ID:

dan-mir-31b

 Coordinate:

scaffold_13047:712447-712541 -

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

intergenic

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-33.2

Flybase annnotation

pre_miRNA [Dana\mir-31b-RM]; miRNA [Dana\miR-31b-RA]

No Repeatable elements found

Sense Strand Reads

AGAAAGTGCCCGTCCCAGGACGGGACAGCATCCTCGAAGACAAATAATGAATTTGGCAAGATGTCGGAATAGCTGAGAGCACAGAGGATCGAGCGAGTCATCGACCGAGACGAATTCCAAAGCGGCTATGCCTCATCTAGTCAATTACATTACTTTGACACTTTCCACGAGGGATGCTGCAGTGCCTAGTTCCAT

**************************************..(((((((((...(((((.(((((..((.(((((((.............(((..(((....)))..)))..............))))))).)).))))).)))))...))))).))))...*********************************** 		Read size # Mismatch Hit Count Total Norm Total V105

male body		 M044

female body

 M058

embryo

 V055

head

 V106

head

 V039

embryo
.....................................................TGGCAAGATGTCGGAATAGCTGA....................................................................................................................... 23 0 1 2162.00 2162 1091 543 226 109 153 40
.....................................................TGGCAAGATGTCGGAATAGCT......................................................................................................................... 21 0 1 1778.00 1778 1070 596 18 59 33 2
.....................................................TGGCAAGATGTCGGAATAGCTG........................................................................................................................ 22 0 1 1458.00 1458 544 756 58 72 24 4
.....................................................TGGCAAGATGTCGGAATAGC.......................................................................................................................... 20 0 1 410.00 410 256 102 35 11 5 1
.....................................................TGGCAAGATGTCGGAATAGCTT........................................................................................................................ 22 1 1 207.00 207 114 79 1 7 6 0
...................................................TTTGGCAAGATGTCGGAATAGCT......................................................................................................................... 23 0 1 126.00 126 52 30 28 11 2 3
.....................................................TGGCAAGATGTCGGAATAGCTGAT...................................................................................................................... 24 1 1 109.00 109 65 30 2 6 6 0
.....................................................TGGCAAGATGTCGGAATAGCTGT....................................................................................................................... 23 1 1 105.00 105 57 35 0 13 0 0
...................................................TTTGGCAAGATGTCGGAATAGC.......................................................................................................................... 22 0 1 75.00 75 58 7 2 6 2 0
......................................................GGCAAGATGTCGGAATAGCTG........................................................................................................................ 21 0 1 72.00 72 2 70 0 0 0 0
.....................................................TGGCAAGATGTCGGAATAG........................................................................................................................... 19 0 1 61.00 61 34 25 0 0 2 0
.....................................................TGGCAAGATGTCGGCATAGCTGAAA..................................................................................................................... 25 2 2 52.00 104 47 22 4 11 19 1
......................................................GGCAAGATGTCGGAATAGCTGA....................................................................................................................... 22 0 1 52.00 52 0 52 0 0 0 0
......................................................GGCAAGATGTCGGAATAGCT......................................................................................................................... 20 0 1 51.00 51 0 51 0 0 0 0
.....................................................TGGCAAGATGTCGGAATAGCTGATT..................................................................................................................... 25 2 1 49.00 49 37 4 0 1 6 1
.....................................................TTGCAAGATGTCGGAATAGCTGA....................................................................................................................... 23 1 1 47.00 47 2 1 43 1 0 0
.....................................................TGGCAAGATGTCGGAATAGATGA....................................................................................................................... 23 1 1 39.00 39 21 0 0 0 17 1
.....................................................TGGAAAGATGTCGGAATAGCTGA....................................................................................................................... 23 1 1 35.00 35 19 0 0 2 14 0
.....................................................TGGCAAGATGTCGGAATAGCTGAA...................................................................................................................... 24 1 1 35.00 35 15 11 4 2 2 1
.....................................................TGGCAAGATGTCGGCATAGCTGAG...................................................................................................................... 24 1 2 33.50 67 38 19 0 6 4 0
.....................................................TGGCAAGAGGTCGGAATAGCTG........................................................................................................................ 22 1 1 31.00 31 0 31 0 0 0 0
.....................................................TGGCAAGATGTCGGAATAGCTGTT...................................................................................................................... 24 2 1 30.00 30 10 15 0 3 2 0
.....................................................TGGCAAGATGTCGGCATAGCTGATA..................................................................................................................... 25 2 2 29.50 59 29 14 0 3 13 0
.....................................................TGGCAAGATGTCGGTATAGCTGA....................................................................................................................... 23 1 2 27.00 54 31 1 1 6 14 1
.....................................................TGGCAAGATGTCGGAATAGCTTT....................................................................................................................... 23 2 1 26.00 26 15 10 0 0 1 0
.....................................................TGGCAAGAGGTCGGAATAGCT......................................................................................................................... 21 1 1 25.00 25 0 25 0 0 0 0
.....................................................TGGCAAGAGGTCGGAATAGCTGA....................................................................................................................... 23 1 1 24.00 24 1 23 0 0 0 0
.....................................................TGGCAAGAAGTCGGAATAGCT......................................................................................................................... 21 1 1 17.00 17 3 14 0 0 0 0
....................................................TTGGCAAGATGTCGGAATAGCT......................................................................................................................... 22 0 1 17.00 17 8 9 0 0 0 0
.....................................................TGGCAAGATGTCGGAATAGCAGA....................................................................................................................... 23 1 1 17.00 17 16 0 0 0 1 0
.....................................................TTGCAAGATGTCGGAATAGCTG........................................................................................................................ 22 1 1 16.00 16 0 0 15 0 1 0
.....................................................TTGCAAGATGTCGGAATAGCT......................................................................................................................... 21 1 1 15.00 15 5 1 9 0 0 0
.....................................................TGGCAAGATGTCGGAATAGCCGA....................................................................................................................... 23 1 1 15.00 15 10 2 1 1 1 0
.....................................................TGGCAAGATGTCGGAATATCT......................................................................................................................... 21 1 1 14.00 14 12 1 0 1 0 0
...................................................TTTGGCAAGATGTCGGAATAG........................................................................................................................... 21 0 1 13.00 13 4 9 0 0 0 0
.....................................................TGGCAAGAAGTCGGAATAGCTG........................................................................................................................ 22 1 1 13.00 13 0 13 0 0 0 0
.....................................................TGGCAAGATGTCGGAATAGCC......................................................................................................................... 21 1 1 13.00 13 5 0 8 0 0 0
.....................................................TGGCAAGATGTCGGAATAGCA......................................................................................................................... 21 1 1 13.00 13 10 2 0 0 1 0
.....................................................TGGCAAGATGTCGGAATAGCG......................................................................................................................... 21 1 1 13.00 13 13 0 0 0 0 0
.....................................................TGGCAAGATGTCGGAATAGCTGTTT..................................................................................................................... 25 3 1 12.00 12 9 3 0 0 0 0
......................................................GGCAAGATGTCGGAATAGC.......................................................................................................................... 19 0 1 12.00 12 0 12 0 0 0 0
...................................................TTTGGCAAGATGTCGGAATAGCTT........................................................................................................................ 24 1 1 12.00 12 4 6 0 2 0 0
.....................................................TGGTAAGATGTCGGAATAGCTGA....................................................................................................................... 23 1 1 12.00 12 1 0 11 0 0 0
.....................................................TTGCAAGATGTCGGAATAGC.......................................................................................................................... 20 1 1 11.00 11 0 0 11 0 0 0
.....................................................TGGCAAGATGTCTGAATAGCT......................................................................................................................... 21 1 1 10.00 10 9 0 0 0 1 0
.....................................................TGCCAAGATGTCGGAATAGCTGA....................................................................................................................... 23 1 1 10.00 10 0 0 10 0 0 0
.......................................................GCAAGATGTCGGAATAGCTG........................................................................................................................ 20 0 1 10.00 10 0 10 0 0 0 0
....................................................TTGGCAAGATGTCGGAATAGC.......................................................................................................................... 21 0 1 10.00 10 6 3 0 0 1 0
....................................................TTGGCAAGATGTCGGAATAGCTG........................................................................................................................ 23 0 1 10.00 10 6 2 1 1 0 0
.....................................................TGGAAAGATGTCGGAATAGCT......................................................................................................................... 21 1 1 10.00 10 10 0 0 0 0 0
.....................................................TGGCAAGATGTCGGCATAGCTGAGT..................................................................................................................... 25 2 2 9.50 19 10 5 0 1 3 0
.....................................................TGGCAAGATGACGGAATAGCTGA....................................................................................................................... 23 1 1 9.00 9 7 0 0 2 0 0
...........................................................................................................................GGCTATGCCTCATCTAGTCAAT.................................................. 22 0 1 9.00 9 0 7 2 0 0 0
.....................................................TGGCAAGATGTAGGAATAGCT......................................................................................................................... 21 1 1 9.00 9 8 0 0 0 1 0
.....................................................TGGCAAGATGTCGGAATATCTGA....................................................................................................................... 23 1 1 9.00 9 8 0 1 0 0 0
.....................................................TGGCAAGATGTCGGAATAGCAG........................................................................................................................ 22 1 1 8.00 8 8 0 0 0 0 0
.....................................................TGGCAAGATGTCGGAATAGAT......................................................................................................................... 21 1 1 8.00 8 7 0 0 1 0 0
.....................................................TGGCAAGATGTCCGAATAGCT......................................................................................................................... 21 1 1 8.00 8 8 0 0 0 0 0
.....................................................TGGCAAGACGTCGGAATAGCT......................................................................................................................... 21 1 1 8.00 8 3 5 0 0 0 0
......................................................GGCAAGATGTCGGAATAGCTGAT...................................................................................................................... 23 1 1 8.00 8 0 8 0 0 0 0
.....................................................TGGCAAGATGTAGGAATAGCTGA....................................................................................................................... 23 1 1 7.00 7 6 0 0 0 1 0
.....................................................TGGCAAGATGTCGGAATAGATG........................................................................................................................ 22 1 1 7.00 7 4 0 0 0 3 0
.....................................................TGGCAAGATGTCGGAATAGCTTTT...................................................................................................................... 24 3 1 7.00 7 4 3 0 0 0 0
......................................................GGCAAGATGTCGGAATAGCTT........................................................................................................................ 21 1 1 7.00 7 0 7 0 0 0 0
.....................................................TAGCAAGATGTCGGAATAGCT......................................................................................................................... 21 1 1 7.00 7 5 1 0 1 0 0
.....................................................TGGCAAGATGTCGGAATAGCGGA....................................................................................................................... 23 1 1 7.00 7 6 0 0 1 0 0
...................................................TTTGGCAAGATGTCGGAATAGCC......................................................................................................................... 23 1 1 7.00 7 0 0 7 0 0 0
.....................................................TGGCAAGATGTCAGAATAGCTGA....................................................................................................................... 23 1 1 7.00 7 6 0 0 1 0 0
.....................................................TGGCAAGAAGTCGGAATAGCTGA....................................................................................................................... 23 1 1 7.00 7 0 7 0 0 0 0
.....................................................TGTCAAGATGTCGGAATAGCTGA....................................................................................................................... 23 1 1 6.00 6 4 0 0 0 2 0
.....................................................TGGAAAGATGTCGGAATAGCTG........................................................................................................................ 22 1 1 6.00 6 3 0 0 0 3 0
.....................................................TGGCAAGATGTCGGAATAGCTGG....................................................................................................................... 23 1 1 6.00 6 2 1 0 0 0 3
.....................................................TGGCAAGATGTCGGGATAGCTGA....................................................................................................................... 23 1 2 6.00 12 5 0 1 2 3 1
.....................................................TGGTAAGATGTCGGAATAGCT......................................................................................................................... 21 1 1 6.00 6 1 0 3 2 0 0
.....................................................TGGCAAGACGTCGGAATAGCTG........................................................................................................................ 22 1 1 6.00 6 0 6 0 0 0 0
.......................................................GCAAGATGTCGGAATAGCTGA....................................................................................................................... 21 0 1 6.00 6 1 5 0 0 0 0
.....................................................TGGCAAGATGTCGTAATAGCT......................................................................................................................... 21 1 1 5.00 5 3 0 0 0 2 0
.....................................................TGGCAAGATGTAGGAATAGCTG........................................................................................................................ 22 1 1 5.00 5 4 1 0 0 0 0
.....................................................TGTCAAGATGTCGGAATAGCT......................................................................................................................... 21 1 1 5.00 5 4 1 0 0 0 0
.....................................................TGGCAAGATGACGGAATAGCT......................................................................................................................... 21 1 1 5.00 5 3 0 0 2 0 0
.....................................................TGGCAAGATGTCGGAATAGCTGC....................................................................................................................... 23 1 1 5.00 5 1 1 2 1 0 0
.....................................................CGGCAAGATGTCGGAATAGCTGA....................................................................................................................... 23 1 1 5.00 5 1 2 1 1 0 0
.....................................................TGGCAAGATGACGGAATAGCTG........................................................................................................................ 22 1 1 5.00 5 3 0 0 2 0 0
.....................................................TGGCAAGATGTCGGCATAGCTGATAA.................................................................................................................... 26 3 2 5.00 10 5 2 0 0 3 0
.....................................................TGGCAAGATGTCGGAATAGCTGATTT.................................................................................................................... 26 3 2 4.50 9 7 2 0 0 0 0
.....................................................TGGCAAGATGTCGGACTAGCTGA....................................................................................................................... 23 1 1 4.00 4 4 0 0 0 0 0
.....................................................TGGCAAGATGTCGGAATGGCTG........................................................................................................................ 22 1 1 4.00 4 3 0 0 0 0 1
...................................................TTTGGCAAGATGTCGGAAT............................................................................................................................. 19 0 1 4.00 4 3 1 0 0 0 0
......................................................TGCAAGATGTCGGAATAGCTGA....................................................................................................................... 22 1 1 4.00 4 2 1 1 0 0 0
.....................................................TGGTAAGATGTCGGAATAGCTG........................................................................................................................ 22 1 1 4.00 4 0 0 4 0 0 0
.....................................................TGGCAAGATGTCGGAATATC.......................................................................................................................... 20 1 1 4.00 4 2 0 0 1 1 0
.....................................................TGGCAAGATGTCGGAATT............................................................................................................................ 18 1 1 4.00 4 0 4 0 0 0 0
........................................................CAAGATGTCGGAATAGCT......................................................................................................................... 18 0 1 4.00 4 0 2 0 0 2 0
......................................................GGCAAGATGTCGGCATAGCTGAAA..................................................................................................................... 24 2 2 4.00 8 0 8 0 0 0 0
.....................................................TGGCAAGATGTCGGAATAGCGG........................................................................................................................ 22 1 1 4.00 4 2 1 0 1 0 0
.....................................................TGGCAATATGTCGGAATAGCTGA....................................................................................................................... 23 1 1 4.00 4 3 1 0 0 0 0
.....................................................TCGCAAGATGTCGGAATAGCTGA....................................................................................................................... 23 1 1 4.00 4 0 0 4 0 0 0
.....................................................TGGCAAGATGCCGGAATAGCTGA....................................................................................................................... 23 1 1 4.00 4 1 0 0 3 0 0
.....................................................TGGCAAGATGTCCGAATAGCTT........................................................................................................................ 22 2 1 4.00 4 3 0 0 0 1 0
.....................................................TGGCAAGATGTTGGAATAGCT......................................................................................................................... 21 1 1 4.00 4 4 0 0 0 0 0
.....................................................TGGAAAGATGTCGGAATAGATGA....................................................................................................................... 23 2 1 4.00 4 4 0 0 0 0 0
.....................................................TGGCAAGATGTCCGAATAGCTGA....................................................................................................................... 23 1 1 4.00 4 4 0 0 0 0 0
.....................................................TGGCGAGATGTCGGAATAGCT......................................................................................................................... 21 1 1 4.00 4 2 1 1 0 0 0
.....................................................TGGCAAGATGTCAGAATAGCT......................................................................................................................... 21 1 1 4.00 4 4 0 0 0 0 0
.....................................................TGGCAAGATGTCGTAATAGCTG........................................................................................................................ 22 1 1 4.00 4 3 1 0 0 0 0
.....................................................TGGCAAGATGTCGGAATATCTG........................................................................................................................ 22 1 1 4.00 4 3 1 0 0 0 0
.....................................................TGGCAAGATGTCAGAATAGCTG........................................................................................................................ 22 1 1 4.00 4 4 0 0 0 0 0
......................................................GGCAAGATGTCGGAATAGCTGT....................................................................................................................... 22 1 1 4.00 4 0 4 0 0 0 0
.....................................................TGGCAAGATGGCGGAATAGCTGA....................................................................................................................... 23 1 1 4.00 4 3 0 0 1 0 0
.....................................................TGGCAAGAAGTCGGAATAGCTT........................................................................................................................ 22 2 1 4.00 4 0 4 0 0 0 0
.....................................................TGGCAAGATGTCGGCATAGCTTTG...................................................................................................................... 24 3 2 3.50 7 2 4 0 1 0 0
.....................................................TGGCAAGATGTCGGCATAGCTGATTG.................................................................................................................... 26 3 2 3.50 7 3 4 0 0 0 0
.....................................................TGGCAAGATGTTGGAATAGCTGA....................................................................................................................... 23 1 1 3.00 3 2 0 0 1 0 0
.....................................................TGGCAAGATGGCGGAATAGCTGAT...................................................................................................................... 24 2 1 3.00 3 2 0 0 1 0 0
.....................................................TGGCAAGGTGTCGGAATAGCTGA....................................................................................................................... 23 1 1 3.00 3 1 1 0 1 0 0
.....................................................TGGCAAGATGTTGGAATAGCTG........................................................................................................................ 22 1 1 3.00 3 3 0 0 0 0 0
.....................................................TGGCAAGATGTCGGAATAGCCG........................................................................................................................ 22 1 1 3.00 3 2 1 0 0 0 0
.....................................................TGGCAAGATGTCGGAATAGCTGAAT..................................................................................................................... 25 2 1 3.00 3 3 0 0 0 0 0
.....................................................TGCCAAGATGTCGGAATAGCTG........................................................................................................................ 22 1 1 3.00 3 0 0 3 0 0 0
.....................................................TAGCAAGATGTCGGAATAGCTGA....................................................................................................................... 23 1 1 3.00 3 3 0 0 0 0 0
.....................................................TGGCAAGATGTCGGAATAGCAT........................................................................................................................ 22 2 1 3.00 3 3 0 0 0 0 0
.....................................................TGGCAAGATGTCGGACTAGCTG........................................................................................................................ 22 1 1 3.00 3 2 0 0 1 0 0
.....................................................TGGCAAGATGTCAGAATAGCTGT....................................................................................................................... 23 2 1 3.00 3 2 0 0 1 0 0
.....................................................TGGCAAGATGTCGGAATCGCT......................................................................................................................... 21 1 1 3.00 3 1 0 0 2 0 0
.....................................................TGGCAAGATGTCGGACTAGCT......................................................................................................................... 21 1 1 3.00 3 3 0 0 0 0 0
.....................................................TGGCAAGATGTCTGAATAGCTGA....................................................................................................................... 23 1 1 3.00 3 3 0 0 0 0 0
.....................................................TGGCAAGATGTAGGAATAGCTT........................................................................................................................ 22 2 1 3.00 3 3 0 0 0 0 0
.....................................................TGGCAAGATGTCGGCATAGCTGTAA..................................................................................................................... 25 3 2 3.00 6 1 2 0 0 3 0
.....................................................TGGCAAGATGCCGGAATAGCT......................................................................................................................... 21 1 1 3.00 3 2 0 0 0 1 0
.......................................................GCAAGATGTCGGAATAGCT......................................................................................................................... 19 0 1 3.00 3 0 3 0 0 0 0
.....................................................TGTCAAGATGTCGGAATAGCTG........................................................................................................................ 22 1 1 3.00 3 3 0 0 0 0 0
.....................................................TGGCAAGATGGCGGAATAGCT......................................................................................................................... 21 1 1 3.00 3 1 0 0 2 0 0
.....................................................TGGCAAGATGTCGGAATAGATGAT...................................................................................................................... 24 2 1 3.00 3 3 0 0 0 0 0
.....................................................TGGCAAGATGTGGGAATAGCT......................................................................................................................... 21 1 1 3.00 3 3 0 0 0 0 0
...........................................................................................................................GGCTATGCCTCATCTAGTCA.................................................... 20 0 1 3.00 3 0 3 0 0 0 0
.....................................................TGGCAAGATGTCGCAATAGCT......................................................................................................................... 21 1 1 3.00 3 3 0 0 0 0 0
.....................................................TGGCAAGATGTCGGAGTAGCTGA....................................................................................................................... 23 1 1 3.00 3 3 0 0 0 0 0
.....................................................TGGCAAGATGTCGGAATACCTGA....................................................................................................................... 23 1 1 3.00 3 1 1 0 0 1 0
.....................................................TGGCAAGATGTCGGAATAGCTC........................................................................................................................ 22 1 1 3.00 3 0 2 0 1 0 0
.....................................................TGGCAAGATGTCGGAATGGCTGA....................................................................................................................... 23 1 1 3.00 3 1 1 0 1 0 0
.....................................................TGGCAAGATGTCGGAGTAGCTG........................................................................................................................ 22 1 1 3.00 3 3 0 0 0 0 0
.....................................................TGGCAAGAGGTCGGAATAGC.......................................................................................................................... 20 1 1 3.00 3 0 3 0 0 0 0
.....................................................CGGCAAGATGTCGGAATAGCT......................................................................................................................... 21 1 1 3.00 3 2 1 0 0 0 0
.....................................................TGGCAAGATGTCGGAATAGCTA........................................................................................................................ 22 1 1 3.00 3 2 1 0 0 0 0
...................................................TGTGGCAAGATGTCGGAATAGCT......................................................................................................................... 23 1 1 3.00 3 0 0 3 0 0 0
.....................................................TGGCAAGATGTCGGCATAGCTGAAAA.................................................................................................................... 26 3 2 3.00 6 3 2 0 0 1 0
.....................................................TGGCAAGATGTCGGAATAGCTGAC...................................................................................................................... 24 1 2 3.00 6 2 3 1 0 0 0
.....................................................TGGCAGGATGTCGGAATAGCTG........................................................................................................................ 22 1 1 3.00 3 0 1 0 2 0 0
...................................................TTTGGCAAGATGTCGGAATAAC.......................................................................................................................... 22 1 1 3.00 3 3 0 0 0 0 0
.....................................................TGGCAAGATGTCGGCATAGCTGTG...................................................................................................................... 24 2 2 3.00 6 4 1 0 0 1 0
.....................................................TGGCAAGATGTCGGTATAGCTG........................................................................................................................ 22 1 2 2.50 5 1 0 0 2 2 0
.....................................................TGGCAAGATGTCGGCATAGCTGTTA..................................................................................................................... 25 3 2 2.50 5 1 4 0 0 0 0
.....................................................TGGCAAGATGCCGGAATAGCTG........................................................................................................................ 22 1 1 2.00 2 0 1 0 1 0 0
.....................................................TGGCAAGATGTCGGCATAGCTGATAG.................................................................................................................... 26 2 1 2.00 2 1 1 0 0 0 0
.....................................................TGGAAAGATGTCGGAATAGCTT........................................................................................................................ 22 2 1 2.00 2 2 0 0 0 0 0
.....................................................TGGCAAGATGACGGAATAGC.......................................................................................................................... 20 1 1 2.00 2 2 0 0 0 0 0
.....................................................TGACAAGATGTCGGAATAGCTGA....................................................................................................................... 23 1 1 2.00 2 2 0 0 0 0 0
.....................................................TGGCAAGATGTCTGAATAGCTG........................................................................................................................ 22 1 1 2.00 2 2 0 0 0 0 0
.....................................................CGGCAAGATGTCGGAATAGCTG........................................................................................................................ 22 1 1 2.00 2 0 2 0 0 0 0
.....................................................TGGCAAGATGTCGAAATAGCT......................................................................................................................... 21 1 1 2.00 2 2 0 0 0 0 0
.......................................................TCAAGATGTCGGAATAGCT......................................................................................................................... 19 1 1 2.00 2 2 0 0 0 0 0
.....................................................TGGCGAGATGTCGGAATAGCTGA....................................................................................................................... 23 1 1 2.00 2 1 0 1 0 0 0
.....................................................TTGCAAGATGTCGGAATAGCTGC....................................................................................................................... 23 2 1 2.00 2 0 0 2 0 0 0
.....................................................TGGCAACATGTCGGAATAGCT......................................................................................................................... 21 1 1 2.00 2 2 0 0 0 0 0
.....................................................TGGCAAGATGTCGGAATAGA.......................................................................................................................... 20 1 1 2.00 2 1 0 0 0 1 0
...................................................TCTGGCAAGATGTCGGCATAGCTGA....................................................................................................................... 25 2 2 2.00 4 1 0 1 0 1 1
.....................................................TGGCAAAATGTCGGAATAGCT......................................................................................................................... 21 1 1 2.00 2 2 0 0 0 0 0
.....................................................TGGCAAGATGTCGGTATAGCTGAT...................................................................................................................... 24 2 2 2.00 4 1 0 0 2 1 0
.....................................................TGGCAAGATGTCGGAATAGTTGA....................................................................................................................... 23 1 1 2.00 2 0 0 1 1 0 0
.....................................................TGGCAAGATGTCGAAATAGCTGA....................................................................................................................... 23 1 1 2.00 2 1 1 0 0 0 0
.....................................................TGGCAAGATGTCGCAATAGCTGA....................................................................................................................... 23 1 1 2.00 2 2 0 0 0 0 0
.....................................................TGGCAAGATGTCGGAGTAGCT......................................................................................................................... 21 1 1 2.00 2 1 1 0 0 0 0
.....................................................TGTCAAGATGTCGGAATAGCTT........................................................................................................................ 22 2 1 2.00 2 1 0 0 0 1 0
.....................................................TGGCAAGATGTCGGAATAGCTGAAC..................................................................................................................... 25 2 1 2.00 2 1 0 1 0 0 0
.....................................................TGGCAAGATGTCGGATTAGCTGA....................................................................................................................... 23 1 1 2.00 2 0 0 0 2 0 0
.....................................................TGGCAATATGTCGGAATAGCTT........................................................................................................................ 22 2 1 2.00 2 1 1 0 0 0 0
.....................................................TGGCAAGATGTCGGAATACC.......................................................................................................................... 20 1 1 2.00 2 1 0 0 1 0 0
.....................................................TGGCAAGATGTCGGAATAGTT......................................................................................................................... 21 1 1 2.00 2 2 0 0 0 0 0
.....................................................TGGCAAGATTTCGGAATAGCTGA....................................................................................................................... 23 1 1 2.00 2 1 0 0 0 1 0
.....................................................TGGCAACATGTCGGAATAGCTGA....................................................................................................................... 23 1 1 2.00 2 0 0 0 1 0 1
.....................................................TGGCAAGATGTCGGAATAGATGATT..................................................................................................................... 25 3 1 2.00 2 2 0 0 0 0 0
.....................................................TGGCAAGATTTCGGAATAGCT......................................................................................................................... 21 1 1 2.00 2 2 0 0 0 0 0
.....................................................TGGCAAGATATCGGAATAGCTA........................................................................................................................ 22 2 1 2.00 2 0 1 0 1 0 0
....................................................TTGGCAAGATGTCGGAATAG........................................................................................................................... 20 0 1 2.00 2 1 1 0 0 0 0
....................................................CTGGCAAGATGTCGGAATAGCTG........................................................................................................................ 23 1 1 2.00 2 0 2 0 0 0 0
.....................................................TGGGAAGATGTCGGAATAGCTG........................................................................................................................ 22 1 1 2.00 2 1 0 0 1 0 0
.....................................................TCGCAAGATGTCGGAATAGCT......................................................................................................................... 21 1 1 2.00 2 1 0 1 0 0 0
.....................................................GGGCAAGATGTCGGAATAGC.......................................................................................................................... 20 1 1 2.00 2 0 2 0 0 0 0
.....................................................TGGCAAGGTGTCGGAATAGCTG........................................................................................................................ 22 1 1 2.00 2 0 1 0 1 0 0
.....................................................TGGCAAGATGTCGGTATAGCT......................................................................................................................... 21 1 2 2.00 4 2 2 0 0 0 0
......................................................TGCAAGATGTCGGAATAGCT......................................................................................................................... 20 1 1 2.00 2 1 0 1 0 0 0
.....................................................GGGCAAGATGTCGGAATAGCTGA....................................................................................................................... 23 1 1 2.00 2 0 1 0 1 0 0
.....................................................TGGCAAGAGGTCGGAATAGCTT........................................................................................................................ 22 2 1 2.00 2 0 2 0 0 0 0
.....................................................TGGCAAGACGTCGGAATAGCTGA....................................................................................................................... 23 1 1 2.00 2 1 1 0 0 0 0
.....................................................TGGCAAGATGTGGGAATAGC.......................................................................................................................... 20 1 1 2.00 2 2 0 0 0 0 0
.....................................................TGGCAAGATTTCGGAATAGCTG........................................................................................................................ 22 1 1 2.00 2 1 1 0 0 0 0
.....................................................TGGCAAGATGTCGGAATAGCTGATAT.................................................................................................................... 26 2 1 2.00 2 1 1 0 0 0 0
.....................................................TTGCAAGATGTCGGAATAGCTGT....................................................................................................................... 23 2 1 2.00 2 0 0 1 1 0 0
.....................................................TGGCAAGATGTAGGAATAGCTGAT...................................................................................................................... 24 2 1 2.00 2 1 0 0 0 1 0
.....................................................TGGCAAGATGTCGGATTAGCTT........................................................................................................................ 22 2 1 2.00 2 2 0 0 0 0 0
.....................................................TGGCAAGATGTCGTAATAGC.......................................................................................................................... 20 1 1 2.00 2 2 0 0 0 0 0
.....................................................TGGCAAGATGTAGGAATAGATGA....................................................................................................................... 23 2 1 2.00 2 1 0 0 0 1 0
.....................................................TGGCAAGATGTAGGAATAGC.......................................................................................................................... 20 1 1 2.00 2 2 0 0 0 0 0
.....................................................TGGCAAGATGTCGGAATACCTG........................................................................................................................ 22 1 1 2.00 2 2 0 0 0 0 0
.....................................................TGGCAAGATGTCGTAATAGCTT........................................................................................................................ 22 2 1 2.00 2 2 0 0 0 0 0
.....................................................TGGCAAGATGTCAGAATAGCTT........................................................................................................................ 22 2 1 2.00 2 2 0 0 0 0 0
.....................................................TGGCAAGATGTCGGCATAGCTGTGT..................................................................................................................... 25 3 2 1.50 3 2 0 0 1 0 0
.....................................................TGGCAAGATGGCGGTATAGCTGA....................................................................................................................... 23 2 2 1.50 3 2 0 0 1 0 0
.....................................................TGCCAAGATGTCGGAATAGC.......................................................................................................................... 20 1 2 1.50 3 0 0 3 0 0 0
......................................................GGCAAGATGTCGGCATAGCTGAG...................................................................................................................... 23 1 2 1.50 3 0 3 0 0 0 0
..................................................TTTTGGCAAGATGTCGGCATAGCA......................................................................................................................... 24 3 2 1.50 3 0 3 0 0 0 0
.....................................................TGGCAAGAGGTCGGCATAGCTGAAA..................................................................................................................... 25 3 2 1.50 3 0 3 0 0 0 0
.....................................................TGGCAAGATGTCGGGATAGCT......................................................................................................................... 21 1 2 1.50 3 3 0 0 0 0 0
.....................................................AGGCAAGATGTCGGAACAGCTG........................................................................................................................ 22 2 1 1.00 1 0 0 0 1 0 0
.....................................................AGGCAAGACGTCGGAATAGCTGA....................................................................................................................... 23 2 1 1.00 1 0 0 0 1 0 0
............................................................................................................................GCTATGCCTCATCTAGTCAAT.................................................. 21 0 1 1.00 1 0 1 0 0 0 0
.....................................................TGGAAAGATGTCGCAATAGC.......................................................................................................................... 20 2 1 1.00 1 1 0 0 0 0 0
...................................................TTTGGCAAGATGTCTGAATAGCT......................................................................................................................... 23 1 1 1.00 1 1 0 0 0 0 0
.....................................................TGGCAAGATGTCGGAATAT........................................................................................................................... 19 1 1 1.00 1 1 0 0 0 0 0
.....................................................TGGCAAGATGTCGGAACAGCTGA....................................................................................................................... 23 1 1 1.00 1 0 0 0 1 0 0
.....................................................TGGCAAGATGACGGAATAGCTGT....................................................................................................................... 23 2 1 1.00 1 0 0 0 1 0 0
...................................................TTTGGCGAGATGTCGGAATAGC.......................................................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0
.....................................................TGGCAAGACGTCGGAATAGCTGATT..................................................................................................................... 25 3 1 1.00 1 1 0 0 0 0 0
.....................................................TGGGAAGATGTCGGAATAGCT......................................................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0
.....................................................TAGCAAGATGGCGGAATAGCTGA....................................................................................................................... 23 2 1 1.00 1 0 0 0 1 0 0
.......................................................GCAAGATGGCGGAATAGCTG........................................................................................................................ 20 1 1 1.00 1 0 1 0 0 0 0
.....................................................TGGCAAGATGTCCGAATAGC.......................................................................................................................... 20 1 1 1.00 1 1 0 0 0 0 0
.....................................................TAGCAAGATGTCGGAAAAGCTGA....................................................................................................................... 23 2 1 1.00 1 0 0 0 1 0 0
.....................................................TGGCAAGGTGTCGGAATAGCTT........................................................................................................................ 22 2 1 1.00 1 0 0 0 1 0 0
.....................................................TGGCAAGATGTAGGAATAGCTGATT..................................................................................................................... 25 3 1 1.00 1 0 0 0 0 1 0
.....................................................TGGCAAGATCACGGAATAGCGGA....................................................................................................................... 23 3 1 1.00 1 0 0 0 1 0 0
.....................................................TGGCAAGATGTCGGTATAGCTGATT..................................................................................................................... 25 3 2 1.00 2 1 0 0 0 1 0
.....................................................TGGCAACATGTCGCAATAGCTGA....................................................................................................................... 23 2 1 1.00 1 0 0 0 1 0 0
.....................................................TGGCAAGATGGCGGAATAGTTGA....................................................................................................................... 23 2 1 1.00 1 0 0 0 1 0 0
.....................................................TGGCAAGATGTCGGATTAGCTGT....................................................................................................................... 23 2 1 1.00 1 1 0 0 0 0 0
...................................................TTTGGCAAGAAGTCGGAATAGCT......................................................................................................................... 23 1 1 1.00 1 1 0 0 0 0 0
.....................................................GGGCAAGGTGTCGGAATAGCT......................................................................................................................... 21 2 1 1.00 1 0 0 0 1 0 0
.....................................................TGGCAAGGTGTCGGAATAGCTGAA...................................................................................................................... 24 2 1 1.00 1 1 0 0 0 0 0
.....................................................TGGCAAGATGTCGAAATCGCTGA....................................................................................................................... 23 2 1 1.00 1 1 0 0 0 0 0
...................................................TTTGGCAAGATGTCGGAATAGAC......................................................................................................................... 23 2 1 1.00 1 0 0 1 0 0 0
.....................................................TGGCAAGATGTCGGAATAGCTTAT...................................................................................................................... 24 2 1 1.00 1 1 0 0 0 0 0
.....................................................TGGCAGGATGTCGGAATAGCTGT....................................................................................................................... 23 2 1 1.00 1 0 0 0 1 0 0
.....................................................TGGCTAGATGTCGGAATAGCTG........................................................................................................................ 22 1 1 1.00 1 1 0 0 0 0 0
.....................................................TGGCAAGATGTCTGAATAGCTT........................................................................................................................ 22 2 1 1.00 1 1 0 0 0 0 0
.....................................................TGGCGAGATGTCGGAATAG........................................................................................................................... 19 1 1 1.00 1 0 1 0 0 0 0
......................................................TGCAAGATGTCGGAATAGCTG........................................................................................................................ 21 1 1 1.00 1 0 1 0 0 0 0
.....................................................TGGCAAGCTGTCGGAATAGCTGA....................................................................................................................... 23 1 1 1.00 1 0 0 1 0 0 0
.....................................................TTGCAAGATGTCGGAATAGCTT........................................................................................................................ 22 2 1 1.00 1 1 0 0 0 0 0
.....................................................TGGCAACATGTCGGAATAGCTTT....................................................................................................................... 23 3 1 1.00 1 0 0 0 1 0 0
.....................................................TGGCAAGATGTCGGAAGACCT......................................................................................................................... 21 2 1 1.00 1 0 0 0 1 0 0
.....................................................TGGCAAGATGTCGCAACAGCTG........................................................................................................................ 22 2 1 1.00 1 0 0 0 1 0 0
.....................................................TGGAAAGATGTCGGAATAGCTGAT...................................................................................................................... 24 2 1 1.00 1 0 0 0 0 1 0
.....................................................TGGCAAGAGGTCGGAATAGCTGATT..................................................................................................................... 25 3 1 1.00 1 0 1 0 0 0 0
.....................................................TGGCAAGATGTCGGAATAGCGGATT..................................................................................................................... 25 3 1 1.00 1 1 0 0 0 0 0
.....................................................TGGCAAGCTGTCGGAATAGCTTA....................................................................................................................... 23 2 1 1.00 1 0 0 0 1 0 0
.....................................................CGGCAAGATGTCGTAATACCTG........................................................................................................................ 22 3 1 1.00 1 0 0 0 0 0 1
.......................................................GCAAGATGTCGGAATAGCTT........................................................................................................................ 20 1 1 1.00 1 0 1 0 0 0 0
...................................................TTTGGCAAGATGTCGGAGTAGC.......................................................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0
.....................................................TGGCAAGATGTTGGAATAGC.......................................................................................................................... 20 1 1 1.00 1 1 0 0 0 0 0
.....................................................TGGCAAGAGGTCGGAATAGCTGAA...................................................................................................................... 24 2 1 1.00 1 0 1 0 0 0 0
.....................................................TCGCAAGATGTCGGAATAGCTGATT..................................................................................................................... 25 3 1 1.00 1 1 0 0 0 0 0
.....................................................TGGCAAGGTGGCGGAATAGCTGA....................................................................................................................... 23 2 1 1.00 1 0 0 0 1 0 0
....................................................TTGGCAAGATGTCGGAATAGCTTT....................................................................................................................... 24 2 1 1.00 1 0 1 0 0 0 0
.....................................................TAACAAGATGTCGCAATAGCTGA....................................................................................................................... 23 3 1 1.00 1 0 0 0 1 0 0
.....................................................TGGCAAGATGTCGGAATATCTCT....................................................................................................................... 23 3 1 1.00 1 0 0 0 1 0 0
.....................................................TGGCAAGATGTCGGAAGAGCAG........................................................................................................................ 22 2 1 1.00 1 0 0 0 1 0 0
.....................................................TGGCAAGATGTAGGAATAGATGAT...................................................................................................................... 24 3 1 1.00 1 0 0 0 0 1 0
.....................................................TGGCAAGATGTCGCAATAGCTGCT...................................................................................................................... 24 3 1 1.00 1 0 0 0 1 0 0
....................................................GTGGCAAGATGTCGGAATAGCTGA....................................................................................................................... 24 1 1 1.00 1 0 1 0 0 0 0
.....................................................GGGCAAGATGTCGGAATAGCTG........................................................................................................................ 22 1 1 1.00 1 0 1 0 0 0 0
.....................................................TGGCAAGATGGCGGAATAGCTG........................................................................................................................ 22 1 1 1.00 1 0 0 0 1 0 0
.....................................................TGGCAAGATGTCGGAATAGCTGTAT..................................................................................................................... 25 3 1 1.00 1 1 0 0 0 0 0
.....................................................TGGAAAGATGTCGGAATAGC.......................................................................................................................... 20 1 1 1.00 1 1 0 0 0 0 0
.....................................................TGGCAAGATGTCGGAATAGCATA....................................................................................................................... 23 2 1 1.00 1 1 0 0 0 0 0
........................................................CAAGATGTCGGAATATCTGA....................................................................................................................... 20 1 1 1.00 1 0 1 0 0 0 0
.....................................................TGGCAAGATGCCGGACTAGCTTA....................................................................................................................... 23 3 1 1.00 1 0 0 0 1 0 0
.....................................................TGGCATCATGTCGGAATAGCTG........................................................................................................................ 22 2 1 1.00 1 0 0 0 1 0 0
.....................................................TGGCAAGATGTCGAAATAGC.......................................................................................................................... 20 1 1 1.00 1 1 0 0 0 0 0
.....................................................TGGTAAGATGACGCAATAGCTGA....................................................................................................................... 23 3 1 1.00 1 0 0 0 1 0 0
.....................................................AGGCAAGATGTCGGAATAGCTG........................................................................................................................ 22 1 1 1.00 1 0 0 0 1 0 0
.....................................................TGGCAAGATGTCGGAATAGCCT........................................................................................................................ 22 2 1 1.00 1 1 0 0 0 0 0
...................................................TTTGGCAAGACGTCAGAATAGC.......................................................................................................................... 22 2 1 1.00 1 1 0 0 0 0 0
.....................................................TGGCAAGATGTCGGAATAGCGT........................................................................................................................ 22 2 1 1.00 1 1 0 0 0 0 0
...................................................TTTTGCAAGATGTCGGAATAGC.......................................................................................................................... 22 1 1 1.00 1 0 0 0 1 0 0
.......................................................GCGAGATGTCGGAATAGCTGA....................................................................................................................... 21 1 1 1.00 1 0 1 0 0 0 0
...................................................TTCGGCAAGATGTCGGAATAGCC......................................................................................................................... 23 2 1 1.00 1 0 0 1 0 0 0
.....................................................TGGCAAGATCTCGAAATACCTG........................................................................................................................ 22 3 1 1.00 1 0 0 0 1 0 0
.....................................................TGGCAAGATGTCGAAATAGCGGC....................................................................................................................... 23 3 1 1.00 1 0 0 0 1 0 0
.....................................................TGGCAAGATGTCGCAATAGCTTT....................................................................................................................... 23 3 1 1.00 1 1 0 0 0 0 0
.....................................................TTCCAAGATGTCGGAATAGCT......................................................................................................................... 21 2 1 1.00 1 0 0 1 0 0 0
......................................................GGCAAGATCTCGGAATAGCTG........................................................................................................................ 21 1 1 1.00 1 0 1 0 0 0 0
...................................................TTTGGCAAGATGTCGGAATATCT......................................................................................................................... 23 1 1 1.00 1 1 0 0 0 0 0
.....................................................TGGCAAGAGGTCGGAATAGCTGAT...................................................................................................................... 24 2 1 1.00 1 0 1 0 0 0 0
.....................................................TGTCAAGATGTCGGCATAGCTGAAA..................................................................................................................... 25 3 2 1.00 2 1 0 0 0 1 0
.....................................................TGGCAAGATGTCGTAATAGCTGA....................................................................................................................... 23 1 1 1.00 1 1 0 0 0 0 0
.....................................................TGGCAAGATATCGGAATAGCTT........................................................................................................................ 22 2 1 1.00 1 1 0 0 0 0 0
.....................................................TGACAAGATGTCGGAATAGAT......................................................................................................................... 21 2 1 1.00 1 1 0 0 0 0 0
.....................................................TGGGAAGATGTCGGAATAGCTGA....................................................................................................................... 23 1 1 1.00 1 1 0 0 0 0 0
.....................................................CGGCAAGATGTCGGAATAGCTGT....................................................................................................................... 23 2 1 1.00 1 1 0 0 0 0 0
......................................................GGCAAGATGTCGGAATAGCTGTT...................................................................................................................... 23 2 1 1.00 1 0 1 0 0 0 0
....................................................TTGGCAAGATGTCGGAATAGCTGA....................................................................................................................... 24 0 1 1.00 1 0 0 1 0 0 0

Anti-sense strand reads

TCTTTCACGGGCAGGGTCCTGCCCTGTCGTAGGAGCTTCTGTTTATTACTTAAACCGTTCTACAGCCTTATCGACTCTCGTGTCTCCTAGCTCGCTCAGTAGCTGGCTCTGCTTAAGGTTTCGCCGATACGGAGTAGATCAGTTAATGTAATGAAACTGTGAAAGGTGCTCCCTACGACGTCACGGATCAAGGTA

***********************************..(((((((((...(((((.(((((..((.(((((((.............(((..(((....)))..)))..............))))))).)).))))).)))))...))))).))))...************************************** 		Read size # Mismatch Hit Count Total Norm Total M058

embryo

 M044

female body

 V055

head

 V105

male body
..............................................................................................................................................TTAATGAAGTGAAACTGTGA................................. 20 2 7 0.14 1 1 0 0 0
.........................GTCGTGGGAGCTCCTGTAT....................................................................................................................................................... 19 3 19 0.11 2 0 2 0 0
......................................................................TCGACTTTAGTGTCTCCTTG......................................................................................................... 20 3 14 0.07 1 1 0 0 0
............................................................................................................................CGATACGGCGTAGAACGGT.................................................... 19 3 20 0.05 1 0 0 0 1
.................................................................................................AGTCGCTGGCTAGGCTTAA............................................................................... 19 3 20 0.05 1 0 0 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Type Alignment
droAna3 scaffold_13047:712397-712591 - dan-mir-31b Known_mirbase AGAAAGT--GCC----CGT-----------------CCCAGGAC----GGGAC---AG-----------------------------CATCCTCG-AA--GACAAATAATGAATTTGGCAAGATGTCGGAATAGCTGAGAG-CACAG--AG-------GAT----CGAGCGAGTC-ATCGACCGAGACG-A------------ATT-----CCAAA--GCGGCTATGCCTCATCTAGTCAATTACATTACTTTGACACTTTCCACGAGGGATGCTGCAGTGCCTAGTTCCAT
droBip1 scf7180000396431:497998-498142 - AG----TG--CT---------------TTGCT-------------AGTGGGACAT-G-------------------------------GTCCTTC-GA--GACAAATAATGAATTTGGCAAGATGTCGGAATAGCTGAGAG-CGCAG--AG-------GAT----CGA-----------------------------------TT------CGAAA--GCGGCTATGCCTCATCTAGTCAATTACATTACTTTGACACTTTCAACGAGGGA---------------------
droKik1 scf7180000302698:201010-201172 + AA-----AT--A----------------TTAAATATCCCT------GCT-------GG--------------------AAATA------------TAAAACAAAACTAATGAATTTGGCAAGATGTCGGAATAGCTGAGAG-CACAG--AG-------GAT----CGAGCAAGTTGATCGATCCCAAAA-ATGTGAAAA-ATTTTT-----GAGAA--GCGGCTATGCCTCATCTAGTCAATTGCATTACTTTG--------------------------------------
droFic1 scf7180000453829:856121-856300 - TTAAAGT--GCA--------------TTTGCA------------AAGTT-------AG------------------------------CTCCTTATTA--GACAAATAATGAATTTGGCAAGATGTCGGAATAGCTGAGAG-CACAG--CG-------GAT----CGAGAAACTT-ATCGACCGAAAAA-ATGTGATTA-TTTTTT-----AAAAA--GCGGCTATGCCTCATCTAGTCAATTGCATTAATTTGACACTATCAACGTGGGA---------------------
droEle1 scf7180000491006:2391274-2391455 - CTCAAGT------------------GTCTGCG------------ATGTT-------GG------------------------------CTCCTTATTA--GACAAATAATGAATTTGGCAAGATGTCGGAATAGCTGAGAG-CACAG--CG-------GAT----CGAGCCAGTT-ATCGACCGAAAAA-ATGTGAATA-TTTTTG-----AAAAA--GCGGCTATGCCTCATCTAGTCAATTGCATTACTTTGACACTATCAACGCGGTACCCT-----------------
droRho1 scf7180000779841:401686-401860 - AA---GT------------------GTCTGCC------------AAGTA-------AA------------------------------CTCCTTGTTA--GACAAATAATGAATTTGGCAAGATGTCGGAATAGCTGAAAG-CACAG--CG-------GAT----CGAGCCACTT-ATCGACCGAAAAT-ATGTGAATA-TTTTTT-----AAAAA--GCGGCTATGCCTCATCTAGTCAATTGCATTAATTTGACACTATCAACGTGAAA---------------------
droBia1 scf7180000301760:2615078-2615230 - CCCAAGT------------------GCTTGCA------------AAGTTACACAC-AG------------------------------CTCCTCGTTA--GACAAATAATGAATTTGGCAAGATGTCGGAATAGCTGAGAG-CACAG--CG--------------------------------------------AATA-TTTTTC-----AAAAA--GCGGCTATGCCTCATCTAGTCAATTGCATTACTTTGACACTATCAACGCGGGA---------------------
droTak1 scf7180000415169:1035700-1035869 + G-------------------------TTTGCA------------AAGTT-------AG------------------------------CTCCTCGTTA--GACAAATAATGAATTTGGCAAGATGTCGGAATAGCTGAGAG-CACAG--CG-------GAT----CGAGTCTTTTTATCGACCGAAAAA-ATGTGAATA-TTTTTT-----AAAAA--GCGGCTATGCCTCATCTAGTCAATTGCATTACTTTGACACCAGCAACGAGG-----------------------
droEug1 scf7180000408176:324230-324415 - G-----TGT--T----TTT-----------------TTTTTGATAAGCA-----TCAA------------------------------CTCC----TA--GACAAATAATGAATTTGGCAAGATGTCGGAATAGCTGAGAG-CACAG--CG-------GTT----CGAGACTTTTCCTCAACCGGAAAA-ATGTGAAAA-TTTTTT-----AAAAA--GCGGCTATGCCTCATCTAGTCAATTGCATTAATTTGACACTATCAACGTGGGAGGATTCA--------------
dm3 chrX:8887321-8887486 - dme-mir-31b Known_mirbase CG-----------------------------A------------AAGTT-------CG------------------------------CTCCACGTTA--GACAAATAATGAATTTGGCAAGATGTCGGAATAGCTGAGAG-CACAG--CG-------GAT----CGAACATTTT-ATCGTCCGAAAAA-ATGTGATTA-TTTTT------GAAAA--GCGGCTATGCCTCATCTAGTCAATTGCATTACTTTGACTCTATCAGCGTTGGA---------------------
droSim2 x:8436325-8436511 - dsi-mir-31b Known_mirbase AA--AGT--GCC----CTTTTGAGTGTTTTGA------------AAGTT-------CG------------------------------CTCCTCGTTA--GACAAATAATGAATTTGGCAAGATGTCGGAATAGCTGAGAG-CACAG--CG-------GAT----CGAGCCTCTT-ATCGTCCGAAAAA-ATGTGATTA-TTTTT------GAAAA--GCGGCTATGCCTCATCTAGTCAATTGCATTACTTTGACGCTATCAACGTTGGA---------------------
droSec2 scaffold_34:250167-250352 - dse-mir-31b Known_mirbase AA--AGT--GCC----CTT-TGAGTGTTTTGA------------AAGTT-------TG------------------------------CTCCTCGTTA--GACAAATAATGAATTTGGCAAGATGTCGGAATAGCTGAGAG-CACAG--CG-------GAT----CGAGCCTCTT-ATCGTCCGAAAAA-ATGTGATTA-TTTTT------GAAAA--GCGGCTATGCCTCATCTAGTCAATTGCATTACTTTGACGCTATCAACGTTGGA---------------------
droYak3 X:12425662-12425842 + dya-mir-31b Known_mirbase GT-----GT--T----------------TTGAATGTC-------TCGTT-------TT------------------------------CTCCTCGTTA--GACAAATAATGAATTTGGCAAGATGTCGGAATAGCTGAGAG-CACAG--CG-------GAT----CGAGCCTTTG-ATCGTCCGAAAAA-ATGTGAATA-TTTTT------TAAAA--GCGGCTATGCCTCATCTAGTCAATTGCATTACTTTGACTCTATCAGCGTTGGAGGCT-----------------
droEre2 scaffold_4690:6225270-6225453 + der-mir-31b Known_mirbase AA---GT--GCC----CTT--AAGTGTTCCGC------------AAGTT-------CG------------------------------CTCCTCGTTA--GACAAATAATGAATTTGGCAAGATGTCGGAATAGCTGAGAG-CACAG--CG-------GAT----CGAGCCTCTT-ATCGTCCGAAAAA-ATGTGAATA-TTTTT------GAAAA--GCGGCTATGCCTCATCTAGTCAATTGCATTACTTTGACACTATCAACGTTGGA---------------------
dp5 XL_group1e:8162323-8162467 - dps-mir-31b Known_mirbase GT-----GT--GCGTGT--------GTGTGCG------------TGTGT-------G------------------------------TGTCC-----T--GACAAATAATGAATTTGGCAAGATGTCGGAATAGCTGAGAG-CAAAA--AG--------------------------------------------AAGA-TGATTT-----GAAAT--GCGGCTATGCCTCATCTAGTCAATTGCATTCATTTGATTCTATCAACGATGAA---------------------
droPer2 scaffold_13:404292-404437 + dpe-mir-31b Known_mirbase TGT----GT--GTGTGC----------GTGC-----------------------------------------------GTGTGTGTGTGTCC-----T--GACAAATAATGAATTTGGCAAGATGTCGGAATAGCTGAGAG-CAAAA--AG--------------------------------------------AAGA-TGATTT-----GAAAT--GCGGCTATGCCTCATCTAGTCAATTGCATTCATTTGATTCTATCAACGATGAA---------------------
droWil2 scf2_1100000004963:794464-794626 + dwi-mir-31b Known_mirbase AG-----GA--T----C------------AC-----------------------------------------------GAATGTG---AT----G-AA--AACAACTAGTGGATTTGGCAAGATGTCGGAATAGCTGAAAGTCACACAAAA-TCATAAAATGTTTGCCGTTTTGTT----------ATTGTTGTGAATT-TTATTGATTTCAAAAATTACGGCTATGCCTCATCTAGTCAATTGCATTAGTTTGA-------------------------------------
droVir3 scaffold_12726:2775751-2775941 - dvi-mir-31b Known_mirbase TG----TGA--T------------TGCTT-----A---ACTGAAAAGTC-------CTGCCAGCACCATTTGCAGCACATATATATAAAT-----ATA--GACAAATAATGAATTTGGCAAGATGTCGGAATAGCTGAGAG-CACAA--AG-TCATA-AAT----CCAGAATTTCT----------ATT-TTGTGTATTTTTATTGA----GTACA--GCGGCTATGCCTCATCTAGTCAATTGCATTCATTTGACA-----------------------------------
droMoj3 scaffold_6473:5711125-5711294 + dmo-mir-31b Known_mirbase CA-TAGT--GCT----C------------GG-----------------------------------------------TAATGTG---GTCCTCG-------CAAATAATGAATTTGGCAAGATGTCGGAATAGCTGAGAG-CACAA--ATATCATAGAAT----CCAGAATTTAT----------ATT-TTGTGTATT-TTATTGA----GTACA--GCGGCTATGCCTCATCTAGTCAATTGCATTCATTTGACAGCAGCAACCAAGGA---------------------
droGri2 scaffold_15203:6378281-6378427 - dgr-mir-31b Known_mirbase CC-------------------------------------------------------------------------------------------CG-CA--AACAAATAATGAATTTGGCAAGATGTCGGAATAGCTGACAG-CACAA--GA-TCACA-AAT----CAAGAAACTTT----------ATT-TTGTGTATTTTTATTGA----GTACA--GCGGCTATGCCTCATCTAGTCAATTGCATTCATTTGACATCAACAACGA-------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droAna3
AGAAAGT--GCC----CGT-----------------CCCAGGAC----GGGAC---AG-----------------------------CATCCTCG-AA--GACAAATAATGAATTTGGCAAGATGTCGGAATAGCTGAGAG-CACAG--AG-------GAT----CGAGCGAGTC-ATCGACCGAGACG-A------------ATT-----CCAAA--GCGGCTATGCCTCATCTAGTCAATTACATTACTTTGACACTTTCCACGAGGGATGCTGCAGTGCCTAGTTCCATSizeHit CountTotal NormTotalM044

Female-body		M058

Embryo		V039

Embryo		V055

Head		V105

Male-body		V106

Head
...................................................................................................................TGGCAAGATGTCGGAATAGCTGA..........................................................................................................................................................2312162.002162543226401091091153
...................................................................................................................TGGCAAGATGTCGGAATAGCT............................................................................................................................................................2111778.00177859618259107033
...................................................................................................................TGGCAAGATGTCGGAATAGCTG...........................................................................................................................................................2211458.0014587565847254424
...................................................................................................................TGGCAAGATGTCGGAATAGC.............................................................................................................................................................201410.00410102351112565
...................................................................................................................TGGCAAGATGTCGGAATAGCTT...........................................................................................................................................................221207.00207791071146
.................................................................................................................TTTGGCAAGATGTCGGAATAGCT............................................................................................................................................................231126.001263028311522
...................................................................................................................TGGCAAGATGTCGGAATAGCTGAT.........................................................................................................................................................241109.0010930206656
...................................................................................................................TGGCAAGATGTCGGAATAGCTGT..........................................................................................................................................................231105.00105350013570
.................................................................................................................TTTGGCAAGATGTCGGAATAGC.............................................................................................................................................................22175.00757206582
....................................................................................................................GGCAAGATGTCGGAATAGCTG...........................................................................................................................................................21172.00727000020
...................................................................................................................TGGCAAGATGTCGGAATAG..............................................................................................................................................................19161.006125000342
....................................................................................................................GGCAAGATGTCGGAATAGCTGA..........................................................................................................................................................22152.00525200000
....................................................................................................................GGCAAGATGTCGGAATAGCT............................................................................................................................................................20151.00515100000
...................................................................................................................TGGCAAGATGTCGGAATAGCTGATT........................................................................................................................................................25149.00494011376
...................................................................................................................TGGCAAGATGTCGGAATAGCTGAA.........................................................................................................................................................24135.003511412152
...................................................................................................................TGGCAAGATGTCGGAATAGCTGTT.........................................................................................................................................................24130.003015003102
...................................................................................................................TGGCAAGATGTCGGAATAGCTTT..........................................................................................................................................................23126.002610000151
..................................................................................................................TTGGCAAGATGTCGGAATAGCT............................................................................................................................................................22117.0017900080
.................................................................................................................TTTGGCAAGATGTCGGAATAG..............................................................................................................................................................21113.0013900040
...................................................................................................................TGGCAAGATGTCGGAATAGCC............................................................................................................................................................21113.0013080050
...................................................................................................................TGGCAAGATGTCGGAATAGCA............................................................................................................................................................21113.00132000101
...................................................................................................................TGGCAAGATGTCGGAATAGCG............................................................................................................................................................21113.00130000130
...................................................................................................................TGGCAAGATGTCGGAATAGCTGTTT........................................................................................................................................................25112.0012300090
....................................................................................................................GGCAAGATGTCGGAATAGC.............................................................................................................................................................19112.00121200000
.................................................................................................................TTTGGCAAGATGTCGGAATAGCTT...........................................................................................................................................................24112.0012600240
.....................................................................................................................GCAAGATGTCGGAATAGCTG...........................................................................................................................................................20110.00101000000
..................................................................................................................TTGGCAAGATGTCGGAATAGC.............................................................................................................................................................21110.0010300061
..................................................................................................................TTGGCAAGATGTCGGAATAGCTG...........................................................................................................................................................23110.0010210160
............................................................................................................................................................................................................................GGCTATGCCTCATCTAGTCAAT..................................................2219.009720000
....................................................................................................................GGCAAGATGTCGGAATAGCTGAT.........................................................................................................................................................2318.008800000
...................................................................................................................TGGCAAGATGTCGGAATAGCTTTT.........................................................................................................................................................2417.007300040
....................................................................................................................GGCAAGATGTCGGAATAGCTT...........................................................................................................................................................2117.007700000
.................................................................................................................TTTGGCAAGATGTCGGAATAGCC............................................................................................................................................................2317.007070000
...................................................................................................................TGGCAAGATGTCGGAATAGCTGG..........................................................................................................................................................2316.006103020
.....................................................................................................................GCAAGATGTCGGAATAGCTGA..........................................................................................................................................................2116.006500010
...................................................................................................................TGGCAAGATGTCGGAATAGCTGC..........................................................................................................................................................2315.005120110
...................................................................................................................TGGCAAGATGTCGGAATAGCTGATTT-......................................................................................................................................................2624.509200070
.................................................................................................................TTTGGCAAGATGTCGGAAT................................................................................................................................................................1914.004100030
...................................................................................................................TGGCAAGATGTCGGAATT...............................................................................................................................................................1814.004400000
......................................................................................................................CAAGATGTCGGAATAGCT............................................................................................................................................................1814.004200002
....................................................................................................................GGCAAGATGTCGGAATAGCTGT..........................................................................................................................................................2214.004400000
...................................................................................................................TGGCAAGATGTCGGAATAGCTGAAT........................................................................................................................................................2513.003000030
...................................................................................................................TGGCAAGATGTCGGAATAGCAT...........................................................................................................................................................2213.003000030
.....................................................................................................................GCAAGATGTCGGAATAGCT............................................................................................................................................................1913.003300000
............................................................................................................................................................................................................................GGCTATGCCTCATCTAGTCA....................................................2013.003300000
...................................................................................................................TGGCAAGATGTCGGAATAGCTC...........................................................................................................................................................2213.003200100
...................................................................................................................TGGCAAGATGTCGGAATAGCTA...........................................................................................................................................................2213.003100020
...................................................................................................................TGGCAAGATGTCGGAATAGCTGAC.........................................................................................................................................................2423.006310020
...................................................................................................................TGGCAAGATGTCGGAATAGA.............................................................................................................................................................2012.002000011
...................................................................................................................TGGCAAGATGTCGGAATAGCTGAAC........................................................................................................................................................2512.002010010
..................................................................................................................TTGGCAAGATGTCGGAATAG..............................................................................................................................................................2012.002100010
.............................................................................................................................................................................................................................GCTATGCCTCATCTAGTCAAT..................................................2111.001100000
...................................................................................................................TGGCAAGATGTCGGAATAT..............................................................................................................................................................1911.001000010
.................................................................................................................TTTGGCAAGATGTCGGAATAGAC............................................................................................................................................................2311.001010000
.....................................................................................................................GCAAGATGTCGGAATAGCTT...........................................................................................................................................................2011.001100000
..................................................................................................................TTGGCAAGATGTCGGAATAGCTTT..........................................................................................................................................................2411.001100000
...................................................................................................................TGGCAAGATGTCGGAATAGCTGTAT........................................................................................................................................................2511.001000010
...................................................................................................................TGGCAAGATGTCGGAATAGCCT...........................................................................................................................................................2211.001000010
...................................................................................................................TGGCAAGATGTCGGAATAGCGT...........................................................................................................................................................2211.001000010
....................................................................................................................GGCAAGATGTCGGAATAGCTGTT.........................................................................................................................................................2311.001100000
..................................................................................................................TTGGCAAGATGTCGGAATAGCTGA..........................................................................................................................................................2411.001010000
droBip1
AG----TG--CT---------------TTGCT-------------AGTGGGACAT-G-------------------------------GTCCTTC-GA--GACAAATAATGAATTTGGCAAGATGTCGGAATAGCTGAGAG-CGCAG--AG-------GAT----CGA-----------------------------------TT------CGAAA--GCGGCTATGCCTCATCTAGTCAATTACATTACTTTGACACTTTCAACGAGGGA---------------------SizeHit CountTotal NormTotal
No Reads
droKik1
AA-----AT--A----------------TTAAATATCCCT------GCT-------GG--------------------AAATA------------TAAAACAAAACTAATGAATTTGGCAAGATGTCGGAATAGCTGAGAG-CACAG--AG-------GAT----CGAGCAAGTTGATCGATCCCAAAA-ATGTGAAAA-ATTTTT-----GAGAA--GCGGCTATGCCTCATCTAGTCAATTGCATTACTTTG--------------------------------------SizeHit CountTotal NormTotal
No Reads
droFic1
TTAAAGT--GCA--------------TTTGCA------------AAGTT-------AG------------------------------CTCCTTATTA--GACAAATAATGAATTTGGCAAGATGTCGGAATAGCTGAGAG-CACAG--CG-------GAT----CGAGAAACTT-ATCGACCGAAAAA-ATGTGATTA-TTTTTT-----AAAAA--GCGGCTATGCCTCATCTAGTCAATTGCATTAATTTGACACTATCAACGTGGGA---------------------SizeHit CountTotal NormTotal
No Reads
droEle1
CTCAAGT------------------GTCTGCG------------ATGTT-------GG------------------------------CTCCTTATTA--GACAAATAATGAATTTGGCAAGATGTCGGAATAGCTGAGAG-CACAG--CG-------GAT----CGAGCCAGTT-ATCGACCGAAAAA-ATGTGAATA-TTTTTG-----AAAAA--GCGGCTATGCCTCATCTAGTCAATTGCATTACTTTGACACTATCAACGCGGTACCCT-----------------SizeHit CountTotal NormTotal
No Reads
droRho1
AA---GT------------------GTCTGCC------------AAGTA-------AA------------------------------CTCCTTGTTA--GACAAATAATGAATTTGGCAAGATGTCGGAATAGCTGAAAG-CACAG--CG-------GAT----CGAGCCACTT-ATCGACCGAAAAT-ATGTGAATA-TTTTTT-----AAAAA--GCGGCTATGCCTCATCTAGTCAATTGCATTAATTTGACACTATCAACGTGAAA---------------------SizeHit CountTotal NormTotal
No Reads
droBia1
CCCAAGT------------------GCTTGCA------------AAGTTACACAC-AG------------------------------CTCCTCGTTA--GACAAATAATGAATTTGGCAAGATGTCGGAATAGCTGAGAG-CACAG--CG--------------------------------------------AATA-TTTTTC-----AAAAA--GCGGCTATGCCTCATCTAGTCAATTGCATTACTTTGACACTATCAACGCGGGA---------------------SizeHit CountTotal NormTotal
No Reads
droTak1
G-------------------------TTTGCA------------AAGTT-------AG------------------------------CTCCTCGTTA--GACAAATAATGAATTTGGCAAGATGTCGGAATAGCTGAGAG-CACAG--CG-------GAT----CGAGTCTTTTTATCGACCGAAAAA-ATGTGAATA-TTTTTT-----AAAAA--GCGGCTATGCCTCATCTAGTCAATTGCATTACTTTGACACCAGCAACGAGG-----------------------SizeHit CountTotal NormTotal
No Reads
droEug1
G-----TGT--T----TTT-----------------TTTTTGATAAGCA-----TCAA------------------------------CTCC----TA--GACAAATAATGAATTTGGCAAGATGTCGGAATAGCTGAGAG-CACAG--CG-------GTT----CGAGACTTTTCCTCAACCGGAAAA-ATGTGAAAA-TTTTTT-----AAAAA--GCGGCTATGCCTCATCTAGTCAATTGCATTAATTTGACACTATCAACGTGGGAGGATTCA--------------SizeHit CountTotal NormTotal
No Reads
dm3
CG-----------------------------A------------AAGTT-------CG------------------------------CTCCACGTTA--GACAAATAATGAATTTGGCAAGATGTCGGAATAGCTGAGAG-CACAG--CG-------GAT----CGAACATTTT-ATCGTCCGAAAAA-ATGTGATTA-TTTTT------GAAAA--GCGGCTATGCCTCATCTAGTCAATTGCATTACTTTGACTCTATCAGCGTTGGA---------------------SizeHit CountTotal NormTotalGSM154618

Ovary		GSM154620

Ovary		GSM154621

Ovary		GSM154622

Ovary		GSM180328

Head		GSM180329

Mixed-body		GSM180330

Embryo		GSM180331

Embryo		GSM180332

Embryo		GSM180333

Embryo		GSM180334

Larvae		GSM180335

Disc		GSM180336

Pupae		GSM180337

S2		GSM239041

Head		GSM239050

Head		GSM239051

S2		GSM239052

S2		GSM246084

Head		GSM266765

S2		GSM280082

Ovary		GSM280083

Ovary		GSM280084

Ovary		GSM280085

Testis		GSM280086

Ovary		GSM280087

S2-NP		GSM280088

S2-NP		GSM312995

Head		GSM313160

Head		GSM313161

Head		GSM313162

Head		GSM313163

Head		GSM313164

Head		GSM313165

Head		GSM343287

Embryo		GSM379050

Ovary		GSM379051

Ovary		GSM379052

Ovary		GSM379053

Ovary		GSM379054

Ovary		GSM379055

Ovary		GSM379056

Ovary		GSM379057

Ovary		GSM379058

Ovary		GSM379059

Ovary		GSM379060

Ovary		GSM379061

Ovary		GSM379062

Ovary		GSM379063

Ovary		GSM379064

Ovary		GSM379065

Ovary		GSM379066

Ovary		GSM379067

Ovary		GSM424739

S2		GSM424740

S2		GSM424741

S2		GSM467729

Female-body		GSM467730

Female-body		GSM467731

Female-body		M002

CS		M003

Male-body		M004

Male-body		M005

ML-DmD32		M006

ML-DmD32		M029

OSC		M030

OSC		M031

OSC		M032

S2-R+		M033

S2-R+		M034

S2-R+		M035

S2-R+		M036

S2-R+		M037

S2-R+		M038

S2-R+		M039

S2-R+		M048

S2-R+		OSS2

OSS		OSS6

OSS		OSS7

OSS		OSS8

OSS		S1

Head		S10

Embryo		S11

Embryo		S12

Embryo		S13

Embryo		S14

Embryo		S15

S2-GMR		S16

Kc		S17

Larvae		S18

Larvae		S19

Pupae		S2

Head		S20

Pupae		S21

Disc		S22

Head		S23

Female-body		S24

Male-body		S25

Larvae		S26

Larvae		S27

Pupae		S28

Pupae		S29

Head		S3

Male-body		S30

S2-GMR		S31

S2		S32

S2		S33

Kc		S34

Kc		S35

Kc		S4

Female-body		S5

Disc		S6

Embryo		S7

Embryo		S8

S2		S9

Embryo		SRR001337

Head		SRR001338

Head		SRR001339

Head		SRR001340

Head		SRR001341

Head		SRR001342

Head		SRR001343

Head		SRR001344

Head		SRR001345

Head		SRR001346

Head		SRR001347

Head		SRR001348

Head		SRR001349

Head		SRR001664

Head		SRR010951

Ovary		SRR010952

Ovary		SRR010953

Ovary		SRR010954

Ovary		SRR010955

Ovary		SRR010956

Ovary		SRR010957

Ovary		SRR010958

Ovary		SRR010959

Ovary		SRR010960

Ovary		SRR014268

Embryo		SRR014269

Embryo		SRR014270

Embryo		SRR014271

Embryo		SRR014272

Embryo		SRR014273

Ovary		SRR014274

Ovary		SRR014275

Ovary		SRR014276

Ovary		SRR014277

Ovary		SRR014278

Ovary		SRR014279

Ovary		SRR014280

Ovary		SRR014281

Ovary		SRR014282

Ovary		SRR023197

S2		SRR023399

S2		SRR023400

S2		SRR023402

S2		SRR023407

S2		SRR029028

S2		SRR029029

S2		SRR029030

S2		SRR029031

S2		SRR029032

S2		SRR029033

S2		SRR029608

Head		SRR029633

Head		SRR030145

gb3		SRR031692

Head		SRR031693

Head		SRR031694

Head		SRR031696

Head		SRR031697

Head		SRR031698

Head		SRR031699

Head		SRR031700

Head		SRR031701

Head		SRR031702

Head		SRR031703

Head		SRR031704

Head		SRR032092

S2		SRR032093

S2		SRR032094

S2		SRR032095

S2-NP		SRR032096

S2-NP		SRR032152

Head		SRR060643

Testis		SRR060644

Ovary		SRR060645

Testis		SRR060646

Ovary		SRR060647

Ovary		SRR060648

Ovary		SRR060649

Ovary		SRR060650

Testis		SRR060651

Ovary		SRR060652

Testis		SRR060653

Ovary		SRR065151

Ovary		SRR065152

Ovary		SRR065153

Ovary		SRR065154

Ovary		SRR065155

Ovary		SRR065800

Ovary		SRR065801

Ovary		SRR065802

Ovary		SRR065803

Ovary		SRR065804

Ovary		SRR065805

Ovary		SRR065806

Ovary		SRR065807

Ovary		SRR097865

S2-NP		SRR097866

S2-NP		SRR097867

S2-NP		SRR298536

Ovary		SRR298537

Ovary		SRR298711

Ovary		SRR298712

Ovary		SRR317110

Ovary		SRR317111

Ovary		SRR317112

Ovary		SRR317113

Ovary		SRR317114

Ovary		SRR317115

Ovary		SRR317116

Ovary		SRR317117

Ovary		SRR341115

S2		SRR341116

S2		SRR341117

S2		SRR341118

S2		SRR351332

Mixed-body		SRR351333

Mixed-body		T004

OSC		T005

CME-L1		V001

Embryo		V002

Embryo		V003

S2		V006

Female-body		V007

Head		V008

S2		V009

CME-L1		V010

ML-DmD20-C5		V011

Sg4		V012

Male-body		V013

Head		V014

DTT		V015

DreRFHV		V018

Kc167		V019

GM2		V020

S2-R+		V021

ML-DmD21		V022

ML-DmD32		V023

Head		V024

Kc167		V025

S2-R+		V026

1182-2H		V027

ML-DmD21		V028

CME-W1-Cl.8+		V029

ML-DmD9		V030

ML-DmD8		V031

GM2		V032

S1		V033

CME-W1-Cl.8+		V034

ML-DmD16-C3		V035

ML-DmD32		V036

ML-DmD20-C5		V037

S2		V038

S2		V063

Ovary		V0632

Ovary		V064

Ovary		V0642

Ovary		V065

Ovary		V0652

Ovary		V066

Ovary		V0662

Ovary		V067

S2-NP		V073

mbn2		V074

S3		V075

ML-DmBG1-C1		V076

ML-DmBG3-C2		V077

Head		V078

Head		V079

Head		V080

Head		V081

Embryo		V082

Embryo		V083

Male-body		V084

Female-body		V085

CME-W2		V086

Female-body		V088

Ovary		V0882

Ovary		V089

Ovary		V0892

Ovary		V090

Male-body		V091

fGS/OSS		V092

Male-body		V093

Male-body		V094

S2-R+		V095

S2-R+		V096

Ovary		V097

Ovary		V098

Ovary		V125

ML-DmD9		V126

CME-L1		V127

G2		V128

S3		V129

ML-DmBG1-C1		V130

ML-DmBG3-C2		V131

ML-DmD16-C3		V132

ML-DmD32		V133

Sg4		V134

ML-DmD8		V135

CME-W2		V136

Male-body		V137

Head		V138

Male-body		V139

Female-body		V140

Female-body		V141

Female-body		V142

Female-body		V144

OSC		V145

S2		V146

S1		V147

1182-2H		V148

mbn2		GSM1528798

follicle cells
...................................................................................................................TGGCAAGATGTCGGAATAGCTGA..........................................................................................................................................................231164230.0016423000000251274211161600000108721051101101000001921820681135133516913918858252112181188250300238460101021621000000000000000000100293911787831012925547420165825643776641123661663692295053441697115563391614060063004024001021605950821166123174332277593764310147331940329031889333621000315004069010001057213115010600020292643207262063814415796193569225636251356213763181661215101109410121934207657144661044217857369542764238172003692630012729251154415411799213314460883782920179216441541054223005533907180210878121210374105480522298081923072082118265058746446956417115158326910871196123187231105556701842428726441721715850132327892632867181518701682184822146249
...................................................................................................................TGGCAAGATGTCGGAATAGCT............................................................................................................................................................21177695.007769500000706254330000000828235901100000001332282835195474918624015144153106278000256346100000000000000000000002091631130130391352412548525880188260163010421243201629147187010403021905027030401101220966911411195242102891878322532371253900000000100151601100446019010018100010291042285105525040012617135951714948108316611119101000282316355226381495718321687074188000262002042000192503221684228467301656124001301446243218200285221166639054163597202189702102279108982991090033019618113159555671752365722844306302111172157038761960117628031155301146671259425553146361523061272
...................................................................................................................TGGCAAGATGTCGGAATAGCTG...........................................................................................................................................................22168032.0068032000011022610548010000063920371010000000082981138068791292756937954564738715854100001392031000000000000000000010078455363901485218333357226423146125532280011141461940463213310110170180039010610001213815310174138189115226341243180432163249707022794100000000005901300751018160820051021125634914352891711143791323579625022636523138705108040000628519334434798111602043379733805828031301612200384384070305212234010792201921118811260157328524175002481982643392846336633522455017215841867571120124152135313095011545788273513890147416090319170125501764233074216012212373913897471377937102241112417
...................................................................................................................TGGCAAGATGTCGGAATAGCTGATC........................................................................................................................................................25114901.0014901000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001010000000000000000000000000010000000000000000000000000000000000000000000000001010000092215671000000000000000000000000000000000000001000000000000000000000002000000000000000000000010000000000
...................................................................................................................TGGCAAGATGTCGGAATAGC.............................................................................................................................................................20110370.0010370000000001000000000002314900000000001534668024527122491921000861290000000000000000000000010000003310010390022000000011200020010100000000000816200000304119203378249156122000000000000002010002010301100000059245320000720491321121180700210000024282922353112512761900008400121703110010373049162050112001028011142000151174229918235913904100881109088714012352683451923581286360003891426907002720301385261413548441664777200070
...................................................................................................................TGGCAAGATGTCGGAATAGCTGAATC-......................................................................................................................................................2619661.009661000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000066942967000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................TGGCAAGATGTCGGAATAGCTGAA.........................................................................................................................................................2418016.008016000010050120000000001113000000000000116454501062394676651000000000000000000000000000050179933001090003915006161400001131131110240000000000000100003616801335665438381911581110141627200000000000000000013000100000000120810380008295473582211664604100120000081272133360471462385141531863200001116580010705000003001100012300302001000001342357352174407282880100039714314465012722401705321501615002339508300001110102221520422924000000
.................................................................................................................TTTGGCAAGATGTCGGAATAGCT............................................................................................................................................................2316270.00627000000000010010000000691800000000000161410103081072109716153071000181000000000000000000000000000100030000160032002000040000120000000000000100000021317142019213332237327172517431800000000000100200000000002000001133181261850073274211100217210000000003448149142132818491072253382001010063390700010100013160060013006070100500012915693452544045531902000010044156211201554176132349127079120019157221213311013306013222645215496129200070
...................................................................................................................TGGCAAGATGTCGGAATAGCTGAT.........................................................................................................................................................2413726.0037260000010001000000000034000000000000181233044014525811110000000000000000000000000000211411002250020512101011000000600024010020000002000000000002260461107101311266103552000000000000000000200010010000005735412000223922875441177000200000194331338671255111205645300110483001190600000610340000440010300002000098639197281683722201000142419256458140265313160218510865501110215650100060010119159850465044000000
.................................................................................................................TTTGGCAAGATGTCGGAATAGC.............................................................................................................................................................2213119.0031190000000000000000000012038000000000001093220450115161143100037000000000000000000000000000000001000000000000000000010002000000000000000000010000247140131611726107652280000000000000000000000000000000022842800031027101001004000000000152311798945918118120001000012901300000350012900600400101000001000018522413320134161000200020103229177013236043132960681110026692221500171040122228682143111135000080
...................................................................................................................TGGCAAGATGTCGGAATAGCTGT..........................................................................................................................................................2311731.0017310000030001011000000001000000000000043021043220141436300000000000000000000000000000200310041901215182031003000012024001000000000100001000001010011113733105946710000000000011020001000002000000062221500028052123002026000020000151980589281121449100030001212020000060067005057002050011300007251182870563030001312821318700271645165838061470001735301100320005617341392744100010
...................................................................................................................TGGCAAGATGTCGGAATAGCTA...........................................................................................................................................................2211670.0016700000023102000000000014000000000000243011040042010021000000000000000000000000000009070100000000103002200000000101003000000001000000000101030379121825278804019100000000000000100010000010000000183100003134052044935000000000431710511423132140000282000100000010000000000000000000000000011106241602824474500000000036113016124333103700600166176000000000003014132079000000
...................................................................................................................TGGCAAGATGTCGGAATAGCTT...........................................................................................................................................................2211493.001493000000000000000000000102000000000001221200201000001000000000000000000000000000000020010000200000400000000000000100902000000000010000000000001110304215101000000000000000000000001000000002111155000150162000001100000000001322620000012000040000102100008007100000800002001000000112122031311400000712120577104536516860535600089401000110103399201744276101101010
............................................................................................................................................................................................................................GGCTATGCCTCATCTAGTCAAT..................................................2211171.00117100001230094230000000000400000000000000000000000000000000110000000000000000000000030272543401145417117463671432513331681826616018141026123216100000000000000000000000000000000002000000000000000000100010000000000000000000010000000000000000000110002201000000000000100000000000000000100000000000000000000000000000000000000200000000000000000000000010000000000
...................................................................................................................TGGCAAGATGTCGGAATAG..............................................................................................................................................................191925.009250000000000000000000010017000000000033120000060400046400000727400000000000000000000000000000030120100200021100000000000002000000000000000200100000000000312304000000000000130000010100010000002821320006070010001160100000086472911000001000000007302000002001000000400009000000000013715417016030007373977304154873401523000812000000200008514520171032000020
...................................................................................................................TGGCAAGATGTCGGAATAGCTGC..........................................................................................................................................................231898.008980000001000000000000011000000000000001151015920043181591200000000000000000000000000000000100000012000001101000010000003011010011000200001010000002133242230036000000000001000000000000000000002010000007000010000000000000024621004022000021007100000005001200202300000000100000334248390445000003851151111312441188223530241400065000000000001052813000000
...................................................................................................................TGGCAAGATGTCGGAATAGCTATC.........................................................................................................................................................243818.33245500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001835620000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................TGGCAAGATGTCGGAATAGCATC..........................................................................................................................................................231792.007920000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000560232000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................TGGCAAGATGTCGGAATAGCTGAAT........................................................................................................................................................251572.0057200000000000000000000000000000000000001100100000011000000000000000000000000000000000001000000010000000000000000000000000000000000000000001001248113002000002000000000000000000000000000000001003000000931052220020000000311534761041110001668000000000000000000000000000000000000007415123314000000010175010057111710320001129000000000005106442000000
.................................................................................................................TTTGGCAAGATGTCGGAATAGCATC..........................................................................................................................................................251429.004290000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000324105000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................TGGCAAGATGTCGGAATAGCTGAGA........................................................................................................................................................251367.0036700000000000000000000001000000000000000000010000011000000670000000000000000000000033010000000000000000000000000020000000000000000010102111420202065102200232600000000000000100001000000000000101202000044591090000000000021001518325550000000000000000000000000000000000000000000010702010000000101610001213134400100023916000000000000001101000000
...................................................................................................................TGGCAAGATGTCGGAATAGCA............................................................................................................................................................211348.00348000010000000000000000002000000000000000000000000000000000000000000000000000000000000000020000000000010100000000000000000000100000000000000000000100000000000000000000100000000200000000000010200001300000000000000000011850100001100001130000010000000020000000001000000000000537030100000115150010110133190111200031000000000005015017122829000000
.................................................................................................................TTTGGCAAGATGTCGGAATAG..............................................................................................................................................................211306.00306000000000000000000000201200000000002000110020000001000000350000000000000000000000000000002000000010001000000000000000000000000000000000001000020021131100700000000000000000001000001000000092100006030000000200000000026171601201111000000001100000003002000000100003000000000061184144140000000002211033638110430007900000000000100116937000000
...................................................................................................................TGGCAAGATGTCGGAATAGCTGAC.........................................................................................................................................................242296.005920000000000100000000000000000000000001020031000000110000000000000000000000000000000031000000000100000000000000000000000000000000000000012000000000114121403000000000000001000000000000000000000000007031050000000000000303824121423600001086300330100000000200000110000001000000021753002702500000211010161206626123120810002218400000300003075511000000
...................................................................................................................TGGCAAGATGTCGGAATAGCTGAGAG-......................................................................................................................................................261283.00283000000000000000000001110000000000000000101000000100000002310000000000000000000000000000000000000000000000000000000000000000000000000061500100142101100205000000000000000000000000000000000000000200060000401000000000500013001275100000000000000000000000000000000000000000000000000000000000001900000313206000000027412000000000000001305000000
...................................................................................................................TGGCAAGATGTCGGAATAGCTGG..........................................................................................................................................................231271.002710000000000000000000000000000000000001010005000201120100000000000000000000000000000000100010001000011310100000110330600001010000000000000000000010000201000000000000000000000010000000000000211000020000001020000000000211080001100100000000020100000200100000400000100000000044613320210000001320291303212416101112000410000000000001073130000000
............................................................................................................................................................................................................................GGCTATGCCTCATCTAGTCAA...................................................211260.0026000000000010020000000000000000000000000000000000000000000000000000000000000000000086016900103280050184221123708100014369312300000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................TGGCAAGATGTCGGAATAGCTGATT........................................................................................................................................................251250.0025000000000000000000000000000000000000010000010010010300000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000020010020000000000000000000000000000000010400002025200500000000000001120201402300001930000000000000001000001000000000000001118182900000210035000329716606100061010000010000213206574000000
...................................................................................................................TGGCAAGATGTCGGAATAGCTGAG.........................................................................................................................................................241235.0023500000000010000000000010000000000002011000200000000000000232400000000000000000000000000100010000100100000000001000000000000000000000000030300000204011310002000000000000000000000000010000001203100010103022112000000000222250234280000000000101000000000000000000100000000000230516140000004101330101197141010001710000000000001001010000000
.......................................................................................................................AAGATGTCGGAATAGCTGA..........................................................................................................................................................191219.002190000000000000000000002000000000000001000000001010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000320005338620001000000000000000000000000000000001022100000518000000000000000071221230000100000000000500000000000000000010000000000000041507115130000000000310010113003300042000000000000050000000000
..................................................................................................................TTGGCAAGATGTCGGAATAGCT............................................................................................................................................................221199.0019900000000000100000000020100000000000000000000010000000000110000000000000000000000020000000000000010000000000000000000000000000000000000000000000000110300200000000000000000000000000000000081300008090000001000000000011991000010000000000130000000300100000000010000000000002030402000000010192100230110010120004310000000000411556612000010
....................................................................................................................GGCAAGATGTCGGAATAGCTGA..........................................................................................................................................................221175.001750000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000010100000000000000000000000000000000000000050000000008101000000000000002000000002000100000003060000102300000000000000000013100021100000000000000000000000000000000000000000006253911311100000000033100023214202200046000000000003021243000000
.................................................................................................................TTTGGCAAGATGTCGGAATAGCTATC.........................................................................................................................................................261157.00157000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000012631000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................TTTGGCAAGATGTCGGAATAGCTA...........................................................................................................................................................241147.00147000000000000000000000000000000000000100100010000110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010104301300102100000000000000000000000000000000000200000000001111000000000000060027144000011000000000000000000000000000000000000141311718000000000300000232210000001613000000000000001113000000
...................................................................................................................TGGCAAGATGTCGGAATAGCC............................................................................................................................................................211140.00140000001000000006000000000000000000000000000000000000000000000000000000000000000000000000000001000000100000000000000000000000000100000000000000010000101000000000000000000100000000000000001101100010000000000000000000011050000000000000000120000000000000000000000000000000006482502000002000210108210011013800011000000000005063037000000
...................................................................................................................TGGCAAGATGTCGGAATA...............................................................................................................................................................181139.00139000000000000000000000001000000000000100100000000000000001070000000000000000000000000000000000000000000000000000000000000000000000001122800000100000000000007000000000000000000000010000000000110000050003900800000000000015700001000000000000100000000000000000000000000000000021411140000001100201020000001000012000000000000010010000000
..................................................................................................................TTGGCAAGATGTCGGAATAGCTG...........................................................................................................................................................231132.001320000000000000000000000000000000000000000010001010000000000000000000000000000000000000000000001000000000000000000100000000000000000000000000000001003010010000000000000000000000000000000005011000100000000000000000000154300370110000000039000000000000000001000000000000001005070200000000021310002259307100033000000000000002421000000
...................................................................................................................TGGCAAGATGTCGGAATAGCTGAAC........................................................................................................................................................251116.0011600000000000000000000000000000000000110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010020100000000000000000000000000000000000000000000000000000000000000000000002111120200004821000000000000000000000000000000000000121307000000000004100001071000000003000000000000000000000000
...................................................................................................................TGGCAAGATGTCGGAATAGCTGAGAG-C.....................................................................................................................................................271114.0011400000000000000000000000000000000000000000010001000000000120000000000000000000000000000000000000000000000000000000000000000000000010003120030000010232000000000000000000000000000000000000000000200000400050100000000020001014164300000000000000000000000000000000000000000000000000000000000050000003620000000206000000000000002022000000
...................................................................................................................TGGCAAGATGTCGGAATAGCG............................................................................................................................................................211112.00112000000000000000000000001000000000000000000000000100000000000000000000000000000000000000010000000000000000000000000100000000000000000000000000000000000000000000000000000100010000030000000000000010000000000000000000001050000000000000000200000000100200000000000100000000000402001000007870010001410301207800000000000000003020001000000
...................................................................................................................TGGCAAGATGTCGGAATAGCTC...........................................................................................................................................................221111.0011100000000000010000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010110100000000000010000000000000000000000420000022000000100000000000210200020000000710000010000010000000001000000000000001110504030000020203102021073404100011000000000003021100000000
...................................................................................................................TGGCAAGATGTCGGAATAGCTGTT.........................................................................................................................................................241102.001020000000000000000000000000000000000000000001000000000000000000000000000000000000000100000000000001000000000000000000000000000000000000000000000000200101000000000000000000000000000000000006020000000100000000000000000222100010010000010000000000001000000000000000000100001002020100000123001000203214077000000000000000014084513000000
....................................................................................................................GGCAAGATGTCGGAATAGCTG...........................................................................................................................................................21187.00870000000000000000000000010000000000001000000000000000000002000000000000000000000001000100000000000000000000000000000000000000000000000020000011000210010000000000000000000000000000100000001010000000000002000000000000136000030100000000001000000000000000000000000000000003180505020100000001110000201200300030000000000000012011000000
....................................................................................................................GGCAAGATGTCGGAATAGCT............................................................................................................................................................20185.0085000000000000000000000000000000000000000000000000000000001300000000000000000000000000000000000000000500000000000000000000000000000000000000000000000011000000000000000000000010100020000000101000000200000000000000000003500000000000000000000000001000000000000001000000000090405010000000001000010101204500002000000000002070632000000
.......................................................................................................................AAGATGTCGGAATAGCTG...........................................................................................................................................................18183.008300000000000000000000110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000310001120200000000000000000000000000000000000000000001000000020000000000071151500000000000000001000000000000000000000000000000000381501230000000000000000011101200000000000000000000000000000
............................................................................................................................................................................................................................GGCTATGCCTCATCTAGTCA....................................................20178.0078000000000100000000000000000000000000000000000000000000000200000000000000000000000100500031120041312110140110204101202200000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................TGGCAAGATGTCGGAATAGCTTC..........................................................................................................................................................23173.007300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000004018000100000001000000000000000000000000000101000000000010610010010000000000000000000000000000000000
.....................................................................................................................GCAAGATGTCGGAATAGCTGA..........................................................................................................................................................21173.00730000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003030000000000000000000000001000000000001000000201000000000000000000001100100010000000032000000000000000000000000000000004241115050000000001300000003000000000000000000000011200000000
....................................................................................................................GGCAAGATGTCGGAATAGCTGATC........................................................................................................................................................24172.007200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004824000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................GGCTATGCCTCATCTAGTCAAA..................................................22168.00680000000000000000000000000000000000000000000000000000000000000000000000000000000000006100934003136200302700121011100100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................TTGGCAAGATGTCGGAATAGC.............................................................................................................................................................21166.00660000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000001000000000000000000000000000000000001010000000000000000000000000032000000000000000000000000010011000000000000000000000000040300000000002010004103041000021000000000040131313000000
........................................................................................................................AGATGTCGGAATAGCTGA..........................................................................................................................................................18165.00650000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000001000000100001301000000000000000000000000000000000000000000000100000050000000000005135100010000000000010000000000000000000000000000000001130113030000000001110000011002300000000000000000020000000000
......................................................................................................................CAAGATGTCGGAATAGCTGA..........................................................................................................................................................20162.0062000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000100230220000000000000000000000000000000000000601000010030000101000000000131101003030000000000100000000000000000000000000000000060201110000000000000000012001000021000000000000020200000000
........................................................................................................................AGATGTCGGAATAGCTGAA.........................................................................................................................................................19150.005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000794201000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................TGGCAAGATGTCGGAATAGCTTT..........................................................................................................................................................23149.0049000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000001001100000000000000000000000002200000000000000000100000000000000000000000000000000010001000000010200000050000205200001000000000009043020000010
...................................................................................................................TGGCAAGATGTCGGAATAGCTGAAG........................................................................................................................................................25245.0090000000000000000000000100000000000010000000000000001000000000000000000000000000000000000000000000000000000001000100100000000000000000003000001032000000000000000000000000000000000000000000000200000080100020000000000200112005022000000000000000000000000000000000000000000022408060000000006100010236000000023000000000000000010000000
.................................................................................................................TTTGGCAAGATGTCGGAATAGCTT...........................................................................................................................................................24142.0042000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000001000000000020000000000000002020010021103300032000000100002082300000000
..................................................................................................................TTGGCAAGATGTCGGAATAGCTGATC........................................................................................................................................................26141.004100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002021000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................TGGCAAGATGTCGGAATAGCTGCA.........................................................................................................................................................24140.0040000000000000000000000100000000000000000000000000011010000000000000000000000000000000100000000000000010000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000100000001000000010000100000000000000000000000000000000030400130000021008000001031000100010000000000000000000000000
...................................................................................................................TGGCAAGATGTCGGAATAGCTAT..........................................................................................................................................................23140.00400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000247001000000000000000000000000000000000000011000000000000000000000000000002000000000002000000000000
.................................................................................................................TTTGGCAAGATGTCGGAAT................................................................................................................................................................19138.0038000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000010000000000000000000012300000000000000000000000000000000000000002000000000000011000000000000000030001000100000100000000007062113000000
...................................................................................................................TGGCAAGATGTCGGAATAGA.............................................................................................................................................................20138.00380000000000000000000000000000000000100000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000010000000000000001000000000000000000000000000000000000100000000000200000011000000100006043112000000
.......................................................................................................................AAGATGTCGGAATAGCT............................................................................................................................................................17137.003700000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030191500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................TGGCAAGATGTCGGAATAGCTGTC.........................................................................................................................................................24235.507100000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000004125000000000000000000000000000000000000000000000000000000001000001100000000000000000000000000000000
...................................................................................................................TGGCAAGATGTCGGAATAGCAT...........................................................................................................................................................22135.00350000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000710000000000000000000000000000000000000200010000000001000000000000001000000000000000014021221000000
...................................................................................................................TGGCAAGATGTCGGAATAGCTAC..........................................................................................................................................................23135.00350000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000256000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
droSim2
AA--AGT--GCC----CTTTTGAGTGTTTTGA------------AAGTT-------CG------------------------------CTCCTCGTTA--GACAAATAATGAATTTGGCAAGATGTCGGAATAGCTGAGAG-CACAG--CG-------GAT----CGAGCCTCTT-ATCGTCCGAAAAA-ATGTGATTA-TTTTT------GAAAA--GCGGCTATGCCTCATCTAGTCAATTGCATTACTTTGACGCTATCAACGTTGGA---------------------SizeHit CountTotal NormTotalM023

Head		M024

Male-body		M025

Embryo		M053

Female-body		O001

Testis		O002

Head		SRR553485

Ovary		SRR553486

Ovary		SRR553487

Ovary		SRR553488

Ovary		SRR618934

Ovary		V044

Embryo		SRR902008

Ovary		SRR902009

Testis		SRR1275487

Male larvae		SRR1275485

Male prepupae		SRR1275483

Male prepupae
...................................................................................................................TGGCAAGATGTCGGAATAGCTGA..........................................................................................................................................................23164763.00647639594223511373101980513070132186708890499284845211851101
...................................................................................................................TGGCAAGATGTCGGAATAGCT............................................................................................................................................................21136080.003608016088892527210130216966519643731570232491163376812690610
...................................................................................................................TGGCAAGATGTCGGAATAGCTG...........................................................................................................................................................22125744.00257447627414811320290722273770237780469466682822740151
...................................................................................................................TGGCAAGATGTCGGAATAGCTGAA.........................................................................................................................................................24110228.00102282422746001525985396222171234885201101
.................................................................................................................TTTGGCAAGATGTCGGAATAGCT............................................................................................................................................................2315394.0053941995825441780513344508290242825993311
...................................................................................................................TGGCAAGATGTCGGAATAGC.............................................................................................................................................................2014613.0046133115501167332576444635536717065912385836
...................................................................................................................TGGCAAGATGTCGGAATAGCTA...........................................................................................................................................................2211320.00132007114001209528416130057929000
...................................................................................................................TGGCAAGATGTCGGAATAGCTGAT.........................................................................................................................................................2411224.0012243361031003702692351431831528000
.................................................................................................................TTTGGCAAGATGTCGGAATAGC.............................................................................................................................................................2211028.0010282284157480203129169621102024
...................................................................................................................TGGCAAGATGTCGGAATAGCC............................................................................................................................................................211901.009011265523200001000010000
...................................................................................................................TGGCAAGATGTCGGAATAGCTGG..........................................................................................................................................................231652.006524126493100119310301000
...................................................................................................................TGGCAAGATGTCGGAATAG..............................................................................................................................................................191353.00353230238728563761328224116
...................................................................................................................TGGCAAGATGTCGGAATAGCTGT..........................................................................................................................................................231334.00334036200483043359252101012
...................................................................................................................TGGCAAGATGTCGGAATAGCG............................................................................................................................................................211300.0030022166620068000000000
...................................................................................................................TGGCAAGATGTCGGAATA...............................................................................................................................................................181299.00299060024130450310000000
.................................................................................................................TTTGGCAAGATGTCGGAATAGCC............................................................................................................................................................231257.0025705819900000000000000
...................................................................................................................TGGCAAGATGTCGGAATAGCTT...........................................................................................................................................................221256.0025621086400219106302757021
...................................................................................................................TGGCAAGATGTCGGAATAGCTGAAT........................................................................................................................................................251244.002441212000634590301000000
...................................................................................................................TGGCAAGATGTCGGAATAGCA............................................................................................................................................................211201.002010176110064210037000
..................................................................................................................TTGGCAAGATGTCGGAATAGCT............................................................................................................................................................221175.0017521033810074730216001
.................................................................................................................TTTGGCAAGATGTCGGAATAGCTA...........................................................................................................................................................241137.001370150001713522600230000
..................................................................................................................TTGGCAAGATGTCGGAATAGCTG...........................................................................................................................................................231126.0012603240105274101267000
...................................................................................................................TGGCAAGATGTCGGAATAGCTGATT........................................................................................................................................................251121.0012108280004631331001000
.......................................................................................................................AAGATGTCGGAATAGCTGA..........................................................................................................................................................191120.001200111000234791100000
...................................................................................................................TGGCAAGATGTCGGAATAGCTGAC.........................................................................................................................................................242112.0022401054100664330144110000
...................................................................................................................TGGCAAGATGTCGGAATAGCTGC..........................................................................................................................................................23187.0087051000012162291416001
.................................................................................................................TTTGGCAAGATGTCGGAATAG..............................................................................................................................................................21181.008101614109122241117110
.................................................................................................................TTTGGCAAGATGTCGGAATAGCG............................................................................................................................................................23174.00741185400010000000000
....................................................................................................................GGCAAGATGTCGGAATAGCT............................................................................................................................................................20170.00700232100013010018030
....................................................................................................................GGCAAGATGTCGGAATAGCTGA..........................................................................................................................................................22158.00580318120002532022009
..................................................................................................................TTGGCAAGATGTCGGAATAGC.............................................................................................................................................................21150.0050029701053211001000
...................................................................................................................TGGCAAGATGTCGGAATAGCTGAGA........................................................................................................................................................25149.00490010109132021020000
...................................................................................................................TGGCAAGATGTCGGAATAGCTGAG.........................................................................................................................................................24144.0044002050871061041000
............................................................................................................................................................................................................................GGCTATGCCTCATCTAGTCAA...................................................21143.00430001303011250000000
...................................................................................................................TGGCAAGATGTCGGAATAGCTGAAC........................................................................................................................................................25141.00410040003321100000000
..................................................................................................................TTGGCAAGATGTCGGAATAGCTGA..........................................................................................................................................................24137.0037012500100110035000
....................................................................................................................GGCAAGATGTCGGAATAGCTG...........................................................................................................................................................21136.00360101010004020241011
.......................................................................................................................AAGATGTCGGAATAGCTG...........................................................................................................................................................18133.0033000000001230000000
...................................................................................................................TGGCAAGATGTCGGAATAGCTGAAG........................................................................................................................................................25229.005800200017519112011000
........................................................................................................................AGATGTCGGAATAGCTGA..........................................................................................................................................................18127.0027022000131116100000
...................................................................................................................TGGCAAGATGTCGGAATAGA.............................................................................................................................................................20127.0027123020010000000000
.....................................................................................................................GCAAGATGTCGGAATAGCTGA..........................................................................................................................................................21127.0027011510033220000000
...................................................................................................................TGGCAAGATGTCGGAATAGCTGAGAG-......................................................................................................................................................26126.002600000059821010000
.................................................................................................................TTTGGCAAGATGTCGGAATAGCA............................................................................................................................................................23125.002502200062841000000
.................................................................................................................TTTGGCAAGATGTCGGAATAGCTT...........................................................................................................................................................24124.002404200033450003000
...................................................................................................................TGGCAAGATGTCGGAAT................................................................................................................................................................17123.0023000000126410000000
........................................................................................................................AGATGTCGGAATAGCTG...........................................................................................................................................................17122.0022000000100021000000
...................................................................................................................TGGCAAGATGTCGGAATAGCTGTT.........................................................................................................................................................24120.002005200003100045000
...................................................................................................................TGGCAAGATGTCGGAATAGCAA...........................................................................................................................................................22119.001908000010720001000
............................................................................................................................................................................................................................GGCTATGCCTCATCTAGTCAAT..................................................22119.0019000131012110000000
.................................................................................................................TTTGGCAAGATGTCGGAAT................................................................................................................................................................19118.0018015100000200000000
.......................................................................................................................AAGATGTCGGAATAGCT............................................................................................................................................................17116.0016000000010015000000
......................................................................................................................CAAGATGTCGGAATAGCTGA..........................................................................................................................................................20116.001601400032132000000
.....................................................................................................................GCAAGATGTCGGAATAGCT............................................................................................................................................................19116.0016010500000001000000
...................................................................................................................TGGCAAGATGTCGGAA.................................................................................................................................................................16115.001500000046203000000
...................................................................................................................TGGCAAGATGTCGGAATAGCTTT..........................................................................................................................................................23114.001406200002000013000
.........................................................................................................................GATGTCGGAATAGCTGA..........................................................................................................................................................17113.001300000008203000000
...................................................................................................................TGGCAAGATGTCGGAATAGCTAT..........................................................................................................................................................23112.001200000001210080000
.......................................................................................................................AAGATGTCGGAATAGCTGAA.........................................................................................................................................................20112.001200000000219000000
...................................................................................................................TGGCAAGATGTCGGAATAGCTGAGAG-C.....................................................................................................................................................27111.001100000056000000000
......................................................................................................................CAAGATGTCGGAATAGCT............................................................................................................................................................18111.001107200010100000000
...................................................................................................................TGGCAAGATGTCGGA..................................................................................................................................................................15110.001000000001045000000
..................................................................................................................TTGGCAAGATGTCGGAATAGCC............................................................................................................................................................22110.001007300000000000000
.................................................................................................................TTTGGCAAGATGTCGGAA.................................................................................................................................................................1819.00905202000000000000
...................................................................................................................TGGCAAGATGTCGGAATAGCTGCA.........................................................................................................................................................2419.00900200020310010000
.........................................................................................................................GATGTCGGAATAGCTG...........................................................................................................................................................1619.00900000000405000000
............................................................................................................................................................................................................................GGCTATGCCTCATCTAGTCAAA..................................................2218.00800010000250000000
...................................................................................................................TGGCAAGATGTCGGAATAGCTGTA.........................................................................................................................................................2418.00800000020210012000
..........................................................................................................................ATGTCGGAATAGCTGA..........................................................................................................................................................1618.00800000010403000000
....................................................................................................................GGCAAGATGTCGGAATAGCTGG..........................................................................................................................................................2218.00802500010000000000
...................................................................................................................TGGCAAGATGTCGGAATAGCTGACT........................................................................................................................................................2527.001400200074100000000
.................................................................................................................TTTGGCAAGATGTCGGAATAGCAA...........................................................................................................................................................2417.00700200001130000000
..................................................................................................................TTGGCAAGATGTCGGAATAGCTGG..........................................................................................................................................................2417.00700700000000000000
....................................................................................................................GGCAAGATGTCGGAATAGC.............................................................................................................................................................1917.00701022000001000001
...................................................................................................................TGGCAAGATGTCGGAATT...............................................................................................................................................................1817.00707000000000000000
........................................................................................................................AGATGTCGGAATAGCT............................................................................................................................................................1616.00600000000105000000
............................................................................................................................................................................................................................GGCTATGCCTCATCTAGTCA....................................................2016.00600000001320000000
.....................................................................................................................GCAAGATGTCGGAATAGCTG...........................................................................................................................................................2016.00601020000101000010
....................................................................................................................GGCAAGATGTCGGAATAGCTGAA.........................................................................................................................................................2316.00601100000100021000
...................................................................................................................TGGCAAGATGTCGGAATAGCTC...........................................................................................................................................................2215.00501000021000001000
...................................................................................................................TGGCAAGATGTCGGAATAGCTGAGT........................................................................................................................................................2515.00500000011200010000
...................................................................................................................TGGCAAGATGTCGGAATAGCGA...........................................................................................................................................................2215.00500000021100001000
...................................................................................................................TGGCAAGATGTCGGAATAGCTGAACA-......................................................................................................................................................2615.00500000021200000000
droSec2
AA--AGT--GCC----CTT-TGAGTGTTTTGA------------AAGTT-------TG------------------------------CTCCTCGTTA--GACAAATAATGAATTTGGCAAGATGTCGGAATAGCTGAGAG-CACAG--CG-------GAT----CGAGCCTCTT-ATCGTCCGAAAAA-ATGTGATTA-TTTTT------GAAAA--GCGGCTATGCCTCATCTAGTCAATTGCATTACTTTGACGCTATCAACGTTGGA---------------------SizeHit CountTotal NormTotalM054

Female-body		V113

Male-body		V114

Embryo		V115

Head
...................................................................................................................TGGCAAGATGTCGGAATAGCTGA..........................................................................................................................................................23111072.0011072239039604504218
...................................................................................................................TGGCAAGATGTCGGAATAGCT............................................................................................................................................................2118857.00885722635591717286
...................................................................................................................TGGCAAGATGTCGGAATAGCTG...........................................................................................................................................................2216390.00639030222287935146
...................................................................................................................TGGCAAGATGTCGGAATAGC.............................................................................................................................................................2011411.00141126210466241
.................................................................................................................TTTGGCAAGATGTCGGAATAGCT............................................................................................................................................................231907.009071774552669
.................................................................................................................TTTGGCAAGATGTCGGAATAGC.............................................................................................................................................................221443.00443593086016
...................................................................................................................TGGCAAGATGTCGGAATAGCTT...........................................................................................................................................................221357.003578326626
....................................................................................................................GGCAAGATGTCGGAATAGCTG...........................................................................................................................................................211242.00242240200
....................................................................................................................GGCAAGATGTCGGAATAGCT............................................................................................................................................................201213.00213210300
....................................................................................................................GGCAAGATGTCGGAATAGCTGA..........................................................................................................................................................221212.00212209210
...................................................................................................................TGGCAAGATGTCGGAATAG..............................................................................................................................................................191186.001868981133
...................................................................................................................TGGCAAGATGTCGGAATAGCTGAA.........................................................................................................................................................241178.001785727886
...................................................................................................................TGGCAAGATGTCGGAATAGCTGT..........................................................................................................................................................231166.001666479203
...................................................................................................................TGGCAAGATGTCGGAATAGCTGAT.........................................................................................................................................................241156.001562779464
..................................................................................................................TTGGCAAGATGTCGGAATAGCT............................................................................................................................................................22155.0055252091
.................................................................................................................TTTGGCAAGATGTCGGAATAG..............................................................................................................................................................21142.0042251601
............................................................................................................................................................................................................................GGCTATGCCTCATCTAGTCAAT..................................................22134.003434000
.....................................................................................................................GCAAGATGTCGGAATAGCTG...........................................................................................................................................................20128.002826200
...................................................................................................................TGGCAAGATGTCGGAATAGCA............................................................................................................................................................21127.0027131400
...................................................................................................................TGGCAAGATGTCGGAATAGCTGATT........................................................................................................................................................25123.002311480
..................................................................................................................TTGGCAAGATGTCGGAATAGCTG...........................................................................................................................................................23123.002356120
.....................................................................................................................GCAAGATGTCGGAATAGCTGA..........................................................................................................................................................21121.002117130
...................................................................................................................TGGCAAGATGTCGGAATAGCTGAC.........................................................................................................................................................24219.503979212
...................................................................................................................TGGCAAGATGTCGGAATAGCTGG..........................................................................................................................................................23117.00179440
.......................................................................................................................AAGATGTCGGAATAGCTGA..........................................................................................................................................................19116.00162770
...................................................................................................................TGGCAAGATGTCGGAATAGCTGC..........................................................................................................................................................23116.001621040
....................................................................................................................GGCAAGATGTCGGAATAGC.............................................................................................................................................................19116.001615010
..................................................................................................................TTGGCAAGATGTCGGAATAGC.............................................................................................................................................................21116.001651100
...................................................................................................................TGGCAAGATGTCGGAATAGCTGTT.........................................................................................................................................................24115.001531110
...................................................................................................................TGGCAAGATGTCGGAATAGCTA...........................................................................................................................................................22114.00146530
...................................................................................................................TGGCAAGATGTCGGAATAGCG............................................................................................................................................................21113.001313000
...................................................................................................................TGGCAAGATGTCGGAATAGCTGAAT........................................................................................................................................................25112.00120570
....................................................................................................................GGCAAGATGTCGGAATAGCTT...........................................................................................................................................................21112.001211100
.................................................................................................................TTTGGCAAGATGTCGGAAT................................................................................................................................................................19112.00128310
............................................................................................................................................................................................................................GGCTATGCCTCATCTAGTCAA...................................................21111.001111000
...................................................................................................................TGGCAAGATGTCGGAATAGA.............................................................................................................................................................20111.00112900
....................................................................................................................GGCAAGATGTCGGAATAG..............................................................................................................................................................18111.001111000
.....................................................................................................................GCAAGATGTCGGAATAGCT............................................................................................................................................................19110.001010000
.................................................................................................................TTTGGCAAGATGTCGGAATAGCTT...........................................................................................................................................................2419.0092520
...................................................................................................................TGGCAAGATGTCGGAATAGCTTT..........................................................................................................................................................2319.0093600
......................................................................................................................CAAGATGTCGGAATAGCTGA..........................................................................................................................................................2019.0095130
...................................................................................................................TGGCAAGATGTCGGAATAGCC............................................................................................................................................................2118.0081700
..................................................................................................................TTGGCAAGATGTCGGAATAGCTGA..........................................................................................................................................................2417.0074120
....................................................................................................................GGCAAGATGTCGGAATAGCTGT..........................................................................................................................................................2215.0055000
............................................................................................................................................................................................................................GGCTATGCCTCATCTAGTCA....................................................2015.0055000
...............................................................................................................................................................................................................................TATGCCTCATCTAGTCAATTG................................................2115.0054100
.................................................................................................................TTTGGCAAGATGTCGGAATAGCTA...........................................................................................................................................................2415.0053011
....................................................................................................................GGCAAGATGTCGGAATAGCTA...........................................................................................................................................................2114.0044000
...................................................................................................................TGGCAAGATGTCGGAATAGCTC...........................................................................................................................................................2214.0042110
......................................................................................................................CAAGATGTCGGAATAGCT............................................................................................................................................................1814.0044000
...................................................................................................................TGGCAAGATGTCGGAATAGCTGACT........................................................................................................................................................2523.5070160
...................................................................................................................TGGCAAGATGTCGGAATAGCTGTTT........................................................................................................................................................2513.0031110
..................................................................................................................TTGGCAAGATGTCGGAATAG..............................................................................................................................................................2013.0031200
...................................................................................................................TGGCAAGATGTCGGAATA...............................................................................................................................................................1813.0033000
....................................................................................................................GGCAAGATGTCGGAATAGCTGAT.........................................................................................................................................................2313.0032010
............................................................................................................................................................................................................................GGCTATGCCTCATCTAGTC.....................................................1913.0033000
...................................................................................................................TGGCAAGATGTCGGAATAGCAT...........................................................................................................................................................2213.0030300
.................................................................................................................TTTGGCAAGATGTCGGAATAGCA............................................................................................................................................................2313.0030210
...................................................................................................................TGGCAAGATGTCGGAATAGT.............................................................................................................................................................2013.0030300
...................................................................................................................TGGCAAGATGTCGGAATAGCTTTT.........................................................................................................................................................2412.0020200
....................................................................................................................GGCAAGATGTCGGAATAGCA............................................................................................................................................................2012.0022000
.................................................................................................................TTTGGCAAGATGTCGGAATT...............................................................................................................................................................2012.0020200
..............................................................................................................................................................................................................................CTATGCCTCATCTAGTCAAT..................................................2012.0021010
.....................................................................................................................GCAAGATGTCGGAATAGCTGAA.........................................................................................................................................................2212.0021010
.............................................................................................................................................................................................................................GCTATGCCTCATCTAGTCAAT..................................................2112.0022000
........................................................................................................................AGATGTCGGAATAGCTGA..........................................................................................................................................................1812.0020020
............................................................................................................................................................................................A-ATGTGATTA-TTTTT------GAAAA--GC........................................................................2212.0020020
......................................................................................................................CAAGATGTCGGAATAGCTG...........................................................................................................................................................1912.0022000
.................................................................................................................TTTGGCAAGATGTCGGAATAGCC............................................................................................................................................................2312.0020200
....................................................................................................................GGCAAGATGTCGGAATAGCTGAA.........................................................................................................................................................2312.0022000
...................................................................................................................TGGCAAGATGTCGGAATAGCTGAG.........................................................................................................................................................2412.0020020
.................................................................................................................TTTGGCAAGATGTCGGAATAGT.............................................................................................................................................................2212.0021100
...................................................................................................................TGGCAAGATGTCGGAATAGCTGAAG........................................................................................................................................................2521.5031020
droYak3
GT-----GT--T----------------TTGAATGTC-------TCGTT-------TT------------------------------CTCCTCGTTA--GACAAATAATGAATTTGGCAAGATGTCGGAATAGCTGAGAG-CACAG--CG-------GAT----CGAGCCTTTG-ATCGTCCGAAAAA-ATGTGAATA-TTTTT------TAAAA--GCGGCTATGCCTCATCTAGTCAATTGCATTACTTTGACTCTATCAGCGTTGGAGGCT-----------------SizeHit CountTotal NormTotalM026

Head		M043

Female-body		M056

Embryo		V046

Embryo		V052

Head		V058

Head		V120

Male-body		SRR1275488

Male larvae		SRR1275486

Male prepupae		SRR1275484

Male prepupae		GSM1528802

follicle cells
...................................................................................................................TGGCAAGATGTCGGAATAGCTGA..........................................................................................................................................................2317511.0075114620842330380347225111914210
...................................................................................................................TGGCAAGATGTCGGAATAGCT............................................................................................................................................................2115012.0050126251398280161652215896183530
...................................................................................................................TGGCAAGATGTCGGAATAGCTG...........................................................................................................................................................2213805.003805820843264732661146266640
...................................................................................................................TGGCAAGATGTCGGAATAGC.............................................................................................................................................................201849.008498515421633336111220
.................................................................................................................TTTGGCAAGATGTCGGAATAGCT............................................................................................................................................................231709.0070912313930318161085150
....................................................................................................................GGCAAGATGTCGGAATAGCTG...........................................................................................................................................................211263.002630259100020010
...................................................................................................................TGGCAAGATGTCGGAATAGCTT...........................................................................................................................................................221241.00241158520121341010
.................................................................................................................TTTGGCAAGATGTCGGAATAGC.............................................................................................................................................................221230.00230433165112791070
...................................................................................................................TGGCAAGATGTCGGAATAGCTGT..........................................................................................................................................................231214.0021419913345890000
....................................................................................................................GGCAAGATGTCGGAATAGCTGA..........................................................................................................................................................221193.001930191100100000
...................................................................................................................TGGCAAGATGTCGGAATAGCC............................................................................................................................................................211156.001565709800010000
....................................................................................................................GGCAAGATGTCGGAATAGCT............................................................................................................................................................201145.001450143000000020
...................................................................................................................TGGCAAGATGTCGGAATAGCTGAT.........................................................................................................................................................241137.0013764126100630000
...................................................................................................................TGGCAAGATGTCGGAATAGCTGAA.........................................................................................................................................................241103.0010354419331210007
.................................................................................................................TTTGGCAAGATGTCGGAATAGCC............................................................................................................................................................23194.00941108300000000
..................................................................................................................TTGGCAAGATGTCGGAATAGCT............................................................................................................................................................22175.007518326200160010
...................................................................................................................TGGCAAGATGTCGGAATAG..............................................................................................................................................................19171.00710330000310160
............................................................................................................................................................................................................................GGCTATGCCTCATCTAGTCAAT..................................................22162.0062060200000000
..................................................................................................................TTGGCAAGATGTCGGAATAGCTG...........................................................................................................................................................23148.00481152230070000
...................................................................................................................TGGCAAGATGTCGGAATAGCTGTT.........................................................................................................................................................24135.00352151010160000
...................................................................................................................TGGCAAGATGTCGGAATAGCTTT..........................................................................................................................................................23132.00321191100100000
.................................................................................................................TTTGGCAAGATGTCGGAATAG..............................................................................................................................................................21122.0022015000070000
..................................................................................................................TTGGCAAGATGTCGGAATAGC.............................................................................................................................................................21121.002178000050010
...................................................................................................................TGGCAAGATGTCGGAATAGCTGG..........................................................................................................................................................23121.002164540020000
...................................................................................................................TGGCAAGATGTCGGAATAGCTGATT........................................................................................................................................................25120.0020211000160000
...................................................................................................................TGGCAAGATGTCGGAATAGCTGC..........................................................................................................................................................23118.001800440550000
.................................................................................................................TTTGGCAAGATGTCGGAATAGCTT...........................................................................................................................................................24115.001507000080000
.....................................................................................................................GCAAGATGTCGGAATAGCTG...........................................................................................................................................................20114.0014014000000000
...................................................................................................................TGGCAAGATGTCGGAATAGCTGTTT........................................................................................................................................................25113.001336000040000
....................................................................................................................GGCAAGATGTCGGAATAGC.............................................................................................................................................................19112.0012012000000000
.....................................................................................................................GCAAGATGTCGGAATAGCTGA..........................................................................................................................................................21112.001207210020000
...................................................................................................................TGGCAAGATGTCGGAATAGCTA...........................................................................................................................................................22112.001206100140000
..................................................................................................................TTGGCAAGATGTCGGAATAGCTGA..........................................................................................................................................................24111.001124400010000
....................................................................................................................GGCAAGATGTCGGAATAGCTT...........................................................................................................................................................21111.0011011000000000
............................................................................................................................................................................................................................GGCTATGCCTCATCTAGTCAA...................................................21111.0011011000000000
...................................................................................................................TGGCAAGATGTCGGAATAGCTGAC.........................................................................................................................................................24210.5021041600010000
.......................................................................................................................AAGATGTCGGAATAGCTGA..........................................................................................................................................................1918.00802200040000
....................................................................................................................GGCAAGATGTCGGAATAGCTGT..........................................................................................................................................................2218.00808000000000
...................................................................................................................TGGCAAGATGTCGGAATAGCG............................................................................................................................................................2118.00870100000000
..................................................................................................................TTGGCAAGATGTCGGAATAGCC............................................................................................................................................................2217.00740300000000
............................................................................................................................................................................................................................GGCTATGCCTCATCTAGTCA....................................................2016.00606000000000
...................................................................................................................TGGCAAGATGTCGGAATAGCTTTT.........................................................................................................................................................2416.00602000040000
...................................................................................................................TGGCAAGATGTCGGAATAGCTC...........................................................................................................................................................2215.00500200030000
.....................................................................................................................GCAAGATGTCGGAATAGCT............................................................................................................................................................1915.00505000000000
.................................................................................................................TTTGGCAAGATGTCGGAATAGCG............................................................................................................................................................2315.00550000000000
.................................................................................................................TTTGGCAAGATGTCGGAATAGAC............................................................................................................................................................2315.00510400000000
...................................................................................................................TGGCAAGATGTCGGAATAGCA............................................................................................................................................................2114.00410000030000
...................................................................................................................TGGCAAGATGTCGGAATAGCTGCT.........................................................................................................................................................2414.00400000010003
..................................................................................................................TTGGCAAGATGTCGGAATAG..............................................................................................................................................................2014.00403000010000
...................................................................................................................TGGCAAGATGTCGGAATAGCTGAG.........................................................................................................................................................2413.00300100110000
......................................................................................................................CAAGATGTCGGAATAGCTG...........................................................................................................................................................1913.00302100000000
....................................................................................................................GGCAAGATGTCGGAATAGCTGAA.........................................................................................................................................................2313.00303000000000
...................................................................................................................TGGCAAGATGTCGGAATAGCTGAAT........................................................................................................................................................2513.00301000020000
....................................................................................................................GGCAAGATGTCGGAATAGCTGAT.........................................................................................................................................................2313.00303000000000
.......................................................................................................................AAGATGTCGGAATAGCTG...........................................................................................................................................................1813.00303000000000
.............................................................................................................................................................................................................................GCTATGCCTCATCTAGTCAAT..................................................2113.00303000000000
................................................................................................................ATTTGGCAAGATGTCGGAATAGC.............................................................................................................................................................2312.00201100000000
.................................................................................................................TTTGGCAAGATGTCGGAATAGA.............................................................................................................................................................2212.00210100000000
.................................................................................................................TTTGGCAAGATGTCGGAATAGCA............................................................................................................................................................2312.00201000010000
............................................................................................................................................................................................................................GGCTATGCCTCATCTAGTC.....................................................1912.00202000000000
...................................................................................................................TGGCAAGATGTCGGAATA...............................................................................................................................................................1812.00201010000000
...................................................................................................................TGGCAAGATGTCGGAATAGT.............................................................................................................................................................2012.00200200000000
...................................................................................................................TGGCAAGATGTCGGAATAGCTGATTT-......................................................................................................................................................2621.50301000020000
droEre2
AA---GT--GCC----CTT--AAGTGTTCCGC------------AAGTT-------CG------------------------------CTCCTCGTTA--GACAAATAATGAATTTGGCAAGATGTCGGAATAGCTGAGAG-CACAG--CG-------GAT----CGAGCCTCTT-ATCGTCCGAAAAA-ATGTGAATA-TTTTT------GAAAA--GCGGCTATGCCTCATCTAGTCAATTGCATTACTTTGACACTATCAACGTTGGA---------------------SizeHit CountTotal NormTotalM055

Female-body		M057

Embryo		V060

Head		V040

Embryo		V107

Male-body		V108

Head		GSM1528801

follicle cells
...................................................................................................................TGGCAAGATGTCGGAATAGCTGA..........................................................................................................................................................2316496.0064962115183551323389444178
...................................................................................................................TGGCAAGATGTCGGAATAGCTG...........................................................................................................................................................2216200.0062003526326333226025036
...................................................................................................................TGGCAAGATGTCGGAATAGCT............................................................................................................................................................2115721.00572121302031832722600
...................................................................................................................TGGCAAGATGTCGGAATAGC.............................................................................................................................................................201716.007161911752468330
.................................................................................................................TTTGGCAAGATGTCGGAATAGCT............................................................................................................................................................231611.0061114817312403280
...................................................................................................................TGGCAAGATGTCGGAATAGCTT...........................................................................................................................................................221390.00390162020204220
...................................................................................................................TGGCAAGATGTCGGAATAGCTGT..........................................................................................................................................................231296.00296133011142118
....................................................................................................................GGCAAGATGTCGGAATAGCTG...........................................................................................................................................................211279.00279275000400
.................................................................................................................TTTGGCAAGATGTCGGAATAGC.............................................................................................................................................................221256.0025639512195140
....................................................................................................................GGCAAGATGTCGGAATAGCTGA..........................................................................................................................................................221198.001981750004118
..................................................................................................................TTGGCAAGATGTCGGAATAGCT............................................................................................................................................................221164.001645300110190
....................................................................................................................GGCAAGATGTCGGAATAGCT............................................................................................................................................................201148.00148145000300
...................................................................................................................TGGCAAGATGTCGGAATAGCTGAT.........................................................................................................................................................241136.001363111186124
...................................................................................................................TGGCAAGATGTCGGAATAG..............................................................................................................................................................19189.0089370005020
..................................................................................................................TTGGCAAGATGTCGGAATAGCTG...........................................................................................................................................................23179.0079290104810
...................................................................................................................TGGCAAGATGTCGGAATAGCTGAA.........................................................................................................................................................24177.0077372103142
..................................................................................................................TTGGCAAGATGTCGGAATAGC.............................................................................................................................................................21138.003841003030
.................................................................................................................TTTGGCAAGATGTCGGAATAG..............................................................................................................................................................21136.0036190001700
...................................................................................................................TGGCAAGATGTCGGAATAGCTGTT.........................................................................................................................................................24130.0030180001020
...................................................................................................................TGGCAAGATGTCGGAATAGCTGATT........................................................................................................................................................25127.002730012210
...................................................................................................................TGGCAAGATGTCGGAATAGCTTT..........................................................................................................................................................23126.002680001710
............................................................................................................................................................................................................................GGCTATGCCTCATCTAGTCAAT..................................................22124.002422200000
.................................................................................................................TTTGGCAAGATGTCGGAATAGCTT...........................................................................................................................................................24123.002360001520
...................................................................................................................TGGCAAGATGTCGGAATAGCG............................................................................................................................................................21122.002222000000
....................................................................................................................GGCAAGATGTCGGAATAGCTGAT.........................................................................................................................................................23118.001850000013
....................................................................................................................GGCAAGATGTCGGAATAGC.............................................................................................................................................................19117.001716000100
.....................................................................................................................GCAAGATGTCGGAATAGCTGA..........................................................................................................................................................21116.001613000120
.....................................................................................................................GCAAGATGTCGGAATAGCTG...........................................................................................................................................................20114.001414000000
....................................................................................................................GGCAAGATGTCGGAATAGCTT...........................................................................................................................................................21113.001313000000
...................................................................................................................TGGCAAGATGTCGGAATAGCTGC..........................................................................................................................................................23113.00131001533
...................................................................................................................TGGCAAGATGTCGGAATAGCTA...........................................................................................................................................................22112.00129000300
.................................................................................................................TTTGGCAAGATGTCGGAATAGCC............................................................................................................................................................23111.001101000010
...................................................................................................................TGGCAAGATGTCGGAATAGCTGG..........................................................................................................................................................23111.00115011220
....................................................................................................................GGCAAGATGTCGGAATAGCTGT..........................................................................................................................................................22110.00109100000
.....................................................................................................................GCAAGATGTCGGAATAGCT............................................................................................................................................................19110.00107000210
...................................................................................................................TGGCAAGATGTCGGAATAGCA............................................................................................................................................................21110.00103000700
...................................................................................................................TGGCAAGATGTCGGAATAGCTGAAT........................................................................................................................................................2519.0094000500
...................................................................................................................TGGCAAGATGTCGGAATAGCC............................................................................................................................................................2119.0092210400
...................................................................................................................TGGCAAGATGTCGGAATAGCTGAC.........................................................................................................................................................2428.50176200810
............................................................................................................................................................................................................................GGCTATGCCTCATCTAGTCA....................................................2018.0088000000
..................................................................................................................TTGGCAAGATGTCGGAATAGCTGT..........................................................................................................................................................2417.0073000400
..................................................................................................................TTGGCAAGATGTCGGAATAG..............................................................................................................................................................2017.0077000000
...................................................................................................................TGGCAAGATGTCGGAATAGCTC...........................................................................................................................................................2216.0064000200
...................................................................................................................TGGCAAGATGTCGGAATAGCTGTTT........................................................................................................................................................2516.0064000200
............................................................................................................................................................................................................................GGCTATGCCTCATCTAGTCAA...................................................2115.0055000000
..................................................................................................................TTGGCAAGATGTCGGAATAGCTGA..........................................................................................................................................................2414.0042000200
...................................................................................................................TGGCAAGATGTCGGAATAGCTGTA.........................................................................................................................................................2414.0042000200
......................................................................................................................CAAGATGTCGGAATAGCTG...........................................................................................................................................................1914.0044000000
.......................................................................................................................AAGATGTCGGAATAGCTGA..........................................................................................................................................................1914.0040000310
...................................................................................................................TGGCAAGATGTCGGAATAGCTGACT........................................................................................................................................................2524.0081000430
.................................................................................................................TTTGGCAAGATGTCGGAAT................................................................................................................................................................1913.0032000100
.....................................................................................................................GCAAGATGTCGGAATAGCTT...........................................................................................................................................................2013.0033000000
............................................................................................................................................................................................................................GGCTATGCCTCATCTAGTC.....................................................1913.0033000000
......................................................................................................................CAAGATGTCGGAATAGCTGA..........................................................................................................................................................2013.0031000200
...................................................................................................................TGGCAAGATGTCGGAATAGCTGAG.........................................................................................................................................................2413.0030010101
...................................................................................................................TGGCAAGATGTCGGAATAGT.............................................................................................................................................................2012.0021000100
........................................................................................................................AGATGTCGGAATAGCTGA..........................................................................................................................................................1812.0021010000
.....................................................................................................................GCAAGATGTCGGAATAGC.............................................................................................................................................................1812.0021000100
.......................................................................................................................AAGATGTCGGAATAGCTG...........................................................................................................................................................1812.0021000100
....................................................................................................................GGCAAGATGTCGGAATAGCTGTT.........................................................................................................................................................2312.0022000000
..................................................................................................................TTGGCAAGATGTCGGAATAGCTT...........................................................................................................................................................2312.0021000100
.................................................................................................................TTTGGCAAGATGTCGGAATAGCA............................................................................................................................................................2312.0021000010
....................................................................................................................GGCAAGATGTCGGAATAG..............................................................................................................................................................1812.0022000000
...................................................................................................................TGGCAAGATGTCGGAATAGCTGATTT-......................................................................................................................................................2621.5030000300
dp5
GT-----GT--GCGTGT--------GTGTGCG------------TGTGT-------G------------------------------TGTCC-----T--GACAAATAATGAATTTGGCAAGATGTCGGAATAGCTGAGAG-CAAAA--AG--------------------------------------------AAGA-TGATTT-----GAAAT--GCGGCTATGCCTCATCTAGTCAATTGCATTCATTTGATTCTATCAACGATGAA---------------------SizeHit CountTotal NormTotalM022

Male-body		M040

Female-body		M059

Embryo		M062

Head		V043

Embryo		V051

Head		V112

Male-body		SRR902010

Ovary		SRR902011

Testis		SRR902012

CNS imaginal disc
...................................................................................................................TGGCAAGATGTCGGAATAGCTGA..........................................................................................................................................................23110068.0010068813244583345422389025664310
...................................................................................................................TGGCAAGATGTCGGAATAGCT............................................................................................................................................................2116373.0063733053543274513101209522420
...................................................................................................................TGGCAAGATGTCGGAATAGCTG...........................................................................................................................................................2214304.0043041254065237124853478141
...................................................................................................................TGGCAAGATGTCGGAATAGC.............................................................................................................................................................2011118.0011183646849921633412030
...................................................................................................................TGGCAAGATGTCGGAATAGCTGT..........................................................................................................................................................231549.00549025353101211711480
....................................................................................................................GGCAAGATGTCGGAATAGCT............................................................................................................................................................201317.00317031501001000
...................................................................................................................TGGCAAGATGTCGGAATAGCTT...........................................................................................................................................................221302.003024203010286060
...................................................................................................................TGGCAAGATGTCGGAATAG..............................................................................................................................................................191229.002291205000117050
....................................................................................................................GGCAAGATGTCGGAATAGCTG...........................................................................................................................................................211214.00214020900001040
....................................................................................................................GGCAAGATGTCGGAATAGCTGA..........................................................................................................................................................221111.00111010600000050
...................................................................................................................TGGCAAGATGTCGGAATAGCTGTT.........................................................................................................................................................24176.00760331001170240
...................................................................................................................TGGCAAGATGTCGGAATAGCTGAT.........................................................................................................................................................24167.00670283036170100
...................................................................................................................TGGCAAGATGTCGGAATAGCTGAA.........................................................................................................................................................24245.0090113402030670
....................................................................................................................GGCAAGATGTCGGAATAGC.............................................................................................................................................................19139.003903900000000
...................................................................................................................TGGCAAGATGTCGGAATAGCTGTTT........................................................................................................................................................25129.002901600008050
...................................................................................................................TGGCAAGATGTCGGAATAGCTTT..........................................................................................................................................................23126.002611800007000
..................................................................................................................TTGGCAAGATGTCGGAATAGCT............................................................................................................................................................22125.002541400016000
...................................................................................................................TGGCAAGATGTCGGAATAGCC............................................................................................................................................................21124.002430712002000
....................................................................................................................GGCAAGATGTCGGAATAGCTGT..........................................................................................................................................................22124.002402400000000
.....................................................................................................................GCAAGATGTCGGAATAGCT............................................................................................................................................................19122.002212100000000
...................................................................................................................TGGCAAGATGTCGGAATAGCTGATT........................................................................................................................................................25120.00202600106050
...................................................................................................................TGGCAAGATGTCGGAATAGCTGG..........................................................................................................................................................23120.00200420912020
............................................................................................................................................................................................................................GGCTATGCCTCATCTAGTCAAT..................................................22120.002001631000000
....................................................................................................................GGCAAGATGTCGGAATAGCTT...........................................................................................................................................................21118.001801800000000
...................................................................................................................TGGCAAGATGTCGGAATAGCTGC..........................................................................................................................................................23115.00150131523000
...................................................................................................................TGGCAAGATGTCGGAATAGCA............................................................................................................................................................21113.00131800004000
.....................................................................................................................GCAAGATGTCGGAATAGCTGA..........................................................................................................................................................21113.001311200000000
....................................................................................................................GGCAAGATGTCGGAATAG..............................................................................................................................................................18113.001301300000000
............................................................................................................................................................................................................................GGCTATGCCTCATCTAGTCA....................................................20112.001201200000000
.................................................................................................................TTTGGCAAGATGTCGGAATAGCT............................................................................................................................................................23111.00110600104000
.....................................................................................................................GCAAGATGTCGGAATAGCTG...........................................................................................................................................................20111.001101100000000
..................................................................................................................TTGGCAAGATGTCGGAATAGC.............................................................................................................................................................2119.0090600012000
..................................................................................................................TTGGCAAGATGTCGGAATAGCTG...........................................................................................................................................................2319.0090600101010
...................................................................................................................TGGCAAGATGTCGGAATA...............................................................................................................................................................1818.0080800000000
...................................................................................................................TGGCAAGATGTCGGAATAGCTGAGA........................................................................................................................................................2517.0070100001050
......................................................................................................................CAAGATGTCGGAATAGCT............................................................................................................................................................1816.0060500010000
...................................................................................................................TGGCAAGATGTCGGAATAGCTGAC.........................................................................................................................................................2416.0060210002010
...................................................................................................................TGGCAAGATGTCGGAATAGCTA...........................................................................................................................................................2215.0050400001000
....................................................................................................................GGCAAGATGTCGGAATAGCTGTT.........................................................................................................................................................2315.0050500000000
...................................................................................................................TGGCAAGATGTCGGAATTT..............................................................................................................................................................1915.0050500000000
...................................................................................................................TGGCAAGATGTCGGAATAGT.............................................................................................................................................................2015.0050500000000
.......................................................................................................................AAGATGTCGGAATAGCTGA..........................................................................................................................................................1915.0050000201020
...................................................................................................................TGGCAAGATGTCGGAATAGA.............................................................................................................................................................2014.0040100003000
...................................................................................................................TGGCAAGATGTCGGAATAGCTC...........................................................................................................................................................2214.0040110002000
...................................................................................................................TGGCAAGATGTCGGAATAGCTGAGAG-C.....................................................................................................................................................2714.0040000000040
............................................................................................................................................................................................................................GGCTATGCCTCATCTAGTCAA...................................................2113.0030300000000
.................................................................................................................TTTGGCAAGATGTCGGAATAG..............................................................................................................................................................2113.0030300000000
............................................................................................................................................................................................................................GGCTATGCCTCATCTAGTC.....................................................1913.0030300000000
...................................................................................................................TGGCAAGATGTCGGAATAGCTTG..........................................................................................................................................................2313.0030200100000
..................................................................................................................TTGGCAAGATGTCGGAATAGCTGA..........................................................................................................................................................2413.0030300000000
.............................................................................................................................................................................................................................GCTATGCCTCATCTAGTCA....................................................1913.0030300000000
...................................................................................................................TGGCAAGATGTCGGAATAGCTGTC.........................................................................................................................................................2413.0030000000030
......................................................................................................................CAAGATGTCGGAATAGCTG...........................................................................................................................................................1913.0030300000000
......................................................................................................................CAAGATGTCGGAATAGCTGA..........................................................................................................................................................2013.0030200000010
.................................................................................................................TTTGGCAAGATGTCGGAATAGC.............................................................................................................................................................2213.0030200001000
.....................................................................................................................GCAAGATGTCGGAATAGC.............................................................................................................................................................1813.0030300000000
...................................................................................................................TGGCAAGATGTCGGAATAT..............................................................................................................................................................1912.0020200000000
...................................................................................................................TGGCAAGATGTCGGAATAGCTGAG.........................................................................................................................................................2412.0020000000020
...................................................................................................................TGGCAAGATGTCGGAAT................................................................................................................................................................1712.0020000000020
...................................................................................................................TGGCAAGATGTCGGAATAGCTGACT........................................................................................................................................................2512.0020100000010
..................................................................................................................TTGGCAAGATGTCGGAATAG..............................................................................................................................................................2012.0020200000000
.......................................................................................................................AAGATGTCGGAATAGCTG...........................................................................................................................................................1812.0020200000000
...................................................................................................................TGGCAAGATGTCGGAATAGCTGATG........................................................................................................................................................2521.5030000000030
...................................................................................................................TGGCAAGATGTCGGAATAGCTGAAC........................................................................................................................................................2521.5030000000030
...................................................................................................................TGGCAAGATGTCGGAATAGCTGAAT........................................................................................................................................................2521.5030000000030
.................................................................................................................TTTGGCAAGATGTCGGAATAGCTG...........................................................................................................................................................2411.0010100000000
..................................................................................................................TTGGCAAGATGTCGGAATAGCC............................................................................................................................................................2211.0010010000000
...................................................................................................................TGGCAAGATGTCGGAATAGCTGTAT........................................................................................................................................................2521.0020000000020
....................................................................................................................GGCAAGATGTCGGAATAGCTGTTT........................................................................................................................................................2411.0010100000000
droPer2
TGT----GT--GTGTGC----------GTGC-----------------------------------------------GTGTGTGTGTGTCC-----T--GACAAATAATGAATTTGGCAAGATGTCGGAATAGCTGAGAG-CAAAA--AG--------------------------------------------AAGA-TGATTT-----GAAAT--GCGGCTATGCCTCATCTAGTCAATTGCATTCATTTGATTCTATCAACGATGAA---------------------SizeHit CountTotal NormTotalM021

Embryo		M042

Female-body		V042

Embryo		V050

Head		V057

Head		V111

Male-body
...................................................................................................................TGGCAAGATGTCGGAATAGCT............................................................................................................................................................2111046.00104619545151722356
...................................................................................................................TGGCAAGATGTCGGAATAGCTG...........................................................................................................................................................221737.007374497272713169
...................................................................................................................TGGCAAGATGTCGGAATAGCTGA..........................................................................................................................................................231717.00717148151582021319
...................................................................................................................TGGCAAGATGTCGGAATAGC.............................................................................................................................................................201211.002111004014165
...................................................................................................................TGGCAAGATGTCGGAATAGCTGT..........................................................................................................................................................23155.005503321316
....................................................................................................................GGCAAGATGTCGGAATAGCT............................................................................................................................................................20155.00550540001
....................................................................................................................GGCAAGATGTCGGAATAGCTG...........................................................................................................................................................21154.00540530001
...................................................................................................................TGGCAAGATGTCGGAATAGCTGG..........................................................................................................................................................23135.00353401000
...................................................................................................................TGGCAAGATGTCGGAATAGCTT...........................................................................................................................................................22134.003401502215
....................................................................................................................GGCAAGATGTCGGAATAGCTGA..........................................................................................................................................................22119.00190190000
...................................................................................................................TGGCAAGATGTCGGAATAG..............................................................................................................................................................19118.0018390105
...................................................................................................................TGGCAAGATGTCGGAATAGCC............................................................................................................................................................21114.00141300100
...................................................................................................................TGGCAAGATGTCGGAATAGCTGAT.........................................................................................................................................................24111.0011610004
...................................................................................................................TGGCAAGATGTCGGAATAGCTGATT........................................................................................................................................................25110.0010410005
...................................................................................................................TGGCAAGATGTCGGAATAGCTGAA.........................................................................................................................................................24210.00201620101
............................................................................................................................................................................................................................GGCTATGCCTCATCTAGTCAAT..................................................2217.007070000
...................................................................................................................TGGCAAGATGTCGGAATAGCG............................................................................................................................................................2115.005400010
.....................................................................................................................GCAAGATGTCGGAATAGCTGA..........................................................................................................................................................2115.005230000
...................................................................................................................TGGCAAGATGTCGGAATAGCTGTT.........................................................................................................................................................2415.005040001
.......................................................................................................................AAGATGTCGGAATAGCTGA..........................................................................................................................................................1914.004400000
..................................................................................................................TTGGCAAGATGTCGGAATAGCT............................................................................................................................................................2214.004030001
.....................................................................................................................GCAAGATGTCGGAATAGCTG...........................................................................................................................................................2014.004130000
...................................................................................................................TGGCAAGATGTCGGAATAGCTGAC.........................................................................................................................................................2413.003300000
...................................................................................................................TGGCAAGATGTCGGAATAGCTGAGA........................................................................................................................................................2513.003300000
.................................................................................................................TTTGGCAAGATGTCGGAATAGCT............................................................................................................................................................2313.003000003
...................................................................................................................TGGCAAGATGTCGGAATAGCTTT..........................................................................................................................................................2313.003030000
....................................................................................................................GGCAAGATGTCGGAATAGC.............................................................................................................................................................1913.003030000
.....................................................................................................................GCAAGATGTCGGAATAGCT............................................................................................................................................................1913.003020100
..................................................................................................................TTGGCAAGATGTCGGAATAGCTG...........................................................................................................................................................2313.003210000
...................................................................................................................TGGCAAGATGTCGGAATAGCTGAGAG-CA....................................................................................................................................................2812.002200000
...................................................................................................................TGGCAAGATGTCGGAATAGCTGAGAG-C.....................................................................................................................................................2712.002200000
...................................................................................................................TGGCAAGATGTCGGAATAGCTGC..........................................................................................................................................................2312.002100100
...................................................................................................................TGGCAAGATGTCGGAATT...............................................................................................................................................................1812.002010010
....................................................................................................................GGCAAGATGTCGGAATAGCTGT..........................................................................................................................................................2212.002020000
...................................................................................................................TGGCAAGATGTCGGAATAGCTGAGG........................................................................................................................................................2512.002200000
...................................................................................................................TGGCAAGATGTCGGAATAGCTC...........................................................................................................................................................2212.002020000
..............................................................................................................................................................................................................................CTATGCCTCATCTAGTCAAT..................................................2011.001001000
...................................................................................................................TGGCAAGATGTCGGAATAGCA............................................................................................................................................................2111.001000010
...................................................................................................................TGGCAAGATGTCGGAATAGCTGAGAG-......................................................................................................................................................2611.001000001
..................................................................................................................TTGGCAAGATGTCGGAATAGC.............................................................................................................................................................2111.001010000
....................................................................................................................GGCAAGATGTCGGAATAGCTT...........................................................................................................................................................2111.001010000
....................................................................................................................GGCAAGATGTCGGAATAGCTTT..........................................................................................................................................................2211.001010000
......................................................................................................................CAAGATGTCGGAATAGCT............................................................................................................................................................1811.001010000
...................................................................................................................TGGCAAGATGTCGGAATAGCTGAG.........................................................................................................................................................2411.001010000
...................................................................................................................TGGCAAGATGTCGGAATA...............................................................................................................................................................1811.001010000
............................................................................................................................................................................................................................GGCTATGCCTCATCTAGTCAA...................................................2111.001010000
...................................................................................................................TGGCAAGATGTCGGAATAGCTGACT........................................................................................................................................................2511.001000001
...........................................................................................................................................AG-CAAAA--AG--------------------------------------------AAGA-TGATTT-----GAAAT--GC........................................................................2611.001100000
....................................................................................................................GGCAAGATGTCGGAATAG..............................................................................................................................................................1811.001010000
...................................................................................................................TGGCAAGATGTCGGAATAGCGA...........................................................................................................................................................2211.001000001
....................................................................................................................GGCAAGATGTCGGAATAGCTGATT........................................................................................................................................................2411.001010000
...................................................................................................................TGGCAAGATGTCGGAATAGCTA...........................................................................................................................................................2211.001010000
...................................................................................................................TGGCAAGATGTCGGAATAGCTACC.........................................................................................................................................................2420.501000001
...................................................................................................................TGGCAAGATGTCGGAATAGCTGTA.........................................................................................................................................................2420.501000001
...................................................................................................................TGGCAAGATGTCGGAATAGCTGCA.........................................................................................................................................................2420.501100000
droWil2
AG-----GA--T----C------------AC-----------------------------------------------GAATGTG---AT----G-AA--AACAACTAGTGGATTTGGCAAGATGTCGGAATAGCTGAAAGTCACACAAAA-TCATAAAATGTTTGCCGTTTTGTT----------ATTGTTGTGAATT-TTATTGATTTCAAAAATTACGGCTATGCCTCATCTAGTCAATTGCATTAGTTTGA-------------------------------------SizeHit CountTotal NormTotalM020

Head		M045

Female-body		V117

Male-body		V118

Embryo		V119

Head
...................................................................................................................TGGCAAGATGTCGGAATAGCTGA..........................................................................................................................................................2316319.00631931100718453172264
...................................................................................................................TGGCAAGATGTCGGAATAGCT............................................................................................................................................................2113291.0032915561013147420345
...................................................................................................................TGGCAAGATGTCGGAATAGCTG...........................................................................................................................................................2212039.002039798055045547
...................................................................................................................TGGCAAGATGTCGGAATAGC.............................................................................................................................................................201729.00729981943923015
....................................................................................................................GGCAAGATGTCGGAATAGCT............................................................................................................................................................201111.001111108101
....................................................................................................................GGCAAGATGTCGGAATAGCTGA..........................................................................................................................................................22197.0097094021
...................................................................................................................TGGCAAGATGTCGGAATAG..............................................................................................................................................................19185.00851671502
....................................................................................................................GGCAAGATGTCGGAATAGCTG...........................................................................................................................................................21176.0076075001
...................................................................................................................TGGCAAGATGTCGGAATAGCTGAA.........................................................................................................................................................24169.006992117220
...................................................................................................................TGGCAAGATGTCGGAATAGCTGT..........................................................................................................................................................23164.00640232984
...................................................................................................................TGGCAAGATGTCGGAATAGCTT...........................................................................................................................................................22161.00615213023
...................................................................................................................TGGCAAGATGTCGGAATAGCTGAT.........................................................................................................................................................24246.509372040224
...................................................................................................................TGGCAAGATGTCGGAATAGCC............................................................................................................................................................21136.0036360000
............................................................................................................................................................................................................................GGCTATGCCTCATCTAGTCAAT..................................................22115.0015015000
...................................................................................................................TGGCAAGATGTCGGAATAGCTGAC.........................................................................................................................................................24111.001105240
...................................................................................................................TGGCAAGATGTCGGAATAGCTGAAA........................................................................................................................................................25110.001011350
....................................................................................................................GGCAAGATGTCGGAATAG..............................................................................................................................................................1819.00909000
....................................................................................................................GGCAAGATGTCGGAATAGC.............................................................................................................................................................1919.00909000
...................................................................................................................TGGCAAGATGTCGGAATAGCTGG..........................................................................................................................................................2318.00860110
...................................................................................................................TGGCAAGATGTCGGAATAGCTGC..........................................................................................................................................................2318.00800350
...................................................................................................................TGGCAAGATGTCGGAATAGCA............................................................................................................................................................2118.00803500
............................................................................................................................................................................................................................GGCTATGCCTCATCTAGTCAA...................................................2118.00808000
.....................................................................................................................GCAAGATGTCGGAATAGCTGA..........................................................................................................................................................2117.00724100
...................................................................................................................TGGCAAGATGTCGGAATAGCG............................................................................................................................................................2117.00770000
...................................................................................................................TGGCAAGATGTCGGAATAGCTGATT........................................................................................................................................................2526.501301642
..................................................................................................................TTGGCAAGATGTCGGAATAGCTGA..........................................................................................................................................................2416.00602013
.....................................................................................................................GCAAGATGTCGGAATAGCT............................................................................................................................................................1916.00605010
............................................................................................................................................................................................................................GGCTATGCCTCATCTAGTCA....................................................2016.00606000
.................................................................................................................TTTGGCAAGATGTCGGAATAGCT............................................................................................................................................................2316.00606000
.....................................................................................................................GCAAGATGTCGGAATAGCTG...........................................................................................................................................................2015.00505000
........................................................................................................................AGATGTCGGAATAGCTGA..........................................................................................................................................................1815.00530020
....................................................................................................................GGCAAGATGTCGGAATAGCTGT..........................................................................................................................................................2214.00404000
......................................................................................................................CAAGATGTCGGAATAGCT............................................................................................................................................................1814.00413000
...................................................................................................................TGGCAAGATGTCGGAATAGCTGAAAGT......................................................................................................................................................2714.00440000
...................................................................................................................TGGCAAGATGTCGGAATAGCTGTT.........................................................................................................................................................2424.00813310
...................................................................................................................TGGCAAGATGTCGGAATAGCTGAAT........................................................................................................................................................2514.00402110
......................................................................................................................CAAGATGTCGGAATAGCTGA..........................................................................................................................................................2013.00303000
....................................................................................................................GGCAAGATGTCGGAATAGCTT...........................................................................................................................................................2113.00303000
...................................................................................................................TGGCAAGATGTCGGAATA...............................................................................................................................................................1813.00301020
....................................................................................................................GGCAAGATGTCGGAATAGCTGAA.........................................................................................................................................................2313.00303000
.................................................................................................................TTTGGCAAGATGTCGGAATAGC.............................................................................................................................................................2213.00301200
....................................................................................................................GGCAAGATGTCGGAATAGCTGAT.........................................................................................................................................................2322.50505000
...................................................................................................................TGGCAAGATGTCGGAATAGCTGACT........................................................................................................................................................2512.00202000
...................................................................................................................TGGCAAGATGTCGGAATAGCTGAAAA.......................................................................................................................................................2612.00201010
...............................................................................................................................................................................................................................TATGCCTCATCTAGTCAAT..................................................1912.00201010
...................................................................................................................TGGCAAGATGTCGGAATAGCTGAG.........................................................................................................................................................2412.00202000
.......................................................................................................................AAGATGTCGGAATAGCTG...........................................................................................................................................................1812.00202000
..................................................................................................................TTGGCAAGATGTCGGAATAGCTG...........................................................................................................................................................2312.00202000
.......................................................................................................................AAGATGTCGGAATAGCTGA..........................................................................................................................................................1912.00200110
............................................................................................................................................................................................................................GGCTATGCCTCATCTAGTC.....................................................1912.00202000
...................................................................................................................TGGCAAGATGTCGGAATAGCTGAGT........................................................................................................................................................2512.00200101
..................................................................................................................TTGGCAAGATGTCGGAATAGCC............................................................................................................................................................2211.00110000
...............................................................................................................................................................ATGTTTGCCGTTTTGTT----------ATT.......................................................................................................2011.00100010
...................................................................................................................TGGCAAGATGTCGGAATAGA.............................................................................................................................................................2011.00101000
............................................................................................................................................................................................................................GGCTATGCCTCATCTAGTCAAA..................................................2211.00101000
................................................................................................................................................................................................................................ATGCCTCATCTAGTCAAT..................................................1811.00100010
...................................................................................................................TGGCAAGATGTCGGAATAGCTGAAAG.......................................................................................................................................................2611.00100100
...................................................................................................................TGGCAAGATGTCGGAATAGCTTT..........................................................................................................................................................2311.00100100
..................................................................................................................TTGGCAAGATGTCGGAATAGC.............................................................................................................................................................2111.00100010
.................................................................................................................TTTGGCAAGATGTCGGAATAG..............................................................................................................................................................2111.00101000
.............................................................................................................................................................................................................................GCTATGCCTCATCTAGTCA....................................................1911.00101000
..................................................................................................................TTGGCAAGATGTCGGAATAGCT............................................................................................................................................................2211.00101000
............................................................................................................................................................................................................................GGCTATGCCTCATCTAGTCAATT.................................................2311.00101000
..............................................................................GAATGTG---AT----G-AA--AACAACTAGTGGATT.................................................................................................................................................................................2711.00100010
droVir3
TG----TGA--T------------TGCTT-----A---ACTGAAAAGTC-------CTGCCAGCACCATTTGCAGCACATATATATAAAT-----ATA--GACAAATAATGAATTTGGCAAGATGTCGGAATAGCTGAGAG-CACAA--AG-TCATA-AAT----CCAGAATTTCT----------ATT-TTGTGTATTTTTATTGA----GTACA--GCGGCTATGCCTCATCTAGTCAATTGCATTCATTTGACA-----------------------------------SizeHit CountTotal NormTotalM027

Male-body		M028

Head		M047

Female-body		M061

Embryo		SRR060654

Ovary		SRR060655

Testis		SRR060656

Ovary		SRR060657

Testis		SRR060658

Ovary		SRR060659

Testis		SRR060660

Ovary		SRR060661

Embryo		SRR060662

Embryo		SRR060663

Embryo		SRR060664

Male-body		SRR060665

Female-body		SRR060666

Male-body		SRR060667

Female-body		SRR060668

Male-body		SRR060669

Female-body		SRR060670

Testis		SRR060671

Male-body		SRR060672

Female-body		SRR060673

Ovary		SRR060674

Ovary		SRR060675

Ovary		SRR060676

Ovary		SRR060677

Ovary		SRR060678

Testis		SRR060679

Testis		SRR060680

Testis		SRR060681

Testis		SRR060682

Embryo		SRR060683

Testis		SRR060684

Embryo		SRR060685

Embryo		SRR060686

Embryo		SRR060687

Embryo		SRR060688

Ovary		SRR060689

Testis		SRR1106712

embryo_0-2h		SRR1106713

embryo_0-2h		SRR1106714

embryo_2-4h		SRR1106715

embryo_4-6h		SRR1106716

embryo_4-6h		SRR1106717

embryo_6-8h		SRR1106718

embryo_6-8h		SRR1106719

embryo_8-10h		SRR1106720

embryo_8-10h		SRR1106721

embryo_10-12h		SRR1106722

embryo_10-12h		SRR1106723

embryo_12-14h		SRR1106724

embryo_12-14h		SRR1106725

embryo_14-16h		SRR1106726

embryo_14-16h		SRR1106727

larvae		SRR1106728

larvae		SRR1106729

mixed whole adult body		SRR1106730

embryo_16-30h		V047

Embryo		V053

Head		V116

Male-body		GSM1528803

follicle cells		SRR2096013

Ovary_Strain_9_oxidized		SRR2096014

Ovary_Strain_160_oxidized		SRR2096026

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096038

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096050

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096055

Ovary_Min_43		SRR2096056

Ovary_Min_46		SRR2096057

Ovary_Min_50		SRR2096058

Ovary_Min_98		SRR2096059

Ovary_Min_164		SRR2096060

Ovary_Min_193		SRR2096061

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096072

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096079

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096080

embryo_0-2h from 15to16 day old nondysgenic mothers		SRR2096081

embryo_0-2h from 15to16 day old nondysgenic mothers
...................................................................................................................TGGCAAGATGTCGGAATAGCTGA..........................................................................................................................................................2319975.00997513546463052192322210416400010304351552866016252113034531249055510076425111600001181527282340626935265313182086020171517510785171325264863
...................................................................................................................TGGCAAGATGTCGGAATAGCT............................................................................................................................................................2118448.0084481667781362501626124111371000652214385213200111115930077174091000022141560000000151231048451174281023370412131314616431102114141179
...................................................................................................................TGGCAAGATGTCGGAATAGCTG...........................................................................................................................................................2215552.0055521321055850169014982260000721242954110190619136462522660902881001435901000000000100198814681491601844321110608172934
...................................................................................................................TGGCAAGATGTCGGAATAGC.............................................................................................................................................................2011358.001358277141503504039117000010000101000100914310070000014002000000043171131438385257200005000131201016517
...................................................................................................................TGGCAAGATGTCGGAATAGCTGT..........................................................................................................................................................231307.003074069216100200001111007301002092341608000001200000000000000030724110501301000000001212
...................................................................................................................TGGCAAGATGTCGGAATAGCTGAT.........................................................................................................................................................241299.0029934145130401601000002011000100000071541606000009000000000100010114101007700000000000002313
...................................................................................................................TGGCAAGATGTCGGAATAGCTT...........................................................................................................................................................221282.0028228181000010300000000010000000035030000000400000000000000020202014500000000000000100
..................................................................................................................TTGGCAAGATGTCGGAATAGCT............................................................................................................................................................221253.002536674320101010000200000200000001526020000010000000000011011113234104400000000000001335
...................................................................................................................TGGCAAGATGTCGGAATAGCC............................................................................................................................................................211158.0015810860110400000000000000000000005102503000001000000000000000000000200000000000001000
...................................................................................................................TGGCAAGATGTCGGAATAG..............................................................................................................................................................191139.00139606400201010000000000100200001521000000010000000000010001100024100001000000001220
....................................................................................................................GGCAAGATGTCGGAATAGCT............................................................................................................................................................201123.00123101210000000000000000000000000000000000000000000000000000000000100000000000000000
....................................................................................................................GGCAAGATGTCGGAATAGCTG...........................................................................................................................................................211121.00121001150000000000000000000000000010100000000000000000000000000000400000000000000000
...................................................................................................................TGGCAAGATGTCGGAATAGCTGATT........................................................................................................................................................251110.0011014011100070200000000000000000024010000000101000000010305452313502000001000020000101
..................................................................................................................TTGGCAAGATGTCGGAATAGCTG...........................................................................................................................................................231106.0010610012302050300000000005202001007460900000110000000000000001003401500000000000000001
..................................................................................................................TTGGCAAGATGTCGGAATAGC.............................................................................................................................................................21194.00942821620005000000000000110000001112000000010000000000000001010002200000001000002141
...................................................................................................................TGGCAAGATGTCGGAATAGCTGAA.........................................................................................................................................................24194.00948081001000000000000000210000041328020000050100000000020001004101600101000000001002
....................................................................................................................GGCAAGATGTCGGAATAGCTGA..........................................................................................................................................................22167.006720610000100000000000000000000021000000000000000000000000000000000000000000000000
...................................................................................................................TGGCAAGATGTCGGAATAGCTGATC........................................................................................................................................................25154.005410000000020000000000200000002164702000000000000000000000236400300000000000000000
...................................................................................................................TGGCAAGATGTCGGAATAGCTGG..........................................................................................................................................................23147.004731410000000000000000000000000010200000001000000000010102010000100000001000000000
...................................................................................................................TGGCAAGATGTCGGAATAGCG............................................................................................................................................................21144.004437200000000000000000000000000000000000000000000000000010022000000000000000000000
...................................................................................................................TGGCAAGATGTCGGAATAGCTGTT.........................................................................................................................................................24138.003860900000000000000000000000001000000000010000000000011000000001900000000000000000
...................................................................................................................TGGCAAGATGTCGGAATAGCTGC..........................................................................................................................................................23133.00330001030000000000000040000000020207000016000000000000000010041100000000000000000
............................................................................................................................................................................................................................GGCTATGCCTCATCTAGTCAAT..................................................22130.003000271000000000000000000000000101000000000000000000000000000000000000000000000000
...................................................................................................................TGGCAAGATGTCGGAATAGCTTT..........................................................................................................................................................23129.002930900001000000000000000000000000000000010000000000000000000001400000000000000100
.......................................................................................................................AAGATGTCGGAATAGCTGA..........................................................................................................................................................19122.00220010000603000000000010000000000001000017000000000000000000010100000000000000000
...................................................................................................................TGGCAAGATGTCGGAATAGCA............................................................................................................................................................21118.001800300000000000000000000000000000010000010000000000000000000001200000000000000010
..................................................................................................................TTGGCAAGATGTCGGAATAGCTGA..........................................................................................................................................................24117.00179000000000000000000000000000101001000000000000000000000000010200000000200000000
....................................................................................................................GGCAAGATGTCGGAATAGC.............................................................................................................................................................19115.001500140000100000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................TGGCAAGATGTCGGAATAGCTC...........................................................................................................................................................22113.00131010020000000000000000000000120200000001000000000000000003000000000000000000000
.................................................................................................................TTTGGCAAGATGTCGGAATAGCT............................................................................................................................................................23112.00121311000000000000000000000000000000000000000000000000000100200200000000000000010
..................................................................................................................TTGGCAAGATGTCGGAATAGCC............................................................................................................................................................22110.00108001000000000000000010000000000000000000000000000000000000000000000000000000000
....................................................................................................................GGCAAGATGTCGGAATAGCTGT..........................................................................................................................................................22110.001000100000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................TTGGCAAGATGTCGGAATAGCTT...........................................................................................................................................................2319.0094020000000000000000000000000000000000000000000000000000000000300000000000000000
...................................................................................................................TGGCAAGATGTCGGAATAGCTGAC.........................................................................................................................................................2429.00181025010000000000000000000000010003000000000000000010000001100200000000000000000
.....................................................................................................................GCAAGATGTCGGAATAGCT............................................................................................................................................................1919.0093050000000000000000000000000000000000000000000000000000000000000000000000000010
...................................................................................................................TGGCAAGATGTCGGAATAGCTGACC........................................................................................................................................................2529.00180000010002000000000000000000230104000002000000000000000000000300000000000000000
...................................................................................................................TGGCAAGATGTCGGAATAGCTGATCT-......................................................................................................................................................2628.50170000000011000000000000000000151300000001000000000000000001100200000000000000000
..................................................................................................................TTGGCAAGATGTCGGAATAGCTGT..........................................................................................................................................................2418.0081020000000000000000000000000000000000001000000000000000000000300000000000000001
.....................................................................................................................GCAAGATGTCGGAATAGCTGA..........................................................................................................................................................2118.0080040000000000000000000000000000000000001000000000000000010010100000000000000000
.....................................................................................................................GCAAGATGTCGGAATAGCTG...........................................................................................................................................................2017.0070060000000000000000010000000000000000000000000000000000000000000000000000000000
..................................................................................................................TTGGCAAGATGTCGGAATAG..............................................................................................................................................................2017.0071020000000000000000000000000000100000000000000000000000000000300000000000000000
...................................................................................................................TGGCAAGATGTCGGAATAGCTA...........................................................................................................................................................2217.0071010000001000000000000000000000000000002000000000000000000000200000000000000000
...................................................................................................................TGGCAAGATGTCGGAATAGCTGAAT........................................................................................................................................................2517.0072020000001000000000000000000000000000000000000000000000000000200000000000000000
....................................................................................................................GGCAAGATGTCGGAATAGCTT...........................................................................................................................................................2117.0070070000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................TGGCAAGATGTCGGAATAGCTGTTT........................................................................................................................................................2517.0071020000000000000000000000000010000000000000000000000000100000200000000000000000
...................................................................................................................TGGCAAGATGTCGGAATAGCTGAG.........................................................................................................................................................2415.0050010000000000000000000000000000100000001000000000000000000010100000000000000000
...................................................................................................................TGGCAAGATGTCGGAATAGA.............................................................................................................................................................2015.0051020000000000000000000000000000000000000000000000000000000000200000000000000000
...................................................................................................................TGGCAAGATGTCGGAATAGCTGATTT-......................................................................................................................................................2625.00100021000100000000000000000000100000000000000000000000000000000500000000000000000
......................................................................................................................CAAGATGTCGGAATAGCTGA..........................................................................................................................................................2015.0050000000102000000000010000000100000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................GGCTATGCCTCATCTAGTCA....................................................2015.0050050000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................TGGCAAGATGTCGGAATA...............................................................................................................................................................1814.0040010000000000000000000000000201000000000000000000000000000000000000000000000000
........................................................................................................................AGATGTCGGAATAGCTGA..........................................................................................................................................................1814.0040000010000000000000000000000000100000000000000000000000000000100000000010000000
...................................................................................................................TGGCAAGATGTCGGAATAGCTGATCC-......................................................................................................................................................2614.0040000010000000000000000000000021000000000000000000000000000000000000000000000000
...................................................................................................................TGGCAAGATGTCGGAATAGCTTTT.........................................................................................................................................................2414.0041010000000000000000000000000000000000000000000000000000000000200000000000000000
...................................................................................................................TGGCAAGATGTCGGAA.................................................................................................................................................................1614.0040000000000000000000000000000000000000000000000000000000012100000000000000000000
...................................................................................................................TGGCAAGATGTCGGAATAGT.............................................................................................................................................................2013.0030000000000000000000000000000000000000000000000000000000000001200000000000000000
..................................................................................................................TTGGCAAGATGTCGGAATAGCTC...........................................................................................................................................................2313.0031000000000000000000000000000011000000000000000000000000000000000000000000000000
...................................................................................................................TGGCAAGATGTCGGAATAGCAT...........................................................................................................................................................2213.0030010000000000000000000000000000000000000000000000000000000000200000000000000000
...................................................................................................................TGGCAAGATGTCGGAATAGCTGTTC........................................................................................................................................................2513.0030000000000000000000000000000010100000000000000000000000100000000000000000000000
.....................................................................................................................GCAAGATGTCGGAATAGC.............................................................................................................................................................1813.0030020000000000000000000000000000000000000000000000000000100000000000000000000000
...................................................................................................................TGGCAAGATGTCGGAATAGCTCT..........................................................................................................................................................2313.0032000010000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................CAAGATGTCGGAATAGCT............................................................................................................................................................1813.0031010000000000000000000000000000000000000000000000000000001000000000000000000000
....................................................................................................................GGCAAGATGTCGGAATAG..............................................................................................................................................................1813.0030030000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................GGCAAGATGTCGGAATAGCTGAT.........................................................................................................................................................2313.0030030000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................GGCTATGCCTCATCTAGTCAATT.................................................2312.0020020000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................AGATGTCGGAATAGCT............................................................................................................................................................1612.0020000000000000000000000000000000000000000010000000000000000100000000000000000000
............................................................................................................................................................................................................................GGCTATGCCTCATCTAGTCT....................................................2012.0020020000000000000000000000000000000000000000000000000000000000000000000000000000
droMoj3
CA-TAGT--GCT----C------------GG-----------------------------------------------TAATGTG---GTCCTCG-------CAAATAATGAATTTGGCAAGATGTCGGAATAGCTGAGAG-CACAA--ATATCATAGAAT----CCAGAATTTAT----------ATT-TTGTGTATT-TTATTGA----GTACA--GCGGCTATGCCTCATCTAGTCAATTGCATTCATTTGACAGCAGCAACCAAGGA---------------------SizeHit CountTotal NormTotalM046

Female-body		V041

Embryo		V049

Head		V056

Head		M060

Embryo		V110

Male-body
...................................................................................................................TGGCAAGATGTCGGAATAGCTGA..........................................................................................................................................................2314507.004507584201201919241759
...................................................................................................................TGGCAAGATGTCGGAATAGCT............................................................................................................................................................2112607.00260775213542391738
...................................................................................................................TGGCAAGATGTCGGAATAGCTG...........................................................................................................................................................2211467.001467625211612224569
...................................................................................................................TGGCAAGATGTCGGAATAGC.............................................................................................................................................................201672.00672820510105470
...................................................................................................................TGGCAAGATGTCGGAATAGCTGAT.........................................................................................................................................................241132.00132196002978
...................................................................................................................TGGCAAGATGTCGGAATAGCTT...........................................................................................................................................................22198.009830023063
...................................................................................................................TGGCAAGATGTCGGAATAG..............................................................................................................................................................19179.007938002039
....................................................................................................................GGCAAGATGTCGGAATAGCT............................................................................................................................................................20172.00727100010
...................................................................................................................TGGCAAGATGTCGGAATAGCTGT..........................................................................................................................................................23165.006518222536
...................................................................................................................TGGCAAGATGTCGGAATAGCTGATT........................................................................................................................................................25164.00641010755
....................................................................................................................GGCAAGATGTCGGAATAGCTG...........................................................................................................................................................21156.00565400011
....................................................................................................................GGCAAGATGTCGGAATAGCTGA..........................................................................................................................................................22138.00383600011
...................................................................................................................TGGCAAGATGTCGGAATAGCTGAA.........................................................................................................................................................24125.00256000514
............................................................................................................................................................................................................................GGCTATGCCTCATCTAGTCAAT..................................................22119.00196000130
....................................................................................................................GGCAAGATGTCGGAATAGC.............................................................................................................................................................19111.00111100000
...................................................................................................................TGGCAAGATGTCGGAATAGCTGG..........................................................................................................................................................2319.009240021
...................................................................................................................TGGCAAGATGTCGGAATAGCTGC..........................................................................................................................................................2319.009030015
...................................................................................................................TGGCAAGATGTCGGAATAGCTGATTT-......................................................................................................................................................2628.50170000017
...................................................................................................................TGGCAAGATGTCGGAATAGCA............................................................................................................................................................2117.007200005
...................................................................................................................TGGCAAGATGTCGGAATAGCTGAAT........................................................................................................................................................2516.006000006
...................................................................................................................TGGCAAGATGTCGGAATAGCC............................................................................................................................................................2125.5011100091
............................................................................................................................................................................................................................GGCTATGCCTCATCTAGTCA....................................................2015.005500000
...................................................................................................................TGGCAAGATGTCGGAATAGCTTT..........................................................................................................................................................2315.005200003
...................................................................................................................TGGCAAGATGTCGGAATAGCTC...........................................................................................................................................................2215.005100004
...................................................................................................................TGGCAAGATGTCGGAATAGCTGTT.........................................................................................................................................................2415.005000113
...................................................................................................................TGGCAAGATGTCGGAATAGA.............................................................................................................................................................2015.005100004
...................................................................................................................TGGCAAGATGTCGGAATA...............................................................................................................................................................1824.509900000
.....................................................................................................................GCAAGATGTCGGAATAGCTGA..........................................................................................................................................................2114.004200011
............................................................................................................................................................................................................................GGCTATGCCTCATCTAGTCAA...................................................2114.004200020
.....................................................................................................................GCAAGATGTCGGAATAGCTG...........................................................................................................................................................2014.004300010
...................................................................................................................TGGCAAGATGTCGGAATAGCTGAC.........................................................................................................................................................2423.507000052
....................................................................................................................GGCAAGATGTCGGAATAGCTGAT.........................................................................................................................................................2313.003300000
...................................................................................................................TGGCAAGATGTCGGAATAGCTGATC........................................................................................................................................................2513.003001002
...................................................................................................................TGGCAAGATGTCGGAATAGCTA...........................................................................................................................................................2213.003100002
.....................................................................................................................GCAAGATGTCGGAATAGCT............................................................................................................................................................1913.003300000
....................................................................................................................GGCAAGATGTCGGAATAG..............................................................................................................................................................1813.003300000
...................................................................................................................TGGCAAGATGTCGGAATAGT.............................................................................................................................................................2013.003000012
...................................................................................................................TGGCAAGATGTCGGAATAGCTGACT........................................................................................................................................................2522.505000113
.............................................................................................................................................................................................................................GCTATGCCTCATCTAGTCAAT..................................................2112.002200000
......................................................................................................................CAAGATGTCGGAATAGCTGA..........................................................................................................................................................2012.002100010
....................................................................................................................GGCAAGATGTCGGAATAGCTGAA.........................................................................................................................................................2312.002200000
............................................................................................................................................................................................................................GGCTATGCCTCATCTAGTCAAC..................................................2212.002000020
.................................................................................................................TTTGGCAAGATGTCGGAATAGCT............................................................................................................................................................2312.002002000
.......................................................................................................................AAGATGTCGGAATAGCTGA..........................................................................................................................................................1912.002100001
....................................................................................................................GGCAAGATGTCGGAATAGCTT...........................................................................................................................................................2112.002200000
............................................................................................................................................................................................................................GGCTATGCCTCATCTAGTC.....................................................1911.001100000
.................................................................................................................TTTGGCAAGATGTCGGAATAG..............................................................................................................................................................2111.001100000
...................................................................................................................TGGCAAGATGTCGGAATAGCTGAGT........................................................................................................................................................2511.001000001
...................................................................................................................TGGCAAGATGTCGGAATAGCTGAG.........................................................................................................................................................2411.001000001
.............................................................................................................................................................................................................................GCTATGCCTCATCTAGTCA....................................................1911.001100000
droGri2
CC-------------------------------------------------------------------------------------------CG-CA--AACAAATAATGAATTTGGCAAGATGTCGGAATAGCTGACAG-CACAA--GA-TCACA-AAT----CAAGAAACTTT----------ATT-TTGTGTATTTTTATTGA----GTACA--GCGGCTATGCCTCATCTAGTCAATTGCATTCATTTGACATCAACAACGA-------------------------SizeHit CountTotal NormTotalM041

Female-body		V109

Male-body
...................................................................................................................TGGCAAGATGTCGGAATAGCTGA..........................................................................................................................................................231608.00608144464
...................................................................................................................TGGCAAGATGTCGGAATAGCTG...........................................................................................................................................................221308.00308166142
...................................................................................................................TGGCAAGATGTCGGAATAGCT............................................................................................................................................................211303.00303110193
...................................................................................................................TGGCAAGATGTCGGAATAGC.............................................................................................................................................................20144.00441133
...................................................................................................................TGGCAAGATGTCGGAATAGCTGAT.........................................................................................................................................................24125.0025718
...................................................................................................................TGGCAAGATGTCGGAATAGCTGAA.........................................................................................................................................................24120.0020119
...................................................................................................................TGGCAAGATGTCGGAATAGCTGT..........................................................................................................................................................23117.0017512
....................................................................................................................GGCAAGATGTCGGAATAGCTGA..........................................................................................................................................................22115.0015150
....................................................................................................................GGCAAGATGTCGGAATAGCTG...........................................................................................................................................................21113.0013130
....................................................................................................................GGCAAGATGTCGGAATAGCT............................................................................................................................................................20111.0011110
............................................................................................................................................................................................................................GGCTATGCCTCATCTAGTCAAT..................................................2217.00770
...................................................................................................................TGGCAAGATGTCGGAATAGCTT...........................................................................................................................................................2216.00624
...................................................................................................................TGGCAAGATGTCGGAATAGCTGATT........................................................................................................................................................2515.00514
...................................................................................................................TGGCAAGATGTCGGAATAGCTGG..........................................................................................................................................................2313.00303
...................................................................................................................TGGCAAGATGTCGGAATAGCTGC..........................................................................................................................................................2313.00303
...................................................................................................................TGGCAAGATGTCGGAATAGCTGAC.........................................................................................................................................................2412.00211
...................................................................................................................TGGCAAGATGTCGGAATAGCTGAAT........................................................................................................................................................2512.00202
...................................................................................................................TGGCAAGATGTCGGAATAG..............................................................................................................................................................1912.00202
...................................................................................................................TGGCAAGATGTCGGAATAGCTGCT.........................................................................................................................................................2412.00202
....................................................................................................................GGCAAGATGTCGGAATAGC.............................................................................................................................................................1912.00220
....................................................................................................................GGCAAGATGTCGGAATAGCTGAA.........................................................................................................................................................2311.00110
..................................................................................................................TTGGCAAGATGTCGGAATAGCT............................................................................................................................................................2211.00101
..................................................................................................................TTGGCAAGATGTCGGAATAGC.............................................................................................................................................................2111.00101
.....................................................................................................................GCAAGATGTCGGAATAGCTGA..........................................................................................................................................................2111.00110
...................................................................................................................TGGCAAGATGTCGGAATAGCTGTTT........................................................................................................................................................2511.00110
....................................................................................................................GGCAAGATGTCGGAATAGCTGATT........................................................................................................................................................2411.00110
...................................................................................................................TGGCAAGATGTCGGAATAGCTGATTT-......................................................................................................................................................2621.00202
...................................................................................................................TGGCAAGATGTCGGAATAGCTA...........................................................................................................................................................2211.00101
...................................................................................................................TGGCAAGATGTCGGAATAGCTGAAG........................................................................................................................................................2520.50110
...................................................................................................................TGGCAAGATGTCGGAATAGCTGATG........................................................................................................................................................2520.50101

Generated: 10/20/2015 at 07:34 PM