................................................ATCACAGTGGCTGTTCTTT.............................................................................................1932.0066000000
...........................................................................................................CCC---A-TACCGTTT--TTAACCCC.....................................................................................................................................................................................2012.0020200000
............................................................................................................................................................................................................CACAGTGGCTGTTCTTTTT...........................................................................................1932.0061500000
...........................................................................................................................................................................................................TCACAGTGGCTGTTCTTTTTGG.........................................................................................2212.0020200000
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTGGCA.......................................................................................2612.0021100000
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTCC.........................................................................................2431.6750500000
.............................................................................................................................................................................................................ACAGTGGCTGTTCTTTTT...........................................................................................1831.3340400000
........................................................................................................................................................................................................ATATCACAGTGGCTGTTCTTTT............................................................................................2231.3341300000
........................................................................................................................................................................................................ATATCACAGTGGCTGTTCTTTTT...........................................................................................2331.3342200000
.....................................................................................................................................AGGGAACCTCTGCTGCTGATAC...............................................................................................................................................................2211.0010100000
.......................................................................................................................................GGAACCTCTGCTGCTGATATT..............................................................................................................................................................2111.0010100000
.....................................................................................................................................AGGGAACCTCTGCTGCTGAT.................................................................................................................................................................2011.0010001000
......................................................................................................................................GGGAACCTCTGCTGCTGATATA..............................................................................................................................................................2211.0011000000
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTCC...........................................................................................2231.0030300000
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCT...............................................................................................1831.0032100000
......................................................................................................................................GGGAACCTCTGCTGCTGATAT...............................................................................................................................................................2111.0011000000
....................................................................................................................................CAGGGAACCTCTGCTGCTGATAT...............................................................................................................................................................2311.0011000000
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTA............................................................................................2131.0030300000
............................................................................................................................................................................................................CACAGTGGCTGTTCTTTT............................................................................................1830.6720200000
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTAA.........................................................................................2430.6722000000
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTG...........................................................................................2230.6722000000
...........................................................................................................................................................................................................TCACAGTGGCTGTTCTTTT............................................................................................1930.6720200000
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTACC..........................................................................................2330.6720200000
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTCC..........................................................................................2330.6720200000
..........................................................................................................................................................................................................ATCACAGTGGCTGTTCTTTTG...........................................................................................2130.6722000000
dp5
GGA-----ATC-GC-G----------------------------------------------------------TTGTGCAGTGCTTCCAGTTA-CTGAC--AAATCCCC---G-TGCCGTGTCCCCAACCGCAGGGAACCGCTGCTGCTGATATATTATCCACCCATCTTT---------------GA----CATTTCTATATCACAGTGGCTGTTCTTTTTGGTTGCACGGCCAAG-TCCAACGATTTGTCATCT----------------------CCGCCGCCGCGCA------TTCGC-----------SizeHit CountTotal NormTotalM022

Male-body		M040

Female-body		M059

Embryo		M062

Head		V043

Embryo		V051

Head		V112

Male-body		SRR902010

Ovary		SRR902011

Testis		SRR902012

CNS imaginal disc
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTT...........................................................................................22338201.331146040681510770178307000
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTT............................................................................................2136091.0018273012371700029205000
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTC...........................................................................................2231760.0052800452724000000
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTT.............................................................................................203403.001209013410741000000
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTG..........................................................................................232249.004980794190000000
..........................................................................................................................................................................................................ATCACAGTGGCTGTTCTTTTT...........................................................................................213194.005820505770000000
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTC............................................................................................213169.33508025060000000
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTC..........................................................................................233159.004770124641000000
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTA..........................................................................................233100.003000222770001000
.....................................................................................................................................AGGGAACCGCTGCTGCTGATATA..............................................................................................................................................................23180.0080054802700000
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTC.............................................................................................20362.00186001842000000
..........................................................................................................................................................................................................ATCACAGTGGCTGTTCTTTT............................................................................................20340.001200106140000000
........................................................................................................................................................................................................ATATCACAGTGGCTGTTCTTTT............................................................................................22330.339107840000000
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTT..............................................................................................19327.6783024590000000
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTGC.........................................................................................24226.505300530000000
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTA...........................................................................................22324.677406680000000
...........................................................................................................................................................................................................TCACAGTGGCTGTTCTTTTT...........................................................................................20317.0051032190000000
........................................................................................................................................................................................................ATATCACAGTGGCTGTTCTTTTT...........................................................................................23313.674108330000000
.....................................................................................................................................AGGGAACCGCTGCTGCTGATAT...............................................................................................................................................................22113.001300120100000
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTCC.........................................................................................24310.673206260000000
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTG...........................................................................................22310.333109220000000
..........................................................................................................................................................................................................ATCACAGTGGCTGTTCTTT.............................................................................................1938.332502230000000
............................................................................................................................................................TTATCCACCCATCTTT---------------GA----CATTTCT..................................................................................................................2518.0080050300000
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTG............................................................................................2138.002401230000000
............................................................................................................................................................................................................CACAGTGGCTGTTCTTTTT...........................................................................................1937.6723010130000000
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCT...............................................................................................1837.002108130000000
.....................................................................................................................................AGGGAACCGCTGCTGCTGATAC...............................................................................................................................................................2216.0060060000000
........................................................................................................................................................................................................ATATCACAGTGGCTGTTCTTT.............................................................................................2135.331600160000000
.............................................................................................................................................................................................................ACAGTGGCTGTTCTTTTT...........................................................................................1835.001503120000000
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTGA.........................................................................................2424.5090090000000
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTAA.........................................................................................2434.001202100000000
.....................................................................................................................................AGGGAACCGCTGCTGCTGATA................................................................................................................................................................2114.0040030100000
..........................................................................................................................................................................................................ATCACAGTGGCTGTTCTTTTTG..........................................................................................2224.0080710000000
.....................................................................................................................................AGGGAACCGCTGCTGCTGATATC..............................................................................................................................................................2313.0030010000020
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTCC..........................................................................................2333.0090180000000
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTAA..........................................................................................2332.0060230001000
.........................................................................................................TCCCC---G-TGCCGTGTCCCCAACCGC.....................................................................................................................................................................................2412.0020020000000
..........................................................................................................................................................................................................ATCACAGTGGCTGTTCTTTTC...........................................................................................2132.0060150000000
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTGG.........................................................................................2412.0020110000000
.....................................................................................................................................AGGGAACCGCTGCTGCTGA..................................................................................................................................................................1912.0020000000020
.....................................................................................................................................AGGGAACCGCTGCTGCTGAT.................................................................................................................................................................2012.0020000101000
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTC..............................................................................................1931.6750050000000
..........................................................................................................................................................................................................ATCACAGTGGCTGTTCTT..............................................................................................1831.6750500000000
...........................................................................................................................................................................................................TCACAGTGGCTGTTCTTTTTG..........................................................................................2121.5030120000000
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTCC...........................................................................................2231.3340040000000
..........................................................................................................................................................................................................ATCACAGTGGCTGTTCTTTTTC..........................................................................................2231.3340310000000
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTCCC........................................................................................2531.3340040000000
........................................................................................................................................................................................................ATATCACAGTGGCTGTTCTTTC............................................................................................2231.0030030000000
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTA............................................................................................2131.0030030000000
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTGGGAA......................................................................................2711.0010100000000
........................................................................................................ATCCCC---G-TGCCGTGTCCCCAACCGC.....................................................................................................................................................................................2511.0010010000000
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTGGC........................................................................................2511.0010010000000
...........................................................................................................................................................................................................TCACAGTGGCTGTTCTTTTTGC.........................................................................................2221.0020020000000
............................................................................................................................................................TTATCCACCCATCTTT---------------GA----CATTTCTA.................................................................................................................2611.0010000100000
.....................................................................................................................................AGGGAACCGCTGCTGCTGATATTC.............................................................................................................................................................2411.0010000000010
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTAA...........................................................................................2231.0030020001000
droPer2
GGA-----ATC-GC-G----------------------------------------------------------TTGTGCAGTGCTTCCAGTTA-CTCAC--AAATCCCC---G-TGCCGTGTCCCCAACCGCAGGGAACCGCTGCTGCTGATATATTATCCACCCATCTTT---------------GA----CATTTCTATATCACAGTGGCTGTTCTTTTTGGTTGCACGGCCAAG-TCCAACGATTTGTCATCT----------------------CCGCCGCCGCGCA------TTC--------AC---SizeHit CountTotal NormTotalM021

Embryo		M042

Female-body		V042

Embryo		V050

Head		V057

Head		V111

Male-body
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTT...........................................................................................223146.00438941300115
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTT............................................................................................21325.00758620005
..........................................................................................................................................................................................................ATCACAGTGGCTGTTCTTTTT...........................................................................................21314.67440440000
.....................................................................................................................................AGGGAACCGCTGCTGCTGATAT...............................................................................................................................................................22112.00121002000
.....................................................................................................................................AGGGAACCGCTGCTGCTGATATA..............................................................................................................................................................2318.008404000
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTG..........................................................................................2325.0010070003
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTT.............................................................................................2035.0015680001
..........................................................................................................................................................................................................ATCACAGTGGCTGTTCTTTT............................................................................................2033.009090000
.....................................................................................................................................AGGGAACCGCTGCTGCTGATATAA.............................................................................................................................................................2411.001100000
..........................................................................................................................................................................................................ATCACAGTGGCTGTTCTTTTTG..........................................................................................2221.002020000
.....................................................................................................................................AGGGAACCGCTGCTGCTGATA................................................................................................................................................................2111.001001000
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTT..............................................................................................1931.003030000
...........................................................................................................................................................................................................TCACAGTGGCTGTTCTTTTT...........................................................................................2030.672020000
...........................................................................................................................................................................................................TCACAGTGGCTGTTCTTTTTGA.........................................................................................2220.501010000
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTG...........................................................................................2230.331010000
............................................................................................................................................................................................................CACAGTGGCTGTTCTTTTT...........................................................................................1930.331010000
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTA..........................................................................................2330.331010000
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTA...........................................................................................2230.331010000
...........................................................................................................................................................................................................TCACAGTGGCTGTTCTTTT............................................................................................1930.331010000
........................................................................................................................................................................................................ATATCACAGTGGCTGTTCTTTT............................................................................................2230.331010000
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTC.............................................................................................2030.331100000
droWil2
ACA-----ACA-------------------------------CATTCAAAA----TATTAACAAAAATATTATTTAGTGAAGTGTTTT---------------------TTAAA-GTTTTTGT--TTAACCGCAGGGAACTGTCGCTGCTGATATATA-----TATATTATTGTTATATATAATTTAAAAATGATTTTCTATATCACAGTGGCTGTTCTTTTTGGTTTTACGATCATT-TTCAACAACTTTATTTTT------------AGATTTCTCTGTT---TTACCGT------TTTCTT---TCATTT-SizeHit CountTotal NormTotalM020

Head		M045

Female-body		V117

Male-body		V118

Embryo		V119

Head
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTT...........................................................................................22335155.671054670180701036555
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTT............................................................................................2138217.002465103441243042
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTT.............................................................................................2031168.673506059534411
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTA..........................................................................................2331099.333298010032880
.....................................................................................................................................AGGGAACTGTCGCTGCTGATATA..............................................................................................................................................................231333.003330213300
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTT..............................................................................................193320.009600609504
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTAA.........................................................................................243217.006510506460
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTA...........................................................................................223189.675690405650
.....................................................................................................................................AGGGAACTGTCGCTGCTGATAT...............................................................................................................................................................221136.001360101350
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCT...............................................................................................183128.333850303820
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTG..........................................................................................23283.501670601610
..........................................................................................................................................................................................................ATCACAGTGGCTGTTCTTTTT...........................................................................................21370.3321101430680
.....................................................................................................................................AGGGAACTGTCGCTGCTGATA................................................................................................................................................................21162.0062010610
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTAAA........................................................................................25346.001380001380
.............................................................................................................................................................................................................ACAGTGGCTGTTCTTTTT...........................................................................................18345.001350101340
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTAA..........................................................................................23341.671250001250
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTC...........................................................................................22340.331210101200
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTC..........................................................................................23332.3397000970
.....................................................................................................................................AGGGAACTGTCGCTGCTGAT.................................................................................................................................................................20119.0019000190
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTG...........................................................................................22318.6756000560
..........................................................................................................................................................................................................ATCACAGTGGCTGTTCTTTT............................................................................................20316.00480310170
.....................................................................................................................................AGGGAACTGTCGCTGCTGATATAA.............................................................................................................................................................24111.0011000110
...........................................................................................................................................................................................................TCACAGTGGCTGTTCTTTTT...........................................................................................20310.33310120190
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTA............................................................................................2139.3328010270
........................................................................................................................................................................................................ATATCACAGTGGCTGTTCTTTT............................................................................................2238.6726000260
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTAAA.........................................................................................2437.3322000220
...............................................................................................................................................................................................TGATTTTCTATATCACAGTGGC.....................................................................................................2217.00700070
............................................................................................................................................................................................................CACAGTGGCTGTTCTTTTT...........................................................................................1936.0018000180
........................................................................................................................................................................................................ATATCACAGTGGCTGTTCTTT.............................................................................................2134.6714000140
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTC............................................................................................2134.3313000130
......................................................................................................................................GGGAACTGTCGCTGCTGATATA..............................................................................................................................................................2214.00400040
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTCC.........................................................................................2433.6711000110
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTGA.........................................................................................2423.50700070
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTAA...........................................................................................2243.2513000130
.....................................................................................................................................AGGGAACTGTCGCTGCTGATATT..............................................................................................................................................................2313.00300030
..........................................................................................................................................................................................................ATCACAGTGGCTGTTCTTT.............................................................................................1932.67807010
.............................................................................................................................................................................................................ACAGTGGCTGTTCTTTTTA..........................................................................................1932.67800080
..........................................................................................................................................................................................................ATCACAGTGGCTGTTCTTTTTG..........................................................................................2222.50500050
.....................................................................................................................................AGGGAACTGTCGCTGCTGATATAT.............................................................................................................................................................2412.00200020
.....................................................................................................................................AGGGAACTGTCGCTGCTGATATC..............................................................................................................................................................2312.00200020
................................................................................................................AA-GTTTTTGT--TTAACCGC.....................................................................................................................................................................................1812.00200020
.........................................................................................................................................AACTGTCGCTGCTGATATA..............................................................................................................................................................1912.00200020
.....................................................................................................................................AGGGAACTGTCGCTGCTGA..................................................................................................................................................................1912.00200020
...........................................................................................................................................................................................................TCACAGTGGCTGTTCTTTT............................................................................................1932.00600060
............................................................................................................................................................................................................CACAGTGGCTGTTCTTTT............................................................................................1831.67500050
...........................................................................................................................................................................................................TCACAGTGGCTGTTCTTTTTAA.........................................................................................2231.33400040
........................................................................................................................................................................................................ATATCACAGTGGCTGTTCTT..............................................................................................2031.33400040
........................................................................................................................................................................................................ATATCACAGTGGCTGTTCTTTTT...........................................................................................2331.33402020
.....................................................................................................................................AGGGAACTGTCGCTGCTGATATG..............................................................................................................................................................2311.00100010
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTG............................................................................................2131.00300030
......................................................................................................................................GGGAACTGTCGCTGCTGAT.................................................................................................................................................................1911.00100010
..............................................................................................................................................................................................ATGATTTTCTATATCACAGTGGT.....................................................................................................2311.00100010
...............................................................................................................................................................................................TGATTTTCTATATCACAGTGGT.....................................................................................................2211.00100010
...........................................................................................................................................................................................................TCACAGTGGCTGTTCTTTTTG..........................................................................................2121.00200020
......................................................................................................................................GGGAACTGTCGCTGCTGATAT...............................................................................................................................................................2111.00101000
............................................................................................................................................................................................................CACAGTGGCTGTTCTTTTTGGT........................................................................................2211.00100010
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTAAC........................................................................................2531.00300030
....................................................................................................................................................................................................TTCTATATCACAGTGGCTGTTCT...............................................................................................2311.00100010
..........................................................................................................................................................................................................ATCACAGTGGCTGTTCTTTTTGG.........................................................................................2311.00100010
...........................................................................................................................................................................................................TCACAGTGGCTGTTCTTTTTGGT........................................................................................2311.00100010
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTAC.........................................................................................2431.00301020
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTGA..........................................................................................2330.67200020
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTC.............................................................................................2030.67200011
...........................................................................................................................................................................................................TCACAGTGGCTGTTCTTTTTA..........................................................................................2130.67200020
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTCC..........................................................................................2330.67200020
droVir3
TGA-----AAAT--TGAAT----AAA------------TAT--------------------------------------------------TTG-CTGAC--AAATTTCTTATG-TGCTATGT--TTAACCGCAGGGAACTGCTGCTGCTGATATACTGTATA--GATTA-TAT-------------------CGATTCCATATCACAGTGGCTGTTCTTTTTGGTTGCATCGCAATC-CACAACAATTTGTCAGCCGAAAGTACTTTTATTATTAACTAAC---TTGTGCA------ATTTGT---TCACTT-SizeHit CountTotal NormTotalM027

Male-body		M028

Head		M047

Female-body		M061

Embryo		SRR060654

Ovary		SRR060655

Testis		SRR060656

Ovary		SRR060657

Testis		SRR060658

Ovary		SRR060659

Testis		SRR060660

Ovary		SRR060661

Embryo		SRR060662

Embryo		SRR060663

Embryo		SRR060664

Male-body		SRR060665

Female-body		SRR060666

Male-body		SRR060667

Female-body		SRR060668

Male-body		SRR060669

Female-body		SRR060670

Testis		SRR060671

Male-body		SRR060672

Female-body		SRR060673

Ovary		SRR060674

Ovary		SRR060675

Ovary		SRR060676

Ovary		SRR060677

Ovary		SRR060678

Testis		SRR060679

Testis		SRR060680

Testis		SRR060681

Testis		SRR060682

Embryo		SRR060683

Testis		SRR060684

Embryo		SRR060685

Embryo		SRR060686

Embryo		SRR060687

Embryo		SRR060688

Ovary		SRR060689

Testis		SRR1106712

embryo_0-2h		SRR1106713

embryo_0-2h		SRR1106714

embryo_2-4h		SRR1106715

embryo_4-6h		SRR1106716

embryo_4-6h		SRR1106717

embryo_6-8h		SRR1106718

embryo_6-8h		SRR1106719

embryo_8-10h		SRR1106720

embryo_8-10h		SRR1106721

embryo_10-12h		SRR1106722

embryo_10-12h		SRR1106723

embryo_12-14h		SRR1106724

embryo_12-14h		SRR1106725

embryo_14-16h		SRR1106726

embryo_14-16h		SRR1106727

larvae		SRR1106728

larvae		SRR1106729

mixed whole adult body		SRR1106730

embryo_16-30h		V047

Embryo		V053

Head		V116

Male-body		GSM1528803

follicle cells		SRR2096013

Ovary_Strain_9_oxidized		SRR2096014

Ovary_Strain_160_oxidized		SRR2096026

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096038

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096050

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096055

Ovary_Min_43		SRR2096056

Ovary_Min_46		SRR2096057

Ovary_Min_50		SRR2096058

Ovary_Min_98		SRR2096059

Ovary_Min_164		SRR2096060

Ovary_Min_193		SRR2096061

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096072

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096079

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096080

embryo_0-2h from 15to16 day old nondysgenic mothers		SRR2096081

embryo_0-2h from 15to16 day old nondysgenic mothers
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTT...........................................................................................22334949.671048490030299170000000000000000000000000000000000001433193312825233385284224634757247948683020205523572021149061432062301156613991044884415060934242427422502272
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTT............................................................................................2135932.671779800754630000000000000000000000000000000000004141814512435630533860650910478455998076453301979104008216197622010020370688662600610
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTC..........................................................................................2333316.00994800132000000000000000000000000000000000000001271159533527618240242077764140150644411018770020102435340001012146562221
.....................................................................................................................................AGGGAACTGCTGCTGCTGATATA..............................................................................................................................................................2311766.00176600025000000011013000000000000000010580227318737200009261810000001000000300000022333100000002197510158101
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTCC.........................................................................................243570.00171000045100000000000000000000000000000000000001118204955194976180126759060000392000000625010000715453
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTT.............................................................................................203518.001554006361000000000000000000000000000000000000135111015161836316666384439000199000000273343000000369284137137
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTC...........................................................................................223494.671484000109600000000000000000000000000000000000000041101311918233616281800015100100046900010158906
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTG..........................................................................................232359.007180001670000000000000000000000000000000000000011511152472715352218151200039000000151398200000664232819
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTA..........................................................................................233179.3353800164000000000000000000000000000000000000001710221517251013134760002200000014191120000005435251824
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTCCC........................................................................................253126.6738000027000000000000000000000000000000000000000851212442949532731190009200000000500100110000
.....................................................................................................................................AGGGAACTGCTGCTGCTGATAT...............................................................................................................................................................22192.009200010000000000000000000000000000001112600000641112000001000000000001210000001251033
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTT..............................................................................................19350.33151001180000000000000000000000000000000000000002221356410994010170010001260000006822110
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTC............................................................................................21335.3310600098000000000000000000000000000000000000000000000001001000510000000000000000000
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTAA.........................................................................................24329.33880001000000000000000000000000000000000000000013244123102000000000052190000011413334
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTCC..........................................................................................23328.3385001440000000000000000000000000000000000000100011120362330001300000000000000021100
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTA...........................................................................................22326.0078000140000000000000000000000000000000000000001103120510120000000000421300000067924
............................................................................................................................................................CTGTATA--GATTA-TAT-------------------CGATTCCA.................................................................................................................23126.002600000000000000000000000000000000601514000000000000000000000000000000000000000000
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCT...............................................................................................18321.0063000500000000000000000000000000000000000000010000142112200020000001013000000102268
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTC.............................................................................................20317.005100050000000000000000000000000000000000000000000000010000000000000000000000000000
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTG...........................................................................................22316.334900080000000000000000000000000000000000000000220220100210006000000013000000210052
..........................................................................................................................................................................................................ATCACAGTGGCTGTTCTTTTT...........................................................................................21311.333400321000000000000000000000000000000000000000200001010100000200000000100000020000
...........................................................................................................................................................................................................TCACAGTGGCTGTTCTTTTTGG.........................................................................................22111.00110002000000000000000000000000000000000000000001011000001000000000000100000020110
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTGC.........................................................................................2429.501900018000000000000000000000000000000000000000000000000000000000000000100000000000
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTCA.........................................................................................2439.00270003000000000000000000000000000000000000000221112032020000500000000000000001110
........................................................................................................................................................................................................ATATCACAGTGGCTGTTCTTTTT...........................................................................................2337.67230010000000000000000000000000000000000000010031213121003010100000000100000000100
.............................................................................................................................................................................................................ACAGTGGCTGTTCTTTTT...........................................................................................1837.00210006000000000000000000000000000000000000000010000010010000010000011400000031010
...........................................................................................................................................................................................................TCACAGTGGCTGTTCTTTTTGGT........................................................................................2317.0070002000000000000000000000000000000000000000000000010000000000000001100000010100
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTGA.........................................................................................2426.50130002000000000000000000000000000000000000000000001000000000000000002400000003010
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTCCC.........................................................................................2436.00180008000000000000000000000000000000000000000000200011101000100000000000003000000
.....................................................................................................................................AGGGAACTGCTGCTGCTGATATAA.............................................................................................................................................................2416.0060000000000000000000000000000000020000100000000000000000000000000000000000001200
.........................................................................................................................................................................................................TATCACAGTGGCTGTTC................................................................................................1735.67170000000000000000000000000000000000000000000000000010001000000000002400000030222
..........................................................................................................................................................................................................ATCACAGTGGCTGTTCTTTTTG..........................................................................................2225.50110006000000000000000000000000000000000000000000010000000000000000000300000010000
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTAA..........................................................................................2335.33160002000000000000000000000000000000000000000001000010010000000000031100000102021
............................................................................................................CTTATG-TGCTATGT--TTAACCGC.....................................................................................................................................................................................2215.0050000000000000000000000000000000010010200000100000000000000000000000000000000000
...........................................................................................................................................................................................................TCACAGTGGCTGTTCTTTTT...........................................................................................2035.00150007000000000000000000000000000000000000000010100000000000000000000100000011102
.....................................................................................................................................AGGGAACTGCTGCTGCTGATA................................................................................................................................................................2115.0050000000000000000000000000000000000010100000000001000000000000000000100000000100
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTAAA.........................................................................................2434.00120000000000000000000000000000000000000000000000000000000000000000033000000110121
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTAC.........................................................................................2433.67110000000000000000000000000000000000000000000031100012001000200000000000000000000
.....................................................................................................................................AGGGAACTGCTGCTGCTGATATACTGTATG--.....................................................................................................................................................3013.0030000000000000000000000000000000000000000000120000000000000000000000000000000000
.....................................................................................................................................AGGGAACTGCTGCTGC.....................................................................................................................................................................1613.0030000000000000000000000000000000000000000000210000000000000000000000000000000000
.....................................................................................................................................AGGGAACTGCTGCTGCTGAT.................................................................................................................................................................2013.0030000000000000000000000000000000000000000000000010010000000000000000000000000100
..........................................................................................................................................................................................................ATCACAGTGGCTGTTCTTTT............................................................................................2033.0090005000000000000000000000000000000000000000010000000000000100000000000000001001
...........................................................................................................TCTTATG-TGCTATGT--TTAACCGC.....................................................................................................................................................................................2313.0030000000000000000000000000000000000000200001000000000000000000000000000000000000
..........................................................................................................TTCTTATG-TGCTATGT--TTAACCGC.....................................................................................................................................................................................2413.0030000000000000000000000000000000010011000000000000000000000000000000000000000000
.............................................................................................................TTATG-TGCTATGT--TTAACCGC.....................................................................................................................................................................................2113.0030000000000000000000000000000000000000200000100000000000000000000000000000000000
..........................................................................................................................................................................................................ATCACAGTGGCTGTTCTTTTTC..........................................................................................2233.0090008000000000000000000000000000000000000000000000000001000000000000000000000000
..........................................................................................................................................................................................................ATCACAGTGGCTGTTCTTTTTGG.........................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000010010
...........................................................................................................................................................................................................TCACAGTGGCTGTTCTTTTTGGC........................................................................................2312.0020001000000000000000000000000000000000000000000000000000000000000000000000000010
...................................................................................................................................GCAGGGAACTGCTGCTGCTGATA................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000001001
....................................................................................................................................CAGGGAACTGCTGCTGCTGATATA..............................................................................................................................................................2412.0020000000000000000000000000000000000000100000000000000000000000000000000000010000
.....................................................................................................................................AGGGAACTGCTGCTGCTGA..................................................................................................................................................................1912.0020000000000000000000000000000000000000000000010000000000000000000000100000000000
............................................................................................................................................................................................................CACAGTGGCTGTTCTTTTT...........................................................................................1932.0060013000000000000000000000000000000000000000100000000000000000000000000000000001
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTAC..........................................................................................2332.0060001000000000000000000000000000000000000000000100020010000100000000000000000000
.....................................................................................................................................AGGGAACTGCTGCTGCTGATATT..............................................................................................................................................................2312.0020000000000000000000000000000000010000000000001000000000000000000000000000000000
........................................................................................................................................................................................................ATATCACAGTGGCTGTTCTTTT............................................................................................2231.6750000000000000000000000000000000000000000000000010030000000000000000000000000010
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTACC........................................................................................2531.6750000000000000000000000000000000000000000000000000001100000300000000000000000000
...........................................................................................................................................................................................................TCACAGTGGCTGTTCTTTTTGC.........................................................................................2221.5030002000000000000000000000000000000000000000000000000001000000000000000000000000
...........................................................................................................................................................................................................TCACAGTGGCTGTTCTTTTTG..........................................................................................2121.5030001000000000000000000000000000000000000000000000000000000200000000000000000000
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTAC...........................................................................................2231.3340002000000000000000000000000000000000000000000001000000000000000000100000000000
droMoj3
CAA-----ATAT--AAAGT----GAAAC-------------ATGAGCACAG----TAT---------------------------------TCG-CAGAC--ATATATCCAGAGAGATTGCGT--TTAACCGCAGGGAACTGCTGCTGCTGATATACTATATG--TATT--TGT-------------CA----GTACTCTATATCACAGTGGCTGTTCTTTTTGGTTGCATCGCAAATAGCCAACAATTTGTC---T----------------------GTG---AAATAAATCTTGAATAGTG---TTATCT-SizeHit CountTotal NormTotalM046

Female-body		V041

Embryo		V049

Head		V056

Head		M060

Embryo		V110

Male-body
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTT...........................................................................................223175659.67526979301005269462
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTT............................................................................................21371420.67214262141002142425
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTC..........................................................................................2339565.33286966000286900
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTT.............................................................................................2035461.67163853000163802
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTC...........................................................................................2234979.00149371000149360
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTC............................................................................................2131153.673461000034610
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTCC.........................................................................................243749.332248000022480
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTG..........................................................................................232623.501247100012442
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTC.............................................................................................203612.001836000018360
..........................................................................................................................................................................................................ATCACAGTGGCTGTTCTTTTT...........................................................................................213393.671181200011790
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTT..............................................................................................193276.6783001008281
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTA..........................................................................................233230.3369100006910
...........................................................................................................................................................................................................TCACAGTGGCTGTTCTTTTTGG.........................................................................................221142.0014200001420
..........................................................................................................................................................................................................ATCACAGTGGCTGTTCTTTT............................................................................................203132.3339710003960
..........................................................................................................................................................................................................ATCACAGTGGCTGTTCTTTTTG..........................................................................................22295.5019100001910
...........................................................................................................................................................................................................TCACAGTGGCTGTTCTTTTT...........................................................................................20389.6726900002690
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTA...........................................................................................22389.6726900002690
..........................................................................................................................................................................................................ATCACAGTGGCTGTTCTTTTTGG.........................................................................................23186.00860000860
...........................................................................................................................................................................................................TCACAGTGGCTGTTCTTTTTGGT........................................................................................23180.00800000800
.....................................................................................................................................AGGGAACTGCTGCTGCTGATATA..............................................................................................................................................................23175.007501700580
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTCC..........................................................................................23368.6720600002060
............................................................................................................................................................................................................CACAGTGGCTGTTCTTTTT...........................................................................................19365.3319600001960
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTCCC........................................................................................25353.6716100001610
.............................................................................................................................................................................................................ACAGTGGCTGTTCTTTTT...........................................................................................18347.6714300001430
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTG............................................................................................21346.6714000001400
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTGG.........................................................................................24141.00410000410
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTGC.........................................................................................24234.50690000690
........................................................................................................................................................................................................ATATCACAGTGGCTGTTCTTT.............................................................................................21331.33940000940
...........................................................................................................................................................................................................TCACAGTGGCTGTTCTTTT............................................................................................19331.33940000940
...........................................................................................................................................................................................................TCACAGTGGCTGTTCTTTTTGGC........................................................................................23130.00300000300
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTG...........................................................................................22328.67860000860
............................................................................................................................................................................................................CACAGTGGCTGTTCTTTT............................................................................................18328.33850000850
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCT...............................................................................................18326.33790000790
...........................................................................................................................................................................................................TCACAGTGGCTGTTCTTTTTGGTT.......................................................................................24126.00260000260
..........................................................................................................................................................................................................ATCACAGTGGCTGTTCTTTTTC..........................................................................................22316.00480000480
.....................................................................................................................................AGGGAACTGCTGCTGCTGATAT...............................................................................................................................................................22115.00150401100
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTC..............................................................................................19314.67440000440
...........................................................................................................................................................................................................TCACAGTGGCTGTTCTTTTTGGTC.......................................................................................24112.00120000120
..........................................................................................................................................................................................................ATCACAGTGGCTGTTCTTT.............................................................................................19311.00330000330
...........................................................................................................................................................................................................TCACAGTGGCTGTTCTTTTTG..........................................................................................21210.50210000210
........................................................................................................................................................................................................ATATCACAGTGGCTGTTCTTTT............................................................................................22310.00300000300
............................................................................................................................................................................................................CACAGTGGCTGTTCTTTTTC..........................................................................................2039.33280000280
...........................................................................................................................................................................................................TCACAGTGGCTGTTCTTTTTGC.........................................................................................2229.00180000180
.....................................................................................................................................AGGGAACTGCTGCTGCTGATA................................................................................................................................................................2118.008010070
..........................................................................................................................................................................................................ATCACAGTGGCTGTTCTTTTC...........................................................................................2137.33220000220
droGri2
AGT-----AAT----G--T----TAT-----------CA-A--------------------------------------------------CCGCTGCAT--AAATTC-ACCAA-TGCTATGT--TTAACCACAGGGAACTGCTGCTGCTGATATACAACCAT-----ATTTA--------------TA----CACGACTATATCACAGTGGCTGTTCTTTTTGGTTGCATCGCCATT-TGCAACGATTTGTCAGTG----------------------TT----TTATTCT----ATTTTATT---TTATGT-SizeHit CountTotal NormTotalM041

Female-body		V109

Male-body
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTT...........................................................................................2262.5015105
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTT............................................................................................2161.831129
.........................................................................................................................................................................................................TATCACAGTGGCTGTTCTTT.............................................................................................2060.33202

Generated: 10/20/2015 at 07:43 PM