ID:

dan-mir-6-1

 Coordinate:

scaffold_13266:9731820-9731887 +

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

intergenic

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-33.7

Flybase annnotation

pre_miRNA [Dana\mir-6-1-RM]; miRNA [Dana\miR-6-1-RA]

No Repeatable elements found

mature

  1. dan-mir-6-1  scaffold_13266:9731862-9731883 +
  2. dan-mir-6-2  scaffold_13266:9732020-9732041 +
  3. dan-mir-6-3  scaffold_13266:9732170-9732191 +
star

Sense Strand Reads

CATCAAAAATAACGAGTTAGGTGACAGGACTCGCAGGATACCCGCCTTTAAAGTAGAGAGAATAGTGGCTGTGCTGTAAGTTTCAAAATCTATATCACAGTGGCTGTTCTTTTTGCACCTAAAGTGCCAAACAGCCAAACCCGAGAATGTTCTGTGATTTTTCGTTAT

*****************************************..(((((((..((((((((((((((.((((((.((((.(((....))).)))).)))))).))))))))))))))...))))).))..*************************************** 		Read size # Mismatch Hit Count Total Norm Total M058

embryo

 M044

female body

 V039

embryo

 V106

head

 V105

male body		 V055

head
............................................................................................TATCACAGTGGCTGTTCTTTTT...................................................... 22 0 3 15043.33 45130 44752 367 0 4 7 0
............................................................................................TATCACAGTGGCTGTTCTTTT....................................................... 21 0 3 3049.33 9148 9039 97 2 8 2 0
............................................................................................TATTACAGTGGCTGTTCTTTTT...................................................... 22 1 3 667.33 2002 2002 0 0 0 0 0
............................................................................................TGTCACAGTGGCTGTTCTTTTT...................................................... 22 1 3 493.00 1479 1479 0 0 0 0 0
............................................................................................TATCACAGTGGCTGTTCTTTTC...................................................... 22 1 3 462.00 1386 1386 0 0 0 0 0
............................................................................................TACCACAGTGGCTGTTCTTTTT...................................................... 22 1 3 369.00 1107 1107 0 0 0 0 0
............................................................................................TATCACAGTGGCTGTTCTTT........................................................ 20 0 3 276.00 828 792 26 0 2 8 0
............................................................................................TATTACAGTGGCTGTTCTTTT....................................................... 21 1 3 133.67 401 401 0 0 0 0 0
............................................................................................TTTCACAGTGGCTGTTCTTTTT...................................................... 22 1 3 123.33 370 370 0 0 0 0 0
............................................................................................TGTCACAGTGGCTGTTCTTTT....................................................... 21 1 3 101.00 303 303 0 0 0 0 0
............................................................................................TACCACAGTGGCTGTTCTTTT....................................................... 21 1 3 76.67 230 230 0 0 0 0 0
........................................................AGAGAATAGTGGCTGTGCTGTA.......................................................................................... 22 0 1 72.00 72 72 0 0 0 0 0
............................................................................................TATCACAGTGGCTGTTCTTTC....................................................... 21 1 3 57.67 173 172 0 0 1 0 0
............................................................................................GATCACAGTGGCTGTTCTTTTT...................................................... 22 1 3 57.33 172 171 1 0 0 0 0
............................................................................................CATCACAGTGGCTGTTCTTTTT...................................................... 22 1 3 49.00 147 146 1 0 0 0 0
............................................................................................TATCACAGCGGCTGTTCTTTTT...................................................... 22 1 3 40.00 120 117 3 0 0 0 0
............................................................................................TATCACAGTGGCTGTTCTTC........................................................ 20 1 3 37.00 111 111 0 0 0 0 0
.............................................................................................ATCACAGTGGCTGTTCTTTTT...................................................... 21 0 3 35.67 107 67 40 0 0 0 0
............................................................................................TATCACAGTGGCTGTTCTTTTTC..................................................... 23 1 3 34.67 104 104 0 0 0 0 0
............................................................................................AATCACAGTGGCTGTTCTTTTT...................................................... 22 1 3 34.33 103 102 1 0 0 0 0
............................................................................................TATCACAGTGGCTGTTCTTTTTA..................................................... 23 1 3 33.67 101 98 3 0 0 0 0
............................................................................................TATCTCAGTGGCTGTTCTTTTT...................................................... 22 1 3 32.67 98 98 0 0 0 0 0
............................................................................................TATCACAGTGGCTGCTCTTTTT...................................................... 22 1 3 32.00 96 95 1 0 0 0 0
...........................................................................................CTATCACAGTGGCTGTTCTTTTT...................................................... 23 1 3 26.00 78 78 0 0 0 0 0
............................................................................................TATCACAGTGGATGTTCTTTTT...................................................... 22 1 3 24.00 72 72 0 0 0 0 0
............................................................................................TGTTACAGTGGCTGTTCTTTTT...................................................... 22 2 3 23.67 71 71 0 0 0 0 0
............................................................................................TTTCACAGTGGCTGTTCTTTT....................................................... 21 1 3 22.33 67 67 0 0 0 0 0
............................................................................................TGTCACAGTGGCTGTTCTTTTC...................................................... 22 2 3 17.67 53 53 0 0 0 0 0
............................................................................................TATCAGAGTGGCTGTTCTTTTT...................................................... 22 1 3 17.33 52 52 0 0 0 0 0
............................................................................................TATCACAGTGGCTGTTCTT......................................................... 19 0 3 17.33 52 39 8 0 3 2 0
........................................................ATAGAATAGTGGCTGTGCTGTA.......................................................................................... 22 1 1 16.00 16 16 0 0 0 0 0
............................................................................................TATCACAGTGGCTGATCTTTTT...................................................... 22 1 3 14.67 44 44 0 0 0 0 0
............................................................................................TATTACAGTGGCTGTTCTTTTC...................................................... 22 2 3 14.67 44 44 0 0 0 0 0
............................................................................................TATCACAGTGGCTGTTCCTTTT...................................................... 22 1 3 14.33 43 43 0 0 0 0 0
............................................................................................TATCACAGTGGCTGTCCTTTTT...................................................... 22 1 3 14.33 43 42 1 0 0 0 0
........................................................AGAGAATAGTTGCTGTGCTATA.......................................................................................... 22 2 1 14.00 14 5 0 9 0 0 0
............................................................................................TATCACAGTGGCTGTTCTTTTTG..................................................... 23 0 2 14.00 28 24 2 0 1 1 0
............................................................................................TATCACAGTGGCTTTTCTTTTT...................................................... 22 1 3 12.67 38 38 0 0 0 0 0
..............................................................................................TCACAGTGGCTGTTCTTTTTGC.................................................... 22 0 1 12.00 12 12 0 0 0 0 0
............................................................................................TATCACAGTGGCTGTTCTTTGT...................................................... 22 1 3 11.33 34 34 0 0 0 0 0
............................................................................................TATCATAGTGGCTGTTCTTTTT...................................................... 22 1 3 11.00 33 32 1 0 0 0 0
............................................................................................TATCACAGTGGCTGTTTTTTTT...................................................... 22 1 3 10.67 32 30 0 2 0 0 0
............................................................................................GATCACAGTGGCTGTTCTTTT....................................................... 21 1 3 10.67 32 32 0 0 0 0 0
............................................................................................TATCACAGTGGCTGTGCTTTTT...................................................... 22 1 3 10.67 32 32 0 0 0 0 0
............................................................................................TATTACAGTGGCTGTTCTTT........................................................ 20 1 3 10.33 31 31 0 0 0 0 0
............................................................................................TATCACAGTGGCTGTTCTTCTT...................................................... 22 1 3 10.33 31 31 0 0 0 0 0
............................................................................................TATCACAGGGGCTGTTCTTTTT...................................................... 22 1 3 10.00 30 11 18 1 0 0 0
............................................................................................TATCACAGTGGCCGTTCTTTTT...................................................... 22 1 3 9.67 29 28 0 0 1 0 0
............................................................................................TATCGCAGTGGCTGTTCTTTTT...................................................... 22 1 3 9.33 28 28 0 0 0 0 0
............................................................................................TACTACAGTGGCTGTTCTTTTT...................................................... 22 2 3 9.33 28 28 0 0 0 0 0
............................................................................................TATCACGGTGGCTGTTCTTTTT...................................................... 22 1 3 9.33 28 27 0 1 0 0 0
............................................................................................TATCACAGTGACTGTTCTTTTT...................................................... 22 1 3 9.33 28 26 0 2 0 0 0
............................................................................................TACCACAGTGGCTGTTCTTTTC...................................................... 22 2 3 9.33 28 28 0 0 0 0 0
............................................................................................TATCACAGTTGCTGTTCTTTTT...................................................... 22 1 3 9.00 27 26 0 0 1 0 0
...............................................................................................CACAGTGGCTGTTCTTTTT...................................................... 19 0 3 8.67 26 26 0 0 0 0 0
..............................................................................................TCACAGTGGCTGTTCTTTTT...................................................... 20 0 3 8.00 24 19 5 0 0 0 0
............................................................................................TATCTCAGTGGCTGTTCTTTT....................................................... 21 1 3 7.67 23 23 0 0 0 0 0
............................................................................................TATCACAGCGGCTGTTCTTTT....................................................... 21 1 3 7.33 22 19 3 0 0 0 0
............................................................................................TATCACAGAGGCTGTTCTTTTT...................................................... 22 1 3 7.00 21 15 6 0 0 0 0
............................................................................................TGTCACAGTGGCTGTTCTTT........................................................ 20 1 3 7.00 21 21 0 0 0 0 0
........................................................AGAGAATAGTGGCTGTGCTGT........................................................................................... 21 0 1 7.00 7 7 0 0 0 0 0
............................................................................................TATCACAGTGGTTGTTCTTTTT...................................................... 22 1 3 6.67 20 20 0 0 0 0 0
............................................................................................TATCACAGTGGCTGTTGTTTTT...................................................... 22 1 3 6.67 20 19 0 1 0 0 0
............................................................................................TATCACAGTGGCTGGTCTTTTT...................................................... 22 1 3 6.67 20 17 0 1 1 1 0
............................................................................................CATCACAGTGGCTGTTCTTTT....................................................... 21 1 3 6.67 20 20 0 0 0 0 0
............................................................................................TATCACAGTCGCTGTTCTTTTT...................................................... 22 1 3 6.33 19 19 0 0 0 0 0
............................................................................................AATCACAGTGGCTGTTCTTTT....................................................... 21 1 3 6.33 19 19 0 0 0 0 0
............................................................................................TATCACAGTGGCTGTTCT.......................................................... 18 0 3 6.00 18 18 0 0 0 0 0
.............................................................................................ATCACAGTGGCTGTTCTTTT....................................................... 20 0 3 6.00 18 11 7 0 0 0 0
................................................................................................ACAGTGGCTGTTCTTTTT...................................................... 18 0 3 6.00 18 18 0 0 0 0 0
............................................................................................TATCACATTGGCTGTTCTTTTT...................................................... 22 1 3 5.67 17 17 0 0 0 0 0
............................................................................................TACCACAGTGGCTGTTCTTT........................................................ 20 1 3 5.67 17 17 0 0 0 0 0
............................................................................................TATCACAGTAGCTGTTCTTTTT...................................................... 22 1 3 5.67 17 15 0 2 0 0 0
............................................................................................TATCACACTGGCTGTTCTTTTT...................................................... 22 1 3 5.67 17 17 0 0 0 0 0
............................................................................................TATCACAGTGGCTGCTCTTTT....................................................... 21 1 3 5.33 16 16 0 0 0 0 0
............................................................................................TATCACAGTGGCTGTTCTTTTA...................................................... 22 1 3 5.33 16 15 0 0 1 0 0
............................................................................................TATCACAATGGCTGTTCTTTTT...................................................... 22 1 3 5.33 16 16 0 0 0 0 0
...........................................................................................CTATCACAGTGGCTGTTCTTTT....................................................... 22 1 3 5.33 16 15 1 0 0 0 0
............................................................................................TATCACAGTGGCTGTTCTTTTTGC.................................................... 24 0 1 5.00 5 5 0 0 0 0 0
............................................................................................TATCACAGTGGCTGTTCTCTTT...................................................... 22 1 3 5.00 15 15 0 0 0 0 0
............................................................................................TTTCACAGTGGCTGTTCTTTTC...................................................... 22 2 3 5.00 15 15 0 0 0 0 0
............................................................................................TATCACAGTGGCTGTTCTTGTT...................................................... 22 1 3 4.67 14 13 0 1 0 0 0
...........................................................................................CGATCACAGTGGCTGTTCTTTTT...................................................... 23 2 3 4.67 14 14 0 0 0 0 0
............................................................................................TATCACAGTGGCTGTTCTTTG....................................................... 21 1 3 4.33 13 13 0 0 0 0 0
............................................................................................TATCACAGTGGGTGTTCTTTTT...................................................... 22 1 3 4.33 13 13 0 0 0 0 0
............................................................................................TATTACAGTGGCTGCTCTTTTT...................................................... 22 2 3 4.33 13 13 0 0 0 0 0
............................................................................................TATCACAGTGGCTTTTCTTTT....................................................... 21 1 3 4.33 13 13 0 0 0 0 0
............................................................................................TATCACAGTGGCTATTCTTTTT...................................................... 22 1 3 4.33 13 13 0 0 0 0 0
............................................................................................TATCACAGTGGCTGATCTTTT....................................................... 21 1 3 4.00 12 12 0 0 0 0 0
............................................................................................TATCACAGTGCCTGTTCTTTTT...................................................... 22 1 3 4.00 12 11 0 1 0 0 0
........................................................ATAGAATAGTGGCTGTGCTGC........................................................................................... 21 2 1 4.00 4 4 0 0 0 0 0
............................................................................................TATCACAGTGGCTTTCTTTTT....................................................... 21 3 12 4.00 48 45 3 0 0 0 0
............................................................................................TTTCACAGTGGCTGTTCTTT........................................................ 20 1 3 4.00 12 12 0 0 0 0 0
............................................................................................TATCACAGTGGCTGTCCTTTT....................................................... 21 1 3 3.67 11 10 0 1 0 0 0
............................................................................................TGTCACAGTGGCTGTTCTTTC....................................................... 21 2 3 3.67 11 11 0 0 0 0 0
............................................................................................TAACACAGTGGCTGTTCTTTTT...................................................... 22 1 3 3.67 11 11 0 0 0 0 0
............................................................................................TATCACAGTGGCTGTACTTTTT...................................................... 22 1 3 3.67 11 11 0 0 0 0 0
............................................................................................TATCACAGTGGATGTTCTTTT....................................................... 21 1 3 3.33 10 10 0 0 0 0 0
............................................................................................TGTTACAGTGGCTGTTCTTTT....................................................... 21 2 3 3.33 10 10 0 0 0 0 0
............................................................................................TATCACAGTGGCTGTTCTTTTG...................................................... 22 1 3 3.33 10 9 1 0 0 0 0
.............................................................................................AGCACAGTGGCTGTTCTTTTT...................................................... 21 1 3 3.33 10 10 0 0 0 0 0
............................................................................................TACCACAGCGGCTGTTCTTTTT...................................................... 22 2 3 3.00 9 9 0 0 0 0 0
............................................................................................TATCACAGTGGCTGTTCTTTTTAA.................................................... 24 2 3 3.00 9 7 1 0 0 1 0
............................................................................................TATCACAGTGGCTGTTATTTTT...................................................... 22 1 3 3.00 9 9 0 0 0 0 0
........................................................ATAGAATAGTGGCTGTGCTGT........................................................................................... 21 1 1 3.00 3 3 0 0 0 0 0
........................................................AGAGAATAGTGGCTGTGCTGC........................................................................................... 21 1 1 3.00 3 3 0 0 0 0 0
............................................................................................TATCACAGTGTCTGTTCTTTTT...................................................... 22 1 3 2.67 8 8 0 0 0 0 0
..........................................................................................TCTATCACAGTGGCTGTTCTTTTT...................................................... 24 1 3 2.67 8 8 0 0 0 0 0
............................................................................................TATCACAGAGGCTGTTCTTTT....................................................... 21 1 3 2.67 8 6 2 0 0 0 0
............................................................................................TATTACAGCGGCTGTTCTTTTT...................................................... 22 2 3 2.67 8 8 0 0 0 0 0
............................................................................................TATCACAGTGGCTGTTCGTTTT...................................................... 22 1 3 2.67 8 8 0 0 0 0 0
............................................................................................TATCAGAGTGGCTGTTCTTTT....................................................... 21 1 3 2.67 8 8 0 0 0 0 0
............................................................................................TATTTCAGTGGCTGTTCTTTTT...................................................... 22 2 3 2.67 8 8 0 0 0 0 0
............................................................................................TATCACAGTGGCTGTTCTTTTTGT.................................................... 24 1 2 2.50 5 5 0 0 0 0 0
............................................................................................TATCACAGTGGCTGTTTTTTT....................................................... 21 1 3 2.33 7 7 0 0 0 0 0
............................................................................................TATTACAGTGGCTGTTCTTC........................................................ 20 2 3 2.33 7 7 0 0 0 0 0
............................................................................................TATCACAGTGGCTGTTCTGTTT...................................................... 22 1 3 2.33 7 7 0 0 0 0 0
............................................................................................TATCACAGTGGCTGTGCTTTT....................................................... 21 1 3 2.33 7 6 0 0 0 1 0
............................................................................................TACCACAGTGGCTGTTCTTTC....................................................... 21 2 3 2.33 7 7 0 0 0 0 0
............................................................................................TATCACAGGGGCTGTTCTTTT....................................................... 21 1 3 2.33 7 1 6 0 0 0 0
............................................................................................TACCACAGTGGCTGTTCTTC........................................................ 20 2 3 2.33 7 7 0 0 0 0 0
............................................................................................TATCACAGTGGCTGTTCTTATT...................................................... 22 1 3 2.33 7 7 0 0 0 0 0
............................................................................................TATCACAGTTGCTGTTCTTTT....................................................... 21 1 3 2.33 7 7 0 0 0 0 0
............................................................................................TATCACAGTGGCTGGTCTTTT....................................................... 21 1 3 2.33 7 5 0 0 2 0 0
............................................................................................TTTTACAGTGGCTGTTCTTTTT...................................................... 22 2 4 2.25 9 9 0 0 0 0 0
............................................................................................TATCACAGTGGTTGTTCTTTT....................................................... 21 1 3 2.00 6 6 0 0 0 0 0
............................................................................................TATCATAGTGGCTGTTCTTTT....................................................... 21 1 3 2.00 6 6 0 0 0 0 0
............................................................................................TATCACAGTGGCTGTTCCTTT....................................................... 21 1 3 2.00 6 6 0 0 0 0 0
............................................................................................TATCACAGTGACTGTTCTTTT....................................................... 21 1 3 2.00 6 6 0 0 0 0 0
.........................................................GAGAATAGTGGCTGTGCTGTA.......................................................................................... 21 0 1 2.00 2 1 1 0 0 0 0
.............................................................................................ATCACAGTGGCTGTTCTTT........................................................ 19 0 3 2.00 6 3 3 0 0 0 0
............................................................................................TGTCACAGTGGCTGTTCTTTTTA..................................................... 23 2 3 1.67 5 5 0 0 0 0 0
............................................................................................TGTCACAGTGGCTGTTCTTC........................................................ 20 2 3 1.67 5 5 0 0 0 0 0
............................................................................................TGTCACAGCGGCTGTTCTTTTT...................................................... 22 2 3 1.67 5 5 0 0 0 0 0
............................................................................................TATCACAGTGCCTGTTCTTTT....................................................... 21 1 3 1.67 5 5 0 0 0 0 0
........................................................................................GATCTATCACAGTGGCTGTTCTTTTT...................................................... 26 3 3 1.67 5 5 0 0 0 0 0
............................................................................................TGTCACAGTGGATGTTCTTTTT...................................................... 22 2 3 1.67 5 5 0 0 0 0 0
............................................................................................TATCACAGCGGCTGTTCTTTTC...................................................... 22 2 3 1.67 5 5 0 0 0 0 0
..............................................................................................TCACAGTGGCTGTTCTTTT....................................................... 19 0 3 1.67 5 5 0 0 0 0 0
..............................................................................................TATCAGTGGCTGTTCTTTTT...................................................... 20 2 3 1.67 5 5 0 0 0 0 0
...........................................................................................CGATCACAGTGGCTGTTCTTTT....................................................... 22 2 3 1.67 5 5 0 0 0 0 0
..........................................................................................TCTATCACAGTGGCTGTTCTTTT....................................................... 23 1 3 1.67 5 5 0 0 0 0 0
...........................................................................................ATATCACAGTGGCTGTTCTTTT....................................................... 22 0 3 1.67 5 5 0 0 0 0 0
............................................................................................TATTACAGTGGCTGTTCTTTTTA..................................................... 23 2 3 1.67 5 5 0 0 0 0 0
............................................................................................TATCACAGTGGCTCTTCTTTTT...................................................... 22 1 3 1.67 5 5 0 0 0 0 0
............................................................................................TATCACAGTGGCTGTTCATTTT...................................................... 22 1 3 1.67 5 5 0 0 0 0 0
............................................................................................TATTACAGTGGCTGTCCTTTTT...................................................... 22 2 3 1.33 4 4 0 0 0 0 0
............................................................................................AATCACAGTGGCTGTTCTTTTC...................................................... 22 2 3 1.33 4 4 0 0 0 0 0
.............................................................................................ATAACAGTGGCTGTTCTTTTT...................................................... 21 1 3 1.33 4 4 0 0 0 0 0
............................................................................................TATCACAGTGGCTGTTCTTCT....................................................... 21 1 3 1.33 4 4 0 0 0 0 0
............................................................................................TATCACAGTGGCAGTTCTTTTT...................................................... 22 1 3 1.33 4 4 0 0 0 0 0
............................................................................................TATCACAGTGGCTGGTCTTT........................................................ 20 1 3 1.33 4 1 0 2 0 1 0
............................................................................................TATCACGGTGGCTGTTCTTTT....................................................... 21 1 3 1.33 4 4 0 0 0 0 0
............................................................................................TCTCACAGTGGCTGTTCTTTTT...................................................... 22 1 3 1.33 4 4 0 0 0 0 0
............................................................................................TATCACACTGGCTGTTCTTTT....................................................... 21 1 3 1.33 4 4 0 0 0 0 0
............................................................................................TATCACAGTGGCTGTTCTCTT....................................................... 21 1 3 1.33 4 4 0 0 0 0 0
............................................................................................TATGACAGTGGCTGTTCTTTTT...................................................... 22 1 3 1.33 4 4 0 0 0 0 0
............................................................................................TATTACAGTGGCTGTTTTTTTT...................................................... 22 2 3 1.00 3 3 0 0 0 0 0
............................................................................................TATCACAGTGGCTGTTCTTTTGGC.................................................... 24 1 1 1.00 1 1 0 0 0 0 0
........................................................AAAGAATCGTGGCTGTGCTGTA.......................................................................................... 22 2 1 1.00 1 1 0 0 0 0 0
............................................................................................TATCACAGTCGCTGTTCTTTTC...................................................... 22 2 3 1.00 3 3 0 0 0 0 0
........................................................AGAGAATAGTGGCTGTGCTG............................................................................................ 20 0 1 1.00 1 1 0 0 0 0 0
............................................................................................TGCCACAGTGGCTGTTCTTTTT...................................................... 22 2 3 1.00 3 3 0 0 0 0 0
............................................................................................TATCACAGTGGCTGTTCTTTTTAC.................................................... 24 1 1 1.00 1 1 0 0 0 0 0
............................................................................................TATCACAGTGGCTGTTCTTGT....................................................... 21 1 3 1.00 3 3 0 0 0 0 0
........................................................TTAGAATAGTGGCTGTGCTGTA.......................................................................................... 22 2 1 1.00 1 1 0 0 0 0 0
........................................................AGAGAATAGTGGCTGAGCTGTA.......................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0
........................................................AGAGAATAGTTGCTGTGCTCTA.......................................................................................... 22 2 1 1.00 1 0 0 1 0 0 0
..............................................................................................TTACAGTGGCTGTTCTTTTTGCA................................................... 23 1 1 1.00 1 1 0 0 0 0 0
............................................................................................TACTACAGTGGCTGTTCTTTT....................................................... 21 2 3 1.00 3 3 0 0 0 0 0
............................................................................................TATCACAGTGGCTGTTCTTTTTCC.................................................... 24 1 1 1.00 1 1 0 0 0 0 0
...............................................TTAAAGTAGAGAGAATAGTGGCT.................................................................................................. 23 0 1 1.00 1 1 0 0 0 0 0
............................................................................................TATCTCAGTGGCTGTTCTTT........................................................ 20 1 3 1.00 3 3 0 0 0 0 0
............................................................................................GATCACAGTGGCTGTTCTTTTTCC.................................................... 24 2 1 1.00 1 1 0 0 0 0 0
............................................................................................TATCACAGTTGCTGTTCTTT........................................................ 20 1 3 1.00 3 2 1 0 0 0 0
............................................................................................TATCACAGCGGCTGTTCTTT........................................................ 20 1 3 1.00 3 2 1 0 0 0 0
............................................................................................TATCAGAGTGGCTGTTCTTT........................................................ 20 1 3 1.00 3 3 0 0 0 0 0
............................................................................................TAACACAGTGGCTGTTCTTTT....................................................... 21 1 3 1.00 3 3 0 0 0 0 0
........................................................AGAGAATAGTGGCTGGGGTGTC.......................................................................................... 22 3 1 1.00 1 0 0 1 0 0 0
............................................................................................TATCACAGTGGCTGTTCTTTTTAAA................................................... 25 2 1 1.00 1 1 0 0 0 0 0
........................................................AGAGAATAGTGGCTGTGCTGGA.......................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0
............................................................................................TATCACAGTGGCTGTTCTC......................................................... 19 1 3 1.00 3 3 0 0 0 0 0
............................................................................................TTTCACAGTGGCTGTTCTTTTTGC.................................................... 24 1 1 1.00 1 1 0 0 0 0 0
............................................................................................CATCACAGTGGCTGTTCTTTTC...................................................... 22 2 3 1.00 3 3 0 0 0 0 0
............................................................................................TATCACAGTAGCTGTTCTTTT....................................................... 21 1 3 1.00 3 3 0 0 0 0 0
........................................................TGAGAATAGTGGCTGTGCTGTA.......................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0
............................................................................................TATCACAGTCGCTGTTCTTTT....................................................... 21 1 3 1.00 3 3 0 0 0 0 0
............................................................................................TATCACAGTGGATGTTCTTTTC...................................................... 22 2 3 1.00 3 3 0 0 0 0 0
............................................................................................TATCACAGTGGGTGTTCTTTT....................................................... 21 1 3 1.00 3 3 0 0 0 0 0
........................................................AGAGAATAGTTGCTGTGCTAT........................................................................................... 21 2 2 1.00 2 2 0 0 0 0 0
........................................................AGAGAATAGTGGCTGTGCT............................................................................................. 19 0 1 1.00 1 1 0 0 0 0 0
.............................................................................................AGCACAGTGGCTGTTCTTTT....................................................... 20 1 3 1.00 3 3 0 0 0 0 0
........................................................AGATAATAGTGGCTGTGCTGC........................................................................................... 21 2 1 1.00 1 1 0 0 0 0 0
............................................................................................TAGCACAGTGGCTGTTCTTTTT...................................................... 22 1 3 1.00 3 3 0 0 0 0 0
........................................................ATAGAATAGTGGCTGTGCTG............................................................................................ 20 1 1 1.00 1 1 0 0 0 0 0
.......................................................GAGGGAATTGTGGCTGTGCTC............................................................................................ 21 3 1 1.00 1 0 0 0 0 0 1
............................................................................................TATCACAGTGGCTGTTGTTTT....................................................... 21 1 3 1.00 3 3 0 0 0 0 0
............................................................................................TATCACAGTGGCTATTCTTTT....................................................... 21 1 3 1.00 3 3 0 0 0 0 0
.........................................................................................ATCTATCACAGTGGCTGTTCTTTTT...................................................... 25 2 3 1.00 3 3 0 0 0 0 0
.............................................................................................ATCACAGTGGCTGTTCTTTTC...................................................... 21 1 3 1.00 3 3 0 0 0 0 0
............................................................................................TATCACAGTGGATGTTCTTT........................................................ 20 1 3 1.00 3 2 0 0 0 1 0
............................................................................................TACCACAGTGGCTGTTCTTTTTGC.................................................... 24 1 1 1.00 1 1 0 0 0 0 0
........................................................ATAGAATAGTGGCTGTGCT............................................................................................. 19 1 1 1.00 1 1 0 0 0 0 0
............................................................................................TGTCACAGTGGCTGTTCTTTTA...................................................... 22 2 3 1.00 3 3 0 0 0 0 0
............................................................................................TACCACACTGGCTGTTCTTTTT...................................................... 22 2 3 1.00 3 3 0 0 0 0 0
............................................................................................TGTCACAGTGGCTGTTCTTTTTC..................................................... 23 2 3 1.00 3 3 0 0 0 0 0
........................................................AGAGAATAGTGGCTGTGCTGTC.......................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0
............................................................................................TATCACAGTGGCTGTTCTTTTTTC.................................................... 24 1 2 1.00 2 2 0 0 0 0 0
........................................................AGAGATTAGTGGCTGTGCTGTA.......................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0
............................................................................................GATCACAGTGGCTGTTCTTTTC...................................................... 22 2 3 1.00 3 3 0 0 0 0 0
............................................................................................TATCACAGTGGCTGCTCTTTTC...................................................... 22 2 3 1.00 3 3 0 0 0 0 0
............................................................................................TATTACAGCGGCTGTTCTTTT....................................................... 21 2 3 1.00 3 3 0 0 0 0 0
.........................................................GGGTATAGTGGCTGTGCTGTA.......................................................................................... 21 2 1 1.00 1 1 0 0 0 0 0
............................................................................................TATCACAGTGGCTGTTCTTTTGGCAC.................................................. 26 1 1 1.00 1 1 0 0 0 0 0
............................................................................................TATCACAGTGGCTGTTCTATTT...................................................... 22 1 3 1.00 3 3 0 0 0 0 0
............................................................................................TTTTACAGTGGCTGTTCTTTT....................................................... 21 2 4 0.75 3 3 0 0 0 0 0
............................................................................................TATCACAGTGGATGTTCTTGT....................................................... 21 2 4 0.75 3 3 0 0 0 0 0
............................................................................................TATTACAGTGGCTGTTCTTTC....................................................... 21 2 4 0.75 3 3 0 0 0 0 0
............................................................................................TATCACAGTGGCTGGTGTTTTT...................................................... 22 2 3 0.67 2 0 0 2 0 0 0
............................................................................................TATCACAGTGGCTGTTCTTAT....................................................... 21 1 3 0.67 2 2 0 0 0 0 0
............................................................................................TATTACAGTGGCTTTTCTTTTT...................................................... 22 2 3 0.67 2 2 0 0 0 0 0
............................................................................................TATCACAGTGGCTGCTCTTT........................................................ 20 1 3 0.67 2 2 0 0 0 0 0
............................................................................................TATTACAGTGGCTGTTCGTTTT...................................................... 22 2 3 0.67 2 2 0 0 0 0 0
............................................................................................TACCACAGTGACTGTTCTTTTT...................................................... 22 2 3 0.67 2 2 0 0 0 0 0
............................................................................................CATCACAGTGGCTGTTCTTT........................................................ 20 1 3 0.67 2 2 0 0 0 0 0
............................................................................................TATCACAGTGGCTGTTCTTTTAA..................................................... 23 2 3 0.67 2 2 0 0 0 0 0
............................................................................................TATCGCAGTGGCTGTTCTTTTC...................................................... 22 2 3 0.67 2 2 0 0 0 0 0
............................................................................................TATCACAGTGGCTGTTCGTTT....................................................... 21 1 3 0.67 2 2 0 0 0 0 0
............................................................................................TATCACAGTGGCCGTTCTTTT....................................................... 21 1 3 0.67 2 2 0 0 0 0 0
............................................................................................TATTACAGTGGATGTTCTTTTT...................................................... 22 2 3 0.67 2 2 0 0 0 0 0
............................................................................................TATCACAGTTGCTGTTCTTTTC...................................................... 22 2 3 0.67 2 2 0 0 0 0 0
............................................................................................TATCGCAGTGGCTGTTCTTTT....................................................... 21 1 3 0.67 2 2 0 0 0 0 0
...........................................................................................ATATCACAGTGGCTGTTCTTT........................................................ 21 0 3 0.67 2 2 0 0 0 0 0
............................................................................................TATCACAGTGGCTGTTCCTTTC...................................................... 22 2 3 0.67 2 2 0 0 0 0 0
............................................................................................TATCACAGTGGCTGTTCTTTAC...................................................... 22 2 3 0.67 2 2 0 0 0 0 0
............................................................................................TATTACGGTGGCTGTTCTTTTT...................................................... 22 2 3 0.67 2 2 0 0 0 0 0
............................................................................................TGTCACAGTGGCTGCTCTTTTT...................................................... 22 2 3 0.67 2 2 0 0 0 0 0
............................................................................................TACCACAGTGGCTGCTCTTTT....................................................... 21 2 3 0.67 2 2 0 0 0 0 0
............................................................................................TATCACATTGGCTGTTCTTTT....................................................... 21 1 3 0.67 2 2 0 0 0 0 0
............................................................................................TATCACAGTGGATGTTCTTTC....................................................... 21 2 3 0.67 2 2 0 0 0 0 0
..............................................................................................TCATAGTGGCTGTTCTTTTT...................................................... 20 1 3 0.67 2 2 0 0 0 0 0
............................................................................................TGTCACAGTGGCTGTTCTTCTT...................................................... 22 2 3 0.67 2 2 0 0 0 0 0
............................................................................................TATCACAGTGGCTGTTCATT........................................................ 20 1 3 0.67 2 2 0 0 0 0 0
............................................................................................TATAACAGTGGCTGTTCTTTT....................................................... 21 1 3 0.67 2 1 0 0 1 0 0
............................................................................................TATCACAGTGGATGTTCTTCTT...................................................... 22 2 3 0.67 2 2 0 0 0 0 0
............................................................................................TACTACAGCGGCTGTTCTTTTT...................................................... 22 3 3 0.67 2 2 0 0 0 0 0
............................................................................................TATCACAGTGCCTGTTCTTTTC...................................................... 22 2 3 0.67 2 2 0 0 0 0 0
...............................................................................................CACAGTGGCTGTTCTTTT....................................................... 18 0 3 0.67 2 2 0 0 0 0 0
...........................................................................................CTATCACAGTGGCTGGTCTTTTT...................................................... 23 2 3 0.67 2 2 0 0 0 0 0
............................................................................................TATTGCAGTGGCTGTTCTTTTT...................................................... 22 2 3 0.67 2 2 0 0 0 0 0
............................................................................................TATCACAGGGGCTGTTCTTTTC...................................................... 22 2 3 0.67 2 2 0 0 0 0 0
............................................................................................TACCACAGTGGCTGATCTTTTT...................................................... 22 2 3 0.67 2 2 0 0 0 0 0
............................................................................................TTTCACAGCGGCTGTTCTTTTT...................................................... 22 2 3 0.67 2 2 0 0 0 0 0
............................................................................................TATCCCAGTGGCTGTTCTTTT....................................................... 21 1 3 0.67 2 2 0 0 0 0 0
.............................................................................................TTCACAGTGGCTGTTCTTTTT...................................................... 21 1 3 0.67 2 2 0 0 0 0 0
............................................................................................TGTCACAGTGGCTGTTCTT......................................................... 19 1 3 0.67 2 2 0 0 0 0 0
............................................................................................TATCACAGTGGCTGTTCTTTCT...................................................... 22 1 3 0.67 2 2 0 0 0 0 0
............................................................................................TGTTACAGTGGCTGTTCTTTTC...................................................... 22 3 3 0.67 2 2 0 0 0 0 0
............................................................................................TATTACAGTGGCTGTTCTTTTA...................................................... 22 2 3 0.67 2 2 0 0 0 0 0
............................................................................................CGTCACAGTGGCTGTTCTTTTT...................................................... 22 2 3 0.67 2 2 0 0 0 0 0
............................................................................................TATTACACTGGCTGTTCTTTTT...................................................... 22 2 3 0.67 2 2 0 0 0 0 0
............................................................................................GATCACAGTGGCTGTTCTTT........................................................ 20 1 3 0.67 2 2 0 0 0 0 0
............................................................................................TATCACAGTGGCTGTTCATTT....................................................... 21 1 3 0.67 2 2 0 0 0 0 0
............................................................................................TTCCACAGTGGCTGTTCTTTTT...................................................... 22 2 3 0.67 2 2 0 0 0 0 0
............................................................................................TATCTCAGTGGCTGTTCTTTTC...................................................... 22 2 3 0.67 2 2 0 0 0 0 0
............................................................................................TATCACAGTGGCTGATCTTTGT...................................................... 22 2 3 0.67 2 2 0 0 0 0 0
............................................................................................TATTACAGTAGCTGTTCTTTTT...................................................... 22 2 3 0.67 2 2 0 0 0 0 0
............................................................................................TATCACAGTGGCTTTCTTTT........................................................ 20 3 20 0.60 12 12 0 0 0 0 0
............................................................................................TATTACAGTGGCTGTTCTTTTTGT.................................................... 24 2 2 0.50 1 1 0 0 0 0 0
............................................................................................TATTACAGTGACTGTTCTTTTT...................................................... 22 2 4 0.50 2 2 0 0 0 0 0
............................................................................................TGTCACAGTGGCTGTTCTTTTTGT.................................................... 24 2 2 0.50 1 1 0 0 0 0 0
............................................................................................TAGCACAGTGGCTGGTCTGTTTG..................................................... 23 3 2 0.50 1 0 0 1 0 0 0
.........................................................................................CGCTATCACAGTGGCTGTTCTTTT....................................................... 24 2 2 0.50 1 1 0 0 0 0 0
.............................................................................................AGCACAGTGGCTGTTCTTTTTG..................................................... 22 1 2 0.50 1 1 0 0 0 0 0
............................................................................................TTTTACAGTGGCTGTTCTTT........................................................ 20 2 4 0.50 2 2 0 0 0 0 0
............................................................................................TGCCACAGTGGCTGTTCTTTT....................................................... 21 2 4 0.50 2 2 0 0 0 0 0
............................................................................................TATCACAGTGGCTGTTCTTTTTGA.................................................... 24 1 2 0.50 1 1 0 0 0 0 0
............................................................................................TATCACAGTGGCTGTTCCTTC....................................................... 21 2 4 0.50 2 2 0 0 0 0 0
............................................................................................TACCACAGTGGCTGTTCTTTTTG..................................................... 23 1 2 0.50 1 1 0 0 0 0 0
............................................................................................TATCACAGTGGCTGTTCTTCTTCCT................................................... 25 3 2 0.50 1 0 0 1 0 0 0
........................................................ATAGAATAGTTGCTGTGCTATA.......................................................................................... 22 3 2 0.50 1 1 0 0 0 0 0
............................................................................................TACCACAGTGGCTTTTCTTTT....................................................... 21 2 4 0.50 2 2 0 0 0 0 0
............................................................................................TATCACAGTGGCTGGTCTTTTTTC.................................................... 24 2 2 0.50 1 0 0 1 0 0 0
............................................................................................TGTCACAGTTGCTGTTCTTTTT...................................................... 22 2 4 0.50 2 2 0 0 0 0 0
............................................................................................TATCACAGTGGCTGGTTTTTTTTC.................................................... 24 3 2 0.50 1 0 0 1 0 0 0
............................................................................................TATCACAGTGGCTGTTCTTTTTCCC................................................... 25 2 2 0.50 1 1 0 0 0 0 0
............................................................................................CGTCACAGTGGCTGTTCTTTT....................................................... 21 2 3 0.33 1 1 0 0 0 0 0
...............................................................................................CGCAGTGGCTGTTCTTTTT...................................................... 19 1 3 0.33 1 1 0 0 0 0 0
............................................................................................CTTCACAGTGGCTGTTCTTTTT...................................................... 22 2 3 0.33 1 1 0 0 0 0 0
............................................................................................TGTCACAGTGGCTGTTTTTTTT...................................................... 22 2 3 0.33 1 1 0 0 0 0 0
............................................................................................TATCACAGCGGCTGGTCTTTTT...................................................... 22 2 3 0.33 1 0 0 1 0 0 0
..............................................................................................TGACAGTGGCTGTTCTTTTT...................................................... 20 1 3 0.33 1 1 0 0 0 0 0
............................................................................................TACCACAGTGGCTGTTTTTTTT...................................................... 22 2 3 0.33 1 1 0 0 0 0 0
............................................................................................GATTACAGTGGCTGTTCTTTTT...................................................... 22 2 3 0.33 1 1 0 0 0 0 0
............................................................................................GACCACAGTGGCTGTTCTTTTT...................................................... 22 2 3 0.33 1 1 0 0 0 0 0
............................................................................................TTTCACAGTGGCTGGTCTTTTT...................................................... 22 2 3 0.33 1 1 0 0 0 0 0
............................................................................................TATCACAGTGGCTGTTCTTTTGA..................................................... 23 2 3 0.33 1 1 0 0 0 0 0
.........................................................................................ATCTATCACAGTGGCTGGTCTTTTT...................................................... 25 3 3 0.33 1 1 0 0 0 0 0
............................................................................................TTTCACAGTGGCTGTTCTTTC....................................................... 21 2 3 0.33 1 1 0 0 0 0 0
............................................................................................TATCACAATGGCTGTTCTTTT....................................................... 21 1 3 0.33 1 1 0 0 0 0 0
............................................................................................TGTCACAGTGGCTGTCCTTTTT...................................................... 22 2 3 0.33 1 1 0 0 0 0 0

Anti-sense strand reads

GTAGTTTTTATTGCTCAATCCACTGTCCTGAGCGTCCTATGGGCGGAAATTTCATCTCTCTTATCACCGACACGACATTCAAAGTTTTAGATATAGTGTCACCGACAAGAAAAACGTGGATTTCACGGTTTGTCGGTTTGGGCTCTTACAAGACACTAAAAAGCAATA

***************************************..(((((((..((((((((((((((.((((((.((((.(((....))).)))).)))))).))))))))))))))...))))).))..***************************************** 		Read size # Mismatch Hit Count Total Norm Total V055

head

 M058

embryo

 M044

female body

 V039

embryo
...............CACTCCACTGTCCTGATGGT..................................................................................................................................... 20 3 2 0.50 1 1 0 0 0
..............................................................................TCAAAGTTTTAAATATAGTGT..................................................................... 21 1 3 0.33 1 1 0 0 0
.............................................................................TTCAAAGTTTTAAATATAG........................................................................ 19 1 9 0.22 2 0 0 2 0
..............................................................................TCAAAGTTTTAAATATAGCGT..................................................................... 21 2 5 0.20 1 0 1 0 0
.................................................................................AAGTTTTAAATATAGTGT..................................................................... 18 1 7 0.14 1 0 0 0 1
..............................................................................TCAAAGTTTTAAATATAG........................................................................ 18 1 9 0.11 1 0 1 0 0
............................................................................GTTCAAAGTTTTAAATATAG........................................................................ 20 2 10 0.10 1 0 1 0 0
..........................CCAGAGCGTCAAATGGGCG........................................................................................................................... 19 3 17 0.06 1 1 0 0 0
................................CGGCCTATCGTCGGAAATT..................................................................................................................... 19 3 20 0.05 1 0 0 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Type Alignment
droAna3 scaffold_13266:9731770-9731937 + dan-mir-6-1 Known_mirbase CATC---------AA-AAATAAC-G-A------GTTAGGTGACA-------------------------------------------------------------------GGACTC----GCAG-G-ATACCCGCCTTTAAAGTAGAGAGAATAGTGGCTGTGCTGTAAGTTTCA------AAATCTATATCACAGTGGCTGTTCTTTTTGCACCTAAAGTGC--CAAACAGCCAAA-CC--CGAGAAT---GT--TC-TGT--------GAT-TTT-T---------------------------CGT------TAT
droBip1 scf7180000396427:874722-874886 + CATC---------AG-AGA---TCG-A------G-TTAGTGA--------------------------------------CTTG----A---------------------AGGAGTC----GCAG-G-ATACCCGCCTTTAAAGTAGAGAGAATAGTGGCTGTGCTGTATGTTACCA-------TTCTATATCACAGTGGCTGTTCTTTTTGCACCTAAAGTGC--CAAACAGCCAAGACC--CAAGAAT----------TGT--------GAT-TTT-T---------------------------CGC------CAT
droKik1 scf7180000302679:88913-89079 - CAAC---------GATTGA---T------------------------------------------------------CAG------------------TTCTAAGGTTCTATGAGC-AAGG----AT-CACACAGCCTTTAAAGTAGAGAGAATAGCTGCTGCGCTGTATGTTTGC-------CATCTATATCACAGTGGCTGTTCTTTTTGTACCTAAAGTGC--GAAACACCAAGG-CT--CA------------TTTGG---GTTTATATT-TTC-T---------------------------TAG------TGT
droFic1 scf7180000454039:847616-847786 - CATC---------AA-AGGAAAAAACA---------------------------------------T----------------ACTTAAAGTTACAATTT-----------------TAGTGATG-A-ATCACAGCCTTTAAAGTAGAGGGAATAGTTGCTGTGCTGTAAGTTATTTATCAAAAATCTATATCACAGTGGCTGTTCTTTTTGTACCTAAAGTGC--CAAACATCAATG-TTT------------T-----TG----TT-----TT-TC--T--------------------------TTT------CGT
droEle1 scf7180000491201:2013549-2013718 - CATC---------GATGGGAAATACAA---------------------------------------TCCAAAAA---CAG------------------TT-----------------CTGTGCCG-A-ATCTCAGCCTTTAAAGTAGAGGGAATAGTTGCTGTGCTGTAAGTAACTAA-ACTATACCTATATCACAGTGGCTGTTCTTTTTGTACCTAAAGTGC--CAAACATCAAAG-CGGCC---AAT------A--------TT----TG-T-TT--T--------------------------CAT------TTT
droRho1 scf7180000780066:74037-74203 + CATC---------GA-GGGAAATAAGA---------------------------------------TTCGAAATTATCAG------------------TT-----------------CTGTGCCA-A-ATCACAGCCTTTAAAGTAGAGGGAATAGTTGCTGTGCTGTAAGTTACTA--ACTATACCTATATCACAGTGGCTGTTCTTTTTGTACCTAAAGTGC--CAAACATCAAAG-CTC------------T-----AG----TT-----TT-AT--T--------------------------TTT------CCT
droBia1 scf7180000302143:3059388-3059546 - CATC---------AA-GGGAAATACCA---------------------------------------TCCGAAATTACCTG------------------TC-----------------CAATGCTG-A-AACACAGCCTTTAAAGTAGAGGGAATAGTTGCTGTGCTGTAAGTTACCAA-GCTATATCTATATCACAGTGGCTGTTCTTTTTGTACCTAAAGTGC--CTGACATCAGAC-GTT------------T----------------------------------------------------AGT------TCT
droTak1 scf7180000415384:84425-84581 + CCCCAAAAACATCAA-GGGATATACTA---------------------------------------T----------TAA------------------CC-----------------AAG---TA-A-AACATAGCCTTTAAAGTAGAGGGAATAGTTGCTGTGCTGTAAGTTACTAA-GCTATATCTATATCACAGTGGCTGTTCTTTTTGTACCTAAAGTGC--CTAACACCAGTC-GT----------------------------------TTT-A---------------------------GTT------TAT
droEug1 scf7180000409474:2397218-2397378 + CATC---------AA-GGTTATT-AAA-CTAATAC----------------------------------------------------------------T-----------------CAGTGCCA-A-ATCACAGCCTTTAAAGTAGAGGGAATAGTTGCTGTGTTGTATGCTACTTA-ACAATATCTATATCACAGTGGCTGTTCTTTTTGCATCTAAAGTGA--CTAACATCATTC-GTT------------T-----TGTTT--T-T-TG----T--T--------------------------TTA------TAT
dm3 chr2R:15548473-15548643 - dme-mir-6-1 Known_mirbase CATC---------AA-GGAAAATGAAA---------------------------------------GTCAAAGTTGGCAGCTTACTTAA--------------------------------ACTT-A-ATCACAGCCTTTAATGTAGAGGGAATAGTTGCTGTGCTGTAAGTTAATAT-ACCATATCTATATCACAGTGGCTGTTCTTTTTGTACCTAAAGTGC--CTAACATCATTA-TT-------------TAA--------TTT-----TT-TT--T--------------------------TTT------TTT
droSim2 2r:16195746-16195915 - dsi-mir-6-1 Known_mirbase CATC---------AA-GGAAAATGAAA---------------------------------------GCCA-AGTTGGCAGCTTACT-AA--------------------------------ACTT-A-ATCACAGCCTTTAAAGTAGAGGGAATAGTTGCTGTGCTGTAAGTTTATAT-ACCGTATCTATATCACAGTGGCTGTTCTTTTTGTACCTAAAG-GCATTTTACATCATTA-TT-------------TAA--------TTT-----AC-TT--T--------------------------TTT------TTT
droSec2 scaffold_1:13063207-13063372 - dse-mir-6-1 Known_mirbase CATC---------AA-GGAAAATTA-A---------------------------------------GCCA-AGTTGGCAGCTTACT-AA--------------------------------ACTT-A-ATCACAGCCTTTAAAGTAGAGGGAATAGTTGCTGTGCTGTAAGTTAATAT-ACCATATCTATATCACAGTGGCTGTTCTTTTTGTACCTAAAG-GCATTTTACATCATTA-TT-------------TAA--------TTT-----AC--------------------------------TTT------TTT
droYak3 2R:13624148-13624320 + dya-mir-6-1 Known_mirbase CATC---------AA-GGGAAATGAAA---------------------------------------GCCAAAGTCGGCATCTCACT-AA--------------------------------GTTT-A-ATCACAGCCTTTAACGTAGAGGGAATAGTTGCTGTGCTGTAAGTTAATAA-CAAATATCTATATCACAGTGGCTGTTCTTTTTGTACCTAAAGTGC--CTAACATCATTA-AT--------------AATT-TGT--------TG-CTTT-T---------------------------TTT------GCT
droEre2 scaffold_4845:9748724-9748894 - der-mir-6-1 Known_mirbase CATC---------AATGGGAAATGAAA---------------------------------------GCCAAAGTTGCCAGCTTACT-TA--------------------------------GCTA-A-ATCGCAGCCTTTAAAGTAGAGGGAATAGTTGCCGTGCTGTAAGTTAATAT-ATCATATCTATATCACAGTGGCTGTTCTTTTTGTACCTAAAGTGC--CTAACATCATCA-TT-------------T-----TGT--------TGC-CTT-A---------------------------TTT------TGG
dp5 3:12677053-12677218 - dps-mir-6-1 Known_mirbase CAT-------------GGGAAACGAAA-----CGCTCAGCGGTG-------------------------------------------------------------------GA-------G----ACCACACCAGCCTTTGAAGTAGAGAGAATAGTTGCTGTGCTATATGTCCTTCG-ACT--CTATATATCACAGTGGCTGTTCTTTTTGTACCTAAAGTGC--CAAACAGCCAAG-G-------AATCGCGT-----TGTGC--A-G-TG-CTTC-C---------------------------AGT------TAC
droPer2 scaffold_2:8906454-8906619 + dpe-mir-6-1 Known_mirbase CAT-------------GGGAAACGAAA-----CACTCAGCGATG-------------------------------------------------------------------GA-------G----ACCACACCAGCCTTTGAAGTAGAGAGAATAGTTGCTGTGCTATATGTCCTTCG-ACT--CTATATATCACAGTGGCTGTTCTTTTTGTACCTAAAGTGC--CAAACAGCCAAG-G-------AATCGCGT-----TGTGC--A-G-TG-CTTC-C---------------------------AGT------TAC
droWil2 scf2_1100000004514:1651289-1651448 - dwi-mir-6-1 Known_mirbase TATC---------AA-CAATATC-C-A---------------------------------------G-CAAAGTTTTCA---------------------------------------AGTGGTTTT-CAACCAGCCTTTAAAGTAGAGAGAATAGTTGCTGTGTTTTATGCCCTTT--TC-AATTTCATATCACAGTGGCTGTTCTTTTTGTGCCTAAAGTGC--CCCACAACAACA-AC-------------AAC--------AAC-----AC-AT--T--------------------------CAA------AAT
droVir3 scaffold_12875:4112554-4112759 + dvi-mir-6-1 Known_mirbase CAAC---------AC-CACATAC--GATCTA-T--ATCCATGTCTATATAGACTTAAAACTATATCGCCC-AGTTATCTG------------------------------------------------TTTATAGCCTTTAAAGTAGAGAGAATAGACGCTGTGCTGTATGTTTTGC--GTATGGTCTATATCACAGTGGCTGTTCTTTTTGTACCTGAAGCGC--CGTACAACGTTG-AT-------------TTC--------TT---------------AAATTGTGAAAATTGAAT--AAATATTT------GCT
droMoj3 scaffold_6496:20936248-20936445 - dmo-mir-6-1 Known_mirbase CAAT---------AT-GAATGT--GAA-----TATTTATAAGTGTATAT--------------------ATATTTATTTC------------------TC-----------------TAGTGT-----TTTTTCGCCTTTAAAGTAGAGAGAATAGATGCTGTGA-----GTATATCT-GTTGCATTTATATCACAGTGGCTGTTCTTTTTGTACCTAAATGGC--CAGACAGCATTA-TT-------------T----------------------TTCGCCAATTGCCAAATATAAAGTGAAACATGAGCACAGTAT
droGri2 scaffold_15112:2108194-2108309 - dgr-mir-6-1 Known_mirbase --------------------------------------------------------------------------------------------------------------------------------------GCCTTTAATGTAAAGAGAATAGATGCTGTGCTGTATGTTGAAC--GTATTGTCTATATCACAGTGGCTGTTCTTTTTGTACCAAAAGTGC--CGTACAACAAAA-TG---------------------AGT--A-A-TG-T--------------------------------TAT------CAA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droAna3
CATC---------AA-AAATAAC-G-A------GTTAGGTGACA-------------------------------------------------------------------GGACTC----GCAG-G-ATACCCGCCTTTAAAGTAGAGAGAATAGTGGCTGTGCTGTAAGTTTCA------AAATCTATATCACAGTGGCTGTTCTTTTTGCACCTAAAGTGC--CAAACAGCCAAA-CC--CGAGAAT---GT--TC-TGT--------GAT-TTT-T---------------------------CGT------TATSizeHit CountTotal NormTotalM044

Female-body		M058

Embryo		V039

Embryo		V055

Head		V105

Male-body		V106

Head
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTT............................................................................................................22315043.3345130367447520074
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTTT.............................................................................................................2133049.3391489790392028
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTC............................................................................................................223462.001386013860000
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTT..............................................................................................................203276.00828267920082
...................................................................................................................................................AGAGAATAGTGGCTGTGCTGTA......................................................................................................................................................22172.00720720000
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTTC.............................................................................................................21357.6717301720001
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTC..............................................................................................................20337.0011101110000
..............................................................................................................................................................................................ATCACAGTGGCTGTTCTTTTT............................................................................................................21335.6710740670000
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTC...........................................................................................................23334.6710401040000
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTA...........................................................................................................23333.671013980000
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTT...............................................................................................................19317.33528390023
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTG...........................................................................................................23214.00282240011
...............................................................................................................................................................................................TCACAGTGGCTGTTCTTTTTGC..........................................................................................................22112.00120120000
................................................................................................................................................................................................CACAGTGGCTGTTCTTTTT............................................................................................................1938.67260260000
...............................................................................................................................................................................................TCACAGTGGCTGTTCTTTTT............................................................................................................2038.00245190000
...................................................................................................................................................AGAGAATAGTGGCTGTGCTGT.......................................................................................................................................................2117.007070000
.............................................................................................................................................................................................TATCACAGTGGCTGTTCT................................................................................................................1836.00180180000
..............................................................................................................................................................................................ATCACAGTGGCTGTTCTTTT.............................................................................................................2036.00187110000
.................................................................................................................................................................................................ACAGTGGCTGTTCTTTTT............................................................................................................1836.00180180000
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTA............................................................................................................2235.33160150001
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTGC..........................................................................................................2415.005050000
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTTG.............................................................................................................2134.33130130000
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTG............................................................................................................2233.3310190000
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTAA..........................................................................................................2433.009170010
...................................................................................................................................................AGAGAATAGTGGCTGTGCTGC.......................................................................................................................................................2113.003030000
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTGT..........................................................................................................2422.505050000
....................................................................................................................................................GAGAATAGTGGCTGTGCTGTA......................................................................................................................................................2112.002110000
..............................................................................................................................................................................................ATCACAGTGGCTGTTCTTT..............................................................................................................1932.006330000
...............................................................................................................................................................................................TCACAGTGGCTGTTCTTTT.............................................................................................................1931.675050000
............................................................................................................................................................................................ATATCACAGTGGCTGTTCTTTT.............................................................................................................2231.675050000
...................................................................................................................................................AGAGAATAGTGGCTGTGCTG........................................................................................................................................................2011.001010000
..........................................................................................................................................TTAAAGTAGAGAGAATAGTGGCT..............................................................................................................................................................2311.001010000
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTC...............................................................................................................1931.003030000
...................................................................................................................................................AGAGAATAGTGGCTGTGCT.........................................................................................................................................................1911.001010000
..............................................................................................................................................................................................ATCACAGTGGCTGTTCTTTTC............................................................................................................2131.003030000
...................................................................................................................................................AGAGAATAGTGGCTGTGCTGTC......................................................................................................................................................2211.001010000
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTAA...........................................................................................................2330.672020000
............................................................................................................................................................................................ATATCACAGTGGCTGTTCTTT..............................................................................................................2130.672020000
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTTAC............................................................................................................2230.672020000
................................................................................................................................................................................................CACAGTGGCTGTTCTTTT.............................................................................................................1830.672020000
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTGA..........................................................................................................2420.501010000
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTGA...........................................................................................................2330.331010000
droBip1
CATC---------AG-AGA---TCG-A------G-TTAGTGA--------------------------------------CTTG----A---------------------AGGAGTC----GCAG-G-ATACCCGCCTTTAAAGTAGAGAGAATAGTGGCTGTGCTGTATGTTACCA-------TTCTATATCACAGTGGCTGTTCTTTTTGCACCTAAAGTGC--CAAACAGCCAAGACC--CAAGAAT----------TGT--------GAT-TTT-T---------------------------CGC------CATSizeHit CountTotal NormTotal
No Reads
droKik1
CAAC---------GATTGA---T------------------------------------------------------CAG------------------TTCTAAGGTTCTATGAGC-AAGG----AT-CACACAGCCTTTAAAGTAGAGAGAATAGCTGCTGCGCTGTATGTTTGC-------CATCTATATCACAGTGGCTGTTCTTTTTGTACCTAAAGTGC--GAAACACCAAGG-CT--CA------------TTTGG---GTTTATATT-TTC-T---------------------------TAG------TGTSizeHit CountTotal NormTotal
No Reads
droFic1
CATC---------AA-AGGAAAAAACA---------------------------------------T----------------ACTTAAAGTTACAATTT-----------------TAGTGATG-A-ATCACAGCCTTTAAAGTAGAGGGAATAGTTGCTGTGCTGTAAGTTATTTATCAAAAATCTATATCACAGTGGCTGTTCTTTTTGTACCTAAAGTGC--CAAACATCAATG-TTT------------T-----TG----TT-----TT-TC--T--------------------------TTT------CGTSizeHit CountTotal NormTotal
No Reads
droEle1
CATC---------GATGGGAAATACAA---------------------------------------TCCAAAAA---CAG------------------TT-----------------CTGTGCCG-A-ATCTCAGCCTTTAAAGTAGAGGGAATAGTTGCTGTGCTGTAAGTAACTAA-ACTATACCTATATCACAGTGGCTGTTCTTTTTGTACCTAAAGTGC--CAAACATCAAAG-CGGCC---AAT------A--------TT----TG-T-TT--T--------------------------CAT------TTTSizeHit CountTotal NormTotal
No Reads
droRho1
CATC---------GA-GGGAAATAAGA---------------------------------------TTCGAAATTATCAG------------------TT-----------------CTGTGCCA-A-ATCACAGCCTTTAAAGTAGAGGGAATAGTTGCTGTGCTGTAAGTTACTA--ACTATACCTATATCACAGTGGCTGTTCTTTTTGTACCTAAAGTGC--CAAACATCAAAG-CTC------------T-----AG----TT-----TT-AT--T--------------------------TTT------CCTSizeHit CountTotal NormTotal
No Reads
droBia1
CATC---------AA-GGGAAATACCA---------------------------------------TCCGAAATTACCTG------------------TC-----------------CAATGCTG-A-AACACAGCCTTTAAAGTAGAGGGAATAGTTGCTGTGCTGTAAGTTACCAA-GCTATATCTATATCACAGTGGCTGTTCTTTTTGTACCTAAAGTGC--CTGACATCAGAC-GTT------------T----------------------------------------------------AGT------TCTSizeHit CountTotal NormTotal
No Reads
droTak1
CCCCAAAAACATCAA-GGGATATACTA---------------------------------------T----------TAA------------------CC-----------------AAG---TA-A-AACATAGCCTTTAAAGTAGAGGGAATAGTTGCTGTGCTGTAAGTTACTAA-GCTATATCTATATCACAGTGGCTGTTCTTTTTGTACCTAAAGTGC--CTAACACCAGTC-GT----------------------------------TTT-A---------------------------GTT------TATSizeHit CountTotal NormTotal
No Reads
droEug1
CATC---------AA-GGTTATT-AAA-CTAATAC----------------------------------------------------------------T-----------------CAGTGCCA-A-ATCACAGCCTTTAAAGTAGAGGGAATAGTTGCTGTGTTGTATGCTACTTA-ACAATATCTATATCACAGTGGCTGTTCTTTTTGCATCTAAAGTGA--CTAACATCATTC-GTT------------T-----TGTTT--T-T-TG----T--T--------------------------TTA------TATSizeHit CountTotal NormTotal
No Reads
dm3
CATC---------AA-GGAAAATGAAA---------------------------------------GTCAAAGTTGGCAGCTTACTTAA--------------------------------ACTT-A-ATCACAGCCTTTAATGTAGAGGGAATAGTTGCTGTGCTGTAAGTTAATAT-ACCATATCTATATCACAGTGGCTGTTCTTTTTGTACCTAAAGTGC--CTAACATCATTA-TT-------------TAA--------TTT-----TT-TT--T--------------------------TTT------TTTSizeHit CountTotal NormTotalGSM154618

Ovary		GSM154620

Ovary		GSM154621

Ovary		GSM154622

Ovary		GSM180328

Head		GSM180329

Mixed-body		GSM180330

Embryo		GSM180331

Embryo		GSM180332

Embryo		GSM180333

Embryo		GSM180334

Larvae		GSM180335

Disc		GSM180336

Pupae		GSM180337

S2		GSM239041

Head		GSM239050

Head		GSM239051

S2		GSM239052

S2		GSM246084

Head		GSM266765

S2		GSM280082

Ovary		GSM280083

Ovary		GSM280084

Ovary		GSM280085

Testis		GSM280086

Ovary		GSM280087

S2-NP		GSM280088

S2-NP		GSM312995

Head		GSM313160

Head		GSM313161

Head		GSM313162

Head		GSM313163

Head		GSM313164

Head		GSM313165

Head		GSM343287

Embryo		GSM379050

Ovary		GSM379051

Ovary		GSM379052

Ovary		GSM379053

Ovary		GSM379054

Ovary		GSM379055

Ovary		GSM379056

Ovary		GSM379057

Ovary		GSM379058

Ovary		GSM379059

Ovary		GSM379060

Ovary		GSM379061

Ovary		GSM379062

Ovary		GSM379063

Ovary		GSM379064

Ovary		GSM379065

Ovary		GSM379066

Ovary		GSM379067

Ovary		GSM424739

S2		GSM424740

S2		GSM424741

S2		GSM467729

Female-body		GSM467730

Female-body		GSM467731

Female-body		M002

CS		M003

Male-body		M004

Male-body		M005

ML-DmD32		M006

ML-DmD32		M029

OSC		M030

OSC		M031

OSC		M032

S2-R+		M033

S2-R+		M034

S2-R+		M035

S2-R+		M036

S2-R+		M037

S2-R+		M038

S2-R+		M039

S2-R+		M048

S2-R+		OSS2

OSS		OSS6

OSS		OSS7

OSS		OSS8

OSS		S1

Head		S10

Embryo		S11

Embryo		S12

Embryo		S13

Embryo		S14

Embryo		S15

S2-GMR		S16

Kc		S17

Larvae		S18

Larvae		S19

Pupae		S2

Head		S20

Pupae		S21

Disc		S22

Head		S23

Female-body		S24

Male-body		S25

Larvae		S26

Larvae		S27

Pupae		S28

Pupae		S29

Head		S3

Male-body		S30

S2-GMR		S31

S2		S32

S2		S33

Kc		S34

Kc		S35

Kc		S4

Female-body		S5

Disc		S6

Embryo		S7

Embryo		S8

S2		S9

Embryo		SRR001337

Head		SRR001338

Head		SRR001339

Head		SRR001340

Head		SRR001341

Head		SRR001342

Head		SRR001343

Head		SRR001344

Head		SRR001345

Head		SRR001346

Head		SRR001347

Head		SRR001348

Head		SRR001349

Head		SRR001664

Head		SRR010951

Ovary		SRR010952

Ovary		SRR010953

Ovary		SRR010954

Ovary		SRR010955

Ovary		SRR010956

Ovary		SRR010957

Ovary		SRR010958

Ovary		SRR010959

Ovary		SRR010960

Ovary		SRR014268

Embryo		SRR014269

Embryo		SRR014270

Embryo		SRR014271

Embryo		SRR014272

Embryo		SRR014273

Ovary		SRR014274

Ovary		SRR014275

Ovary		SRR014276

Ovary		SRR014277

Ovary		SRR014278

Ovary		SRR014279

Ovary		SRR014280

Ovary		SRR014281

Ovary		SRR014282

Ovary		SRR023197

S2		SRR023399

S2		SRR023400

S2		SRR023402

S2		SRR023407

S2		SRR029028

S2		SRR029029

S2		SRR029030

S2		SRR029031

S2		SRR029032

S2		SRR029033

S2		SRR029608

Head		SRR029633

Head		SRR030145

gb3		SRR031692

Head		SRR031693

Head		SRR031694

Head		SRR031696

Head		SRR031697

Head		SRR031698

Head		SRR031699

Head		SRR031700

Head		SRR031701

Head		SRR031702

Head		SRR031703

Head		SRR031704

Head		SRR032092

S2		SRR032093

S2		SRR032094

S2		SRR032095

S2-NP		SRR032096

S2-NP		SRR032152

Head		SRR060643

Testis		SRR060644

Ovary		SRR060645

Testis		SRR060646

Ovary		SRR060647

Ovary		SRR060648

Ovary		SRR060649

Ovary		SRR060650

Testis		SRR060651

Ovary		SRR060652

Testis		SRR060653

Ovary		SRR065151

Ovary		SRR065152

Ovary		SRR065153

Ovary		SRR065154

Ovary		SRR065155

Ovary		SRR065800

Ovary		SRR065801

Ovary		SRR065802

Ovary		SRR065803

Ovary		SRR065804

Ovary		SRR065805

Ovary		SRR065806

Ovary		SRR065807

Ovary		SRR097865

S2-NP		SRR097866

S2-NP		SRR097867

S2-NP		SRR298536

Ovary		SRR298537

Ovary		SRR298711

Ovary		SRR298712

Ovary		SRR317110

Ovary		SRR317111

Ovary		SRR317112

Ovary		SRR317113

Ovary		SRR317114

Ovary		SRR317115

Ovary		SRR317116

Ovary		SRR317117

Ovary		SRR341115

S2		SRR341116

S2		SRR341117

S2		SRR341118

S2		SRR351332

Mixed-body		SRR351333

Mixed-body		T004

OSC		T005

CME-L1		V001

Embryo		V002

Embryo		V003

S2		V006

Female-body		V007

Head		V008

S2		V009

CME-L1		V010

ML-DmD20-C5		V011

Sg4		V012

Male-body		V013

Head		V014

DTT		V015

DreRFHV		V018

Kc167		V019

GM2		V020

S2-R+		V021

ML-DmD21		V022

ML-DmD32		V023

Head		V024

Kc167		V025

S2-R+		V026

1182-2H		V027

ML-DmD21		V028

CME-W1-Cl.8+		V029

ML-DmD9		V030

ML-DmD8		V031

GM2		V032

S1		V033

CME-W1-Cl.8+		V034

ML-DmD16-C3		V035

ML-DmD32		V036

ML-DmD20-C5		V037

S2		V038

S2		V063

Ovary		V0632

Ovary		V064

Ovary		V0642

Ovary		V065

Ovary		V0652

Ovary		V066

Ovary		V0662

Ovary		V067

S2-NP		V073

mbn2		V074

S3		V075

ML-DmBG1-C1		V076

ML-DmBG3-C2		V077

Head		V078

Head		V079

Head		V080

Head		V081

Embryo		V082

Embryo		V083

Male-body		V084

Female-body		V085

CME-W2		V086

Female-body		V088

Ovary		V0882

Ovary		V089

Ovary		V0892

Ovary		V090

Male-body		V091

fGS/OSS		V092

Male-body		V093

Male-body		V094

S2-R+		V095

S2-R+		V096

Ovary		V097

Ovary		V098

Ovary		V125

ML-DmD9		V126

CME-L1		V127

G2		V128

S3		V129

ML-DmBG1-C1		V130

ML-DmBG3-C2		V131

ML-DmD16-C3		V132

ML-DmD32		V133

Sg4		V134

ML-DmD8		V135

CME-W2		V136

Male-body		V137

Head		V138

Male-body		V139

Female-body		V140

Female-body		V141

Female-body		V142

Female-body		V144

OSC		V145

S2		V146

S1		V147

1182-2H		V148

mbn2		GSM1528798

follicle cells
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTT............................................................................................................22320801.006240300008135722249235251300000010000000000000000000000000000000000000500000000000000000000000020472170000000000000000000000000110000000000000000000000000000100000000000000000000000010000000000000000000000100000000000000000000000010015459211244212162759343046154161800002000000000000000000000000000000000197080077012300000000637004648179130060059000010003175384212536104243868269366685913240
...................................................................................................................................................AGGGAATAGTTGCTGTGCTGTA......................................................................................................................................................22119494.0019494000000751581800000000000000000000000020500000001000000000000000000000000000000000000003076389733929474110110000000311210711417442800205692920010000000000000000000005105309273530000000000000000000000000000001000000000000001000000000000000000000000100100215013600000004127000010100000000000000000000000000000000000000000010123402500200000000002104030001100002120010000
...................................................................................................................................................AGGGAATAGTTGCTGTGCTG........................................................................................................................................................2015013.0050130000001710000000000000000000000000416600000000000000000000000000000000000000000000008110052800000000000001000000134600600120000000000000000000000003597921500002000000000000000000000000000000000000000000000000000000000100000000000000000000000000330000000000000000000000000000000000110000000000000490100200000000000000000000100000000000000000
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTTT.............................................................................................................2134534.671360400003046283290234340100000000000000000000000000000000000001000020000000000000000000000000015020000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000010000000000000000110033120213534787185631510020300000000000000000000000000000000000000043028028049000000004601738273180020016000000014114203192122726892863001423102157210
...................................................................................................................................................AGGGAATAGTTGCTGTGCTGT.......................................................................................................................................................2111791.0017910000005900000000000000000000000000164000000000000000000000000000000000000000000000018338154243000000000000000100120321760016204100000000000000000000000067410240900000000000000000000000000000000000000000000000000000000000000000000000000000000000000000530000000000000000000001000000000000000000000000000763000000000000000000000000000000000000000000
....................................................................................................................................................GGGAATAGTTGCTGTGCTGTA......................................................................................................................................................2111069.0010690000001012100000000000000000000000003000000000000000000000000000000000000000000000025442106414200010001010000200003296200274052000000000000000000000000011000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000010000000000000000000000000000000000000000000000000092000000000000000000000000000000000000000000
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTT..............................................................................................................203778.672336000000415183400000000000000000000000000000000000000000000001000000000000000000000000001410000100000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000300000000000000000000000000116410359327647014400000000000000000000000000000000000000117050705000010004796813404002000000031024081110015011117437113172927090
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTT...............................................................................................................193418.331255000000000000000000000000000000000000000000000000000000001000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000001000000100205110201100080000000000000000000000000000000000000003010310000000003846242015000010000011000100100000002641223295323030
...................................................................................................................................................AGGGAATAGTTGCTGTGCTGTAA.....................................................................................................................................................231372.003720000001000000000000000000000000000200000000000000000000000000000000000000000000000291400480000000000000000000058000200400000000000000000000000004627500000000000000000000000000000000000000000000000000000000000000000000000000000000100000000110000000000000000000000000000000000000000000000000195000000000000000010000000000000000000000000
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTG...........................................................................................................232281.005620000003121360000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004203249014500200000000000000000000000000000000000000010002000000000003298700000000000000001003000030000003690011010
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTGT..........................................................................................................241193.00193000000052200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030270820000000000000000000000000000000000000000000000001000000000128900000000000000000000000000000000130001010
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTC...........................................................................................................233152.334570000000901000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003014002000000000000000000000000000000000000000201010000000000112630600000000000000000000000000000000000000000
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTA............................................................................................................223125.00375000020241847730000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000140004063004000000000000000000000000000000000000000301040200000000011300000101000000001101000010000101200000010
...................................................................................................................................................AGGGAATAGTTGCTGTGCT.........................................................................................................................................................19197.00970000000000000000000000000000000000240000000000000000000000000000000000000000000000150122200000000000000000000000003002000000000000000000000000054800000000000000000000000000000000000000000000000000000000000000000000000000000001000000000021000000000000000000000000000000000000000000000000013100200000000000000000000000000000000000000
....................................................................................................................................................GGGAATAGTTGCTGTGCTGT.......................................................................................................................................................20188.008800000002000000000000000000000000005300000000000000000000000000000000000000000000008000120000000000000000000033000100100000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000000000000000000000
...................................................................................................................................................AGGGAATAGTTGCTGTGCTGTT......................................................................................................................................................22179.00790000000100000000000000000000000000000000000000000000000000000000000000000000000001351170000000000000003000021000000040000000000000000000000001102100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000010000000000000000000015000000000000000000000000000000000000000000
...................................................................................................................................................AGGGAATAGTTGCTGTGCTGTC......................................................................................................................................................22172.00720000000000000000000000000000000000000000000000000000000000000000000000000000000004000400000000000000010000010000000000000000000000000000000023430000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000049000100000000000000000000000000000000000000
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTA...........................................................................................................23371.0021300000012894000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000251133034410008000000000000000000000000000000000000000100101001300000000016200000300000000000000000000000001170000000
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTC............................................................................................................22370.332110000001459311310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000130500010000000000000000000000000000000000000001000000000000000571400000000000000000000000000000000110000000
...................................................................................................................................................AGGGAATAGTTGCTGTGCTGTAAA....................................................................................................................................................24165.0065000000000000000000000000000000000010000000000000000000000000000000000000000000000116001000000000000000000000000001000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000035000000000000000000000000000000000000000000
.............................................................................................................................................................................................TATCACAGTGGCTGTTCT................................................................................................................18350.33151000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001200200000000000000000000000000000000000000010000010000000001112310000000000000000000000000000011240000000
.................................................................................................................................................................................................ACAGTGGCTGTTCTTTTT............................................................................................................18347.67143000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003010150800000000000000000000000000000000000000000000000101000000000971400000000000000000000000000000000110000000
.........................................................................................................................................................................AGTTAATAT-ACCATATCTA..................................................................................................................................19147.00470000000000000000000000000000000000000000000000000000000000000000000000000000000002260490000000000000000000002000100200000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTAA..........................................................................................................24335.00105000010101000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000002211310202003000000000000000000000000000000000000000809012040000000001000000301000000000000010000000000000000000
...................................................................................................................................................AGGGAATAGTTGCTGTGCTGTACTG...................................................................................................................................................25130.00300000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................ATCACAGTGGCTGTTCTTTTT............................................................................................................21329.67890000000310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020004153002000000000000000000000000000000000000000102000000000000057400000000000000000110000000000010010000000
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTG............................................................................................................22325.007500001082812500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000204000000000000000000000000000000000000000000000100000000000009400000000000000000000000000000000100000000
...................................................................................................................................................AGGGAATAGTTGCTGTGCTGTG......................................................................................................................................................22125.0025000000100000000000000000000000000000000000000000000000000000000000000000000000000801040000000000000001000000000100000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008000000000000000000000000000000000000000000
.....................................................................................................................................................GGAATAGTTGCTGTGCTGTA......................................................................................................................................................20121.0021000000000000000000000000000000000010000000000000000000000000000000000000000000000830050000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
....................................................................................................................................................GGGAATAGTTGCTGTGCTG........................................................................................................................................................19120.0020000000000000000000000000000000000040000000000000000000000000000000000000000000000600010000000000000000000001000200300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000
...................................................................................................................................................AGGGAATAGTTGCTGTGCTGTAAG....................................................................................................................................................24120.00200000000000000000000000000000000000000000000000000000000000000000000000000000000002000100000000000000000000000001003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000013000000000000000000000000000000000000000000
......................................................................................................................................................GAATAGTTGCTGTGCTGTA......................................................................................................................................................19118.00180000000000000000000000000000000000000000000000000000000000000000000000000000000001000210000000000000000000000000001300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTTA.............................................................................................................21316.6750000010515131000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000004000000000000000000000000000000001000000000
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTTC.............................................................................................................21313.67410000202427000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001001000000000000000000000000000000000000000000000000000000000015700000000000000000000000000000000000000000
...................................................................................................................................................AGGGAATAGTTGCTGTGCTGTAT.....................................................................................................................................................23113.0013000000010000000000000000000000000000000000000000000000000000000000000000000000000500010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006000000000000000000000000000000000000000000
droSim2
CATC---------AA-GGAAAATGAAA---------------------------------------GCCA-AGTTGGCAGCTTACT-AA--------------------------------ACTT-A-ATCACAGCCTTTAAAGTAGAGGGAATAGTTGCTGTGCTGTAAGTTTATAT-ACCGTATCTATATCACAGTGGCTGTTCTTTTTGTACCTAAAG-GCATTTTACATCATTA-TT-------------TAA--------TTT-----AC-TT--T--------------------------TTT------TTTSizeHit CountTotal NormTotalM023

Head		M024

Male-body		M025

Embryo		M053

Female-body		O001

Testis		O002

Head		SRR553485

Ovary		SRR553486

Ovary		SRR553487

Ovary		SRR553488

Ovary		SRR618934

Ovary		V044

Embryo		SRR902008

Ovary		SRR902009

Testis		SRR1275487

Male larvae		SRR1275485

Male prepupae		SRR1275483

Male prepupae
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTT............................................................................................................223816.00244800797972722282537553601315000
...................................................................................................................................................AGGGAATAGTTGCTGTGCTGTA......................................................................................................................................................221453.0045312421000303801500000
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTTT.............................................................................................................213162.6748810811199451247312154104000
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTG...........................................................................................................23266.0013200851024018751000000
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTT...............................................................................................................19361.3318400212713562641000000
...................................................................................................................................................AGGGAATAGTTGCTGTGCTGTAA.....................................................................................................................................................23160.0060005700000101100000
...................................................................................................................................................AGGGAATAGTTGCTGTGCTG........................................................................................................................................................20159.0059005400000000500000
...................................................................................................................................................AGGGAATAGTTGCTGTGCTGT.......................................................................................................................................................21151.0051004000000710300000
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTA...........................................................................................................23350.671520001009061000000000
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTT..............................................................................................................20350.671520033123571614952001000
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTAA..........................................................................................................24343.331300000007852000000000
.............................................................................................................................................................................................TATCACAGTGGCTGTTCT................................................................................................................18339.001170000610514001000000
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTGT..........................................................................................................24138.00380021200128130000000
...................................................................................................................................................AGGGAATAGTTGCTGTGC..........................................................................................................................................................18120.0020002000000000000000
....................................................................................................................................................................................................GTGGCTGTTCTTTTT............................................................................................................15318.67560000000027281000000
..............................................................................................................................................................................................ATCACAGTGGCTGTTCTTTTT............................................................................................................21318.3355000550000000000000
....................................................................................................................................................GGGAATAGTTGCTGTGCTGTA......................................................................................................................................................21116.0016001500000000100000
.............................................................................................................................................................................................TATCACAGTGGCTGT...................................................................................................................15315.00450000000012302010000
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTAA...........................................................................................................23313.33400000002119000000000
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTAAA..........................................................................................................24312.67380000002117000000000
...................................................................................................................................................AGGGAATAGTTGCTGTGCTGTAAA....................................................................................................................................................24111.0011001000000000100000
...................................................................................................................................................AGGGAATAGTTGCTGTGCTGG.......................................................................................................................................................21110.0010001000000000000000
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTA............................................................................................................2237.3322000000128101000000
...................................................................................................................................................AGGGAATAGTTGCTGTGCTGC.......................................................................................................................................................2117.00700700000000000000
....................................................................................................................................................................................................GTGGCTGTTCTTTTTGT..........................................................................................................1716.00600000000330000000
......................................................................................................................................................GAATAGTTGCTGTGCTGTA......................................................................................................................................................1915.00500500000000000000
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTGTAA........................................................................................................2613.00300000021000000000
...................................................................................................................................................AGGGAATAGTTGCTGTGCTGTT......................................................................................................................................................2213.00300300000000000000
...................................................................................................................................................AGGGAATAGTTGCTGTGCTGTAC.....................................................................................................................................................2313.00300300000000000000
..............................................................................................................................................................................................ATCACAGTGGCTGTTCTTTT.............................................................................................................2032.67800053000000000000
.............................................................................................................................................................................................TATCACAGTGGCTGTT..................................................................................................................1632.67800000010052000000
..............................................................................................................................................................................................ATCACAGTGGCTGTTCTTTTTG...........................................................................................................2222.50500040001000000000
...................................................................................................................................................AGGGAATAGTTGCTGTGG..........................................................................................................................................................1812.00200200000000000000
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTGTA.........................................................................................................2512.00200000011000000000
...............................................................................................................................................................................................TCACAGTGGCTGTTCTTTTT............................................................................................................2031.33400030010000000000
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTTA.............................................................................................................2131.33400000022000000000
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTGTT.........................................................................................................2521.00200000020000000000
..............................................................................................................................................................................................ATCACAGTGGCTGTTCTTTTTGT..........................................................................................................2311.00100010000000000000
....................................................................................................................................................GGGAATAGTTGCTGTGCTGTAA.....................................................................................................................................................2211.00100100000000000000
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTGA..........................................................................................................2421.00200000011000000000
....................................................................................................................................................GGGAATAGTTGCTGTGCTG........................................................................................................................................................1911.00100000000000100000
....................................................................................................................................................GGGAATAGTTGCTGTGCTGTT......................................................................................................................................................2111.00100100000000000000
.......................................................................................................................................................................................TATCTATATCACAGTGGCTGTT..................................................................................................................2211.00100100000000000000
...................................................................................................................................................AGGGAATAGTTGCTGTGCT.........................................................................................................................................................1911.00100000000100000000
....................................................................................................................................................................................................GTGGCTGTTCTTTTTG...........................................................................................................1621.00200000000020000000
................................................................................................................................................TAGAGGGAATAGTTGCTGTGCT.........................................................................................................................................................2211.00100000000000100000
...................................................................................................................................................AGGGAATAGTTGCTGTGCTGTG......................................................................................................................................................2211.00100100000000000000
........................................................................................................................................................ATAGTTGCTGTGCTGTAA.....................................................................................................................................................1811.00100100000000000000
.....................................................................................................................................................................................................TGGCTGTTCTTTTTGT..........................................................................................................1621.00200000000020000000
.........................................................................................................................................................................AGTTTATAT-ACCGTATCTA..................................................................................................................................1911.00100000000010000000
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTC............................................................................................................2230.67200010010000000000
.................................................................................................................................................................................................ACAGTGGCTGTTCTTTTT............................................................................................................1830.67200010010000000000
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTC..............................................................................................................2030.67200200000000000000
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTTG.............................................................................................................2130.67200020000000000000
..............................................................................................................................................................................................ATCACAGTGGCTGTTCTTTTTA...........................................................................................................2230.67200000002000000000
droSec2
CATC---------AA-GGAAAATTA-A---------------------------------------GCCA-AGTTGGCAGCTTACT-AA--------------------------------ACTT-A-ATCACAGCCTTTAAAGTAGAGGGAATAGTTGCTGTGCTGTAAGTTAATAT-ACCATATCTATATCACAGTGGCTGTTCTTTTTGTACCTAAAG-GCATTTTACATCATTA-TT-------------TAA--------TTT-----AC--------------------------------TTT------TTTSizeHit CountTotal NormTotalM054

Female-body		V113

Male-body		V114

Embryo		V115

Head
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTT............................................................................................................22327140.338142117131478922772
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTTT.............................................................................................................2138065.33241962271023821138
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTG...........................................................................................................2323579.5071591011697978
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTT..............................................................................................................2031417.004251233419035
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTGT..........................................................................................................2411338.001338390127029
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTT...............................................................................................................193259.677793075719
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTA...........................................................................................................233126.33379203689
.................................................................................................................................................................................................ACAGTGGCTGTTCTTTTT............................................................................................................183112.00336003342
..............................................................................................................................................................................................ATCACAGTGGCTGTTCTTTTT............................................................................................................21392.0027614701281
...................................................................................................................................................AGGGAATAGTTGCTGTGCTGTA......................................................................................................................................................22171.007120690
.............................................................................................................................................................................................TATCACAGTGGCTGTTCT................................................................................................................18367.33202101965
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTGA..........................................................................................................24254.50109101080
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTA............................................................................................................22332.339720941
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTC............................................................................................................22329.008710851
..............................................................................................................................................................................................ATCACAGTGGCTGTTCTTTTTG...........................................................................................................22222.5045160290
...............................................................................................................................................................................................TCACAGTGGCTGTTCTTTTT............................................................................................................20319.6759100481
.................................................................................................................................................................................................ACAGTGGCTGTTCTTTTTG...........................................................................................................19216.503300330
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTAA..........................................................................................................24314.004200411
.................................................................................................................................................................................................ACAGTGGCTGTTCTTTTTGT..........................................................................................................20113.001300130
...................................................................................................................................................AGGGAATAGTTGCTGTGCTG........................................................................................................................................................20112.001210101
..............................................................................................................................................................................................ATCACAGTGGCTGTTCTTTTTGT..........................................................................................................23112.00124080
..............................................................................................................................................................................................ATCACAGTGGCTGTTCTTTT.............................................................................................................20311.3334230110
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTC...........................................................................................................23311.003310320
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTGTT.........................................................................................................25210.002000191
...................................................................................................................................................AGGGAATAGTTGCTGTGCTGT.......................................................................................................................................................2119.0090090
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTG............................................................................................................2237.332220200
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTGTA.........................................................................................................2517.0070061
................................................................................................................................................................................................CACAGTGGCTGTTCTTTTT............................................................................................................1936.331920170
...............................................................................................................................................................................................TCACAGTGGCTGTTCTTTT.............................................................................................................1935.331620140
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTGC..........................................................................................................2425.001000100
...............................................................................................................................................................................................TCACAGTGGCTGTTCTTTTTGT..........................................................................................................2215.0051040
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTTA.............................................................................................................2134.331300130
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTTC.............................................................................................................2133.671100110
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTAA...........................................................................................................2333.331000100
................................................................................................................................................................................................CACAGTGGCTGTTCTTTT.............................................................................................................1832.3371060
..............................................................................................................................................................................................ATCACAGTGGCTGTTCTTT..............................................................................................................1932.3375020
....................................................................................................................................................GGGAATAGTTGCTGTGCTGTA......................................................................................................................................................2112.0020011
...................................................................................................................................................AGGGAATAGTTGCTGTGCT.........................................................................................................................................................1912.0020020
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTTG.............................................................................................................2132.0062040
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTA..............................................................................................................2031.0030030
................................................................................................................................................................................................CACAGTGGCTGTTCTTTTTG...........................................................................................................2021.0021010
.................................................................................................................................................................................................ACAGTGGCTGTTCTTTTTGTA.........................................................................................................2111.0010010
..............................................................................................................................................................................................ATCACAGTGGCTGTTCTTTTTA...........................................................................................................2231.0030030
................................................................................................................................................TAGAGGGAATAGTTGCTGTGC..........................................................................................................................................................2111.0010010
...............................................................................................................................................................................................TCACAGTGGCTGTTCTTTTTG...........................................................................................................2121.0021010
...................................................................................................................................................................................................AGTGGCTGTTCTTTTTGT..........................................................................................................1811.0010001
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTC..............................................................................................................2031.0030021
droYak3
CATC---------AA-GGGAAATGAAA---------------------------------------GCCAAAGTCGGCATCTCACT-AA--------------------------------GTTT-A-ATCACAGCCTTTAACGTAGAGGGAATAGTTGCTGTGCTGTAAGTTAATAA-CAAATATCTATATCACAGTGGCTGTTCTTTTTGTACCTAAAGTGC--CTAACATCATTA-AT--------------AATT-TGT--------TG-CTTT-T---------------------------TTT------GCTSizeHit CountTotal NormTotalM026

Head		M043

Female-body		M056

Embryo		V046

Embryo		V052

Head		V058

Head		V120

Male-body		SRR1275488

Male larvae		SRR1275486

Male prepupae		SRR1275484

Male prepupae		GSM1528802

follicle cells
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTT............................................................................................................22388528.672655860234265335500120000
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTTT.............................................................................................................21315870.00476100634753810080000
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTC............................................................................................................2232566.67770000770000000000
...................................................................................................................................................AGGGAATAGTTGCTGTGCTGTA......................................................................................................................................................2211641.001641101583570000000
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTT..............................................................................................................2031006.673020015300310010000
...................................................................................................................................................AGGGAATAGTTGCTGTGCTGT.......................................................................................................................................................211363.0036300348150000000
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTTC.............................................................................................................213276.008280082800000000
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTG...........................................................................................................232209.004180241600000000
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTC...........................................................................................................233165.004950149400000000
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTC..............................................................................................................203138.334150041500000000
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTGT..........................................................................................................241135.001350113400000000
...................................................................................................................................................AGGGAATAGTTGCTGTGCTGC.......................................................................................................................................................211131.001310013100000000
..............................................................................................................................................................................................ATCACAGTGGCTGTTCTTTTT............................................................................................................21392.002760926700000000
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTA...........................................................................................................23390.332710226900000000
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTT...............................................................................................................19362.001860218400000000
...................................................................................................................................................AGGGAATAGTTGCTGTGCTG........................................................................................................................................................20152.0052004750000000
.................................................................................................................................................................................................ACAGTGGCTGTTCTTTTT............................................................................................................18347.001410114000000000
....................................................................................................................................................GGGAATAGTTGCTGTGCTGTA......................................................................................................................................................21146.0046004240000000
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTA............................................................................................................22331.3394009400000000
...............................................................................................................................................................................................TCACAGTGGCTGTTCTTTTT............................................................................................................20322.3367006700000000
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTGC..........................................................................................................24221.5043004300000000
................................................................................................................................................................................................CACAGTGGCTGTTCTTTTT............................................................................................................19321.0063016200000000
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTTG.............................................................................................................21316.6750005000000000
..............................................................................................................................................................................................ATCACAGTGGCTGTTCTTTT.............................................................................................................20312.6738023600000000
...................................................................................................................................................AGGGAATAGTTGCTGTGCTGTT......................................................................................................................................................22112.0012001020000000
...................................................................................................................................................AGGGAATAGTTGCTGTGCT.........................................................................................................................................................19110.001000910000000
...................................................................................................................................................AGGGAATAGTTGCTGTGCTGTAA.....................................................................................................................................................2319.00900810000000
.............................................................................................................................................................................................TATCACAGTGGCTGTTCT................................................................................................................1837.3322012100000000
...................................................................................................................................................AGGGAATAGTTGCTGTGC..........................................................................................................................................................1817.00700700000000
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTG............................................................................................................2235.6717001700000000
............................................................................................................................................................................................ATATCACAGTGGCTGTTCTTTT.............................................................................................................2235.6717001700000000
...................................................................................................................................................AGGGAATAGTTGCTGTGCTGTC......................................................................................................................................................2215.00500500000000
..............................................................................................................................................................................................ATCACAGTGGCTGTTCTTTTC............................................................................................................2134.6714001400000000
..............................................................................................................................................................................................ATCACAGTGGCTGTTCTTTTTG...........................................................................................................2224.50900900000000
....................................................................................................................................................GGGAATAGTTGCTGTGCTGT.......................................................................................................................................................2014.00400400000000
...................................................................................................................................................AGGGAATAGTTGCTGTGCC.........................................................................................................................................................1913.00300300000000
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTTGC............................................................................................................2233.00900900000000
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTC...............................................................................................................1932.67800800000000
................................................................................................................................................................................................CACAGTGGCTGTTCTTTT.............................................................................................................1832.67800800000000
...............................................................................................................................................................................................TCACAGTGGCTGTTCTTTT.............................................................................................................1932.33701600000000
droEre2
CATC---------AATGGGAAATGAAA---------------------------------------GCCAAAGTTGCCAGCTTACT-TA--------------------------------GCTA-A-ATCGCAGCCTTTAAAGTAGAGGGAATAGTTGCCGTGCTGTAAGTTAATAT-ATCATATCTATATCACAGTGGCTGTTCTTTTTGTACCTAAAGTGC--CTAACATCATCA-TT-------------T-----TGT--------TGC-CTT-A---------------------------TTT------TGGSizeHit CountTotal NormTotalM055

Female-body		M057

Embryo		V060

Head		V040

Embryo		V107

Male-body		V108

Head		GSM1528801

follicle cells
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTT............................................................................................................22310965.6732897490027970056160
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTTT.............................................................................................................2132527.677583713686301510
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTC............................................................................................................223198.00594958500000
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTT..............................................................................................................203195.675877550501240
..............................................................................................................................................................................................ATCACAGTGGCTGTTCTTTTT............................................................................................................213131.673953702500000
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTG...........................................................................................................232114.002284518200100
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTGT..........................................................................................................24182.0082166600000
...................................................................................................................................................AGGGAATAGTTGCCGTGCTGTA......................................................................................................................................................22128.002821808000
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTTC.............................................................................................................21326.007817700000
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTC...........................................................................................................23319.005715600000
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTA...........................................................................................................23318.6756163800020
..............................................................................................................................................................................................ATCACAGTGGCTGTTCTTTT.............................................................................................................20317.3352411100000
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTC..............................................................................................................20316.334904801000
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTT...............................................................................................................19314.3343103001110
...............................................................................................................................................................................................TCACAGTGGCTGTTCTTTTT............................................................................................................20310.673223900000
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTGC..........................................................................................................2425.501101100000
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTA............................................................................................................2235.331661000000
..............................................................................................................................................................................................ATCACAGTGGCTGTTCTTTTTG...........................................................................................................2222.5052300000
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTTG.............................................................................................................2132.3374300000
................................................................................................................................................................................................CACAGTGGCTGTTCTTTTT............................................................................................................1932.0061500000
...............................................................................................................................................................................................TCACAGTGGCTGTTCTTTTTGT..........................................................................................................2212.0021100000
..............................................................................................................................................................................................ATCACAGTGGCTGTTCTTT..............................................................................................................1932.0066000000
...................................................................................................................................................AGGGAATAGTTGCCGTGCTGT.......................................................................................................................................................2112.0020101000
...................................................................................................................................................AGGGAATAGTTGCCGTGCTGC.......................................................................................................................................................2112.0020200000
..............................................................................................................................................................................................ATCACAGTGGCTGTTCTTTTTGT..........................................................................................................2312.0021100000
....................................................................................................................................................GGGAATAGTTGCCGTGCTGTA......................................................................................................................................................2112.0020200000
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTCC..........................................................................................................2431.6750500000
.................................................................................................................................................................................................ACAGTGGCTGTTCTTTTT............................................................................................................1831.3340400000
............................................................................................................................................................................................ATATCACAGTGGCTGTTCTTTTT............................................................................................................2331.3342200000
............................................................................................................................................................................................ATATCACAGTGGCTGTTCTTTT.............................................................................................................2231.3341300000
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTTA.............................................................................................................2131.0030300000
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTTCC............................................................................................................2231.0030300000
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTGTA.........................................................................................................2511.0011000000
.................................................................................................................................................AGAGGGAATAGTTGCCGTGCT.........................................................................................................................................................2111.0010100000
.............................................................................................................................................................................................TATCACAGTGGCTGTTCT................................................................................................................1831.0032100000
....................................................................................................................................................GGGAATAGTTGCCGTGCTGT.......................................................................................................................................................2011.0011000000
...............................................................................................................................................................................................TCACAGTGGCTGTTCTTTT.............................................................................................................1930.6720200000
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTCC...........................................................................................................2330.6720200000
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTG............................................................................................................2230.6722000000
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTAA..........................................................................................................2430.6722000000
................................................................................................................................................................................................CACAGTGGCTGTTCTTTT.............................................................................................................1830.6720200000
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTTACC...........................................................................................................2330.6720200000
..............................................................................................................................................................................................ATCACAGTGGCTGTTCTTTTG............................................................................................................2130.6722000000
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTTGC............................................................................................................2230.3310100000
..............................................................................................................................................................................................ATCACAGTGGCTGTTCTTTTTA...........................................................................................................2230.3311000000
dp5
CAT-------------GGGAAACGAAA-----CGCTCAGCGGTG-------------------------------------------------------------------GA-------G----ACCACACCAGCCTTTGAAGTAGAGAGAATAGTTGCTGTGCTATATGTCCTTCG-ACT--CTATATATCACAGTGGCTGTTCTTTTTGTACCTAAAGTGC--CAAACAGCCAAG-G-------AATCGCGT-----TGTGC--A-G-TG-CTTC-C---------------------------AGT------TACSizeHit CountTotal NormTotalM022

Male-body		M040

Female-body		M059

Embryo		M062

Head		V043

Embryo		V051

Head		V112

Male-body		SRR902010

Ovary		SRR902011

Testis		SRR902012

CNS imaginal disc
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTT............................................................................................................22338201.331146040681510770178307000
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTTT.............................................................................................................2136091.0018273012371700029205000
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTC............................................................................................................2231760.0052800452724000000
...................................................................................................................................................AGAGAATAGTTGCTGTGCTATA......................................................................................................................................................221867.0086705123073900000
...................................................................................................................................................AGAGAATAGTTGCTGTGCTAT.......................................................................................................................................................211486.00486010214026200000
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTT..............................................................................................................203403.001209013410741000000
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTG...........................................................................................................232249.004980794190000000
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTGT..........................................................................................................241242.002420232190000000
..............................................................................................................................................................................................ATCACAGTGGCTGTTCTTTTT............................................................................................................213194.005820505770000000
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTTC.............................................................................................................213169.33508025060000000
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTC...........................................................................................................233159.004770124641000000
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTA...........................................................................................................233100.003000222770001000
...................................................................................................................................................AGAGAATAGTTGCTGTGCTAC.......................................................................................................................................................21170.007000700000000
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTC..............................................................................................................20362.00186001842000000
...................................................................................................................................................AGAGAATAGTTGCTGTGCTATAT.....................................................................................................................................................23151.005100304800000
...................................................................................................................................................AGAGAATAGTTGCTGTGCTA........................................................................................................................................................20150.0050012302600000
..............................................................................................................................................................................................ATCACAGTGGCTGTTCTTTT.............................................................................................................20340.001200106140000000
............................................................................................................................................................................................ATATCACAGTGGCTGTTCTTTT.............................................................................................................22330.339107840000000
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTT...............................................................................................................19327.6783024590000000
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTGC..........................................................................................................24226.505300530000000
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTA............................................................................................................22324.677406680000000
....................................................................................................................................................GAGAATAGTTGCTGTGCTATAT.....................................................................................................................................................22118.001801101600000
...............................................................................................................................................................................................TCACAGTGGCTGTTCTTTTT............................................................................................................20317.0051032190000000
...................................................................................................................................................AGAGAATAGTTGCTGTGCTATT......................................................................................................................................................22114.001400101300000
............................................................................................................................................................................................ATATCACAGTGGCTGTTCTTTTT............................................................................................................23313.674108330000000
....................................................................................................................................................GAGAATAGTTGCTGTGCTAT.......................................................................................................................................................20113.00130150700000
...............................................................................................................................................................................................TCACAGTGGCTGTTCTTTTTGT..........................................................................................................22112.001201110000000
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTCC..........................................................................................................24310.673206260000000
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTG............................................................................................................22310.333109220000000
..............................................................................................................................................................................................ATCACAGTGGCTGTTCTTT..............................................................................................................1938.332502230000000
....................................................................................................................................................GAGAATAGTTGCTGTGCTATA......................................................................................................................................................2118.0080020600000
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTTG.............................................................................................................2138.002401230000000
................................................................................................................................................................................................CACAGTGGCTGTTCTTTTT............................................................................................................1937.6723010130000000
.............................................................................................................................................................................................TATCACAGTGGCTGTTCT................................................................................................................1837.002108130000000
...................................................................................................................................................AGAGAATAGTTGCTGTGCTATC......................................................................................................................................................2217.0070010600000
............................................................................................................................................................................................ATATCACAGTGGCTGTTCTTT..............................................................................................................2135.331600160000000
.................................................................................................................................................................................................ACAGTGGCTGTTCTTTTT............................................................................................................1835.001503120000000
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTGA..........................................................................................................2424.5090090000000
...................................................................................................................................................AGAGAATAGTTGCTGTGCTATAAA....................................................................................................................................................2414.0040010300000
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTAA..........................................................................................................2434.001202100000000
..............................................................................................................................................................................................ATCACAGTGGCTGTTCTTTTTG...........................................................................................................2224.0080710000000
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTGTA.........................................................................................................2513.0030030000000
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTCC...........................................................................................................2333.0090180000000
...................................................................................................................................................AGAGAATAGTTGCTGTGCTATAAAA...................................................................................................................................................2513.0030000300000
...................................................................................................................................................AGAGAATAGTTGCTGTGC..........................................................................................................................................................1813.0030030000000
...................................................................................................................................................AGAGAATAGTTGCTGTGCTATAA.....................................................................................................................................................2313.0030020100000
..............................................................................................................................................................................................ATCACAGTGGCTGTTCTTTTTGT..........................................................................................................2313.0030210000000
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTAA...........................................................................................................2332.0060230001000
...................................................................................................................................................AGAGAATAGTTGCTGTGCTATAC.....................................................................................................................................................2312.0020010100000
...................................................................................................................................................AGAGAATAGTTGCTGTGCTATG......................................................................................................................................................2212.0020010100000
..............................................................................................................................................................................................ATCACAGTGGCTGTTCTTTTC............................................................................................................2132.0060150000000
...................................................................................................................................................AGAGAATAGTTGCTGTGCT.........................................................................................................................................................1912.0020010100000
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTGTC.........................................................................................................2512.0020020000000
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTC...............................................................................................................1931.6750050000000
..............................................................................................................................................................................................ATCACAGTGGCTGTTCTT...............................................................................................................1831.6750500000000
...............................................................................................................................................................................................TCACAGTGGCTGTTCTTTTTG...........................................................................................................2121.5030120000000
..............................................................................................................................................................................................ATCACAGTGGCTGTTCTTTTTC...........................................................................................................2231.3340310000000
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTTCC............................................................................................................2231.3340040000000
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTCCC.........................................................................................................2531.3340040000000
droPer2
CAT-------------GGGAAACGAAA-----CACTCAGCGATG-------------------------------------------------------------------GA-------G----ACCACACCAGCCTTTGAAGTAGAGAGAATAGTTGCTGTGCTATATGTCCTTCG-ACT--CTATATATCACAGTGGCTGTTCTTTTTGTACCTAAAGTGC--CAAACAGCCAAG-G-------AATCGCGT-----TGTGC--A-G-TG-CTTC-C---------------------------AGT------TACSizeHit CountTotal NormTotalM021

Embryo		M042

Female-body		V042

Embryo		V050

Head		V057

Head		V111

Male-body
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTT............................................................................................................223146.00438941300115
...................................................................................................................................................AGAGAATAGTTGCTGTGCTATA......................................................................................................................................................221106.0010610105000
...................................................................................................................................................AGAGAATAGTTGCTGTGCTAT.......................................................................................................................................................21153.00533045032
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTTT.............................................................................................................21325.00758620005
..............................................................................................................................................................................................ATCACAGTGGCTGTTCTTTTT............................................................................................................21314.67440440000
...................................................................................................................................................AGAGAATAGTTGCTGTGCTATAT.....................................................................................................................................................23114.00140014000
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTG...........................................................................................................2325.0010070003
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTT..............................................................................................................2035.0015680001
...................................................................................................................................................AGAGAATAGTTGCTGTGCTA........................................................................................................................................................2015.005203000
....................................................................................................................................................GAGAATAGTTGCTGTGCTAT.......................................................................................................................................................2013.003003000
..............................................................................................................................................................................................ATCACAGTGGCTGTTCTTTT.............................................................................................................2033.009090000
....................................................................................................................................................GAGAATAGTTGCTGTGCTATAT.....................................................................................................................................................2212.002002000
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTGT..........................................................................................................2412.002020000
...................................................................................................................................................AGAGAATAGTTGCTGTGCTAG.......................................................................................................................................................2111.001100000
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTT...............................................................................................................1931.003030000
...................................................................................................................................................AGAGAATAGTTGCTGTGCTATT......................................................................................................................................................2211.001001000
...................................................................................................................................................AGAGAATAGTTGCTGTGCTT........................................................................................................................................................2011.001001000
...................................................................................................................................................AGAGAATAGTTGCTGTGCTATATC....................................................................................................................................................2411.001001000
..............................................................................................................................................................................................ATCACAGTGGCTGTTCTTTTTG...........................................................................................................2221.002020000
...............................................................................................................................................................................................TCACAGTGGCTGTTCTTTTT............................................................................................................2030.672020000
...............................................................................................................................................................................................TCACAGTGGCTGTTCTTTTTGA..........................................................................................................2220.501010000
...............................................................................................................................................................................................TCACAGTGGCTGTTCTTTT.............................................................................................................1930.331010000
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTA............................................................................................................2230.331010000
............................................................................................................................................................................................ATATCACAGTGGCTGTTCTTTT.............................................................................................................2230.331010000
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTG............................................................................................................2230.331010000
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTA...........................................................................................................2330.331010000
................................................................................................................................................................................................CACAGTGGCTGTTCTTTTT............................................................................................................1930.331010000
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTC..............................................................................................................2030.331100000
droWil2
TATC---------AA-CAATATC-C-A---------------------------------------G-CAAAGTTTTCA---------------------------------------AGTGGTTTT-CAACCAGCCTTTAAAGTAGAGAGAATAGTTGCTGTGTTTTATGCCCTTT--TC-AATTTCATATCACAGTGGCTGTTCTTTTTGTGCCTAAAGTGC--CCCACAACAACA-AC-------------AAC--------AAC-----AC-AT--T--------------------------CAA------AATSizeHit CountTotal NormTotalM020

Head		M045

Female-body		V117

Male-body		V118

Embryo		V119

Head
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTT............................................................................................................22335155.671054670180701036555
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTTT.............................................................................................................2138217.002465103441243042
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTT..............................................................................................................2031168.673506059534411
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTA...........................................................................................................2331099.333298010032880
...................................................................................................................................................AGAGAATAGTTGCTGTGTTTTATG....................................................................................................................................................241379.003790003790
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTT...............................................................................................................193320.009600609504
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTAA..........................................................................................................243217.006510506460
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTA............................................................................................................223189.675690405650
.............................................................................................................................................................................................TATCACAGTGGCTGTTCT................................................................................................................183128.333850303820
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTG...........................................................................................................23283.501670601610
..............................................................................................................................................................................................ATCACAGTGGCTGTTCTTTTT............................................................................................................21370.3321101430680
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTAAA.........................................................................................................25346.001380001380
.................................................................................................................................................................................................ACAGTGGCTGTTCTTTTT............................................................................................................18345.001350101340
...................................................................................................................................................AGAGAATAGTTGCTGTGTTTT.......................................................................................................................................................21145.0045000450
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTAA...........................................................................................................23341.671250001250
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTC............................................................................................................22340.331210101200
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTC...........................................................................................................23332.3397000970
...................................................................................................................................................AGAGAATAGTTGCTGTGTTTTATGA...................................................................................................................................................25121.0021000210
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTG............................................................................................................22318.6756000560
..............................................................................................................................................................................................ATCACAGTGGCTGTTCTTTT.............................................................................................................20316.00480310170
...................................................................................................................................................AGAGAATAGTTGCTGTGTTTTAT.....................................................................................................................................................23116.0016000160
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTGT..........................................................................................................24112.001205070
...................................................................................................................................................AGAGAATAGTTGCTGTGTTTTA......................................................................................................................................................22111.0011000110
...............................................................................................................................................................................................TCACAGTGGCTGTTCTTTTT............................................................................................................20310.33310120190
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTTA.............................................................................................................2139.3328010270
............................................................................................................................................................................................ATATCACAGTGGCTGTTCTTTT.............................................................................................................2238.6726000260
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTAAA..........................................................................................................2437.3322000220
...................................................................................................................................................AGAGAATAGTTGCTGTGTTTTATGAA..................................................................................................................................................2617.00700070
................................................................................................................................................................................................CACAGTGGCTGTTCTTTTT............................................................................................................1936.0018000180
............................................................................................................................................................................................ATATCACAGTGGCTGTTCTTT..............................................................................................................2134.6714000140
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTTC.............................................................................................................2134.3313000130
...................................................................................................................................................AGAGAATAGTTGCTGTGTTT........................................................................................................................................................2014.00400040
...................................................................................................................................................AGAGAATAGTTGCTGTGTTTTATA....................................................................................................................................................2414.00400040
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTCC..........................................................................................................2433.6711000110
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTGA..........................................................................................................2423.50700070
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTTAA............................................................................................................2243.2513000130
..............................................................................................................................................................................................ATCACAGTGGCTGTTCTTT..............................................................................................................1932.67807010
.................................................................................................................................................................................................ACAGTGGCTGTTCTTTTTA...........................................................................................................1932.67800080
..............................................................................................................................................................................................ATCACAGTGGCTGTTCTTTTTG...........................................................................................................2222.50500050
.......................................................................................................................................................AATAGTTGCTGTGTTTTATG....................................................................................................................................................2012.00200020
...............................................................................................................................................................................................TCACAGTGGCTGTTCTTTT.............................................................................................................1932.00600060
....................................................................................................................................................GAGAATAGTTGCTGTGTTTTATG....................................................................................................................................................2312.00200020
................................................................................................................................................................................................CACAGTGGCTGTTCTTTT.............................................................................................................1831.67500050
............................................................................................................................................................................................ATATCACAGTGGCTGTTCTTTTT............................................................................................................2331.33402020
............................................................................................................................................................................................ATATCACAGTGGCTGTTCTT...............................................................................................................2031.33400040
...............................................................................................................................................................................................TCACAGTGGCTGTTCTTTTTAA..........................................................................................................2231.33400040
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTAC..........................................................................................................2431.00301020
...............................................................................................................................................................................................TCACAGTGGCTGTTCTTTTTG...........................................................................................................2121.00200020
...................................................................................................................................................AGAGAATAGTTGCTGTGTTTTATT....................................................................................................................................................2411.00100010
...................................................................................................................................................AGAGAATAGTTGCTGTGTTTTATGC...................................................................................................................................................2511.00100010
..............................................................................................................................................................................................ATCACAGTGGCTGTTCTTTTTGT..........................................................................................................2311.00100010
...............................................................................................................................................................................................TCACAGTGGCTGTTCTTTTTGT..........................................................................................................2211.00101000
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTTG.............................................................................................................2131.00300030
...............................................................................................................................................................................................TCACAGTGGCTGTTCTTTTTGTG.........................................................................................................2311.00100010
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTAAC.........................................................................................................2531.00300030
...................................................................................................................................................AGAGAATAGTTGCTGTGTTTTATGAAA.................................................................................................................................................2711.00100010
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTGA...........................................................................................................2330.67200020
.................................................................................................................................................................................................ACAGTGGCTGTTCTTTTA............................................................................................................1830.67200020
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTCC...........................................................................................................2330.67200020
droVir3
CAAC---------AC-CACATAC--GATCTA-T--ATCCATGTCTATATAGACTTAAAACTATATCGCCC-AGTTATCTG------------------------------------------------TTTATAGCCTTTAAAGTAGAGAGAATAGACGCTGTGCTGTATGTTTTGC--GTATGGTCTATATCACAGTGGCTGTTCTTTTTGTACCTGAAGCGC--CGTACAACGTTG-AT-------------TTC--------TT---------------AAATTGTGAAAATTGAAT--AAATATTT------GCTSizeHit CountTotal NormTotalM027

Male-body		M028

Head		M047

Female-body		M061

Embryo		SRR060654

Ovary		SRR060655

Testis		SRR060656

Ovary		SRR060657

Testis		SRR060658

Ovary		SRR060659

Testis		SRR060660

Ovary		SRR060661

Embryo		SRR060662

Embryo		SRR060663

Embryo		SRR060664

Male-body		SRR060665

Female-body		SRR060666

Male-body		SRR060667

Female-body		SRR060668

Male-body		SRR060669

Female-body		SRR060670

Testis		SRR060671

Male-body		SRR060672

Female-body		SRR060673

Ovary		SRR060674

Ovary		SRR060675

Ovary		SRR060676

Ovary		SRR060677

Ovary		SRR060678

Testis		SRR060679

Testis		SRR060680

Testis		SRR060681

Testis		SRR060682

Embryo		SRR060683

Testis		SRR060684

Embryo		SRR060685

Embryo		SRR060686

Embryo		SRR060687

Embryo		SRR060688

Ovary		SRR060689

Testis		SRR1106712

embryo_0-2h		SRR1106713

embryo_0-2h		SRR1106714

embryo_2-4h		SRR1106715

embryo_4-6h		SRR1106716

embryo_4-6h		SRR1106717

embryo_6-8h		SRR1106718

embryo_6-8h		SRR1106719

embryo_8-10h		SRR1106720

embryo_8-10h		SRR1106721

embryo_10-12h		SRR1106722

embryo_10-12h		SRR1106723

embryo_12-14h		SRR1106724

embryo_12-14h		SRR1106725

embryo_14-16h		SRR1106726

embryo_14-16h		SRR1106727

larvae		SRR1106728

larvae		SRR1106729

mixed whole adult body		SRR1106730

embryo_16-30h		V047

Embryo		V053

Head		V116

Male-body		GSM1528803

follicle cells		SRR2096013

Ovary_Strain_9_oxidized		SRR2096014

Ovary_Strain_160_oxidized		SRR2096026

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096038

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096050

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096055

Ovary_Min_43		SRR2096056

Ovary_Min_46		SRR2096057

Ovary_Min_50		SRR2096058

Ovary_Min_98		SRR2096059

Ovary_Min_164		SRR2096060

Ovary_Min_193		SRR2096061

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096072

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096079

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096080

embryo_0-2h from 15to16 day old nondysgenic mothers		SRR2096081

embryo_0-2h from 15to16 day old nondysgenic mothers
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTT............................................................................................................22334949.671048490030299170000000000000000000000000000000000001433193312825233385284224634757247948683020205523572021149061432062301156613991044884415060934242427422502272
...................................................................................................................................................AGAGAATAGACGCTGTGCTGTA......................................................................................................................................................2218730.0087300002390000000012870000000000000000004802583138354004942413529262011996745853003640000020722718592322141305346346276295
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTTT.............................................................................................................2135932.671779800754630000000000000000000000000000000000004141814512435630533860650910478455998076453301979104008216197622010020370688662600610
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTC...........................................................................................................2333316.00994800132000000000000000000000000000000000000001271159533527618240242077764140150644411018770020102435340001012146562221
...................................................................................................................................................AGAGAATAGACGCTGTGCTGT.......................................................................................................................................................2111208.001208000560000000023300000000000000000020141019001155243200252026332231221716141002612000001110580100004759603238
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTGT..........................................................................................................241806.00806000850000000000000000000000000000000000001034342305626522151201212800033000000149761000017249431927
...................................................................................................................................................AGAGAATAGACGCTGTGCTG........................................................................................................................................................201697.0069700070000000000000000000000000000001228001120200146241710217810123000710000046540000003534252218
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTCC..........................................................................................................243570.00171000045100000000000000000000000000000000000001118204955194976180126759060000392000000625010000715453
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTT..............................................................................................................203518.001554006361000000000000000000000000000000000000135111015161836316666384439000199000000273343000000369284137137
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTC............................................................................................................223494.671484000109600000000000000000000000000000000000000041101311918233616281800015100100046900010158906
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTG...........................................................................................................232359.007180001670000000000000000000000000000000000000011511152472715352218151200039000000151398200000664232819
................................................................................................................................................TAGAGAGAATAGACGCTGTGCT.........................................................................................................................................................221292.0029200060000000000000000000000000000000402000053125191613259155111050006200000131300000011242623
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTA...........................................................................................................233179.3353800164000000000000000000000000000000000000001710221517251013134760002200000014191120000005435251824
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTGTC.........................................................................................................251178.0017800013000000000000000000000000000000000000000165162381710187578010900000031200000015300
...................................................................................................................................................AGAGAATAGACGCTGTGCTGTAA.....................................................................................................................................................231176.00176000200000000100000000000000000001012418001092522141411200000021000001126000000222966
...................................................................................................................................................AGAGAATAGACGCTGTGC..........................................................................................................................................................181150.001500003000000000000000000000000000000000000001946474102050000000000000002800000072103
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTCCC.........................................................................................................253126.6738000027000000000000000000000000000000000000000851212442949532731190009200000000500100110000
...................................................................................................................................................AGAGAATAGACGCTGTGCTGTAAA....................................................................................................................................................24178.00780000000000000000000000000000000000012100001124612000000000001000000011200000062521
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTT...............................................................................................................19350.33151001180000000000000000000000000000000000000002221356410994010170010001260000006822110
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTTC.............................................................................................................21335.3310600098000000000000000000000000000000000000000000000001001000510000000000000000000
...............................................................................................................................................................................................TCACAGTGGCTGTTCTTTTTGT..........................................................................................................22133.00330004000000000000000000000000000000000000000010231103110000300000022300000020400
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTAA..........................................................................................................24329.33880001000000000000000000000000000000000000000013244123102000000000052190000011413334
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTCC...........................................................................................................23328.3385001440000000000000000000000000000000000000100011120362330001300000000000000021100
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTA............................................................................................................22326.0078000140000000000000000000000000000000000000001103120510120000000000421300000067924
...................................................................................................................................................AGAGAATAGACGCTGTGCTGTC......................................................................................................................................................22125.0025000000000000000000000000000000000000000000002000000000000000000001011000000110000
.............................................................................................................................................................................................TATCACAGTGGCTGTTCT................................................................................................................18321.0063000500000000000000000000000000000000000000010000142112200020000001013000000102268
.....................................................................................................................................................AGAATAGACGCTGTGCTGTATG....................................................................................................................................................22120.00200000000000000000000000000000000000010000000510001200002000000000000300000030101
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTC..............................................................................................................20317.005100050000000000000000000000000000000000000000000000010000000000000000000000000000
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTG............................................................................................................22316.334900080000000000000000000000000000000000000000220220100210006000000013000000210052
...................................................................................................................................................AGAGAATAGACGCTGTGCTGC.......................................................................................................................................................21116.001600011000000000000000000000000000000000000000310010000000000000000000000000000000
....................................................................................................................................................GAGAATAGACGCTGTGCTGTA......................................................................................................................................................21114.00140000000000000000000000000000000000000000000450000000000000000000000100000010012
...................................................................................................................................................AGAGAATAGACGCTGTGCTGTAT.....................................................................................................................................................23114.00140001000000000000000000000000000000010200000100000101101000110000000000000011100
...................................................................................................................................................AGAGAATAGACGCTGTGCT.........................................................................................................................................................19113.00130001000000000000000000000000000000000100000101010010000000010000000300000011001
...................................................................................................................................................AGAGAATAGACGCTGTGCTGTAAAA...................................................................................................................................................25113.00130001000000000000000000000000000000000000002200000000000000000000010100000020013
................................................................................................................................................TAGAGAGAATAGACGCTGTGC..........................................................................................................................................................21112.00120001000000000000000000000000000000000000000011010010000000100000000300000002010
..............................................................................................................................................................................................ATCACAGTGGCTGTTCTTTTT............................................................................................................21311.333400321000000000000000000000000000000000000000200001010100000200000000100000020000
.................................................................................................................................................AGAGAGAATAGACGCTGTGCTG........................................................................................................................................................22111.00110000000000000000000000000000000000000000002310012100000000000000000100000000000
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTGC..........................................................................................................2429.501900018000000000000000000000000000000000000000000000000000000000000000100000000000
...................................................................................................................................................AGAGAATAGACGCTGTGCTGTT......................................................................................................................................................2219.0090001000000000000000000000000000000000000000100001012000000200000000000000000100
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTCA..........................................................................................................2439.00270003000000000000000000000000000000000000000221112032020000500000000000000001110
...................................................................................................................................................AGAGAATAGACGCTGTGCTGTAG.....................................................................................................................................................2318.0080000000000000000000000000000000000000000000010200000000000100000000300000000001
................................................................................................................................................................................................CACAGTGGCTGTTCTTTTTGTACC.......................................................................................................2418.0080000000000000000000000000000000000000000001101000000000000000000000300000000002
...............................................................................................................................................................................................TCACAGTGGCTGTTCTTTTTGTC.........................................................................................................2318.0080000000000000000000000000000000000000000000002011010100000200000000000000000000
............................................................................................................................................................................................ATATCACAGTGGCTGTTCTTTTT............................................................................................................2337.67230010000000000000000000000000000000000000010031213121003010100000000100000000100
................................................................................................................................................TAGAGAGAATAGACGCTGTGCTC........................................................................................................................................................2317.0070000000000000000000000000000000000000000000112011100000000000000000000000000000
.................................................................................................................................................................................................ACAGTGGCTGTTCTTTTT............................................................................................................1837.00210006000000000000000000000000000000000000000010000010010000010000011400000031010
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTGA..........................................................................................................2426.50130002000000000000000000000000000000000000000000001000000000000000002400000003010
....................................................................................................................................................GAGAATAGACGCTGTGCTGT.......................................................................................................................................................2016.0060000000000000000000000000000000000000000000200010000000000300000000000000000000
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTGTCA........................................................................................................2616.0060000000000000000000000000000000000000000000101002200000000000000000000000000000
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTCCC..........................................................................................................2436.00180008000000000000000000000000000000000000000000200011101000100000000000003000000
.............................................................................................................................................................................................TATCACAGTGGCTGTTC.................................................................................................................1735.67170000000000000000000000000000000000000000000000000010001000000000002400000030222
..............................................................................................................................................................................................ATCACAGTGGCTGTTCTTTTTG...........................................................................................................2225.50110006000000000000000000000000000000000000000000010000000000000000000300000010000
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTAA...........................................................................................................2335.33160002000000000000000000000000000000000000000001000010010000000000031100000102021
...........................................................................................................................................................................................TATATCACAGTGGCTGTTCTTT..............................................................................................................2225.00100001000000000000000000000000000000000000000110000000100000000000000200000011200
..............................................................................................................................................................................................ATCACAGTGGCTGTTCTTTTTGT..........................................................................................................2315.0050001000000000000000000000000000000000000000000000001000000000000000100000010001
...................................................................................................................................................AGAGAATAGACGCTGTGCTGG.......................................................................................................................................................2115.0050000000000000000000000000000000000000000000020000020000000000000000100000000000
...............................................................................................................................................................................................TCACAGTGGCTGTTCTTTTT............................................................................................................2035.00150007000000000000000000000000000000000000000010100000000000000000000100000011102
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTGTT.........................................................................................................2524.5090001000000000000000000000000000000000000000102002100100000100000000000000000000
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTAAA..........................................................................................................2434.00120000000000000000000000000000000000000000000000000000000000000000033000000110121
......................................................................................................................................................GAATAGACGCTGTGCTGTA......................................................................................................................................................1914.0040000000000000000000000000000000000000000000100000000000000000000010100000010000
.........................................................................................................................................................................TGTTTTGC--GTATGGTCTA..................................................................................................................................1814.0040000000000000200000000000000000000000000000000000000000000000000000100000010000
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTGTCT........................................................................................................2624.0080000000000000000000000000000000000000000000002001101101000100000000000000000000
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTAC..........................................................................................................2433.67110000000000000000000000000000000000000000000031100012001000200000000000000000000
..............................................................................................................................................................................................ATCACAGTGGCTGTTCTTTT.............................................................................................................2033.0090005000000000000000000000000000000000000000010000000000000100000000000000001001
.................................................................................................................................................AGAGAGAATAGACGCTGTGCT.........................................................................................................................................................2113.0030000000000000000000000000000000000000000000000100000000000100000000000000000100
................................................................................................................................................TAGAGAGAATAGACGCTGTGCG.........................................................................................................................................................2213.0030000000000000000000000000000000000000000000000000001010000000000000000000001000
...................................................................................................................................................AGAGAATAGACGCTGTGCTGTATG....................................................................................................................................................2413.0030000000000000000000000000000000000000000000010000000000000000000000100000000100
.....................................................................................................................................................AGAATAGACGCTGTGCTGTA......................................................................................................................................................2013.0030000000000000000000000000000000000010100000000000000000000010000000000000000000
..............................................................................................................................................................................................ATCACAGTGGCTGTTCTTTTTC...........................................................................................................2233.0090008000000000000000000000000000000000000000000000000001000000000000000000000000
...................................................................................................................................................AGAGAATAGACGCTGTGCTGTG......................................................................................................................................................2212.0020000000000000000000000000000000000000000000010000000000000000000000000000001000
droMoj3
CAAT---------AT-GAATGT--GAA-----TATTTATAAGTGTATAT--------------------ATATTTATTTC------------------TC-----------------TAGTGT-----TTTTTCGCCTTTAAAGTAGAGAGAATAGATGCTGTGA-----GTATATCT-GTTGCATTTATATCACAGTGGCTGTTCTTTTTGTACCTAAATGGC--CAGACAGCATTA-TT-------------T----------------------TTCGCCAATTGCCAAATATAAAGTGAAACATGAGCACAGTATSizeHit CountTotal NormTotalM046

Female-body		V041

Embryo		V049

Head		V056

Head		M060

Embryo		V110

Male-body
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTT............................................................................................................223175659.67526979301005269462
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTTT.............................................................................................................21371420.67214262141002142425
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTC...........................................................................................................2339565.33286966000286900
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTT..............................................................................................................2035461.67163853000163802
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTC............................................................................................................2234979.00149371000149360
...................................................................................................................................................AGAGAATAGATGCTGTGA-----GTAT.................................................................................................................................................2211583.00158313550012261
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTTC.............................................................................................................2131153.673461000034610
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTCC..........................................................................................................243749.332248000022480
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTG...........................................................................................................232623.501247100012442
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTC..............................................................................................................203612.001836000018360
..............................................................................................................................................................................................ATCACAGTGGCTGTTCTTTTT............................................................................................................213393.671181200011790
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTT...............................................................................................................193276.6783001008281
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTA...........................................................................................................233230.3369100006910
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTGT..........................................................................................................241191.0019100001910
...................................................................................................................................................AGAGAATAGATGCTGTGA-----GTATA................................................................................................................................................231164.00164012001520
...................................................................................................................................................AGAGAATAGATGCTGTGA-----GTAC.................................................................................................................................................221147.0014702001450
..............................................................................................................................................................................................ATCACAGTGGCTGTTCTTTT.............................................................................................................203132.3339710003960
...................................................................................................................................................AGAGAATAGATGCTGTGA-----GTA..................................................................................................................................................211126.0012604001220
..............................................................................................................................................................................................ATCACAGTGGCTGTTCTTTTTG...........................................................................................................22295.5019100001910
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTA............................................................................................................22389.6726900002690
...............................................................................................................................................................................................TCACAGTGGCTGTTCTTTTT............................................................................................................20389.6726900002690
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTCC...........................................................................................................23368.6720600002060
................................................................................................................................................................................................CACAGTGGCTGTTCTTTTT............................................................................................................19365.3319600001960
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTCCC.........................................................................................................25353.6716100001610
.................................................................................................................................................................................................ACAGTGGCTGTTCTTTTT............................................................................................................18347.6714300001430
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTTG.............................................................................................................21346.6714000001400
...................................................................................................................................................AGAGAATAGATGCTGTGA-----GT...................................................................................................................................................20136.00360400320
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTGC..........................................................................................................24234.50690000690
...............................................................................................................................................................................................TCACAGTGGCTGTTCTTTTTGT..........................................................................................................22133.00330000330
............................................................................................................................................................................................ATATCACAGTGGCTGTTCTTT..............................................................................................................21331.33940000940
...............................................................................................................................................................................................TCACAGTGGCTGTTCTTTT.............................................................................................................19331.33940000940
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTG............................................................................................................22328.67860000860
................................................................................................................................................................................................CACAGTGGCTGTTCTTTT.............................................................................................................18328.33850000850
.............................................................................................................................................................................................TATCACAGTGGCTGTTCT................................................................................................................18326.33790000790
...................................................................................................................................................AGAGAATAGATGCTGTGA-----GC...................................................................................................................................................20118.00180000180
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTGTC.........................................................................................................25118.00180000180
...................................................................................................................................................AGAGAATAGATGCTGTGA-----GTATT................................................................................................................................................23117.00170400130
..............................................................................................................................................................................................ATCACAGTGGCTGTTCTTTTTC...........................................................................................................22316.00480000480
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTC...............................................................................................................19314.67440000440
..............................................................................................................................................................................................ATCACAGTGGCTGTTCTTT..............................................................................................................19311.00330000330
....................................................................................................................................................GAGAATAGATGCTGTGA-----GTAT.................................................................................................................................................21111.00110100100
...............................................................................................................................................................................................TCACAGTGGCTGTTCTTTTTG...........................................................................................................21210.50210000210
............................................................................................................................................................................................ATATCACAGTGGCTGTTCTTTT.............................................................................................................22310.00300000300
................................................................................................................................................................................................CACAGTGGCTGTTCTTTTTC...........................................................................................................2039.33280000280
...............................................................................................................................................................................................TCACAGTGGCTGTTCTTTTTGC..........................................................................................................2229.00180000180
droGri2
--------------------------------------------------------------------------------------------------------------------------------------GCCTTTAATGTAAAGAGAATAGATGCTGTGCTGTATGTTGAAC--GTATTGTCTATATCACAGTGGCTGTTCTTTTTGTACCAAAAGTGC--CGTACAACAAAA-TG---------------------AGT--A-A-TG-T--------------------------------TAT------CAASizeHit CountTotal NormTotalM041

Female-body		V109

Male-body
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTT............................................................................................................2262.5015105
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTTT.............................................................................................................2161.831129
.............................................................................................................................................................................................TATCACAGTGGCTGTTCTTT..............................................................................................................2060.33202

Generated: 10/20/2015 at 07:42 PM