dan-mir-316

GCCAAGTCTAAGTATAAAACGATAGTGCTTTTCTTCAAGAACATATATTCAAATTCTAGTCGATTTGTCTTTTTCCGCTTACTGGCGTTTAATTCAAACAACGACAGGAAAGGGAAAAAGGCGTATTTACTATGAGTTTGGTCAACATTTCGTCAAAGTCTAAATTAAAAAATGTCATCATCAATATCT ************************************************((((((((((.(((.(((((((((((.(((.(((.((((..........)))).)))..)))))))))))))).))).)))).)))))).***********************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	M044 female body	V105 male body	M058 embryo	V055 head	V106 head	V039 embryo
.................................................................TGTCTTTTTCCGCTTACTGGCG......................................................................................................	22	0	1	19287.00	19287	16815	454	447	751	631	189
.................................................................TGTCTTTTTCCGCTTACTGG........................................................................................................	20	0	1	10371.00	10371	10172	30	83	14	72	0
.................................................................TGTCTTTTTCCGCTTACTGGC.......................................................................................................	21	0	1	5346.00	5346	4980	27	213	31	79	16
.................................................................TGTCTTTTTCCGCTTACTGGCGT.....................................................................................................	23	0	1	3307.00	3307	1797	908	243	208	116	35
..................................................................GTCTTTTTCCGCTTACTGGCG......................................................................................................	21	0	1	1394.00	1394	1390	0	1	2	1	0
..................................................................GTCTTTTTCCGCTTACTGG........................................................................................................	19	0	1	667.00	667	667	0	0	0	0	0
.................................................................TGTCTTTTGCCGCTTACTGGCG......................................................................................................	22	1	1	592.00	592	592	0	0	0	0	0
.................................................................TGTCTTTTTCCGCTTACTGGCT......................................................................................................	22	1	1	495.00	495	447	16	1	17	12	2
.................................................................TGTCTTTTGCCGCTTACTGG........................................................................................................	20	1	1	417.00	417	417	0	0	0	0	0
.......................................................................................................ACAGGAAAGGGAAAAAGGCGTA................................................................	22	0	1	405.00	405	178	67	142	5	8	5
..................................................................GTCTTTTTCCGCTTACTGGC.......................................................................................................	20	0	1	353.00	353	353	0	0	0	0	0
.................................................................TGTCTTTTTCCGCTTACTGGCGTT....................................................................................................	24	0	1	264.00	264	139	77	14	13	21	0
.................................................................TGTCTTTTACCGCTTACTGGCG......................................................................................................	22	1	1	257.00	257	257	0	0	0	0	0
.................................................................TGTCTTTTTCCGCTTACTG.........................................................................................................	19	0	1	228.00	228	224	1	0	0	2	1
.................................................................TGTCTTTTGCCGCTTACTGGC.......................................................................................................	21	1	1	189.00	189	189	0	0	0	0	0
.................................................................TGTCTTTTACCGCTTACTGG........................................................................................................	20	1	1	157.00	157	157	0	0	0	0	0
.......................................................................................................ACAGGAAAGGGAAAAAGG....................................................................	18	0	1	151.00	151	48	88	0	3	10	2
.................................................................TGTCTTTTTCCGCTTACTGGT.......................................................................................................	21	1	1	145.00	145	137	2	0	2	3	1
.................................................................TGTCTTTTCCCGCTTACTGGCG......................................................................................................	22	1	1	124.00	124	123	1	0	0	0	0
.................................................................TTTCTTTTTCCGCTTACTGGCG......................................................................................................	22	1	1	115.00	115	17	2	93	1	1	1
.................................................................TGTCTTTTTCCGCTTACTGGCA......................................................................................................	22	1	1	114.00	114	99	1	2	4	8	0
..................................................................GTCTTTTTCCGCTTACTGGCGT.....................................................................................................	22	0	1	112.00	112	110	0	2	0	0	0
.................................................................TGTCTTTTACCGCTTACTGGC.......................................................................................................	21	1	1	87.00	87	87	0	0	0	0	0
.................................................................TGTCTTTTTCCGCTTACTGGCGA.....................................................................................................	23	1	1	83.00	83	55	1	1	7	19	0
.................................................................TTTCTTTTTCCGCTTACTGGCGT.....................................................................................................	23	1	1	77.00	77	0	2	75	0	0	0
.................................................................TGTCTTTTGCCGCTTACTGGCGT.....................................................................................................	23	1	1	72.00	72	71	0	0	1	0	0
.................................................................TGTCTTTTTCCGCTTACTGGCGTTT...................................................................................................	25	0	1	70.00	70	40	21	0	5	4	0
.................................................................TGTCTTTTCCCGCTTACTGG........................................................................................................	20	1	1	69.00	69	69	0	0	0	0	0
.................................................................TGTCTTTTTCCGCTTACTGGCGC.....................................................................................................	23	1	1	69.00	69	3	0	61	5	0	0
...................................................................TCTTTTTCCGCTTACTGGCG......................................................................................................	20	0	1	67.00	67	66	0	1	0	0	0
....................................................................CTTTTTCCGCTTACTGGCG......................................................................................................	19	0	1	63.00	63	60	0	1	2	0	0
.................................................................TGTCTTTTTCCGCTTACTGGA.......................................................................................................	21	1	1	63.00	63	59	0	0	0	4	0
................................................................CTGTCTTTTTCCGCTTACTGGCG......................................................................................................	23	1	1	63.00	63	57	1	4	1	0	0
..................................................................GTCTTTTTGCGCTTACTGGCG......................................................................................................	21	1	1	62.00	62	62	0	0	0	0	0
.................................................................TTTCTTTTTCCGCTTACTGGC.......................................................................................................	21	1	1	61.00	61	0	0	61	0	0	0
.................................................................TGTCTTTTTCCGCTTACTGTCG......................................................................................................	22	1	1	56.00	56	13	2	0	19	14	8
......................................................................................................GACAGGAAAGGGAAAAAGGCGTA................................................................	23	0	1	54.00	54	11	11	22	0	6	4
.................................................................GGTCTTTTTCCGCTTACTGGCG......................................................................................................	22	1	1	52.00	52	48	1	1	1	1	0
.......................................................................................................ACAGGAAAGGGAAAAAGGCGT.................................................................	21	0	1	51.00	51	23	10	17	1	0	0
.................................................................TGCCTTTTTCCGCTTACTGGCG......................................................................................................	22	1	1	47.00	47	18	0	23	5	0	1
.................................................................TGTCTTTTCCCGCTTACTGGC.......................................................................................................	21	1	1	46.00	46	45	0	0	0	1	0
.................................................................GGTCTTTTTCCGCTTACTGG........................................................................................................	20	1	1	41.00	41	41	0	0	0	0	0
.....................................................................TTTTTCCGCTTACTGGCG......................................................................................................	18	0	1	38.00	38	31	0	7	0	0	0
.................................................................TGTCTTTTTCCGCTTACTGT........................................................................................................	20	1	1	37.00	37	34	1	0	0	2	0
.......................................................................................................ACAGGAAAGGGAAAAAGGC...................................................................	19	0	1	36.00	36	11	19	5	0	1	0
.................................................................TGTCTTTTTCCGCTTACT..........................................................................................................	18	0	1	36.00	36	36	0	0	0	0	0
.................................................................TGTCTTTTTCCGCTTACTGGCGG.....................................................................................................	23	1	1	33.00	33	33	0	0	0	0	0
..................................................................GTCTTTTTCCGCTTACTGGCT......................................................................................................	21	1	1	33.00	33	33	0	0	0	0	0
................................................................CTGTCTTTTTCCGCTTACTGG........................................................................................................	21	1	1	32.00	32	30	0	2	0	0	0
.................................................................TGTCTTTTGCCGCTTACTGGCT......................................................................................................	22	2	1	32.00	32	32	0	0	0	0	0
...................................................................TCTTTTTCCGCTTACTGG........................................................................................................	18	0	1	31.00	31	31	0	0	0	0	0
................................................................GTGTCTTTTTCCGCTTACTGGCG......................................................................................................	23	1	1	31.00	31	31	0	0	0	0	0
.......................................................................................................ACAGGAAAGGGAAAAAGGCG..................................................................	20	0	1	30.00	30	21	7	1	0	1	0
.................................................................TGGCTTTTTCCGCTTACTGGCG......................................................................................................	22	1	1	29.00	29	1	0	0	18	10	0
.................................................................TGCCTTTTTCCGCTTACTGGCGT.....................................................................................................	23	1	1	28.00	28	0	3	23	2	0	0
..................................................................GTCTTTTTACGCTTACTGGCG......................................................................................................	21	1	1	27.00	27	27	0	0	0	0	0
.................................................................TGTTTTTTTCCGCTTACTGGCG......................................................................................................	22	1	1	26.00	26	1	0	24	0	1	0
.................................................................AGTCTTTTTCCGCTTACTGGCG......................................................................................................	22	1	1	25.00	25	18	2	3	2	0	0
.................................................................TGTCTTTTGCCGCTTACTGGCC......................................................................................................	22	2	1	24.00	24	24	0	0	0	0	0
......................................................................................................GACAGGAAAGGGAAAAAGG....................................................................	19	0	1	24.00	24	5	19	0	0	0	0
.................................................................TGTCTTTTTCCGCTTACTGGCGTAT...................................................................................................	25	1	1	24.00	24	19	2	0	1	2	0
....................................................................CTTTTTCCGCTTACTGGC.......................................................................................................	18	0	1	23.00	23	23	0	0	0	0	0
...................................................................TCTTTTTCCGCTTACTGGC.......................................................................................................	19	0	1	23.00	23	22	0	1	0	0	0
.................................................................TTTCTTTTTCCGCTTACTGG........................................................................................................	20	1	1	23.00	23	6	0	17	0	0	0
.................................................................TGTCTTTTTCCGCTTACTTGCG......................................................................................................	22	1	1	22.00	22	3	2	0	2	3	12
.................................................................TGTCTTTTTCCGCTTACTGGCTT.....................................................................................................	23	1	1	22.00	22	20	0	0	2	0	0
.................................................................TGTCCTTTTCCGCTTACTGGCG......................................................................................................	22	1	1	22.00	22	14	1	1	2	2	2
.................................................................TGTCTTTTACCGCTTACTGGCGT.....................................................................................................	23	1	1	22.00	22	21	1	0	0	0	0
................................................................ATGTCTTTTTCCGCTTACTGGCG......................................................................................................	23	1	1	21.00	21	21	0	0	0	0	0
.................................................................TTTCTTTTTCCGCTTACTGGCGC.....................................................................................................	23	2	1	20.00	20	0	0	20	0	0	0
.................................................................TGTCTTTTTCCGCTTACTGGCC......................................................................................................	22	1	1	20.00	20	8	0	12	0	0	0
.................................................................TGTCTTTTTCCGCTTACTGGCGTA....................................................................................................	24	1	1	19.00	19	8	6	0	3	2	0
......................................................................................................GACAGGAAAGGGAAAAAGGCGT.................................................................	22	0	1	19.00	19	10	4	3	0	2	0
.................................................................TGTCTTTTTCCTCTTACTGGCG......................................................................................................	22	1	1	18.00	18	3	3	0	3	3	6
..................................................................GTCTTTTTGCGCTTACTGGC.......................................................................................................	20	1	1	18.00	18	18	0	0	0	0	0
.................................................................TGTCTTTTTCCGCTTACTGGCGTTA...................................................................................................	25	1	1	17.00	17	11	5	0	1	0	0
........................................................................................................CAGGAAAGGGAAAAAGGCGTA................................................................	21	0	1	17.00	17	14	0	3	0	0	0
.................................................................GGTCTTTTTCCGCTTACTGGC.......................................................................................................	21	1	1	17.00	17	17	0	0	0	0	0
.................................................................TGTCTTTTTCCGCTTACTGACG......................................................................................................	22	1	1	17.00	17	6	0	7	0	1	3
.......................................................................................................ACAGGAAAGGGAAAAAGGT...................................................................	19	1	2	16.00	32	17	15	0	0	0	0
.................................................................CGTCTTTTTCCGCTTACTGGCG......................................................................................................	22	1	1	16.00	16	13	0	1	1	0	1
.................................................................TGTTTTTTTCCGCTTACTGGC.......................................................................................................	21	1	1	15.00	15	0	0	15	0	0	0
................................................................CTGTCTTTTTCCGCTTACTGGC.......................................................................................................	22	1	1	14.00	14	12	0	2	0	0	0
.................................................................TGTCTTTTACCGCTTACTGGCT......................................................................................................	22	2	1	14.00	14	14	0	0	0	0	0
.......................................................................................................ACAGGAAAGGGAAAAAGGCGTAT...............................................................	23	0	1	14.00	14	11	1	1	0	0	1
................................................................TTGTCTTTTTCCGCTTACTGGCG......................................................................................................	23	0	1	13.00	13	13	0	0	0	0	0
.................................................................TGTCTTTTTCCGATTACTGGCG......................................................................................................	22	1	1	13.00	13	0	5	0	2	6	0
..................................................................GTCTTTTTCCGCTTACTGGCGTT....................................................................................................	23	0	1	13.00	13	10	2	1	0	0	0
.................................................................TGCCTTTTTCCGCTTACTGGC.......................................................................................................	21	1	1	13.00	13	3	0	10	0	0	0
.................................................................TGTCTTTTCCCGCTTACTGGCGT.....................................................................................................	23	1	1	13.00	13	13	0	0	0	0	0
......................................................................................................GACAGGAAAGGGAAAAAGGCG..................................................................	21	0	1	12.00	12	9	3	0	0	0	0
.................................................................TGTCTTTTTCCGCTTACTGGTT......................................................................................................	22	2	1	12.00	12	11	1	0	0	0	0
.................................................................TGTCTTTTTCCGATTACTGGCGT.....................................................................................................	23	1	1	12.00	12	0	10	0	0	2	0
.................................................................TGTCTTTTTCCGCTTACTGGAG......................................................................................................	22	1	1	12.00	12	2	2	0	1	7	0
................................................................GTGTCTTTTTCCGCTTACTGG........................................................................................................	21	1	1	11.00	11	11	0	0	0	0	0
.................................................................TGTCTTTTTCCGCTTACTGA........................................................................................................	20	1	1	11.00	11	11	0	0	0	0	0
..................................................................GTCTTTTTCCGCTTACTGGCA......................................................................................................	21	1	1	11.00	11	11	0	0	0	0	0
.................................................................TGTCTTTTTCCTCTTACTGG........................................................................................................	20	1	1	11.00	11	9	1	0	0	1	0
.................................................................TGTTTTTTTCCGCTTACTGGCGT.....................................................................................................	23	1	1	11.00	11	0	0	11	0	0	0
................................................................ATGTCTTTTTCCGCTTACTGG........................................................................................................	21	1	1	11.00	11	11	0	0	0	0	0
..................................................................GTCTTTTTCCGCTTACTG.........................................................................................................	18	0	1	11.00	11	11	0	0	0	0	0
.................................................................TGTCTTTTTCCGCTTACTGTCGT.....................................................................................................	23	1	1	11.00	11	0	3	2	3	0	3
................................................................GTGTCTTTTTCCGCTTACTGGC.......................................................................................................	22	1	1	11.00	11	11	0	0	0	0	0
.................................................................TGTCTTTTTCCGCTTACTGGTGT.....................................................................................................	23	1	1	11.00	11	0	10	0	0	1	0
.................................................................TGTCTTTTTCCGCTTACTGAC.......................................................................................................	21	1	1	11.00	11	1	0	10	0	0	0
.................................................................TATCTTTTTCCGCTTACTGGCG......................................................................................................	22	1	1	11.00	11	7	0	3	0	1	0
.................................................................TGTCTTTTTCCGCTTACCGGCG......................................................................................................	22	1	1	10.00	10	8	0	0	1	1	0
..................................................................GTCTTTTTCCGCTTACTGGA.......................................................................................................	20	1	1	10.00	10	10	0	0	0	0	0
.................................................................TGTTTTTTTCCGCTTACTGG........................................................................................................	20	1	1	10.00	10	4	0	6	0	0	0
.................................................................TGTCTTTTTCCGCTTACTGGCGAA....................................................................................................	24	2	1	10.00	10	4	1	0	1	4	0
.................................................................TGTCTTTTTCCGCTTACTGGAGT.....................................................................................................	23	1	1	10.00	10	1	8	0	0	1	0
.................................................................TGTCTTTTTCCGCTTACTGGCAT.....................................................................................................	23	1	1	10.00	10	7	0	3	0	0	0
.................................................................TGGCTTTTTCCGCTTACTGGCGT.....................................................................................................	23	1	1	9.00	9	0	1	0	6	1	1
.................................................................TGTCTTTTTCCGCTTACTCGCG......................................................................................................	22	1	1	9.00	9	2	0	0	7	0	0
..................................................................GTCTTTTTTCGCTTACTGGCG......................................................................................................	21	1	1	9.00	9	9	0	0	0	0	0
.................................................................TGTCTTTTTCCGCTTACTGACGT.....................................................................................................	23	1	1	9.00	9	0	0	7	0	0	2
.................................................................TGTCTCTTTCCGCTTACTGGCG......................................................................................................	22	1	1	9.00	9	8	0	0	1	0	0
................................................................TTGTCTTTTTCCGCTTACTGG........................................................................................................	21	0	1	9.00	9	9	0	0	0	0	0
..................................................................GTCTTTTTCCGCTTACTGGCGG.....................................................................................................	22	1	1	9.00	9	9	0	0	0	0	0
.................................................................TGTCCTTTTCCGCTTACTGG........................................................................................................	20	1	1	8.00	8	7	0	0	0	1	0
.................................................................TGTCTTTTTCCTCTTACTGGCGT.....................................................................................................	23	1	1	8.00	8	0	6	0	2	0	0
...................................................................TGTCTTTCCGCTTACTGGCG......................................................................................................	20	2	1	8.00	8	7	0	0	0	1	0
.......................................................................................................ACAGGAAAGGGAAAAAGGCGTT................................................................	22	1	1	8.00	8	6	1	1	0	0	0
.................................................................TGTCTTTTTCCGCTTACTGC........................................................................................................	20	1	1	8.00	8	6	0	1	0	1	0
.................................................................TGTCTTTTTCCGCTTTCTGGCG......................................................................................................	22	1	1	8.00	8	1	3	0	1	2	1
.................................................................TGTCTTTTTCCGCCTACTGGCG......................................................................................................	22	1	1	8.00	8	6	0	0	1	1	0
.................................................................TGTCTCTTTCCGCTTACTGG........................................................................................................	20	1	1	8.00	8	8	0	0	0	0	0
..................................................................GTCTTTTTGCGCTTACTGGCGT.....................................................................................................	22	1	1	8.00	8	8	0	0	0	0	0
.......................................................................................................ACAGGAAAGGGAAAAAGGCGTAA...............................................................	23	1	1	8.00	8	5	1	1	0	1	0
.................................................................TGTCTTTTTCAGCTTACTGGCG......................................................................................................	22	1	1	8.00	8	1	2	2	2	1	0
.................................................................TGTCTTTTTCCGCTTACTGGTG......................................................................................................	22	1	1	8.00	8	2	3	0	2	1	0
.................................................................TTCCTTTTTCCGCTTACTGGCG......................................................................................................	22	2	1	8.00	8	0	0	8	0	0	0
.................................................................TGTCTTTTGCCGGTTACTGGCG......................................................................................................	22	2	1	8.00	8	8	0	0	0	0	0
.................................................................TCTCTTTTTCCGCTTACTGGCG......................................................................................................	22	1	1	8.00	8	4	0	3	1	0	0
.................................................................TGCCTTTTTCCGCTTACTGG........................................................................................................	20	1	1	8.00	8	4	0	4	0	0	0
.................................................................TGTCTTTTTCCGCTTACTGCCG......................................................................................................	22	1	1	8.00	8	1	1	0	5	0	1
.................................................................TGTCTTTTTCCACTTACTGGCG......................................................................................................	22	1	1	7.00	7	5	2	0	0	0	0
.................................................................TGTCTTTTTCCCCTTACTGGCG......................................................................................................	22	1	1	7.00	7	4	1	0	1	1	0
.................................................................TGTATTTTTCCGCTTACTGGCGT.....................................................................................................	23	1	1	7.00	7	0	5	0	2	0	0
.................................................................TGTCCTTTTCCGCTTACTGGCGT.....................................................................................................	23	1	1	7.00	7	3	0	3	0	1	0
.................................................................GGTCTTTTTCCGCTTACTGGCGT.....................................................................................................	23	1	1	7.00	7	5	0	1	1	0	0
.......................................................................................................ACAGGAAAAGGAAAAAGGCGTA................................................................	22	1	1	7.00	7	7	0	0	0	0	0
.................................................................TGTCTTTTTCCGCTTACTAGCG......................................................................................................	22	1	1	7.00	7	3	1	0	1	1	1
................................................................CTGTCTTTTTCCGCTTACTGGCGT.....................................................................................................	24	1	1	7.00	7	5	1	1	0	0	0
.................................................................CGTCTTTTTCCGCTTACTGGC.......................................................................................................	21	1	1	7.00	7	7	0	0	0	0	0
.................................................................TGTCTTTCTCCGCTTACTGGCG......................................................................................................	22	1	1	7.00	7	6	0	0	1	0	0
.................................................................TGACTTTTTCCGCTTACTGGCG......................................................................................................	22	1	1	7.00	7	1	0	0	6	0	0
.................................................................TGTCTTTTTCCGCTTACTGCG.......................................................................................................	21	2	1	7.00	7	6	0	0	0	1	0
.................................................................TGTCTTTTTCCGGTTACTGGCG......................................................................................................	22	1	1	6.00	6	4	0	0	1	1	0
.................................................................TGTCTTTTTCTGCTTACTGGCG......................................................................................................	22	1	1	6.00	6	2	1	0	3	0	0
.................................................................TGTCTTTTTCAGCTTACTGGCGT.....................................................................................................	23	1	1	6.00	6	0	5	1	0	0	0
.................................................................TGTCTTTTTCCGCTTACTTGCGT.....................................................................................................	23	1	1	6.00	6	0	0	0	2	0	4
.................................................................TGTCTTTTTACGCTTACTGGCG......................................................................................................	22	1	1	6.00	6	2	0	1	1	2	0
.................................................................TGTCTTTTTCCGCCTACTGG........................................................................................................	20	1	1	6.00	6	6	0	0	0	0	0
.................................................................TGTCTTTTTCCGCTTATTGGCG......................................................................................................	22	1	1	6.00	6	3	0	0	1	2	0
.................................................................TGTCTTTTTCCGCTTACCGG........................................................................................................	20	1	1	6.00	6	6	0	0	0	0	0
......................................................................................................GACAGGAAAGGGAAAAAGGC...................................................................	20	0	1	6.00	6	0	5	1	0	0	0
.................................................................TGTCTTTTCCCGCTTACTGGCT......................................................................................................	22	2	1	6.00	6	6	0	0	0	0	0
.................................................................TGTCTTTTTCCGCTCACTGGCG......................................................................................................	22	1	1	6.00	6	4	0	0	2	0	0
.................................................................TGTCTTTTTCCGCTTACTGGG.......................................................................................................	21	1	1	6.00	6	3	0	3	0	0	0
.......................................................................................................AGAGGAAAGGGAAAAAGGCGTA................................................................	22	1	1	6.00	6	0	0	6	0	0	0
.................................................................TTCCTTTTTCCGCTTACTGGCGT.....................................................................................................	23	2	1	6.00	6	0	0	6	0	0	0
.................................................................TGTCTTTTTCCGTTTACTGGCG......................................................................................................	22	1	1	6.00	6	5	0	1	0	0	0
....................................................................CTTTTTCCGCTTACTGGCGT.....................................................................................................	20	0	1	6.00	6	3	0	3	0	0	0
.................................................................CGTCTTTTTCCGCTTACTGG........................................................................................................	20	1	1	5.00	5	5	0	0	0	0	0
.................................................................TGCCTTTTTCCGCTTACTGGCGC.....................................................................................................	23	2	1	5.00	5	0	0	5	0	0	0
.................................................................TATCTTTTTCCGCTTACTGG........................................................................................................	20	1	1	5.00	5	4	0	0	1	0	0
..................................................................GTCTTTTTCCGCTTACTGGCGA.....................................................................................................	22	1	1	5.00	5	5	0	0	0	0	0
..................................................................ATCTTTTTCCGCTTACTGGCG......................................................................................................	21	1	1	5.00	5	3	0	0	0	2	0
.................................................................TGTTTTTTTCCGCTTACTGGCGC.....................................................................................................	23	2	1	5.00	5	0	0	5	0	0	0
.................................................................AGTCTTTTTCCGCTTACTGGC.......................................................................................................	21	1	1	5.00	5	5	0	0	0	0	0
.................................................................TATCTTTTTCCGCTTACTGGCGT.....................................................................................................	23	1	1	5.00	5	1	4	0	0	0	0
.................................................................TTTTTTTTTCCGCTTACTGGCG......................................................................................................	22	2	2	5.00	10	0	0	10	0	0	0
.................................................................TGTCCTTTTCCGCTTACTGGC.......................................................................................................	21	1	1	5.00	5	5	0	0	0	0	0
.................................................................TGTCTTTTTCCGCTTACTGGCGTAG...................................................................................................	25	2	1	5.00	5	5	0	0	0	0	0
.................................................................TGTCTTTTTCCGCTTACTGGGGT.....................................................................................................	23	1	1	5.00	5	0	5	0	0	0	0
.................................................................TGTCTTTTACCGCTTACTGGCC......................................................................................................	22	2	1	5.00	5	5	0	0	0	0	0
.................................................................TGTCTTTTTCCGCTTACTGTC.......................................................................................................	21	1	1	5.00	5	2	1	0	0	1	1
.................................................................TTCCTTTTTCCGCTTACTGGC.......................................................................................................	21	2	1	5.00	5	0	0	5	0	0	0
.......................................................................................................ACAGGAAAGGGAAAAAGGA...................................................................	19	1	1	5.00	5	1	3	0	1	0	0
.................................................................TGTCTTTTTCCGCTTACTTGC.......................................................................................................	21	1	1	5.00	5	4	0	0	0	0	1
.................................................................TGTCTTTTTCCGCTTACGGGCG......................................................................................................	22	1	1	5.00	5	2	0	1	1	0	1
.................................................................GGTCTTTTTCCGCTTACTGGCT......................................................................................................	22	2	1	5.00	5	5	0	0	0	0	0
.................................................................TGTCTTTTTCCGCTTACTCG........................................................................................................	20	1	1	5.00	5	4	0	0	1	0	0
.................................................................TGTCTTCTTCCGCTTACTGGCG......................................................................................................	22	1	1	5.00	5	2	1	1	0	1	0
.................................................................TGTCTTTTTCCGCTTACTGGAA......................................................................................................	22	2	1	5.00	5	4	0	0	0	1	0
.................................................................TGTCTTTTGCCGCTTACTGGCGTT....................................................................................................	24	1	1	5.00	5	5	0	0	0	0	0
.....................................................................TTTTTCCGCTTACTGGCGC.....................................................................................................	19	1	1	4.00	4	0	0	4	0	0	0
.................................................................TGTCTTTTTCTGCTTACTGG........................................................................................................	20	1	1	4.00	4	4	0	0	0	0	0
.................................................................TGTATTTTTCCGCTTACTGGCG......................................................................................................	22	1	1	4.00	4	1	0	0	2	1	0
.....................................................................TTTTTCCGCTTACTGGCGT.....................................................................................................	19	0	1	4.00	4	3	0	0	1	0	0
.................................................................TGTCTTTTTTCGCTTACTGGC.......................................................................................................	21	1	1	4.00	4	2	0	1	0	1	0
..................................................................GTCTTTTTCCGCTTACTGGT.......................................................................................................	20	1	1	4.00	4	4	0	0	0	0	0
.................................................................TGTCTTTTTCCGCTTTCTGGCGT.....................................................................................................	23	1	1	4.00	4	0	2	1	1	0	0
.................................................................TGTCTTTTTCCGCCTACTGGC.......................................................................................................	21	1	1	4.00	4	3	0	1	0	0	0
..................................................................GTCTTTTTACGCTTACTGGC.......................................................................................................	20	1	1	4.00	4	4	0	0	0	0	0
.................................................................TCTCTTTTTCCGCTTACTGG........................................................................................................	20	1	1	4.00	4	4	0	0	0	0	0
.....................................................................................................CGACAGGAAAGGGAAAAAGGCGTA................................................................	24	0	1	4.00	4	1	0	3	0	0	0
......................................................................TTTTCCGCTTACTGGCGT.....................................................................................................	18	0	1	4.00	4	2	0	2	0	0	0
.................................................................TGTCTTTTGCCGCTTACTGGCA......................................................................................................	22	2	1	4.00	4	4	0	0	0	0	0
.................................................................TGCCTTTTTCCGCTTACTGGCGTT....................................................................................................	24	1	1	4.00	4	0	0	3	1	0	0
.................................................................TGTCTTTTTTCGCTTACTGGCG......................................................................................................	22	1	1	4.00	4	1	0	1	0	1	1
.................................................................TGTCTTTTTCTGCTTACTGGCGT.....................................................................................................	23	1	1	4.00	4	0	3	1	0	0	0
.................................................................TGTCTTTTTCCACTTACTGG........................................................................................................	20	1	1	4.00	4	4	0	0	0	0	0
.................................................................TGTCTTTTTCCACTTACTGGCGT.....................................................................................................	23	1	1	4.00	4	0	4	0	0	0	0
.................................................................TGTCTTTTTCCGCTTACTGGCGTTTA..................................................................................................	26	0	1	4.00	4	4	0	0	0	0	0
.................................................................TGTCTTTTTCCGCTTACTGGCGTAA...................................................................................................	25	2	1	4.00	4	1	1	0	1	1	0
.................................................................TGTCTTTTTCCGCTTACTGGCGTC....................................................................................................	24	1	1	4.00	4	2	0	2	0	0	0
.................................................................TGTCTTTGTCCGCTTACTGGCG......................................................................................................	22	1	1	4.00	4	1	0	0	1	0	2
.................................................................TGTCTTTTTCCGCTTACTGGCTTT....................................................................................................	24	1	1	3.00	3	3	0	0	0	0	0
.................................................................TGTCTTTTTCCGCATACTGGCG......................................................................................................	22	1	1	3.00	3	1	0	0	2	0	0
.................................................................TTTCTTTTTCCGCTTACTGGCGTT....................................................................................................	24	1	1	3.00	3	0	0	3	0	0	0
.................................................................TGTTTTTTTCCGCTTACTGACGT.....................................................................................................	23	2	1	3.00	3	0	0	3	0	0	0
.................................................................TGTCTTTTTCTGCTTACTGGC.......................................................................................................	21	1	1	3.00	3	2	0	1	0	0	0
.................................................................TGTCTTTTTCCGATTACTGG........................................................................................................	20	1	1	3.00	3	0	2	0	0	1	0
..................................................................TTCTTTTTCCGCTTACTGGCG......................................................................................................	21	1	1	3.00	3	3	0	0	0	0	0
.................................................................TGTCTTTTTCCGCTTACTGGAC......................................................................................................	22	2	1	3.00	3	0	0	2	0	1	0
.................................................................TGTCTCTTTCCGCTTACTGGC.......................................................................................................	21	1	1	3.00	3	3	0	0	0	0	0
.................................................................TGACTTTTTCCGCTTACTGTCG......................................................................................................	22	2	1	3.00	3	0	0	0	3	0	0
.................................................................TGTCTTTTTCCGCTTGCTGGCG......................................................................................................	22	1	1	3.00	3	3	0	0	0	0	0
.................................................................TGCTTTTTTCCGCTTACTGGCG......................................................................................................	22	2	1	3.00	3	0	0	3	0	0	0
..................................................................TTCTTTTTCCGCTTACTGG........................................................................................................	19	1	1	3.00	3	3	0	0	0	0	0
.................................................................TGTCTTTTTCCGCTTACTGGCGAT....................................................................................................	24	1	1	3.00	3	1	2	0	0	0	0
.................................................................TGTCTTTTACCGCTTACTGGCGTT....................................................................................................	24	1	1	3.00	3	3	0	0	0	0	0
.................................................................TGTCTTTTTCCGCTTAATGGCG......................................................................................................	22	1	1	3.00	3	0	0	1	1	1	0
.................................................................TGTCTTTTTACGCTTACTGGCGT.....................................................................................................	23	1	1	3.00	3	0	2	0	1	0	0
.................................................................TGTCTTTTTCCGCTTACTTCCG......................................................................................................	22	2	1	3.00	3	0	0	0	2	0	1
.................................................................TGTCTTTTTCCGATTACTGGCGTT....................................................................................................	24	1	1	3.00	3	0	3	0	0	0	0
.................................................................TCTCTTTTTCCGCTTACTGGCGT.....................................................................................................	23	1	1	3.00	3	0	1	0	2	0	0
.................................................................TGACTTTTTCCGCTTACTGG........................................................................................................	20	1	1	3.00	3	3	0	0	0	0	0
.................................................................TGTCTTTTTCCGCTTACTGGTA......................................................................................................	22	2	1	3.00	3	3	0	0	0	0	0
.................................................................TGTCTTTTTCCGCTTACTGGCGTTAT..................................................................................................	26	2	1	3.00	3	3	0	0	0	0	0
.................................................................TGTCTTTTGCCGCTTACTGGCCT.....................................................................................................	23	2	1	3.00	3	3	0	0	0	0	0
..................................................................GTCTTTTTACGCTTACTGGCGT.....................................................................................................	22	1	1	3.00	3	3	0	0	0	0	0
.................................................................TGTCTTTTTCCTCTTACTGGCT......................................................................................................	22	2	1	3.00	3	0	1	0	1	0	1
.................................................................TGTCTTTTCCCGCTTACTGGCA......................................................................................................	22	2	1	3.00	3	3	0	0	0	0	0
................................................................ATGTCTTTTTCCGCTTACTGGCGT.....................................................................................................	24	1	1	3.00	3	3	0	0	0	0	0
.................................................................TGTCTTTTTCCGCTTACTGGCAG.....................................................................................................	23	2	1	3.00	3	3	0	0	0	0	0
.................................................................TATCTTTTTCCGCTTACTGGC.......................................................................................................	21	1	1	3.00	3	2	0	1	0	0	0
.................................................................AGTCTTTTTCCGCTTACTGG........................................................................................................	20	1	1	3.00	3	3	0	0	0	0	0
.................................................................TGTCTTTTGCCGGTTACTGGC.......................................................................................................	21	2	1	3.00	3	3	0	0	0	0	0
...................................................................TCTTTTTCCGCTTACTGGCGT.....................................................................................................	21	0	1	3.00	3	3	0	0	0	0	0
.................................................................TGTCTTTTTCCGCTTACTGACGC.....................................................................................................	23	2	1	3.00	3	0	0	3	0	0	0
.................................................................TGTCTCTTTCCGCTTACTGGCGT.....................................................................................................	23	1	1	3.00	3	1	0	0	2	0	0
.................................................................TGTCTTTTTCCGCGTACTGGCG......................................................................................................	22	1	1	3.00	3	2	0	0	1	0	0
.................................................................TGTCTTTTTCCGCTTACTGGCGTCT...................................................................................................	25	1	1	3.00	3	3	0	0	0	0	0
.................................................................TGTCTTTTTCCGCTTACTGGCGTTG...................................................................................................	25	1	1	3.00	3	3	0	0	0	0	0
.................................................................TGTCTTTTTCCGCTTACTGGCCT.....................................................................................................	23	1	1	3.00	3	1	1	0	1	0	0
.................................................................TGTCTTTTTCCGCTTACTGGCTG.....................................................................................................	23	2	1	3.00	3	3	0	0	0	0	0
.................................................................TGTGTTTTTCCGCTTACTGG........................................................................................................	20	1	1	3.00	3	3	0	0	0	0	0
.................................................................TGTCTTTTTCCGCTTACTGGCGTTTT..................................................................................................	26	1	1	3.00	3	3	0	0	0	0	0
.................................................................TGTCTTTTTCCGCTTCCTGGCG......................................................................................................	22	1	1	3.00	3	0	0	0	1	1	1
.................................................................TGTCTTTTTCCCCTTACTGGCGT.....................................................................................................	23	1	1	3.00	3	0	3	0	0	0	0
.................................................................TGTCTTTTTCGGCTTACTGGCG......................................................................................................	22	1	1	3.00	3	0	2	0	1	0	0
.................................................................TGTCTTTTTCCGCTTACGGG........................................................................................................	20	1	1	3.00	3	3	0	0	0	0	0
.................................................................TGTCTTTTCCCGCTTACTGGCC......................................................................................................	22	2	1	3.00	3	3	0	0	0	0	0
...................................................................TCTTTTTCGGCTTACTGGCG......................................................................................................	20	1	1	3.00	3	3	0	0	0	0	0
.................................................................TGTCTTTTACCGCTTACTGGCA......................................................................................................	22	2	1	3.00	3	3	0	0	0	0	0
.................................................................TGTCGTTTTCCGCTTACTGGCG......................................................................................................	22	1	1	3.00	3	2	0	0	1	0	0
.................................................................TGTCTTTTACCGCTTACTGGCGA.....................................................................................................	23	2	1	3.00	3	3	0	0	0	0	0
.................................................................TGTCTTTTTCCGCTTACTGCC.......................................................................................................	21	1	1	3.00	3	2	0	0	1	0	0
.................................................................TGTCTTTTTCCGCTTACTAGCGT.....................................................................................................	23	1	1	3.00	3	1	1	0	1	0	0
.................................................................TGTCTTTTTCCGTTTACTGGC.......................................................................................................	21	1	1	3.00	3	1	0	0	0	2	0
.......................................................................................................ACAGGAAAGGGAAAAAGGCTA.................................................................	21	2	1	3.00	3	0	0	0	0	3	0
.................................................................TGTCTTTTTCCGCTTGCTGGCGT.....................................................................................................	23	1	1	3.00	3	0	2	1	0	0	0
................................................................TTGTCTTTTTCCGCTTACTGGC.......................................................................................................	22	0	1	3.00	3	2	0	1	0	0	0
.................................................................TGTCTTTTGCCGCTTACTGGCGTTT...................................................................................................	25	1	1	3.00	3	3	0	0	0	0	0
.................................................................TGGCTTTTTCCGCTTACTGG........................................................................................................	20	1	1	3.00	3	1	0	0	1	1	0
.................................................................TGTCTTTTGCCGGTTACTGG........................................................................................................	20	2	2	2.50	5	5	0	0	0	0	0
.................................................................TGTCTTTTTCAGCTTACTGGC.......................................................................................................	21	1	1	2.00	2	0	0	1	0	1	0
.................................................................TGTCTTTTACCGCTTACTGGA.......................................................................................................	21	2	1	2.00	2	2	0	0	0	0	0
.................................................................TGTCTTTCTCCGCTTACTGGC.......................................................................................................	21	1	1	2.00	2	2	0	0	0	0	0
.................................................................TCTCTTTTTCCGCTTACTGGC.......................................................................................................	21	1	1	2.00	2	1	0	1	0	0	0
.................................................................TGGCTTTTTCCGATTACTGGCG......................................................................................................	22	2	1	2.00	2	0	0	0	1	1	0
.................................................................TGTCTTTTTCCGCTTACTCGCGT.....................................................................................................	23	1	1	2.00	2	0	0	0	2	0	0
................................................................ATGTCTTTGTCCGCTTACTGGCG......................................................................................................	23	2	1	2.00	2	2	0	0	0	0	0
...............................................................TCAGTCTTGTTCCGCTTACTGGCG......................................................................................................	24	3	1	2.00	2	2	0	0	0	0	0
..................................................................GTCTTTTTCCGCTTACTGGCGC.....................................................................................................	22	1	1	2.00	2	2	0	0	0	0	0
...................................................................TGTCTTTCCGCTTACTGG........................................................................................................	18	2	2	2.00	4	4	0	0	0	0	0
.................................................................TGTCTTTTTCCGCTTACTGTCGTT....................................................................................................	24	1	1	2.00	2	0	0	0	0	0	2
.................................................................TGTCTTTTTCCGCTTCCTGGCGT.....................................................................................................	23	1	1	2.00	2	0	1	0	0	0	1
................................................................ATGTCTTTTTCCGCTTACTGGC.......................................................................................................	22	1	1	2.00	2	2	0	0	0	0	0
.................................................................AATCTTTTTCCGCTTACTGGCG......................................................................................................	22	2	1	2.00	2	0	2	0	0	0	0
.................................................................TGTCTTTTTCCGATTACTGGC.......................................................................................................	21	1	1	2.00	2	0	0	0	0	2	0
..................................................................GCCTTTTTCCGCTTACTGG........................................................................................................	19	1	1	2.00	2	2	0	0	0	0	0
.................................................................AGTCTTTTTCCGCTTACTGGCGT.....................................................................................................	23	1	1	2.00	2	2	0	0	0	0	0
...................................................................TGTCTTTCCGCTTACTGGC.......................................................................................................	19	2	1	2.00	2	2	0	0	0	0	0
............................................................CTAATTGTCTTTTTCCGCTTACTGGCG......................................................................................................	27	2	1	2.00	2	2	0	0	0	0	0
.................................................................TGTCTTTTTCCGCTTACTGGCTAT....................................................................................................	24	2	1	2.00	2	2	0	0	0	0	0
.................................................................TGTCTTCTTCCGCTTACTGGCGT.....................................................................................................	23	1	1	2.00	2	0	0	1	1	0	0
..........................................................................................................GGAAAGGGAAAAAGGCGTA................................................................	19	0	1	2.00	2	1	0	1	0	0	0
.................................................................TTCCTTTTTCCGCTTACTGGCGC.....................................................................................................	23	3	1	2.00	2	0	0	2	0	0	0
..................................................................GTCCTTTTCCGCTTACTGG........................................................................................................	19	1	1	2.00	2	2	0	0	0	0	0
................................................................CTGTCTTTGTCCGCTTACTGGCG......................................................................................................	23	2	1	2.00	2	2	0	0	0	0	0
............................................................CTAACTGTCTTTTTCCGCTTACTGGC.......................................................................................................	26	3	1	2.00	2	2	0	0	0	0	0
.................................................................TGTCTTTTTCCGCTTGCTGGC.......................................................................................................	21	1	1	2.00	2	2	0	0	0	0	0
.......................................................................................................ACAGGAAAGGGAAAAAGGCGC.................................................................	21	1	1	2.00	2	0	0	2	0	0	0
.................................................................TGTCTTTTCCCGCTTACTGGCTT.....................................................................................................	23	2	1	2.00	2	2	0	0	0	0	0
.................................................................TGTCATTTTCCGCTTACTGGCG......................................................................................................	22	1	1	2.00	2	2	0	0	0	0	0
.................................................................TGTCTTTTTCCGCTTACTTG........................................................................................................	20	1	1	2.00	2	2	0	0	0	0	0
.................................................................TGTCTTTTTCCACTTACTGGC.......................................................................................................	21	1	1	2.00	2	1	1	0	0	0	0

CGGTTCAGATTCATATTTTGCTATCACGAAAAGAAGTTCTTGTATATAAGTTTAAGATCAGCTAAACAGAAAAAGGCGAATGACCGCAAATTAAGTTTGTTGCTGTCCTTTCCCTTTTTCCGCATAAATGATACTCAAACCAGTTGTAAAGCAGTTTCAGATTTAATTTTTTACAGTAGTAGTTATAGA ***********************************************((((((((((.(((.(((((((((((.(((.(((.((((..........)))).)))..)))))))))))))).))).)))).)))))).************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	V055 head	V039 embryo	M058 embryo
.......................................................................................................TATCCTGTCCCTTTTTCCGCAT................................................................	22	2	1	1.00	1	1	0	0
............................................................................................AGGTTTGTGGCTGTCCTT...............................................................................	18	2	5	0.20	1	0	1	0
.......................................................................................................TGTCCTTTCTCTTTTTCTGAAT................................................................	22	3	8	0.13	1	1	0	0
.......................................................GGACAGCAAAACAGAAAAAGG.................................................................................................................	21	3	9	0.11	1	0	0	1
............................................................GTTAAACAGAGAATGGCGA..............................................................................................................	19	3	20	0.05	1	0	1	0
............................................................GCTAAACAGATAGAGGGGA..............................................................................................................	19	3	20	0.05	1	1	0	0

Species	Coordinate	ID	Type	Alignment
droAna3	scaffold_13337:3985705-3985893 -	dan-mir-316	Known_mirbase	-GCCAAGT--CT---------------AAGTATAAAACGATAGTGCTTT---------------------TCTTCA-----------AGAACATATATTC-AAATTCTAGTCGATTTGTCTTTTTCCGCTTACTGGCGTTTAATTCAAACAACGACAGGAAAGGGAAAAAGGCGTATTTACTATGAGTTTGGTCAACATTTCGT---------------------------CAAAGT----CTAA--AT------------------------------------------------------------TAAAAAATG--------------------------TCATCATCAA-TATCT
droBip1	scf7180000395450:119434-119611 -			-GCCAAGT--CTA-----------------------------GTGCTTTT-------------TTTTC-------AAA---------GATATACATATTC-AAATTCTAGTCGATTTGTCTTTTTCCGCTTACTGGCGTTTAATTCAAACAACGACAGGAAAGGGAAAAAGGCGTATTTACTATGAGTTTGGTCAACATTTCGAC--------------------A-------ACGT----CTAA--TT------------------------------------------------------------TAGAACATG--------------------------TCATCATGAA-AGTCT
droKik1	scf7180000302272:829395-829576 +			-GCT--ATATCTCGCGCATCGGGTATAG-----------------------------AGTATATAGTA--------TA-TATACAGTGTAACGTCTATAT-AAATTCTAGTCGATTTGTCTTTTTCCGCTTACTGGCGTTTTATTCGAGCAACGACAGGAAAGGGAAAAAGGCGTATTTACTATGAGTTTGGCCATCAAG-----------------------------------CT----ATCTGTATTCTG----------------------------------------------------------------------------------------------TGATA---TATGA
droFic1	scf7180000453831:502005-502172 -			-TCT--GTATGTGTCGGATAGACT---------------------------------------------------A-----------AAAGTTAATGCAT-AAATTCTAGTCGATTTGTCTTTTTCCGCTTACTGAAGTTTTATTTGAACAACGTCAGGAAAGGGAAAAAGGCGTATTTACTAAGAGTTTGGCCATCAGTTTCAC---------------CTTCAACGGAG----CA----ATGTG--------------------------------------------------TCCACT-----------------------------------------------------CCTCT
droEle1	scf7180000491199:1233805-1233988 +			-TCG--CTATGTGTCCGACGGACT---------------------------------------------------A-----------AAAGTGTATACAT-AAATTCTAGTCGATTTGTCTTTTTCCGCTTACTGGCGTTTCATTTCAAAAACGACAGGAAAGGGAAAAAGGCGTATTTACTAAGAGTTTGACCAGCAATTTGCA--------------------CCCAATCAAGCT----ATTGACATC--------------------------------------CATGTAAGTATGTTTC-----------------------------------------CATT-------GTCT
droRho1	scf7180000780271:105016-105205 +			-TCG--GTATGTGTCGAATAAACT---------------------------------------------------A-----------AAAGTGTATATAT-AAATTCTAGTCGATTTGTCTTTTTCCGCTTACTGGCGTTTTATTTAAACAACGACAGGAAAGGGAAAAAGGCGTATTTACTATGAGTTTGGCCAACAATT-GCA--------------------AGTAATAAAGCT----ATCTGCATT--------------------------------------CCTGTAAGTATGTTCC-----------------------------------------CATTATCTTGCGCAT
droBia1	scf7180000302377:1644745-1644892 +			-TCG--GGATTCGTCGAGCAGGCC---------------------------------------------------A-----------GAAGTGTATACGT-AAATTCTAGTCGATTTGTCTTTTTCCGCTTACTGGCGTTTCATTTACACAACGACAGGAAAGGGAAAAAGGCGTATTTACTACGAGTTTGACCAACGATTTGCA--------------------GGTGAC------------------------------------------------------------------------------------------------------------------------------TCT
droTak1	scf7180000411025:47414-47574 +			ATCG--GTATTTGC--------CT---------------------------------------------------A-----------AAAGTGTACACAT-AAATTCTAGTCGATTTGTCTTTTTCCGCTTACTGGCGTTTTATATTAACAACGACAGGAAAGGGAAAAAGGCGTATTTACTATGAGTTTGGCCAACAATTTCCA--------------------GGTGATCAGGCT----ATATAA--------------------------------------------------------------------------------------------G-------CCCCG---TGTGT
droEug1	scf7180000409472:489543-489716 -			-TCG--GTATGTGTCGATCAGGCT-----------------------AT---------A-------T----------------CAGTGTACTATATATCT-AAATTCTAGTCGATTTGTCTTTTTCCGCTTACTGGCGTTTCATTTAAACAACGACAGGAAAGGGAAAAAGGCGTATTTACTAAGAGTTTTGCCAACGATTCGCA--------------------GTTGGTCATTCTAAACA----------------------------------------------------------------------------------------------------------CCTAAA-TATCT
dm3	chr3L:21661764-21661926 -	dme-mir-316	Known_mirbase	-TCG--GTATGTG--------------------------------------------------------------A-----------AAAGTGGATACAC-AAATTCTAGTCGATTTGTCTTTTTCCGCTTACTGGCGTTTCAATTCCACAACGACAGGAAAGGGAAAAAGGCGTATTTACTATGAGTTTGCTCAGCGATTTGCA--------------------GGTGATCCAGGT----GTAT--AT------------AG-------------------------------------------------------TA------------TTAGTAAG---------------TATTT
droSim2	3l:21179415-21179588 -	dsi-mir-316	Known_mirbase	-TCG--GTATGTG--------------------------------------------------------------A-----------AAAGTGGATACAC-AAATTCTAGTCGATTTGTCTTTTTCCGCTTACTGGCGTTTCATTTCCACAACGACAGGAAAGGGAAAAAGGCGTATTTACTATGAGTTTGCCCAGCGACTTGCA--------------------GGTGATCCAGGT----GTGT--AT------------AG-------------------------------------------------------TA------------TTAGTAAGTATTCCATCGT----TTGCT
droSec2	scaffold_11:1581825-1581994 -	dse-mir-316	Known_mirbase	-TCG--GTATGTG--------------------------------------------------------------A-----------AAAGTGGATACAC-AAATTCTAGTCGATTTGTCTTTTTCCGCTTACTGGCGTTTCATTTCCACAACGACAGGAAAGGGAAAAAGGCGTATTTACTATGAGTTTGCCCAGCGACTTGCA--------------------GGTGATCCAGGT----GTGT--AT------------AG-------------------------------------------------------TA------------TTAGAAAGTATTTCATCGT--------C
droYak3	3L:18849486-18849653 +	dya-mir-316-1	Known_mirbase	-TCG--GTATGTG--------------------------------------------------------------A-----------AAAGTGGATACAC-AAATTCTAGTCGATTTGTCTTTTTCCGCTTACTGGCGTTTCATTTCAACAACGACAGGAAAGGGAAAAAGGCGTATTTACTATGAGTTTGACCAGCGATTTGCA--------------------GGTGATCAAGGT----GCAT----------------AG----------------------------------------------TATGGGTAGTA------------G--------------TGGTA---TACCC
droEre2	scaffold_4784:21318750-21318942 -	der-mir-316	Known_mirbase	-TCG--GTATGTG--------------------------------------------------------------AAA-TACAC---AAAGTGGATACAC-AAATTCTAGTCGATTTGTCTTTTTCCGCTTACTGGCGTTTCATTTCAACAACGACAGGAAAGGGAAAAAGGCGTATTCACTATGAGTTTGGCCAGCGACTTGCA--------------------GGTGATCAAGGT----GTAT--GT------------AG-------------------------------------------------------TATACCCTCTTGTTTGGGTATGTATTT---CATCTG-TATCA
dp5	XR_group6:4548527-4548728 +	dps-mir-316	Known_mirbase	-AAA--GTCCG-------------------------------AGGTTTTCGCAGCTAAATATATTGTA-------AAA-TATAC---AA-----AGATCA-AAATTCTAGTCGATTTGTCTTTTTCCGCTTACTGGCGTTTTATTCGATCAACGACAGGAAAGGGAAAAAGGCGTATTTACTATGAGTTTATCCAACAAA---CAACCGACCCAATTCAGC--------------------------TT------------AA----------------------TAATAGGTGAGTACATCCC-----------------------------------------CATCATA---TATAT
droPer2	scaffold_9:2845565-2845768 +	dpe-mir-316	Known_mirbase	-AAA--GTCCG-------------------------------AGGTTTTCGCAGCTAAATATATTGTA-------AAA-TATAC---AA-----AGATCA-AAATTCTAGTCGATTTGTCTTTTTCCGCTTACTGGCGTTTTATTCGATCAACGACAGGAAAGGGAAAAAGGCGTATTTACTATGAGTTTATCCAACAAA---CAACCGACCCAATTCAGC--------------------------TT------------AA----------------------TAATAGGTGAGTACATCCC-----------------------------------------CATCATATC-TATCT
droWil2	scf2_1100000004511:1092695-1092859 +	dwi-mir-316	Known_mirbase	-AAT--GTATG--------------------------------------------------------------------------------------TAT-AAATTCTAGTCGATTTGTCTTTTTCCGCTTACTGGCGTTTTATTTAACTAACGACAGGAAAGGGAAAAAGGCGTATTTACTATGAGTTTAATCAACAAATTCT---CCACA---------------------AAAT----CTCTACAAC--------------------------------------TAAGTAAGTATAAACCTATAT-----------------------------AG-------TTATA---TTTAT
droVir3	scaffold_13049:24266793-24267007 +	dvi-mir-316	Known_mirbase	-TCT--ATATGA---------------AAGTATA-------------------CTTAACTTGATTGTATAT------------CT---T---TGATCTATAAAGTTCTAGTCGATTTGTCTTTTTCCGCTTACTGGCGTTTTATT-GAGCAACGACAGGAAAGGGAAAAAGGCGTATTTACTATGAATTTGTTCAACCAATC----------------TGT----------TTAAAC----ACCT--ATTCAATGAAAAGAAATGCTAATCATACAAATAGAGATCAACTGGTGAGTA--GC-------------------------------------------------------CCT
droMoj3	scaffold_6680:18891184-18891325 +	dmo-mir-316	Known_mirbase	-ATC-----------TAACTGAAT---------------------------------------------------C-----------GATTTT--TATATAAAGTTCTAGTCGATTTGTCTTTTTCCGCTTACTGACGTTTTATT-GAACAACGGCAGGGAAGGGAAAAAGGCGTATTTACTATGAATTATTTCAACGATATAAA--------------------AATT-------------TCT--AT---------------------------------------------------------------------------------------------------T-------AAAA
droGri2	scaffold_15110:9481976-9482191 -	dgr-mir-316	Known_mirbase	-CCAGAGA--------------CT---A--------------AACATTTTGTGTATAA--GTATTGTA-------TGATTAAGC---AA-----TCTTCA-GAGTTCTAGTCGATTTGTCTTTTTCCGCTTACTGGCGTTTTATT-GAGCAACGACAGGAAAGGGAAAAAGGCGTATTTACTATGAATGTAATCAACAAACC--------------------------TATTCAAAT----ATCT--AT------------AAAGCT--------------AGAACAACTGGTGAGTA--ACCCTCTAT-----------------------------AC-C---TTTTATATTGCTTTT

Re-alignment of all predicted orthologs with sRNA reads

Species

Read alignment

droAna3

-GCCAAGT--CT---------------AAGTATAAAACGATAGTGCTTT---------------------TCTTCA-----------AGAACATATATTC-AAATTCTAGTCGATTTGTCTTTTTCCGCTTACTGGCGTTTAATTCAAACAACGACAGGAAAGGGAAAAAGGCGTATTTACTATGAGTTTGGTCAACATTTCGT---------------------------CAAAGT----CTAA--AT------------------------------------------------------------TAAAAAATG--------------------------TCATCATCAA-TATCT	Size	Hit Count	Total Norm	Total	M044 Female-body	M058 Embryo	V039 Embryo	V055 Head	V105 Male-body	V106 Head
....................................................................................................................TGTCTTTTTCCGCTTACTGGCG..............................................................................................................................................................................................................................	22	1	19287.00	19287	16815	447	189	751	454	631
....................................................................................................................TGTCTTTTTCCGCTTACTGG................................................................................................................................................................................................................................	20	1	10371.00	10371	10172	83	0	14	30	72
....................................................................................................................TGTCTTTTTCCGCTTACTGGC...............................................................................................................................................................................................................................	21	1	5346.00	5346	4980	213	16	31	27	79
....................................................................................................................TGTCTTTTTCCGCTTACTGGCGT.............................................................................................................................................................................................................................	23	1	3307.00	3307	1797	243	35	208	908	116
.....................................................................................................................GTCTTTTTCCGCTTACTGGCG..............................................................................................................................................................................................................................	21	1	1394.00	1394	1390	1	0	2	0	1
.....................................................................................................................GTCTTTTTCCGCTTACTGG................................................................................................................................................................................................................................	19	1	667.00	667	667	0	0	0	0	0
....................................................................................................................TGTCTTTTTCCGCTTACTGGCT..............................................................................................................................................................................................................................	22	1	495.00	495	447	1	2	17	16	12
..........................................................................................................................................................ACAGGAAAGGGAAAAAGGCGTA........................................................................................................................................................................................	22	1	405.00	405	178	142	5	5	67	8
.....................................................................................................................GTCTTTTTCCGCTTACTGGC...............................................................................................................................................................................................................................	20	1	353.00	353	353	0	0	0	0	0
....................................................................................................................TGTCTTTTTCCGCTTACTGGCGTT............................................................................................................................................................................................................................	24	1	264.00	264	139	14	0	13	77	21
....................................................................................................................TGTCTTTTTCCGCTTACTG.................................................................................................................................................................................................................................	19	1	228.00	228	224	0	1	0	1	2
..........................................................................................................................................................ACAGGAAAGGGAAAAAGG............................................................................................................................................................................................	18	1	151.00	151	48	0	2	3	88	10
....................................................................................................................TGTCTTTTTCCGCTTACTGGT...............................................................................................................................................................................................................................	21	1	145.00	145	137	0	1	2	2	3
....................................................................................................................TGTCTTTTTCCGCTTACTGGCA..............................................................................................................................................................................................................................	22	1	114.00	114	99	2	0	4	1	8
.....................................................................................................................GTCTTTTTCCGCTTACTGGCGT.............................................................................................................................................................................................................................	22	1	112.00	112	110	2	0	0	0	0
....................................................................................................................TGTCTTTTTCCGCTTACTGGCGA.............................................................................................................................................................................................................................	23	1	83.00	83	55	1	0	7	1	19
....................................................................................................................TGTCTTTTTCCGCTTACTGGCGTTT...........................................................................................................................................................................................................................	25	1	70.00	70	40	0	0	5	21	4
....................................................................................................................TGTCTTTTTCCGCTTACTGGCGC.............................................................................................................................................................................................................................	23	1	69.00	69	3	61	0	5	0	0
......................................................................................................................TCTTTTTCCGCTTACTGGCG..............................................................................................................................................................................................................................	20	1	67.00	67	66	1	0	0	0	0
.......................................................................................................................CTTTTTCCGCTTACTGGCG..............................................................................................................................................................................................................................	19	1	63.00	63	60	1	0	2	0	0
....................................................................................................................TGTCTTTTTCCGCTTACTGGA...............................................................................................................................................................................................................................	21	1	63.00	63	59	0	0	0	0	4
.........................................................................................................................................................GACAGGAAAGGGAAAAAGGCGTA........................................................................................................................................................................................	23	1	54.00	54	11	22	4	0	11	6
..........................................................................................................................................................ACAGGAAAGGGAAAAAGGCGT.........................................................................................................................................................................................	21	1	51.00	51	23	17	0	1	10	0
........................................................................................................................TTTTTCCGCTTACTGGCG..............................................................................................................................................................................................................................	18	1	38.00	38	31	7	0	0	0	0
....................................................................................................................TGTCTTTTTCCGCTTACTGT................................................................................................................................................................................................................................	20	1	37.00	37	34	0	0	0	1	2
..........................................................................................................................................................ACAGGAAAGGGAAAAAGGC...........................................................................................................................................................................................	19	1	36.00	36	11	5	0	0	19	1
....................................................................................................................TGTCTTTTTCCGCTTACT..................................................................................................................................................................................................................................	18	1	36.00	36	36	0	0	0	0	0
....................................................................................................................TGTCTTTTTCCGCTTACTGGCGG.............................................................................................................................................................................................................................	23	1	33.00	33	33	0	0	0	0	0
.....................................................................................................................GTCTTTTTCCGCTTACTGGCT..............................................................................................................................................................................................................................	21	1	33.00	33	33	0	0	0	0	0
......................................................................................................................TCTTTTTCCGCTTACTGG................................................................................................................................................................................................................................	18	1	31.00	31	31	0	0	0	0	0
..........................................................................................................................................................ACAGGAAAGGGAAAAAGGCG..........................................................................................................................................................................................	20	1	30.00	30	21	1	0	0	7	1
.........................................................................................................................................................GACAGGAAAGGGAAAAAGG............................................................................................................................................................................................	19	1	24.00	24	5	0	0	0	19	0
.......................................................................................................................CTTTTTCCGCTTACTGGC...............................................................................................................................................................................................................................	18	1	23.00	23	23	0	0	0	0	0
......................................................................................................................TCTTTTTCCGCTTACTGGC...............................................................................................................................................................................................................................	19	1	23.00	23	22	1	0	0	0	0
....................................................................................................................TGTCTTTTTCCGCTTACTGGCC..............................................................................................................................................................................................................................	22	1	20.00	20	8	12	0	0	0	0
....................................................................................................................TGTCTTTTTCCGCTTACTGGCGTA............................................................................................................................................................................................................................	24	1	19.00	19	8	0	0	3	6	2
.........................................................................................................................................................GACAGGAAAGGGAAAAAGGCGT.........................................................................................................................................................................................	22	1	19.00	19	10	3	0	0	4	2
....................................................................................................................TGTCTTTTTCCGCTTACTGGCGTTA...........................................................................................................................................................................................................................	25	1	17.00	17	11	0	0	1	5	0
...........................................................................................................................................................CAGGAAAGGGAAAAAGGCGTA........................................................................................................................................................................................	21	1	17.00	17	14	3	0	0	0	0
..........................................................................................................................................................ACAGGAAAGGGAAAAAGGT...........................................................................................................................................................................................	19	2	16.00	32	17	0	0	0	15	0
..........................................................................................................................................................ACAGGAAAGGGAAAAAGGCGTAT.......................................................................................................................................................................................	23	1	14.00	14	11	1	1	0	1	0
...................................................................................................................TTGTCTTTTTCCGCTTACTGGCG..............................................................................................................................................................................................................................	23	1	13.00	13	13	0	0	0	0	0
.....................................................................................................................GTCTTTTTCCGCTTACTGGCGTT............................................................................................................................................................................................................................	23	1	13.00	13	10	1	0	0	2	0
.........................................................................................................................................................GACAGGAAAGGGAAAAAGGCG..........................................................................................................................................................................................	21	1	12.00	12	9	0	0	0	3	0
....................................................................................................................TGTCTTTTTCCGCTTACTGGTT..............................................................................................................................................................................................................................	22	1	12.00	12	11	0	0	0	1	0
....................................................................................................................TGTCTTTTTCCGCTTACTGA................................................................................................................................................................................................................................	20	1	11.00	11	11	0	0	0	0	0
.....................................................................................................................GTCTTTTTCCGCTTACTGGCA..............................................................................................................................................................................................................................	21	1	11.00	11	11	0	0	0	0	0
.....................................................................................................................GTCTTTTTCCGCTTACTG.................................................................................................................................................................................................................................	18	1	11.00	11	11	0	0	0	0	0
.....................................................................................................................GTCTTTTTCCGCTTACTGGA...............................................................................................................................................................................................................................	20	1	10.00	10	10	0	0	0	0	0
....................................................................................................................TGTCTTTTTCCGCTTACTGGCGAA............................................................................................................................................................................................................................	24	1	10.00	10	4	0	0	1	1	4
...................................................................................................................TTGTCTTTTTCCGCTTACTGG................................................................................................................................................................................................................................	21	1	9.00	9	9	0	0	0	0	0
.....................................................................................................................GTCTTTTTCCGCTTACTGGCGG.............................................................................................................................................................................................................................	22	1	9.00	9	9	0	0	0	0	0
..........................................................................................................................................................ACAGGAAAGGGAAAAAGGCGTT........................................................................................................................................................................................	22	1	8.00	8	6	1	0	0	1	0
....................................................................................................................TGTCTTTTTCCGCTTACTGC................................................................................................................................................................................................................................	20	1	8.00	8	6	1	0	0	0	1
..........................................................................................................................................................ACAGGAAAGGGAAAAAGGCGTAA.......................................................................................................................................................................................	23	1	8.00	8	5	1	0	0	1	1
....................................................................................................................TGTCTTTTTCCGCTTACTGCG...............................................................................................................................................................................................................................	21	1	7.00	7	6	0	0	0	0	1
.........................................................................................................................................................GACAGGAAAGGGAAAAAGGC...........................................................................................................................................................................................	20	1	6.00	6	0	1	0	0	5	0
....................................................................................................................TGTCTTTTTCCGCTTACTGGG...............................................................................................................................................................................................................................	21	1	6.00	6	3	3	0	0	0	0
.......................................................................................................................CTTTTTCCGCTTACTGGCGT.............................................................................................................................................................................................................................	20	1	6.00	6	3	3	0	0	0	0
.....................................................................................................................GTCTTTTTCCGCTTACTGGCGA.............................................................................................................................................................................................................................	22	1	5.00	5	5	0	0	0	0	0
....................................................................................................................TGTCTTTTTCCGCTTACTGGCGTAG...........................................................................................................................................................................................................................	25	1	5.00	5	5	0	0	0	0	0
..........................................................................................................................................................ACAGGAAAGGGAAAAAGGA...........................................................................................................................................................................................	19	1	5.00	5	1	0	0	1	3	0
....................................................................................................................TGTCTTTTTCCGCTTACTGGAA..............................................................................................................................................................................................................................	22	1	5.00	5	4	0	0	0	0	1
........................................................................................................................TTTTTCCGCTTACTGGCGC.............................................................................................................................................................................................................................	19	1	4.00	4	0	4	0	0	0	0
........................................................................................................................TTTTTCCGCTTACTGGCGT.............................................................................................................................................................................................................................	19	1	4.00	4	3	0	0	1	0	0
.....................................................................................................................GTCTTTTTCCGCTTACTGGT...............................................................................................................................................................................................................................	20	1	4.00	4	4	0	0	0	0	0
........................................................................................................................................................CGACAGGAAAGGGAAAAAGGCGTA........................................................................................................................................................................................	24	1	4.00	4	1	3	0	0	0	0
.........................................................................................................................TTTTCCGCTTACTGGCGT.............................................................................................................................................................................................................................	18	1	4.00	4	2	2	0	0	0	0
....................................................................................................................TGTCTTTTTCCGCTTACTGGCGTTTA..........................................................................................................................................................................................................................	26	1	4.00	4	4	0	0	0	0	0
....................................................................................................................TGTCTTTTTCCGCTTACTGGCGTAA...........................................................................................................................................................................................................................	25	1	4.00	4	1	0	0	1	1	1
....................................................................................................................TGTCTTTTTCCGCTTACTGGCGTC............................................................................................................................................................................................................................	24	1	4.00	4	2	2	0	0	0	0
....................................................................................................................TGTCTTTTTCCGCTTACTGGAC..............................................................................................................................................................................................................................	22	1	3.00	3	0	2	0	0	0	1
....................................................................................................................TGTCTTTTTCCGCTTACTGGTA..............................................................................................................................................................................................................................	22	1	3.00	3	3	0	0	0	0	0
....................................................................................................................TGTCTTTTTCCGCTTACTGGCGTTAT..........................................................................................................................................................................................................................	26	1	3.00	3	3	0	0	0	0	0
....................................................................................................................TGTCTTTTTCCGCTTACTGGCAG.............................................................................................................................................................................................................................	23	1	3.00	3	3	0	0	0	0	0
......................................................................................................................TCTTTTTCCGCTTACTGGCGT.............................................................................................................................................................................................................................	21	1	3.00	3	3	0	0	0	0	0
....................................................................................................................TGTCTTTTTCCGCTTACTGGCGTTG...........................................................................................................................................................................................................................	25	1	3.00	3	3	0	0	0	0	0
....................................................................................................................TGTCTTTTTCCGCTTACTGGCTG.............................................................................................................................................................................................................................	23	1	3.00	3	3	0	0	0	0	0
....................................................................................................................TGTCTTTTTCCGCTTACTGGCGTTTT..........................................................................................................................................................................................................................	26	1	3.00	3	3	0	0	0	0	0
..........................................................................................................................................................ACAGGAAAGGGAAAAAGGCTA.........................................................................................................................................................................................	21	1	3.00	3	0	0	0	0	0	3
...................................................................................................................TTGTCTTTTTCCGCTTACTGGC...............................................................................................................................................................................................................................	22	1	3.00	3	2	1	0	0	0	0
.....................................................................................................................GTCTTTTTCCGCTTACTGGCGC.............................................................................................................................................................................................................................	22	1	2.00	2	2	0	0	0	0	0
.............................................................................................................................................................GGAAAGGGAAAAAGGCGTA........................................................................................................................................................................................	19	1	2.00	2	1	1	0	0	0	0
..........................................................................................................................................................ACAGGAAAGGGAAAAAGGCGC.........................................................................................................................................................................................	21	1	2.00	2	0	2	0	0	0	0

droBip1

-GCCAAGT--CTA-----------------------------GTGCTTTT-------------TTTTC-------AAA---------GATATACATATTC-AAATTCTAGTCGATTTGTCTTTTTCCGCTTACTGGCGTTTAATTCAAACAACGACAGGAAAGGGAAAAAGGCGTATTTACTATGAGTTTGGTCAACATTTCGAC--------------------A-------ACGT----CTAA--TT------------------------------------------------------------TAGAACATG--------------------------TCATCATGAA-AGTCT	Size	Hit Count	Total Norm	Total
No Reads

droKik1

-GCT--ATATCTCGCGCATCGGGTATAG-----------------------------AGTATATAGTA--------TA-TATACAGTGTAACGTCTATAT-AAATTCTAGTCGATTTGTCTTTTTCCGCTTACTGGCGTTTTATTCGAGCAACGACAGGAAAGGGAAAAAGGCGTATTTACTATGAGTTTGGCCATCAAG-----------------------------------CT----ATCTGTATTCTG----------------------------------------------------------------------------------------------TGATA---TATGA	Size	Hit Count	Total Norm	Total
No Reads

droFic1

-TCT--GTATGTGTCGGATAGACT---------------------------------------------------A-----------AAAGTTAATGCAT-AAATTCTAGTCGATTTGTCTTTTTCCGCTTACTGAAGTTTTATTTGAACAACGTCAGGAAAGGGAAAAAGGCGTATTTACTAAGAGTTTGGCCATCAGTTTCAC---------------CTTCAACGGAG----CA----ATGTG--------------------------------------------------TCCACT-----------------------------------------------------CCTCT	Size	Hit Count	Total Norm	Total
No Reads

droEle1

-TCG--CTATGTGTCCGACGGACT---------------------------------------------------A-----------AAAGTGTATACAT-AAATTCTAGTCGATTTGTCTTTTTCCGCTTACTGGCGTTTCATTTCAAAAACGACAGGAAAGGGAAAAAGGCGTATTTACTAAGAGTTTGACCAGCAATTTGCA--------------------CCCAATCAAGCT----ATTGACATC--------------------------------------CATGTAAGTATGTTTC-----------------------------------------CATT-------GTCT	Size	Hit Count	Total Norm	Total
No Reads

droRho1

-TCG--GTATGTGTCGAATAAACT---------------------------------------------------A-----------AAAGTGTATATAT-AAATTCTAGTCGATTTGTCTTTTTCCGCTTACTGGCGTTTTATTTAAACAACGACAGGAAAGGGAAAAAGGCGTATTTACTATGAGTTTGGCCAACAATT-GCA--------------------AGTAATAAAGCT----ATCTGCATT--------------------------------------CCTGTAAGTATGTTCC-----------------------------------------CATTATCTTGCGCAT	Size	Hit Count	Total Norm	Total
No Reads

droBia1

-TCG--GGATTCGTCGAGCAGGCC---------------------------------------------------A-----------GAAGTGTATACGT-AAATTCTAGTCGATTTGTCTTTTTCCGCTTACTGGCGTTTCATTTACACAACGACAGGAAAGGGAAAAAGGCGTATTTACTACGAGTTTGACCAACGATTTGCA--------------------GGTGAC------------------------------------------------------------------------------------------------------------------------------TCT	Size	Hit Count	Total Norm	Total
No Reads

droTak1

ATCG--GTATTTGC--------CT---------------------------------------------------A-----------AAAGTGTACACAT-AAATTCTAGTCGATTTGTCTTTTTCCGCTTACTGGCGTTTTATATTAACAACGACAGGAAAGGGAAAAAGGCGTATTTACTATGAGTTTGGCCAACAATTTCCA--------------------GGTGATCAGGCT----ATATAA--------------------------------------------------------------------------------------------G-------CCCCG---TGTGT	Size	Hit Count	Total Norm	Total
No Reads

droEug1

-TCG--GTATGTGTCGATCAGGCT-----------------------AT---------A-------T----------------CAGTGTACTATATATCT-AAATTCTAGTCGATTTGTCTTTTTCCGCTTACTGGCGTTTCATTTAAACAACGACAGGAAAGGGAAAAAGGCGTATTTACTAAGAGTTTTGCCAACGATTCGCA--------------------GTTGGTCATTCTAAACA----------------------------------------------------------------------------------------------------------CCTAAA-TATCT	Size	Hit Count	Total Norm	Total
No Reads

dm3

-TCG--GTATGTG--------------------------------------------------------------A-----------AAAGTGGATACAC-AAATTCTAGTCGATTTGTCTTTTTCCGCTTACTGGCGTTTCAATTCCACAACGACAGGAAAGGGAAAAAGGCGTATTTACTATGAGTTTGCTCAGCGATTTGCA--------------------GGTGATCCAGGT----GTAT--AT------------AG-------------------------------------------------------TA------------TTAGTAAG---------------TATTT	Size	Hit Count	Total Norm	Total	GSM154618 Ovary	GSM154620 Ovary	GSM154621 Ovary	GSM154622 Ovary	GSM180328 Head	GSM180329 Mixed-body	GSM180330 Embryo	GSM180331 Embryo	GSM180332 Embryo	GSM180333 Embryo	GSM180334 Larvae	GSM180335 Disc	GSM180336 Pupae	GSM180337 S2	GSM239041 Head	GSM239050 Head	GSM239051 S2	GSM239052 S2	GSM246084 Head	GSM266765 S2	GSM280082 Ovary	GSM280083 Ovary	GSM280084 Ovary	GSM280085 Testis	GSM280086 Ovary	GSM280087 S2-NP	GSM280088 S2-NP	GSM312995 Head	GSM313160 Head	GSM313161 Head	GSM313162 Head	GSM313163 Head	GSM313164 Head	GSM313165 Head	GSM343287 Embryo	GSM379050 Ovary	GSM379051 Ovary	GSM379052 Ovary	GSM379053 Ovary	GSM379054 Ovary	GSM379055 Ovary	GSM379056 Ovary	GSM379057 Ovary	GSM379058 Ovary	GSM379059 Ovary	GSM379060 Ovary	GSM379061 Ovary	GSM379062 Ovary	GSM379063 Ovary	GSM379064 Ovary	GSM379065 Ovary	GSM379066 Ovary	GSM379067 Ovary	GSM424739 S2	GSM424740 S2	GSM424741 S2	GSM467729 Female-body	GSM467730 Female-body	GSM467731 Female-body	M002 CS	M003 Male-body	M004 Male-body	M005 ML-DmD32	M006 ML-DmD32	M029 OSC	M030 OSC	M031 OSC	M032 S2-R+	M033 S2-R+	M034 S2-R+	M035 S2-R+	M036 S2-R+	M037 S2-R+	M038 S2-R+	M039 S2-R+	M048 S2-R+	OSS2 OSS	OSS6 OSS	OSS7 OSS	OSS8 OSS	S1 Head	S10 Embryo	S11 Embryo	S12 Embryo	S13 Embryo	S14 Embryo	S15 S2-GMR	S16 Kc	S17 Larvae	S18 Larvae	S19 Pupae	S2 Head	S20 Pupae	S21 Disc	S22 Head	S23 Female-body	S24 Male-body	S25 Larvae	S26 Larvae	S27 Pupae	S28 Pupae	S29 Head	S3 Male-body	S30 S2-GMR	S31 S2	S32 S2	S33 Kc	S34 Kc	S35 Kc	S4 Female-body	S5 Disc	S6 Embryo	S7 Embryo	S8 S2	S9 Embryo	SRR001337 Head	SRR001338 Head	SRR001339 Head	SRR001340 Head	SRR001341 Head	SRR001342 Head	SRR001343 Head	SRR001344 Head	SRR001345 Head	SRR001346 Head	SRR001347 Head	SRR001348 Head	SRR001349 Head	SRR001664 Head	SRR010951 Ovary	SRR010952 Ovary	SRR010953 Ovary	SRR010954 Ovary	SRR010955 Ovary	SRR010956 Ovary	SRR010957 Ovary	SRR010958 Ovary	SRR010959 Ovary	SRR010960 Ovary	SRR014268 Embryo	SRR014269 Embryo	SRR014270 Embryo	SRR014271 Embryo	SRR014272 Embryo	SRR014273 Ovary	SRR014274 Ovary	SRR014275 Ovary	SRR014276 Ovary	SRR014277 Ovary	SRR014278 Ovary	SRR014279 Ovary	SRR014280 Ovary	SRR014281 Ovary	SRR014282 Ovary	SRR023197 S2	SRR023399 S2	SRR023400 S2	SRR023402 S2	SRR023407 S2	SRR029028 S2	SRR029029 S2	SRR029030 S2	SRR029031 S2	SRR029032 S2	SRR029033 S2	SRR029608 Head	SRR029633 Head	SRR030145 gb3	SRR031692 Head	SRR031693 Head	SRR031694 Head	SRR031696 Head	SRR031697 Head	SRR031698 Head	SRR031699 Head	SRR031700 Head	SRR031701 Head	SRR031702 Head	SRR031703 Head	SRR031704 Head	SRR032092 S2	SRR032093 S2	SRR032094 S2	SRR032095 S2-NP	SRR032096 S2-NP	SRR032152 Head	SRR060643 Testis	SRR060644 Ovary	SRR060645 Testis	SRR060646 Ovary	SRR060647 Ovary	SRR060648 Ovary	SRR060649 Ovary	SRR060650 Testis	SRR060651 Ovary	SRR060652 Testis	SRR060653 Ovary	SRR065151 Ovary	SRR065152 Ovary	SRR065153 Ovary	SRR065154 Ovary	SRR065155 Ovary	SRR065800 Ovary	SRR065801 Ovary	SRR065802 Ovary	SRR065803 Ovary	SRR065804 Ovary	SRR065805 Ovary	SRR065806 Ovary	SRR065807 Ovary	SRR097865 S2-NP	SRR097866 S2-NP	SRR097867 S2-NP	SRR298536 Ovary	SRR298537 Ovary	SRR298711 Ovary	SRR298712 Ovary	SRR317110 Ovary	SRR317111 Ovary	SRR317112 Ovary	SRR317113 Ovary	SRR317114 Ovary	SRR317115 Ovary	SRR317116 Ovary	SRR317117 Ovary	SRR341115 S2	SRR341116 S2	SRR341117 S2	SRR341118 S2	SRR351332 Mixed-body	SRR351333 Mixed-body	T004 OSC	T005 CME-L1	V001 Embryo	V002 Embryo	V003 S2	V006 Female-body	V007 Head	V008 S2	V009 CME-L1	V010 ML-DmD20-C5	V011 Sg4	V012 Male-body	V013 Head	V014 DTT	V015 DreRFHV	V018 Kc167	V019 GM2	V020 S2-R+	V021 ML-DmD21	V022 ML-DmD32	V023 Head	V024 Kc167	V025 S2-R+	V026 1182-2H	V027 ML-DmD21	V028 CME-W1-Cl.8+	V029 ML-DmD9	V030 ML-DmD8	V031 GM2	V032 S1	V033 CME-W1-Cl.8+	V034 ML-DmD16-C3	V035 ML-DmD32	V036 ML-DmD20-C5	V037 S2	V038 S2	V063 Ovary	V0632 Ovary	V064 Ovary	V0642 Ovary	V065 Ovary	V0652 Ovary	V066 Ovary	V0662 Ovary	V067 S2-NP	V073 mbn2	V074 S3	V075 ML-DmBG1-C1	V076 ML-DmBG3-C2	V077 Head	V078 Head	V079 Head	V080 Head	V081 Embryo	V082 Embryo	V083 Male-body	V084 Female-body	V085 CME-W2	V086 Female-body	V088 Ovary	V0882 Ovary	V089 Ovary	V0892 Ovary	V090 Male-body	V091 fGS/OSS	V092 Male-body	V093 Male-body	V094 S2-R+	V095 S2-R+	V096 Ovary	V097 Ovary	V098 Ovary	V125 ML-DmD9	V126 CME-L1	V127 G2	V128 S3	V129 ML-DmBG1-C1	V130 ML-DmBG3-C2	V131 ML-DmD16-C3	V132 ML-DmD32	V133 Sg4	V134 ML-DmD8	V135 CME-W2	V136 Male-body	V137 Head	V138 Male-body	V139 Female-body	V140 Female-body	V141 Female-body	V142 Female-body	V144 OSC	V145 S2	V146 S1	V147 1182-2H	V148 mbn2	GSM1528798 follicle cells
....................................................................................................................TGTCTTTTTCCGCTTACTGGCG..............................................................................................................................................................................................................................	22	1	269142.00	269142	0	0	1	0	9	34	1	0	7	63	17	3	13	0	5	0	0	11	3	0	264	161	170	2904	0	1	0	3	4	26	438	605	1	1	0	406	1251	670	763	669	383	1035	4368	222	5090	471	360	348	880	1640	3105	566	265	0	0	0	140	80	34	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	45	16	3	129	180	1	0	0	76	44	181	122	25	32	122	486	1382	38	12	110	268	457	123	2	0	5	7	12	28	127	18	89	267	3	175	24	327	388	3	54	1	149	133	506	6	454	49	313	375	0	0	0	0	5	2	7	4	77	1	13	3	19	11	9	594	663	677	422	651	32940	245	397	581	475	0	0	0	0	0	0	4	0	0	4	0	849	949	0	594	5	3	741	708	28	486	6	408	8	608	72	20	0	20	0	0	2192	2309	1186	1010	338	15	4	0	1315	21	398	103	0	0	0	0	0	281	214	0	0	3	0	2	17	0	0	1	4554	19602	2513	3500	7210	10364	6058	14876	3520	9738	7838	10677	0	0	0	1	0	1	0	0	1230	1408	1	966	300	8	3	0	12	3004	353	3	1926	0	0	4	0	0	206	0	0	0	0	0	3	0	0	1	0	8	3	0	0	0	1662	7280	1194	5149	2388	13524	1538	9886	0	0	0	0	0	319	454	398	493	112	5878	635	445	4	385	3077	6157	404	578	753	0	536	820	2	5	848	1027	1728	1	0	0	0	0	0	1	0	0	0	0	382	152	788	329	1001	621	712	1	0	1	0	0	7
....................................................................................................................TGTCTTTTTCCGCTTACTGGCGT.............................................................................................................................................................................................................................	23	1	85039.00	85039	0	0	0	0	0	3	0	0	2	6	0	0	1	0	1	0	0	0	1	0	41	32	87	98	1	1	0	0	0	1	68	97	0	0	0	59	225	93	121	121	73	145	605	40	380	105	190	70	296	290	566	149	58	0	0	0	75	56	22	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	4	29	36	0	0	0	5	5	20	7	2	5	14	47	126	4	0	5	28	26	6	0	0	0	0	3	3	19	4	13	44	1	26	0	36	12	0	3	0	6	9	33	0	69	4	44	52	0	0	0	0	4	3	4	0	11	0	3	4	9	22	0	212	254	244	224	211	7923	81	107	265	133	0	0	0	0	0	0	0	0	0	0	0	115	114	0	83	1	0	96	110	2	73	1	63	2	61	11	0	0	1	0	0	311	680	341	508	289	13	3	2	457	7	269	166	0	0	0	0	0	138	87	2	5	4	2	0	34	0	0	0	1134	4455	1126	1981	1817	2110	3087	7027	847	1715	1774	2310	0	0	0	1	0	0	0	0	1073	785	1	112	24	0	0	0	2	208	20	0	131	0	0	3	0	0	27	0	0	0	0	0	2	0	2	0	0	2	0	0	0	0	353	1703	241	1151	557	3495	366	2126	0	0	1	0	0	122	253	205	201	259	7594	935	905	2	346	776	1674	511	734	693	1	647	856	0	2	608	1077	2280	0	0	0	0	0	0	4	0	0	0	1	537	136	602	326	1014	577	686	0	0	0	0	0	9
....................................................................................................................TGTCTTTTTCCGCTTACTGGC...............................................................................................................................................................................................................................	21	1	50168.00	50168	0	0	0	0	2	1	0	0	0	5	1	1	1	0	3	0	1	4	2	0	2	2	29	1156	0	0	0	3	3	6	95	119	2	3	0	44	96	98	83	58	22	29	306	21	388	32	37	18	58	126	147	19	7	0	0	0	113	89	20	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	6	3	0	1	1	0	0	0	7	4	26	20	2	4	57	112	164	0	0	33	41	82	15	0	0	6	0	1	9	17	1	5	10	1	40	14	154	213	1	64	0	116	69	209	6	105	14	98	109	0	0	4	6	1	1	3	3	46	1	0	2	0	0	0	61	25	44	22	49	1284	17	22	13	25	0	0	0	0	0	0	0	0	0	0	0	205	332	0	200	5	4	69	138	6	106	3	141	7	137	21	0	0	0	0	0	221	29	15	27	17	0	0	0	22	0	14	23	0	0	0	0	1	4	3	0	0	0	0	0	0	0	0	0	277	1188	160	161	4623	6776	3288	5247	3699	5786	2797	3837	0	0	0	1	0	0	0	0	18	12	0	60	36	1	0	0	1	798	306	2	706	0	0	0	0	0	38	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	40	147	8	21	18	132	16	104	0	0	0	0	0	64	46	100	91	0	46	30	17	0	74	87	149	24	25	31	0	18	20	0	1	26	48	68	0	0	0	0	0	0	0	0	0	0	0	61	31	112	40	63	50	65	0	0	0	0	0	5
....................................................................................................................TGTCTTTTTCCGCTTACTGG................................................................................................................................................................................................................................	20	1	24999.00	24999	0	0	0	0	1	1	0	0	0	0	0	0	2	0	1	0	0	1	0	0	2	6	7	232	0	0	0	0	0	0	0	0	0	0	2	10	17	30	19	23	1	9	84	10	117	9	7	3	7	43	50	4	2	0	0	0	111	73	26	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	6	0	13	8	1	0	5	26	50	0	0	4	9	48	7	0	0	1	0	1	7	6	0	1	1	1	9	2	113	24	1	11	1	28	7	20	0	37	13	71	66	0	0	1	3	0	0	1	1	0	0	0	0	0	0	0	13	4	15	6	6	305	6	4	5	2	0	0	0	0	0	0	0	0	0	0	0	149	268	0	104	0	1	48	116	10	84	6	167	6	179	9	0	0	0	0	0	227	19	13	18	6	0	0	0	8	0	4	9	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	60	219	54	75	2020	3813	1063	2280	2243	5141	1265	1577	0	0	0	0	0	0	0	0	4	6	0	1	7	2	0	0	1	79	182	0	140	0	0	0	0	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	28	130	9	35	11	101	15	105	0	0	0	0	0	62	48	118	171	0	7	13	5	0	57	3	65	1	12	2	0	1	0	0	0	11	33	32	0	0	0	0	0	0	0	0	0	0	0	48	95	62	24	29	44	52	0	0	1	0	0	0
..........................................................................................................................................................ACAGGAAAGGGAAAAAGGCGTA........................................................................................................................................................................................	22	1	19133.00	19133	0	0	0	0	1	1	0	0	3	9	0	0	2	0	2	0	0	0	0	0	14	7	4	3	0	0	0	0	1	0	0	0	0	0	0	10	23	14	6	13	11	1	23	11	31	20	64	14	6	11	14	22	11	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	3	0	190	57	0	0	0	37	4	106	3	3	1	2	31	20	7	1	49	80	28	3	0	0	1	0	2	5	5	1	20	28	0	31	0	4	0	0	0	0	4	0	0	0	2	0	2	0	0	0	0	0	7	1	0	0	0	0	0	0	2	7	1	26	51	58	54	70	431	33	29	23	24	0	0	0	0	0	0	0	0	0	0	0	18	18	0	20	1	0	4	21	8	13	1	12	0	35	2	26	0	0	0	0	1	44	17	144	50	7	0	0	35	6	307	76	0	2	0	0	0	73	90	1	8	12	6	2	6	0	0	0	226	1078	309	701	929	990	1225	3483	922	1236	1128	629	0	0	0	0	5	2	0	0	30	35	0	6	0	0	0	0	0	27	4	0	10	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	18	109	32	125	30	209	14	101	0	0	0	0	0	2	3	2	1	270	194	36	19	0	7	18	133	74	230	27	0	19	23	0	0	129	303	495	0	0	0	0	0	0	6	0	0	1	0	91	10	49	86	118	56	137	1	0	0	0	0	11
....................................................................................................................TGTCTTTTTCCGCTTACTGGCGA.............................................................................................................................................................................................................................	23	1	4934.00	4934	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	2	3	1	9	0	0	0	0	0	0	0	0	0	0	0	3	9	17	15	9	0	30	105	6	49	6	2	15	9	39	46	3	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	5	0	0	2	2	14	0	0	0	2	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	22	2	0	2	0	5	2	4	0	16	3	19	25	0	0	0	0	0	0	2	0	2	0	0	0	0	0	0	18	7	11	6	15	231	6	3	4	5	0	0	0	0	0	0	0	0	0	0	0	40	56	0	30	0	0	28	20	0	37	0	33	0	51	0	0	0	0	0	0	115	31	22	10	2	0	0	0	33	1	11	1	0	0	0	0	0	4	6	0	0	0	0	0	0	0	0	0	22	111	32	67	171	305	152	358	94	193	98	247	0	0	0	0	6	8	0	0	4	2	0	8	26	0	0	0	0	38	19	0	32	0	0	0	0	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	30	198	30	213	32	218	28	162	0	0	0	0	0	42	48	55	67	0	10	10	7	0	15	52	122	6	22	19	0	10	12	0	0	12	10	34	0	0	0	0	0	0	0	0	0	0	0	12	11	20	13	28	17	25	0	0	0	0	0	0
....................................................................................................................TGTCTTTTTCCGCTTACTGGCGTT............................................................................................................................................................................................................................	24	1	4337.00	4337	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	5	24	0	0	0	0	0	0	0	0	0	0	0	0	4	10	5	6	4	3	15	51	3	26	9	8	4	11	31	56	10	6	0	0	0	15	8	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	1	0	0	0	0	0	1	0	0	0	1	1	3	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	4	0	1	0	2	0	5	0	2	0	2	1	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	25	18	14	20	14	514	10	9	36	14	0	0	0	0	0	0	0	0	0	0	0	2	6	0	4	0	0	2	3	0	3	0	5	0	0	0	8	0	0	0	0	21	44	11	28	16	0	0	0	21	1	26	2	0	0	0	0	0	4	7	0	0	0	0	0	0	0	0	0	49	317	46	61	65	66	94	196	36	45	79	82	0	0	0	0	0	0	0	0	38	35	0	6	3	0	0	0	0	9	0	0	2	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	13	65	6	47	26	172	15	84	0	0	0	0	0	8	9	18	8	19	435	56	45	0	28	49	81	29	34	31	0	40	38	0	0	74	74	143	0	0	0	0	0	0	2	0	0	0	0	25	9	26	25	52	45	24	0	0	0	0	0	14
..........................................................................................................................................................ACAGGAAAGGGAAAAAGGCGT.........................................................................................................................................................................................	21	1	2977.00	2977	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	2	0	1	0	0	0	0	0	0	0	0	0	0	0	6	7	1	5	3	2	0	7	2	12	5	9	3	1	0	2	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	5	0	0	0	3	1	3	0	1	0	1	5	3	1	0	2	3	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	11	3	11	9	18	95	2	6	6	3	0	0	0	0	0	0	0	0	0	0	0	1	1	0	1	1	0	0	1	0	1	0	1	1	2	4	0	0	0	0	0	2	4	5	25	11	0	0	0	7	0	51	3	0	1	0	0	0	8	21	0	1	1	1	3	0	0	0	0	85	146	50	118	174	208	164	583	207	280	156	141	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	3	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	17	2	8	2	12	3	2	0	0	0	0	0	1	0	0	0	3	0	1	1	0	1	5	8	7	12	2	0	0	0	0	0	18	20	29	0	1	0	0	0	0	0	0	0	0	0	7	1	3	20	17	7	20	0	0	0	0	0	0
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....................................................................................................................TGTCTTTTTCCGCTTACTGGCT..............................................................................................................................................................................................................................	22	1	1227.00	1227	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	1	2	3	0	0	0	0	0	0	0	0	0	0	0	8	17	15	20	33	3	13	7	2	16	6	9	0	0	4	17	3	10	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	2	7	0	0	1	1	0	1	0	0	0	0	0	0	0	0	0	0	0	2	1	7	2	0	0	0	0	0	3	0	15	1	6	13	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	6	5	3	1	4	225	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	4	1	0	5	0	0	0	1	0	3	0	3	0	0	0	0	0	0	0	0	3	7	2	8	2	0	0	0	6	0	3	0	0	0	0	0	0	4	2	0	0	0	0	0	1	0	0	0	4	16	4	11	43	58	11	67	35	31	25	42	0	0	0	0	0	0	0	0	11	2	0	13	1	0	0	0	0	38	9	0	9	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	6	26	9	12	1	32	1	28	0	0	0	0	0	2	1	6	7	0	28	8	5	0	9	6	11	0	0	6	0	4	2	0	0	2	5	4	0	0	0	0	0	0	0	0	0	0	0	4	3	6	2	0	0	3	0	0	0	0	0	1
....................................................................................................................TGTCTTTTTCCGCTTACTGGCA..............................................................................................................................................................................................................................	22	1	1055.00	1055	0	0	0	0	2	2	0	0	0	4	0	1	0	0	0	0	0	0	0	0	0	1	0	11	0	0	0	0	0	0	0	0	0	0	0	3	1	5	3	5	1	7	11	2	5	2	0	0	2	1	4	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	1	1	1	0	0	1	1	0	3	0	0	0	0	0	0	0	0	0	3	0	2	0	4	1	0	0	0	3	1	1	0	2	0	7	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	2	62	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	6	6	0	1	0	0	6	3	0	1	0	6	0	10	0	0	0	0	0	0	29	8	1	3	1	0	0	0	2	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	28	3	18	84	101	21	72	50	105	36	68	0	0	0	0	4	1	0	0	0	2	0	2	0	0	0	0	0	10	14	0	17	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	6	23	2	10	5	37	4	17	0	0	0	0	0	3	3	0	2	0	5	1	0	0	2	7	6	0	3	1	0	1	1	0	0	1	3	3	0	0	0	0	0	0	0	0	0	0	0	1	0	2	0	0	0	2	0	0	0	0	0	0
....................................................................................................................TGTCTTTTTCCGCTTACTGGCGTA............................................................................................................................................................................................................................	24	1	813.00	813	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	2	0	1	0	5	6	1	3	2	3	0	2	3	9	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	1	1	1	0	0	0	1	1	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	3	2	3	6	55	4	0	2	4	0	0	0	0	0	0	0	0	0	0	0	1	3	0	2	0	0	0	2	0	0	0	6	0	3	0	0	0	0	0	0	3	10	4	6	1	0	0	0	3	0	5	0	0	0	0	0	0	1	1	0	0	0	0	0	15	0	0	0	7	19	7	15	12	17	29	34	14	8	14	19	0	0	0	0	0	1	0	0	4	0	0	2	4	0	0	0	0	4	3	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	27	2	15	3	36	7	14	0	0	0	0	0	11	11	12	13	1	4	3	9	0	5	13	30	7	14	11	0	18	17	0	0	8	11	30	0	0	0	0	0	0	0	0	0	0	0	3	7	6	6	13	17	15	0	0	0	0	0	0
....................................................................................................................TGTCTTTTTCCGCTTACTGGCGC.............................................................................................................................................................................................................................	23	1	767.00	767	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	10	0	0	0	0	0	0	0	0	0	0	0	0	3	3	3	0	0	2	19	0	18	1	0	1	6	3	10	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	10	1	0	0	0	1	0	0	0	2	0	1	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	1	3	4	2	1	61	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	2	0	1	0	0	1	1	0	0	0	1	1	0	0	0	0	0	0	0	2	4	3	2	2	0	0	0	1	0	3	0	0	0	0	0	0	1	1	0	0	0	1	0	0	0	0	0	5	20	4	9	7	11	9	44	2	4	5	15	0	0	0	0	0	0	0	0	5	4	0	2	2	0	0	0	0	3	2	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	31	0	17	4	82	5	41	0	0	0	0	0	3	3	3	4	1	98	7	9	0	6	22	23	7	3	6	0	4	2	0	0	3	5	7	0	0	0	0	0	0	0	0	0	0	0	3	0	1	1	1	0	4	0	0	0	0	0	0
..........................................................................................................................................................ACAGGAAAGGGAAAAAGGCGTAA.......................................................................................................................................................................................	23	1	572.00	572	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	1	0	1	0	2	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	2	0	3	0	0	0	0	4	1	0	3	2	2	17	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	4	1	4	1	5	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	1	0	0	0	0	1	2	0	0	0	2	0	3	0	0	0	0	0	0	1	3	1	3	2	0	0	0	0	0	6	1	0	0	0	0	0	2	5	0	0	0	0	0	0	0	0	0	6	23	7	17	32	40	28	79	33	51	35	14	0	0	0	0	7	10	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	13	0	2	0	3	0	3	0	0	0	0	0	0	1	0	0	2	0	2	0	0	0	1	1	2	10	0	0	1	0	0	0	4	6	8	0	0	0	0	0	0	0	0	0	0	0	0	1	2	4	5	6	4	0	0	0	0	0	7
....................................................................................................................TGTCTTTTTCCGCTTACTGGCGTTT...........................................................................................................................................................................................................................	25	1	567.00	567	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	33	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	2	1	3	7	0	3	1	5	1	0	5	6	1	0	0	0	0	5	4	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	5	5	2	4	86	0	2	6	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	1	0	0	0	0	1	0	1	0	0	0	0	0	0	0	8	3	7	0	0	0	0	6	0	1	0	0	0	0	0	0	2	1	0	0	0	0	0	0	0	0	0	5	76	7	7	15	13	14	13	9	6	17	14	0	0	0	0	0	0	0	0	2	2	0	1	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	6	0	3	4	11	0	5	0	0	0	0	0	0	0	1	0	0	3	5	4	0	2	5	3	4	1	1	0	4	3	0	0	48	3	10	0	0	0	0	0	0	0	0	0	0	0	1	0	2	1	5	0	2	0	0	0	0	0	0
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....................................................................................................................TGTCTTTTTCCGCTTACTGGCGTAA...........................................................................................................................................................................................................................	25	1	212.00	212	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	3	0	2	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	8	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	3	0	3	0	0	1	2	0	4	0	0	0	5	0	0	0	0	0	0	10	3	1	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	3	2	1	0	1	4	6	1	1	3	2	0	0	0	0	0	0	0	0	0	0	0	1	3	0	0	0	0	1	4	0	2	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	5	1	3	1	5	3	6	0	0	0	0	0	12	4	9	13	0	2	1	0	0	0	5	7	1	1	1	1	0	0	0	0	0	3	1	0	0	0	0	0	0	0	0	0	0	0	3	3	1	2	2	3	7	0	0	0	0	0	0
..........................................................................................................................................................ACAGGAAAGGGAAAAAGG............................................................................................................................................................................................	18	1	183.00	183	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	2	15	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	6	2	15	0	0	1	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	1	0	0	0	0	0	0	0	0	1	0	5	4	0	0	8	0	0	0	0	3	0	1	5	0	0	0	3	4	0	0	0	0	0	0	0	0	0	0	0	22	5	16	5	11	13	11	0	0	0	0	0	0
..........................................................................................................................................................ACAGGAAAGGGAAAAAGGCGTATC......................................................................................................................................................................................	24	1	161.00	161	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	74	87	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
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....................................................................................................................TGTCTTTTTCCGCTTACTGGCGTAAA..........................................................................................................................................................................................................................	26	1	28.00	28	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	1	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	3	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	1	0	0	0	0	0	0	0	2	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0
....................................................................................................................TGTCTTTTTCCGCTTACTGC................................................................................................................................................................................................................................	20	1	28.00	28	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	2	4	7	1	3	1	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................ACAGGAAAGGGAAAAAGGCGTAG.......................................................................................................................................................................................	23	1	28.00	28	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	3	0	2	5	3	1	2	5	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
........................................................................................................................................................CGACAGGAAAGGGAAAAAGG............................................................................................................................................................................................	20	1	27.00	27	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	8	0	3	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	0	0	1	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	1	0	0	0	0	0	0	0	0
....................................................................................................................TGTCTTTTTCCGCTTACTGGG...............................................................................................................................................................................................................................	21	1	26.00	26	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	0	0	1	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	3	2	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0
....................................................................................................................TGTCTTTTTCCGCTTACTGGCGTAG...........................................................................................................................................................................................................................	25	1	25.00	25	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	1	3	4	0	0	0	0	3	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	2	1	2	0	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................TGTCTTTTTCCGCTTACTGGCGTTAA..........................................................................................................................................................................................................................	26	1	25.00	25	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	2	1	0	0	0	1	0	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	1	0	2	0	0	0	0	0	0	0	0	0	2	0	0	0	1	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	2	0	0	0	0	0	0
....................................................................................................................TGTCTTTTTCCGCTTACTGCG...............................................................................................................................................................................................................................	21	1	24.00	24	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	1	1	3	0	0	2	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................TTGTCTTTTTCCGCTTACTGG................................................................................................................................................................................................................................	21	1	24.00	24	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	2	2	4	3	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

droSim2

-TCG--GTATGTG--------------------------------------------------------------A-----------AAAGTGGATACAC-AAATTCTAGTCGATTTGTCTTTTTCCGCTTACTGGCGTTTCATTTCCACAACGACAGGAAAGGGAAAAAGGCGTATTTACTATGAGTTTGCCCAGCGACTTGCA--------------------GGTGATCCAGGT----GTGT--AT------------AG-------------------------------------------------------TA------------TTAGTAAGTATTCCATCGT----TTGCT	Size	Hit Count	Total Norm	Total	M023 Head	M024 Male-body	M025 Embryo	M053 Female-body	O001 Testis	O002 Head	SRR553485 Ovary	SRR553486 Ovary	SRR553487 Ovary	SRR553488 Ovary	SRR618934 Ovary	V044 Embryo	SRR902008 Ovary	SRR902009 Testis	SRR1275487 Male larvae	SRR1275485 Male prepupae	SRR1275483 Male prepupae
....................................................................................................................TGTCTTTTTCCGCTTACTGGCG..............................................................................................................................................................................................................................	22	1	10671.00	10671	467	717	1481	3649	16	16	239	211	111	178	1133	2443	2	8	0	0	0
....................................................................................................................TGTCTTTTTCCGCTTACTG.................................................................................................................................................................................................................................	19	1	9867.00	9867	6654	2619	154	29	278	123	1	4	0	0	5	0	0	0	0	0	0
..........................................................................................................................................................ACAGGAAAGGGAAAAAGGCGTA........................................................................................................................................................................................	22	1	9056.00	9056	0	1	10	64	0	1	116	164	158	87	228	21	909	7297	0	0	0
....................................................................................................................TGTCTTTTTCCGCTTACTGGC...............................................................................................................................................................................................................................	21	1	7082.00	7082	2087	1271	346	998	42	23	1310	761	42	30	32	98	2	40	0	0	0
....................................................................................................................TGTCTTTTTCCGCTTACTGG................................................................................................................................................................................................................................	20	1	3750.00	3750	286	276	149	1292	30	13	1096	511	26	14	22	4	3	28	0	0	0
..........................................................................................................................................................ACAGGAAAGGGAAAAAGGCGT.........................................................................................................................................................................................	21	1	1517.00	1517	0	0	0	15	3	0	2	3	12	2	40	0	174	1266	0	0	0
....................................................................................................................TGTCTTTTTCCGCTTACTGGCGT.............................................................................................................................................................................................................................	23	1	1068.00	1068	4	6	16	338	5	5	35	24	21	41	262	299	1	11	0	0	0
....................................................................................................................TGTCTTTTTCCGCTTACTGGCGA.............................................................................................................................................................................................................................	23	1	564.00	564	2	1	0	89	0	0	181	229	32	14	11	0	2	3	0	0	0
.........................................................................................................................................................GACAGGAAAGGGAAAAAGGCGTA........................................................................................................................................................................................	23	1	375.00	375	0	1	0	1	1	0	2	1	4	0	22	3	40	300	0	0	0
....................................................................................................................TGTCTTTTTCCGCTTACT..................................................................................................................................................................................................................................	18	1	331.00	331	4	6	0	3	244	68	0	0	0	1	5	0	0	0	0	0	0
..........................................................................................................................................................ACAGGAAAGGGAAAAAGGCGTAA.......................................................................................................................................................................................	23	1	309.00	309	0	0	1	6	0	0	1	2	2	1	10	1	49	236	0	0	0
.....................................................................................................................GTCTTTTTCCGCTTACTGGCG..............................................................................................................................................................................................................................	21	1	267.00	267	0	0	1	263	0	0	0	0	0	0	2	1	0	0	0	0	0
..........................................................................................................................................................ACAGGAAAGGGAAAAAGGCGTAT.......................................................................................................................................................................................	23	1	255.00	255	0	0	0	2	0	1	0	1	1	0	3	0	23	224	0	0	0
....................................................................................................................TGTCTTTTTCCGCTTACTGGCT..............................................................................................................................................................................................................................	22	1	236.00	236	113	73	12	16	0	0	7	4	0	0	1	8	1	1	0	0	0
....................................................................................................................TGTCTTTTTCCGCTTACTGGA...............................................................................................................................................................................................................................	21	1	113.00	113	14	8	0	19	0	0	45	26	0	0	0	0	0	1	0	0	0
....................................................................................................................TGTCTTTTTCCGCTTACTGGCA..............................................................................................................................................................................................................................	22	1	111.00	111	5	8	2	17	0	0	42	22	4	1	4	3	0	3	0	0	0
..........................................................................................................................................................ACAGGAAAGGGAAAAAGGCGTT........................................................................................................................................................................................	22	1	91.00	91	0	0	0	1	0	0	0	0	0	0	0	0	5	85	0	0	0
..........................................................................................................................................................ACAGGAAAGGGAAAAAGGCG..........................................................................................................................................................................................	20	1	90.00	90	0	1	4	1	6	1	0	1	0	0	10	1	4	61	0	0	0
....................................................................................................................TGTCTTTTTCCGCTTACTGGCGTT............................................................................................................................................................................................................................	24	1	82.00	82	0	0	1	12	0	0	16	9	4	8	9	23	0	0	0	0	0
.....................................................................................................................GTCTTTTTCCGCTTACTGGC...............................................................................................................................................................................................................................	20	1	80.00	80	0	0	0	79	1	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................................................................GACAGGAAAGGGAAAAAGGCGT.........................................................................................................................................................................................	22	1	75.00	75	0	0	0	2	0	0	0	0	0	0	5	0	10	58	0	0	0
.....................................................................................................................GTCTTTTTCCGCTTACTGG................................................................................................................................................................................................................................	19	1	52.00	52	0	0	0	51	0	0	1	0	0	0	0	0	0	0	0	0	0
....................................................................................................................TGTCTTTTTCCGCTTACTGGCGG.............................................................................................................................................................................................................................	23	1	48.00	48	0	0	1	47	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................ACAGGAAAGGGAAAAAGGC...........................................................................................................................................................................................	19	1	33.00	33	0	0	0	0	13	2	0	0	0	0	18	0	0	0	0	0	0
....................................................................................................................TGTCTTTTTCCGCTTACTGGCGAA............................................................................................................................................................................................................................	24	1	29.00	29	0	0	0	6	0	0	6	11	1	3	1	1	0	0	0	0	0
....................................................................................................................TGTCTTTTTCCGCTTACTGGT...............................................................................................................................................................................................................................	21	1	29.00	29	6	5	0	11	0	0	2	4	0	0	0	1	0	0	0	0	0
....................................................................................................................TGTCTTTTTCCGCTTACTGA................................................................................................................................................................................................................................	20	1	28.00	28	16	7	0	3	0	0	1	1	0	0	0	0	0	0	0	0	0
.......................................................................................................................CTTTTTCCGCTTACTGGCG..............................................................................................................................................................................................................................	19	1	28.00	28	0	0	3	9	0	0	0	0	0	0	12	4	0	0	0	0	0
......................................................................................................................TCTTTTTCCGCTTACTGGCG..............................................................................................................................................................................................................................	20	1	28.00	28	1	3	0	22	0	0	0	0	0	0	0	2	0	0	0	0	0
..........................................................................................................................TTTCCGCTTACTGGCG..............................................................................................................................................................................................................................	16	1	27.00	27	0	0	0	0	0	0	0	0	0	0	27	0	0	0	0	0	0
........................................................................................................................TTTTTCCGCTTACTGGCG..............................................................................................................................................................................................................................	18	1	27.00	27	0	0	1	8	0	0	0	0	0	0	18	0	0	0	0	0	0
....................................................................................................................TGTCTTTTTCCGCTTACTGGCTG.............................................................................................................................................................................................................................	23	1	26.00	26	16	9	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................TGTCTTTTTCCGCTTACTGGCGTA............................................................................................................................................................................................................................	24	1	23.00	23	0	0	0	2	0	0	9	8	1	3	0	0	0	0	0	0	0
..........................................................................................................................................................ACAGGAAAGGGAAAAAGG............................................................................................................................................................................................	18	1	22.00	22	0	0	0	0	13	2	0	0	0	0	7	0	0	0	0	0	0
.....................................................................................................................GTCTTTTTCCGCTTACTGGCGT.............................................................................................................................................................................................................................	22	1	22.00	22	0	0	0	21	0	0	0	0	0	0	1	0	0	0	0	0	0
........................................................................................................................................................CGACAGGAAAGGGAAAAAGGCGTA........................................................................................................................................................................................	24	1	21.00	21	0	0	0	0	0	0	1	0	0	0	0	0	5	15	0	0	0
.........................................................................................................................................................GACAGGAAAGGGAAAAAGGCG..........................................................................................................................................................................................	21	1	20.00	20	0	0	0	1	0	0	0	0	0	0	2	0	2	15	0	0	0
...........................................................................................................................................................CAGGAAAGGGAAAAAGGCGTA........................................................................................................................................................................................	21	1	14.00	14	0	0	0	4	0	0	0	0	0	0	0	0	1	9	0	0	0
....................................................................................................................TGTCTTTTTCCGCTTACTGGG...............................................................................................................................................................................................................................	21	1	13.00	13	3	3	0	4	0	0	2	1	0	0	0	0	0	0	0	0	0
....................................................................................................................TGTCTTTTTCCGCTTACTGGCC..............................................................................................................................................................................................................................	22	1	13.00	13	5	3	1	0	0	0	0	0	0	0	2	2	0	0	0	0	0
....................................................................................................................TGTCTTTTTCCGCTTACTGT................................................................................................................................................................................................................................	20	1	12.00	12	6	4	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................................................................GACAGGAAAGGGAAAAAGGCGTAT.......................................................................................................................................................................................	24	1	10.00	10	0	0	0	0	0	0	0	0	0	0	1	0	3	6	0	0	0
......................................................................................................................TCTTTTTCCGCTTACTGGC...............................................................................................................................................................................................................................	19	1	9.00	9	1	0	0	8	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................................TTTTCCGCTTACTGGCG..............................................................................................................................................................................................................................	17	1	9.00	9	0	0	0	0	0	0	0	0	0	0	9	0	0	0	0	0	0
....................................................................................................................TGTCTTTTTCCGCTTACTGGCGC.............................................................................................................................................................................................................................	23	1	9.00	9	0	2	1	2	0	0	0	0	1	0	2	1	0	0	0	0	0
.....................................................................................................................GTCTTTTTCCGCTTACTGGCGA.............................................................................................................................................................................................................................	22	1	9.00	9	0	0	0	9	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................GTCTTTTTCCGCTTACTG.................................................................................................................................................................................................................................	18	1	8.00	8	4	1	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................................TTTTTCCGCTTACTGGCGT.............................................................................................................................................................................................................................	19	1	7.00	7	0	0	0	1	0	0	0	0	0	0	5	1	0	0	0	0	0
...................................................................................................................TTGTCTTTTTCCGCTTACTG.................................................................................................................................................................................................................................	20	1	7.00	7	4	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................TGTCTTTTTCCGCTTA....................................................................................................................................................................................................................................	16	1	7.00	7	0	0	0	0	0	0	0	0	0	0	7	0	0	0	0	0	0
.........................................................................................................................................................GACAGGAAAGGGAAAAAGGCGTT........................................................................................................................................................................................	23	1	7.00	7	0	0	0	0	0	0	1	0	0	0	0	1	2	3	0	0	0
.......................................................................................................................CTTTTTCCGCTTACTGGCGT.............................................................................................................................................................................................................................	20	1	6.00	6	0	0	0	0	0	0	0	0	0	0	6	0	0	0	0	0	0
........................................................................................................................................................CGACAGGAAAGGGAAAAAGGCGT.........................................................................................................................................................................................	23	1	6.00	6	0	0	0	0	0	0	0	0	0	0	0	0	1	5	0	0	0
....................................................................................................................TGTCTTTTTCCGCTTACTA.................................................................................................................................................................................................................................	19	1	6.00	6	4	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................TTGTCTTTTTCCGCTTACTGG................................................................................................................................................................................................................................	21	1	6.00	6	0	1	0	2	0	0	0	3	0	0	0	0	0	0	0	0	0
.........................................................................................................................................................GACAGGAAAGGGAAAAAGGCGTAA.......................................................................................................................................................................................	24	1	5.00	5	0	0	0	0	0	0	0	0	0	0	0	0	1	4	0	0	0
.....................................................................................................................GTCTTTTTCCGCTTACTGGCGG.............................................................................................................................................................................................................................	22	1	5.00	5	0	0	0	5	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................ACAGGAAAGGGAAAAAGGCGTAAA......................................................................................................................................................................................	24	1	5.00	5	0	0	0	1	0	0	0	0	0	0	1	0	2	1	0	0	0
....................................................................................................................TGTCTTTTTCCGCTTACTGGCGTTT...........................................................................................................................................................................................................................	25	1	5.00	5	0	0	0	1	0	0	0	0	0	1	0	1	0	2	0	0	0
..........................................................................................................................................................ACAGGAAAGGGAAAAAGGCGTAC.......................................................................................................................................................................................	23	1	5.00	5	0	0	0	0	0	0	0	0	1	0	0	0	0	4	0	0	0
..........................................................................................................................................................ACAGGAAAGGGAAAAAGGCGTG........................................................................................................................................................................................	22	1	4.00	4	0	0	0	0	0	0	0	0	0	0	0	0	0	4	0	0	0
...................................................................................................................TTGTCTTTTTCCGCTTACTGGC...............................................................................................................................................................................................................................	22	1	4.00	4	0	0	3	1	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................TTCCGCTTACTGGCGT.............................................................................................................................................................................................................................	16	1	4.00	4	0	0	0	0	0	0	0	0	0	0	4	0	0	0	0	0	0
..........................................................................................................................................................ACAGGAAAGGGAAAAAG.............................................................................................................................................................................................	17	1	4.00	4	0	0	0	0	0	0	0	0	0	0	4	0	0	0	0	0	0
..........................................................................................................................................................ACAGGAAAGGGAAAAAGGCGA.........................................................................................................................................................................................	21	1	4.00	4	0	0	0	0	0	0	0	0	0	0	0	0	1	3	0	0	0
..........................................................................................................................................................ACAGGAAAGGGAAAAAGGCGTAG.......................................................................................................................................................................................	23	1	4.00	4	0	0	0	0	0	0	0	0	0	0	0	0	1	3	0	0	0
...................................................................................................................TTGTCTTTTTCCGCTTACTGGCG..............................................................................................................................................................................................................................	23	1	4.00	4	0	0	1	3	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................TGTCTTTTTCCGCTTACTGGAA..............................................................................................................................................................................................................................	22	1	4.00	4	1	0	0	1	0	0	0	0	0	0	0	0	0	2	0	0	0
.....................................................................................................................GTCTTTTTCCGCTTACTGGCT..............................................................................................................................................................................................................................	21	1	4.00	4	0	0	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................................................................GACAGGAAAGGGAAAAAG.............................................................................................................................................................................................	18	1	4.00	4	0	0	0	0	2	1	0	0	0	0	1	0	0	0	0	0	0
....................................................................................................................TGTCTTTTTCCGCTTACTC.................................................................................................................................................................................................................................	19	1	4.00	4	2	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0
..........................................................................................................................................................ACAGGAAAGGGAAAAAGGCGTC........................................................................................................................................................................................	22	1	3.00	3	0	0	0	0	0	0	0	0	0	1	0	0	1	1	0	0	0
..........................................................................................................................................................ACAGGAAAGGGAAAAAGGCGTATA......................................................................................................................................................................................	24	1	3.00	3	0	0	0	0	0	0	0	0	0	0	0	0	2	1	0	0	0
....................................................................................................................TGTCTTTTTCCGCTTACTGGCTGG............................................................................................................................................................................................................................	24	1	3.00	3	1	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0
...........................................................................................................................TTCCGCTTACTGGCG..............................................................................................................................................................................................................................	15	1	3.00	3	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0
..........................................................................................................................TTTCCGCTTACTGGCGT.............................................................................................................................................................................................................................	17	1	3.00	3	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0
..........................................................................................................................................................ACAGGAAAGGGAAAAAGGCA..........................................................................................................................................................................................	20	1	3.00	3	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0
.....................................................................................................................GTCTTTTTCCGCTTACTGGCA..............................................................................................................................................................................................................................	21	1	3.00	3	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................TGTCTTTTTCCGCTTAC...................................................................................................................................................................................................................................	17	1	3.00	3	0	0	0	0	0	0	2	0	0	0	1	0	0	0	0	0	0
....................................................................................................................TGTCTTTTTCCGCTTACTGGCGAAA...........................................................................................................................................................................................................................	25	1	3.00	3	0	0	0	2	0	0	0	0	0	0	0	0	0	1	0	0	0
.........................................................................................................................TTTTCCGCTTACTGGCGT.............................................................................................................................................................................................................................	18	1	3.00	3	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0
..........................................................................................................................................................ACAGGAAAGGGAAAAA..............................................................................................................................................................................................	16	1	3.00	3	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0
....................................................................................................................TGTCTTTTTCCGCTTACTGC................................................................................................................................................................................................................................	20	1	3.00	3	2	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................TGTCTTTTTCCGCTTACTGGAAA.............................................................................................................................................................................................................................	23	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0
....................................................................................................................TGTCTTTTTCCGCTTACC..................................................................................................................................................................................................................................	18	1	2.00	2	0	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
.............................................................................................................................................................GGAAAGGGAAAAAGGCGTA........................................................................................................................................................................................	19	1	2.00	2	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0
....................................................................................................................TGTCTTTTTCCGCTTACTT.................................................................................................................................................................................................................................	19	1	2.00	2	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................................................AGGAAAGGGAAAAAGGCGT.........................................................................................................................................................................................	19	1	2.00	2	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	0	0
....................................................................................................................TGTCTTTTTCCGCTTACTGGCGCCA...........................................................................................................................................................................................................................	25	1	2.00	2	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0
...................................................................................................................TTGTCTTTTTCCGCTTACTGGCGT.............................................................................................................................................................................................................................	24	1	2.00	2	0	0	0	1	0	0	0	0	0	0	1	0	0	0	0	0	0
....................................................................................................................TGTCTTTTTCCGCTTACTGGCGTTTC..........................................................................................................................................................................................................................	26	1	2.00	2	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................ACAGGAAAGGGAAAAAGGCGTATT......................................................................................................................................................................................	24	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0
............................................................................................................................................................AGGAAAGGGAAAAAGGCGTA........................................................................................................................................................................................	20	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0
....................................................................................................................TGTCTTTTTCCGCTTACTGGCGGG............................................................................................................................................................................................................................	24	1	2.00	2	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................ACAGGAAAGGGAAAA...............................................................................................................................................................................................	15	1	2.00	2	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0
......................................................................................................................TCTTTTTCCGCTTACTGG................................................................................................................................................................................................................................	18	1	2.00	2	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................CTTTTTCCGCTTACTGGC...............................................................................................................................................................................................................................	18	1	2.00	2	0	0	0	1	0	0	0	0	0	0	1	0	0	0	0	0	0
........................................................................................................................TTTTTCCGCTTACTGGCGA.............................................................................................................................................................................................................................	19	1	2.00	2	0	0	0	1	0	0	0	0	0	0	1	0	0	0	0	0	0
.........................................................................................................................................................GACAGGAAAGGGAAAAAGG............................................................................................................................................................................................	19	1	2.00	2	0	0	0	0	1	0	0	0	0	0	1	0	0	0	0	0	0
.....................................................................................................................GTCTTTTTCCGCTTACTGGCGTT............................................................................................................................................................................................................................	23	1	2.00	2	0	0	0	1	0	0	0	0	0	0	0	1	0	0	0	0	0

droSec2

-TCG--GTATGTG--------------------------------------------------------------A-----------AAAGTGGATACAC-AAATTCTAGTCGATTTGTCTTTTTCCGCTTACTGGCGTTTCATTTCCACAACGACAGGAAAGGGAAAAAGGCGTATTTACTATGAGTTTGCCCAGCGACTTGCA--------------------GGTGATCCAGGT----GTGT--AT------------AG-------------------------------------------------------TA------------TTAGAAAGTATTTCATCGT--------C	Size	Hit Count	Total Norm	Total	M054 Female-body	V113 Male-body	V114 Embryo	V115 Head
....................................................................................................................TGTCTTTTTCCGCTTACTGGCG..............................................................................................................................................................................................................................	22	1	26782.00	26782	14797	889	9911	1185
....................................................................................................................TGTCTTTTTCCGCTTACTGGCGT.............................................................................................................................................................................................................................	23	1	5570.00	5570	1962	847	2586	175
....................................................................................................................TGTCTTTTTCCGCTTACTGG................................................................................................................................................................................................................................	20	1	5359.00	5359	5008	98	34	219
....................................................................................................................TGTCTTTTTCCGCTTACTGGC...............................................................................................................................................................................................................................	21	1	4633.00	4633	4318	88	77	150
.....................................................................................................................GTCTTTTTCCGCTTACTGGCG..............................................................................................................................................................................................................................	21	1	1195.00	1195	1188	0	6	1
....................................................................................................................TGTCTTTTTCCGCTTACTGGCGA.............................................................................................................................................................................................................................	23	1	1037.00	1037	716	132	30	159
..........................................................................................................................................................ACAGGAAAGGGAAAAAGGCGTA........................................................................................................................................................................................	22	1	348.00	348	51	167	129	1
.....................................................................................................................GTCTTTTTCCGCTTACTGG................................................................................................................................................................................................................................	19	1	319.00	319	318	0	0	1
....................................................................................................................TGTCTTTTTCCGCTTACTGGCGTT............................................................................................................................................................................................................................	24	1	284.00	284	87	67	114	16
.....................................................................................................................GTCTTTTTCCGCTTACTGGC...............................................................................................................................................................................................................................	20	1	278.00	278	278	0	0	0
....................................................................................................................TGTCTTTTTCCGCTTACTGGA...............................................................................................................................................................................................................................	21	1	219.00	219	180	10	0	29
....................................................................................................................TGTCTTTTTCCGCTTACTGGCT..............................................................................................................................................................................................................................	22	1	139.00	139	100	22	2	15
....................................................................................................................TGTCTTTTTCCGCTTACTGGCA..............................................................................................................................................................................................................................	22	1	121.00	121	91	8	7	15
....................................................................................................................TGTCTTTTTCCGCTTACTGGCGG.............................................................................................................................................................................................................................	23	1	114.00	114	114	0	0	0
.....................................................................................................................GTCTTTTTCCGCTTACTGGCGT.............................................................................................................................................................................................................................	22	1	109.00	109	106	0	2	1
....................................................................................................................TGTCTTTTTCCGCTTACTG.................................................................................................................................................................................................................................	19	1	99.00	99	85	1	1	12
....................................................................................................................TGTCTTTTTCCGCTTACTGGT...............................................................................................................................................................................................................................	21	1	92.00	92	68	5	0	19
....................................................................................................................TGTCTTTTTCCGCTTACTGGCGAA............................................................................................................................................................................................................................	24	1	66.00	66	22	23	1	20
......................................................................................................................TCTTTTTCCGCTTACTGGCG..............................................................................................................................................................................................................................	20	1	62.00	62	58	0	4	0
.......................................................................................................................CTTTTTCCGCTTACTGGCG..............................................................................................................................................................................................................................	19	1	53.00	53	48	1	4	0
.....................................................................................................................GTCTTTTTCCGCTTACTGGCGA.............................................................................................................................................................................................................................	22	1	49.00	49	49	0	0	0
....................................................................................................................TGTCTTTTTCCGCTTACTGGCGTA............................................................................................................................................................................................................................	24	1	48.00	48	17	15	4	12
.........................................................................................................................................................GACAGGAAAGGGAAAAAGGCGTA........................................................................................................................................................................................	23	1	45.00	45	5	8	32	0
..........................................................................................................................................................ACAGGAAAGGGAAAAAGGCGT.........................................................................................................................................................................................	21	1	44.00	44	6	32	6	0
....................................................................................................................TGTCTTTTTCCGCTTACTGGCGC.............................................................................................................................................................................................................................	23	1	42.00	42	12	3	23	4
........................................................................................................................TTTTTCCGCTTACTGGCG..............................................................................................................................................................................................................................	18	1	39.00	39	31	0	7	1
....................................................................................................................TGTCTTTTTCCGCTTACTGGCGTTT...........................................................................................................................................................................................................................	25	1	32.00	32	13	8	7	4
....................................................................................................................TGTCTTTTTCCGCTTACT..................................................................................................................................................................................................................................	18	1	23.00	23	23	0	0	0
....................................................................................................................TGTCTTTTTCCGCTTACTGT................................................................................................................................................................................................................................	20	1	21.00	21	16	4	0	1
....................................................................................................................TGTCTTTTTCCGCTTACTGA................................................................................................................................................................................................................................	20	1	20.00	20	19	0	0	1
....................................................................................................................TGTCTTTTTCCGCTTACTGGG...............................................................................................................................................................................................................................	21	1	19.00	19	19	0	0	0
....................................................................................................................TGTCTTTTTCCGCTTACTGGCGTAA...........................................................................................................................................................................................................................	25	1	19.00	19	7	5	1	6
......................................................................................................................TCTTTTTCCGCTTACTGG................................................................................................................................................................................................................................	18	1	18.00	18	18	0	0	0
.....................................................................................................................GTCTTTTTCCGCTTACTGGCT..............................................................................................................................................................................................................................	21	1	18.00	18	18	0	0	0
......................................................................................................................TCTTTTTCCGCTTACTGGC...............................................................................................................................................................................................................................	19	1	18.00	18	18	0	0	0
.....................................................................................................................GTCTTTTTCCGCTTACTGGCGG.............................................................................................................................................................................................................................	22	1	18.00	18	18	0	0	0
....................................................................................................................TGTCTTTTTCCGCTTACTGGCC..............................................................................................................................................................................................................................	22	1	17.00	17	11	0	6	0
..........................................................................................................................................................ACAGGAAAGGGAAAAAGGC...........................................................................................................................................................................................	19	1	17.00	17	1	4	12	0
..........................................................................................................................................................ACAGGAAAGGGAAAAAGGCGTAA.......................................................................................................................................................................................	23	1	17.00	17	5	11	1	0
....................................................................................................................TGTCTTTTTCCGCTTACTGC................................................................................................................................................................................................................................	20	1	15.00	15	13	0	0	2
....................................................................................................................TGTCTTTTTCCGCTTACTGCG...............................................................................................................................................................................................................................	21	1	14.00	14	11	1	2	0
.....................................................................................................................GTCTTTTTCCGCTTACTGGCA..............................................................................................................................................................................................................................	21	1	14.00	14	14	0	0	0
..........................................................................................................................................................ACAGGAAAGGGAAAAAGGCGTAT.......................................................................................................................................................................................	23	1	12.00	12	6	6	0	0
...................................................................................................................TTGTCTTTTTCCGCTTACTGGCG..............................................................................................................................................................................................................................	23	1	12.00	12	12	0	0	0
..........................................................................................................................................................ACAGGAAAGGGAAAAAGGCG..........................................................................................................................................................................................	20	1	11.00	11	4	5	0	2
....................................................................................................................TGTCTTTTTCCGCTTACTGGAA..............................................................................................................................................................................................................................	22	1	10.00	10	7	1	0	2
.......................................................................................................................CTTTTTCCGCTTACTGGC...............................................................................................................................................................................................................................	18	1	9.00	9	9	0	0	0
.....................................................................................................................GTCTTTTTCCGCTTACTG.................................................................................................................................................................................................................................	18	1	9.00	9	9	0	0	0
.......................................................................................................................CTTTTTCCGCTTACTGGCGT.............................................................................................................................................................................................................................	20	1	9.00	9	6	0	3	0
...................................................................................................................TTGTCTTTTTCCGCTTACTGGC...............................................................................................................................................................................................................................	22	1	9.00	9	9	0	0	0
....................................................................................................................TGTCTTTTTCCGCTTACTGGCGTTA...........................................................................................................................................................................................................................	25	1	8.00	8	3	4	0	1
.....................................................................................................................GTCTTTTTCCGCTTACTGGA...............................................................................................................................................................................................................................	20	1	8.00	8	8	0	0	0
...................................................................................................................TTGTCTTTTTCCGCTTACTGG................................................................................................................................................................................................................................	21	1	6.00	6	5	1	0	0
....................................................................................................................TGTCTTTTTCCGCTTACTGGTT..............................................................................................................................................................................................................................	22	1	6.00	6	6	0	0	0
......................................................................................................................TCTTTTTCCGCTTACTGGCGT.............................................................................................................................................................................................................................	21	1	6.00	6	4	0	2	0
.....................................................................................................................GTCTTTTTCCGCTTACTGC................................................................................................................................................................................................................................	19	1	5.00	5	5	0	0	0
....................................................................................................................TGTCTTTTTCCGCTTACTGGCGAAA...........................................................................................................................................................................................................................	25	1	5.00	5	2	1	0	2
........................................................................................................................TTTTTCCGCTTACTGGCGT.............................................................................................................................................................................................................................	19	1	5.00	5	4	0	1	0
.........................................................................................................................................................GACAGGAAAGGGAAAAAGGCG..........................................................................................................................................................................................	21	1	5.00	5	3	2	0	0
...........................................................................................................................................................CAGGAAAGGGAAAAAGGCGTA........................................................................................................................................................................................	21	1	5.00	5	5	0	0	0
.....................................................................................................................GTCTTTTTCCGCTTACTGGT...............................................................................................................................................................................................................................	20	1	4.00	4	4	0	0	0
....................................................................................................................TGTCTTTTTCCGCTTACTGGCGTC............................................................................................................................................................................................................................	24	1	4.00	4	0	0	3	1
.....................................................................................................................GTCTTTTTCCGCTTACTGGCGTT............................................................................................................................................................................................................................	23	1	4.00	4	3	0	1	0
....................................................................................................................TGTCTTTTTCCGCTTACTGGCAA.............................................................................................................................................................................................................................	23	1	4.00	4	2	0	0	2
....................................................................................................................TGTCTTTTTCCGCTTACTGGCGTG............................................................................................................................................................................................................................	24	1	3.00	3	3	0	0	0
....................................................................................................................TGTCTTTTTCCGCTTACTGGTA..............................................................................................................................................................................................................................	22	1	3.00	3	2	0	0	1
........................................................................................................................................................CGACAGGAAAGGGAAAAAGGCGTA........................................................................................................................................................................................	24	1	3.00	3	1	1	1	0
...................................................................................................................TTGTCTTTTTCCGCTTACTGGCGT.............................................................................................................................................................................................................................	24	1	3.00	3	3	0	0	0
.........................................................................................................................TTTTCCGCTTACTGGCGT.............................................................................................................................................................................................................................	18	1	3.00	3	2	1	0	0
....................................................................................................................TGTCTTTTTCCGCTTACTGGCGTAAA..........................................................................................................................................................................................................................	26	1	3.00	3	0	1	1	1
......................................................................................................................TCTTTTTCCGCTTACTGGCGA.............................................................................................................................................................................................................................	21	1	3.00	3	3	0	0	0
.....................................................................................................................GTCTTTTTCCGCTTACTGT................................................................................................................................................................................................................................	19	1	2.00	2	2	0	0	0
....................................................................................................................TGTCTTTTTCCGCTTACTGGAT..............................................................................................................................................................................................................................	22	1	2.00	2	2	0	0	0
....................................................................................................................TGTCTTTTTCCGCTTACTT.................................................................................................................................................................................................................................	19	1	2.00	2	2	0	0	0
....................................................................................................................TGTCTTTTTCCGCTTACTGGAAA.............................................................................................................................................................................................................................	23	1	2.00	2	1	1	0	0
..........................................................................................................................................................ACAGGAAAGGGAAAAAGGCGTAC.......................................................................................................................................................................................	23	1	2.00	2	0	2	0	0
.........................................................................................................................................................GACAGGAAAGGGAAAAAGG............................................................................................................................................................................................	19	1	2.00	2	0	0	2	0
.........................................................................................................................................................GACAGGAAAGGGAAAAAGGC...........................................................................................................................................................................................	20	1	2.00	2	1	1	0	0
...........................................................................................................................................................CAGGAAAGGGAAAAAGGC...........................................................................................................................................................................................	18	1	2.00	2	1	0	1	0
....................................................................................................................TGTCTTTTTCCGCTTACTGGCCA.............................................................................................................................................................................................................................	23	1	2.00	2	0	1	0	1

droYak3

-TCG--GTATGTG--------------------------------------------------------------A-----------AAAGTGGATACAC-AAATTCTAGTCGATTTGTCTTTTTCCGCTTACTGGCGTTTCATTTCAACAACGACAGGAAAGGGAAAAAGGCGTATTTACTATGAGTTTGACCAGCGATTTGCA--------------------GGTGATCAAGGT----GCAT----------------AG----------------------------------------------TATGGGTAGTA------------G--------------TGGTA---TACCC	Size	Hit Count	Total Norm	Total	M026 Head	M043 Female-body	M056 Embryo	V046 Embryo	V052 Head	V058 Head	V120 Male-body	SRR1275488 Male larvae	SRR1275486 Male prepupae	SRR1275484 Male prepupae	GSM1528802 follicle cells
....................................................................................................................TGTCTTTTTCCGCTTACTGGCG..............................................................................................................................................................................................................................	22	2	18340.50	36681	205	27247	5656	2412	387	525	248	0	0	1	0
....................................................................................................................TGTCTTTTTCCGCTTACTGG................................................................................................................................................................................................................................	20	2	3690.50	7381	50	6046	1222	5	6	17	35	0	0	0	0
....................................................................................................................TGTCTTTTTCCGCTTACTGGC...............................................................................................................................................................................................................................	21	2	3387.50	6775	433	4505	1687	106	9	15	20	0	0	0	0
....................................................................................................................TGTCTTTTTCCGCTTACTGGCGT.............................................................................................................................................................................................................................	23	2	2060.50	4121	0	1886	1589	288	47	62	224	0	0	0	25
..........................................................................................................................................................ACAGGAAAGGGAAAAAGGCGTA........................................................................................................................................................................................	22	2	1247.50	2495	0	326	2082	24	0	7	54	0	0	2	0
.....................................................................................................................GTCTTTTTCCGCTTACTGGCG..............................................................................................................................................................................................................................	21	2	1220.50	2441	0	2425	16	0	0	0	0	0	0	0	0
....................................................................................................................TGTCTTTTTCCGCTTACTG.................................................................................................................................................................................................................................	19	2	726.50	1453	1185	255	4	1	3	4	1	0	0	0	0
.....................................................................................................................GTCTTTTTCCGCTTACTGG................................................................................................................................................................................................................................	19	2	227.00	454	0	451	3	0	0	0	0	0	0	0	0
....................................................................................................................TGTCTTTTTCCGCTTACTGGCGC.............................................................................................................................................................................................................................	23	2	193.00	386	0	11	372	2	0	0	1	0	0	0	0
.....................................................................................................................GTCTTTTTCCGCTTACTGGC...............................................................................................................................................................................................................................	20	2	181.00	362	0	362	0	0	0	0	0	0	0	0	0
.........................................................................................................................................................GACAGGAAAGGGAAAAAGGCGTA........................................................................................................................................................................................	23	2	130.00	260	0	20	232	6	0	0	1	0	0	1	0
..........................................................................................................................................................ACAGGAAAGGGAAAAAGGCGT.........................................................................................................................................................................................	21	2	106.50	213	0	62	144	0	0	0	7	0	0	0	0
.......................................................................................................................CTTTTTCCGCTTACTGGCG..............................................................................................................................................................................................................................	19	2	102.00	204	0	180	23	1	0	0	0	0	0	0	0
........................................................................................................................TTTTTCCGCTTACTGGCG..............................................................................................................................................................................................................................	18	2	94.50	189	0	144	43	2	0	0	0	0	0	0	0
....................................................................................................................TGTCTTTTTCCGCTTACTGGCT..............................................................................................................................................................................................................................	22	2	86.00	172	16	132	5	2	7	7	3	0	0	0	0
....................................................................................................................TGTCTTTTTCCGCTTACTGGCGTT............................................................................................................................................................................................................................	24	2	83.00	166	0	55	79	11	2	2	13	0	0	0	4
.....................................................................................................................GTCTTTTTCCGCTTACTGGCGT.............................................................................................................................................................................................................................	22	2	66.50	133	0	126	5	2	0	0	0	0	0	0	0
....................................................................................................................TGTCTTTTTCCGCTTACTGGCA..............................................................................................................................................................................................................................	22	2	61.00	122	1	109	6	2	0	2	2	0	0	0	0
....................................................................................................................TGTCTTTTTCCGCTTACTGGCGA.............................................................................................................................................................................................................................	23	2	55.50	111	1	92	1	4	3	7	3	0	0	0	0
......................................................................................................................TCTTTTTCCGCTTACTGGCG..............................................................................................................................................................................................................................	20	2	55.00	110	0	103	6	1	0	0	0	0	0	0	0
....................................................................................................................TGTCTTTTTCCGCTTACTGGCC..............................................................................................................................................................................................................................	22	2	54.50	109	2	10	94	0	0	2	1	0	0	0	0
....................................................................................................................TGTCTTTTTCCGCTTACT..................................................................................................................................................................................................................................	18	2	37.00	74	2	71	1	0	0	0	0	0	0	0	0
....................................................................................................................TGTCTTTTTCCGCTTACTGGT...............................................................................................................................................................................................................................	21	2	34.00	68	0	57	9	0	1	1	0	0	0	0	0
....................................................................................................................TGTCTTTTTCCGCTTACTGGCGG.............................................................................................................................................................................................................................	23	2	27.50	55	0	51	4	0	0	0	0	0	0	0	0
....................................................................................................................TGTCTTTTTCCGCTTACTGGG...............................................................................................................................................................................................................................	21	2	22.50	45	0	2	42	1	0	0	0	0	0	0	0
..........................................................................................................................................................ACAGGAAAGGGAAAAAGGCG..........................................................................................................................................................................................	20	2	18.50	37	0	9	26	0	0	1	1	0	0	0	0
...........................................................................................................................................................CAGGAAAGGGAAAAAGGCGTA........................................................................................................................................................................................	21	2	18.00	36	0	27	9	0	0	0	0	0	0	0	0
....................................................................................................................TGTCTTTTTCCGCTTACTGGA...............................................................................................................................................................................................................................	21	2	17.50	35	0	33	1	1	0	0	0	0	0	0	0
...................................................................................................................TTGTCTTTTTCCGCTTACTGGCG..............................................................................................................................................................................................................................	23	2	16.50	33	0	31	1	1	0	0	0	0	0	0	0
.......................................................................................................................CTTTTTCCGCTTACTGGC...............................................................................................................................................................................................................................	18	2	15.50	31	0	25	6	0	0	0	0	0	0	0	0
..........................................................................................................................................................ACAGGAAAGGGAAAAAGGCGTAA.......................................................................................................................................................................................	23	2	13.00	26	0	15	6	1	0	0	4	0	0	0	0
.........................................................................................................................................................GACAGGAAAGGGAAAAAGGCGT.........................................................................................................................................................................................	22	2	13.00	26	0	5	21	0	0	0	0	0	0	0	0
....................................................................................................................TGTCTTTTTCCGCTTACTGGCGTC............................................................................................................................................................................................................................	24	2	12.50	25	0	4	20	0	0	0	0	0	0	0	1
.....................................................................................................................GTCTTTTTCCGCTTACTG.................................................................................................................................................................................................................................	18	2	12.00	24	1	23	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................ACAGGAAAGGGAAAAAGGC...........................................................................................................................................................................................	19	2	12.00	24	0	3	8	0	0	0	13	0	0	0	0
....................................................................................................................TGTCTTTTTCCGCTTACTGC................................................................................................................................................................................................................................	20	2	11.00	22	0	1	21	0	0	0	0	0	0	0	0
......................................................................................................................TCTTTTTCCGCTTACTGGC...............................................................................................................................................................................................................................	19	2	10.50	21	0	18	3	0	0	0	0	0	0	0	0
.......................................................................................................................CTTTTTCCGCTTACTGGCGT.............................................................................................................................................................................................................................	20	2	9.00	18	0	13	5	0	0	0	0	0	0	0	0
..........................................................................................................................................................ACAGGAAAGGGAAAAAGGCGC.........................................................................................................................................................................................	21	2	8.50	17	0	0	17	0	0	0	0	0	0	0	0
....................................................................................................................TGTCTTTTTCCGCTTACTGGCGTA............................................................................................................................................................................................................................	24	2	8.00	16	0	11	0	0	1	2	2	0	0	0	0
........................................................................................................................TTTTTCCGCTTACTGGCGT.............................................................................................................................................................................................................................	19	2	7.50	15	0	5	10	0	0	0	0	0	0	0	0
....................................................................................................................TGTCTTTTTCCGCTTACTGGCGTTT...........................................................................................................................................................................................................................	25	2	7.50	15	0	11	2	0	0	0	2	0	0	0	0
......................................................................................................................TCTTTTTCCGCTTACTGG................................................................................................................................................................................................................................	18	2	7.50	15	0	15	0	0	0	0	0	0	0	0	0
...................................................................................................................TTGTCTTTTTCCGCTTACTGGC...............................................................................................................................................................................................................................	22	2	7.50	15	0	6	7	2	0	0	0	0	0	0	0
....................................................................................................................TGTCTTTTTCCGCTTACTGGCGTAA...........................................................................................................................................................................................................................	25	2	7.00	14	0	10	0	1	1	1	1	0	0	0	0
...................................................................................................................TTGTCTTTTTCCGCTTACTGG................................................................................................................................................................................................................................	21	2	7.00	14	0	13	1	0	0	0	0	0	0	0	0
..........................................................................................................................................................ACAGGAAAGGGAAAAAGGCGTAT.......................................................................................................................................................................................	23	2	7.00	14	0	9	3	0	0	0	2	0	0	0	0
..........................................................................................................................................................ACAGGAAAGGGAAAAAGGCGTT........................................................................................................................................................................................	22	2	6.50	13	0	4	8	0	0	0	1	0	0	0	0
.........................................................................................................................TTTTCCGCTTACTGGCGT.............................................................................................................................................................................................................................	18	2	6.00	12	0	6	6	0	0	0	0	0	0	0	0
....................................................................................................................TGTCTTTTTCCGCTTACTGT................................................................................................................................................................................................................................	20	2	4.50	9	1	6	1	0	1	0	0	0	0	0	0
.........................................................................................................................................................GACAGGAAAGGGAAAAAGGCG..........................................................................................................................................................................................	21	2	4.00	8	0	3	5	0	0	0	0	0	0	0	0
...........................................................................................................................................................CAGGAAAGGGAAAAAGGCGT.........................................................................................................................................................................................	20	2	4.00	8	0	4	4	0	0	0	0	0	0	0	0
......................................................................................................................TCTTTTTCCGCTTACTGGCGT.............................................................................................................................................................................................................................	21	2	4.00	8	0	8	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................ACAGGAAAGGGAAAAAGGCGTC........................................................................................................................................................................................	22	2	3.50	7	0	0	7	0	0	0	0	0	0	0	0
.....................................................................................................................GTCTTTTTCCGCTTACTGGCGA.............................................................................................................................................................................................................................	22	2	3.50	7	0	6	0	1	0	0	0	0	0	0	0
.....................................................................................................................GTCTTTTTCCGCTTACTGGCT..............................................................................................................................................................................................................................	21	2	3.50	7	1	6	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................ACAGGAAAGGGAAAAAGGCGTAC.......................................................................................................................................................................................	23	2	3.50	7	0	2	5	0	0	0	0	0	0	0	0
............................................................................................................................................................AGGAAAGGGAAAAAGGCGTA........................................................................................................................................................................................	20	2	2.50	5	0	3	2	0	0	0	0	0	0	0	0
........................................................................................................................................................CGACAGGAAAGGGAAAAAGGCGTA........................................................................................................................................................................................	24	2	2.50	5	0	0	5	0	0	0	0	0	0	0	0
.....................................................................................................................GTCTTTTTCCGCTTACTGGCGG.............................................................................................................................................................................................................................	22	2	2.50	5	0	5	0	0	0	0	0	0	0	0	0
.....................................................................................................................GTCTTTTTCCGCTTACTGGCA..............................................................................................................................................................................................................................	21	2	2.50	5	0	5	0	0	0	0	0	0	0	0	0
.....................................................................................................................GTCTTTTTCCGCTTACTGGCGTT............................................................................................................................................................................................................................	23	2	2.00	4	0	4	0	0	0	0	0	0	0	0	0
....................................................................................................................TGTCTTTTTCCGCTTACTGGCGTTA...........................................................................................................................................................................................................................	25	2	2.00	4	0	2	1	1	0	0	0	0	0	0	0
....................................................................................................................TGTCTTTTTCCGCTTACTGGTT..............................................................................................................................................................................................................................	22	2	2.00	4	0	4	0	0	0	0	0	0	0	0	0
....................................................................................................................TGTCTTTTTCCGCTTACTGGCGTG............................................................................................................................................................................................................................	24	2	2.00	4	0	3	1	0	0	0	0	0	0	0	0
.....................................................................................................................GTCTTTTTCCGCTTACTGGCGC.............................................................................................................................................................................................................................	22	2	2.00	4	0	2	2	0	0	0	0	0	0	0	0
........................................................................................................................TTTTTCCGCTTACTGGCGC.............................................................................................................................................................................................................................	19	2	2.00	4	0	1	3	0	0	0	0	0	0	0	0
..........................................................................................................................................................ACAGGAAAGGGAAAAAGG............................................................................................................................................................................................	18	2	2.00	4	0	1	2	0	0	0	1	0	0	0	0
...................................................................................................................TTGTCTTTTTCCGCTTACTGGCGT.............................................................................................................................................................................................................................	24	2	1.50	3	0	3	0	0	0	0	0	0	0	0	0
.........................................................................................................................................................GACAGGAAAGGGAAAAAGGCGTAA.......................................................................................................................................................................................	24	2	1.50	3	0	0	2	1	0	0	0	0	0	0	0
.........................................................................................................................................................GACAGGAAAGGGAAAAAGG............................................................................................................................................................................................	19	2	1.50	3	0	0	1	0	0	0	2	0	0	0	0
.........................................................................................................................................................GACAGGAAAGGGAAAAAGGCGTT........................................................................................................................................................................................	23	2	1.50	3	0	0	3	0	0	0	0	0	0	0	0

droEre2

-TCG--GTATGTG--------------------------------------------------------------AAA-TACAC---AAAGTGGATACAC-AAATTCTAGTCGATTTGTCTTTTTCCGCTTACTGGCGTTTCATTTCAACAACGACAGGAAAGGGAAAAAGGCGTATTCACTATGAGTTTGGCCAGCGACTTGCA--------------------GGTGATCAAGGT----GTAT--GT------------AG-------------------------------------------------------TATACCCTCTTGTTTGGGTATGTATTT---CATCTG-TATCA	Size	Hit Count	Total Norm	Total	M055 Female-body	M057 Embryo	V060 Head	V040 Embryo	V107 Male-body	V108 Head	GSM1528801 follicle cells
....................................................................................................................TGTCTTTTTCCGCTTACTGGCG..............................................................................................................................................................................................................................	22	1	59102.00	59102	51898	1152	888	1456	1017	2639	52
....................................................................................................................TGTCTTTTTCCGCTTACTGG................................................................................................................................................................................................................................	20	1	9316.00	9316	8767	186	21	4	78	259	1
....................................................................................................................TGTCTTTTTCCGCTTACTGGC...............................................................................................................................................................................................................................	21	1	6963.00	6963	6368	349	23	59	43	121	0
....................................................................................................................TGTCTTTTTCCGCTTACTGGCGT.............................................................................................................................................................................................................................	23	1	5179.00	5179	3393	267	144	230	837	205	103
.....................................................................................................................GTCTTTTTCCGCTTACTGGCG..............................................................................................................................................................................................................................	21	1	4052.00	4052	4048	1	0	1	0	2	0
.....................................................................................................................GTCTTTTTCCGCTTACTGG................................................................................................................................................................................................................................	19	1	546.00	546	545	1	0	0	0	0	0
..........................................................................................................................................................ACAGGAAAGGGAAAAAGGCGTA........................................................................................................................................................................................	22	1	521.00	521	72	129	0	12	277	10	21
.....................................................................................................................GTCTTTTTCCGCTTACTGGC...............................................................................................................................................................................................................................	20	1	473.00	473	473	0	0	0	0	0	0
....................................................................................................................TGTCTTTTTCCGCTTACTGGCGG.............................................................................................................................................................................................................................	23	1	437.00	437	435	1	0	1	0	0	0
....................................................................................................................TGTCTTTTTCCGCTTACTGGCGA.............................................................................................................................................................................................................................	23	1	310.00	310	184	1	12	1	10	28	74
....................................................................................................................TGTCTTTTTCCGCTTACTGGCT..............................................................................................................................................................................................................................	22	1	207.00	207	142	0	15	29	9	12	0
.....................................................................................................................GTCTTTTTCCGCTTACTGGCGT.............................................................................................................................................................................................................................	22	1	206.00	206	204	1	0	0	1	0	0
......................................................................................................................TCTTTTTCCGCTTACTGGCG..............................................................................................................................................................................................................................	20	1	192.00	192	188	3	1	0	0	0	0
....................................................................................................................TGTCTTTTTCCGCTTACTGGCGTT............................................................................................................................................................................................................................	24	1	182.00	182	99	14	7	7	41	9	5
....................................................................................................................TGTCTTTTTCCGCTTACTG.................................................................................................................................................................................................................................	19	1	160.00	160	145	2	0	1	2	10	0
....................................................................................................................TGTCTTTTTCCGCTTACTGGCA..............................................................................................................................................................................................................................	22	1	147.00	147	136	2	0	0	1	8	0
.......................................................................................................................CTTTTTCCGCTTACTGGCG..............................................................................................................................................................................................................................	19	1	127.00	127	122	4	0	1	0	0	0
....................................................................................................................TGTCTTTTTCCGCTTACTGGCGC.............................................................................................................................................................................................................................	23	1	80.00	80	20	52	0	2	3	3	0
........................................................................................................................TTTTTCCGCTTACTGGCG..............................................................................................................................................................................................................................	18	1	75.00	75	65	4	0	1	1	4	0
....................................................................................................................TGTCTTTTTCCGCTTACTGGT...............................................................................................................................................................................................................................	21	1	69.00	69	60	1	1	0	3	4	0
....................................................................................................................TGTCTTTTTCCGCTTACTGGA...............................................................................................................................................................................................................................	21	1	65.00	65	57	0	1	0	3	4	0
...................................................................................................................TTGTCTTTTTCCGCTTACTGGCG..............................................................................................................................................................................................................................	23	1	55.00	55	55	0	0	0	0	0	0
.....................................................................................................................GTCTTTTTCCGCTTACTGGCT..............................................................................................................................................................................................................................	21	1	54.00	54	54	0	0	0	0	0	0
.....................................................................................................................GTCTTTTTCCGCTTACTGGCGG.............................................................................................................................................................................................................................	22	1	54.00	54	54	0	0	0	0	0	0
....................................................................................................................TGTCTTTTTCCGCTTACTGGG...............................................................................................................................................................................................................................	21	1	52.00	52	45	7	0	0	0	0	0
..........................................................................................................................................................ACAGGAAAGGGAAAAAGGCGT.........................................................................................................................................................................................	21	1	46.00	46	6	14	0	0	26	0	0
....................................................................................................................TGTCTTTTTCCGCTTACTGGCC..............................................................................................................................................................................................................................	22	1	44.00	44	20	15	1	6	1	1	0
....................................................................................................................TGTCTTTTTCCGCTTACTGGCGTA............................................................................................................................................................................................................................	24	1	44.00	44	23	0	0	0	16	5	0
....................................................................................................................TGTCTTTTTCCGCTTACTGCG...............................................................................................................................................................................................................................	21	1	44.00	44	44	0	0	0	0	0	0
....................................................................................................................TGTCTTTTTCCGCTTACT..................................................................................................................................................................................................................................	18	1	35.00	35	33	0	0	0	0	2	0
..........................................................................................................................................................ACAGGAAAGGGAAAAAGG............................................................................................................................................................................................	18	1	34.00	34	2	0	0	0	29	3	0
....................................................................................................................TGTCTTTTTCCGCTTACTGT................................................................................................................................................................................................................................	20	1	29.00	29	26	0	0	0	0	3	0
.........................................................................................................................................................GACAGGAAAGGGAAAAAGGCGTA........................................................................................................................................................................................	23	1	25.00	25	0	13	0	1	11	0	0
..........................................................................................................................................................ACAGGAAAGGGAAAAAGGCG..........................................................................................................................................................................................	20	1	24.00	24	6	1	0	0	17	0	0
......................................................................................................................TCTTTTTCCGCTTACTGG................................................................................................................................................................................................................................	18	1	24.00	24	24	0	0	0	0	0	0
......................................................................................................................TCTTTTTCCGCTTACTGGC...............................................................................................................................................................................................................................	19	1	22.00	22	22	0	0	0	0	0	0
....................................................................................................................TGTCTTTTTCCGCTTACTGC................................................................................................................................................................................................................................	20	1	20.00	20	16	3	1	0	0	0	0
....................................................................................................................TGTCTTTTTCCGCTTACTGGCGGG............................................................................................................................................................................................................................	24	1	17.00	17	17	0	0	0	0	0	0
....................................................................................................................TGTCTTTTTCCGCTTACTGGCGTTT...........................................................................................................................................................................................................................	25	1	17.00	17	11	0	0	0	6	0	0
..........................................................................................................................................................ACAGGAAAGGGAAAAAGGCGTT........................................................................................................................................................................................	22	1	15.00	15	2	0	0	0	0	0	13
....................................................................................................................TGTCTTTTTCCGCTTACTGGCGTAA...........................................................................................................................................................................................................................	25	1	15.00	15	9	0	0	0	3	3	0
..........................................................................................................................................................ACAGGAAAGGGAAAAAGGC...........................................................................................................................................................................................	19	1	15.00	15	2	1	0	0	10	2	0
.....................................................................................................................GTCTTTTTCCGCTTACTG.................................................................................................................................................................................................................................	18	1	14.00	14	14	0	0	0	0	0	0
..........................................................................................................................................................ACAGGAAAGGGAAAAAGGT...........................................................................................................................................................................................	19	1	13.00	13	1	0	0	0	12	0	0
....................................................................................................................TGTCTTTTTCCGCTTACTGGCGAA............................................................................................................................................................................................................................	24	1	13.00	13	6	0	0	0	3	3	1
....................................................................................................................TGTCTTTTTCCGCTTACTGGCGTC............................................................................................................................................................................................................................	24	1	12.00	12	4	1	0	0	2	0	5
.....................................................................................................................GTCTTTTTCCGCTTACTGGCGA.............................................................................................................................................................................................................................	22	1	12.00	12	12	0	0	0	0	0	0
......................................................................................................................TCTTTTTCCGCTTACTGGCGT.............................................................................................................................................................................................................................	21	1	12.00	12	12	0	0	0	0	0	0
..........................................................................................................................................................ACAGGAAAGGGAAAAAGGCGTAA.......................................................................................................................................................................................	23	1	12.00	12	4	0	0	0	8	0	0
.......................................................................................................................CTTTTTCCGCTTACTGGC...............................................................................................................................................................................................................................	18	1	11.00	11	8	2	0	1	0	0	0
.......................................................................................................................CTTTTTCCGCTTACTGGCGT.............................................................................................................................................................................................................................	20	1	11.00	11	8	2	1	0	0	0	0
...................................................................................................................TTGTCTTTTTCCGCTTACTGG................................................................................................................................................................................................................................	21	1	9.00	9	9	0	0	0	0	0	0
........................................................................................................................TTTTTCCGCTTACTGGCGT.............................................................................................................................................................................................................................	19	1	8.00	8	5	3	0	0	0	0	0
....................................................................................................................TGTCTTTTTCCGCTTACTGA................................................................................................................................................................................................................................	20	1	8.00	8	8	0	0	0	0	0	0
.........................................................................................................................................................GACAGGAAAGGGAAAAAGGCGT.........................................................................................................................................................................................	22	1	6.00	6	0	4	0	0	2	0	0
.....................................................................................................................GTCTTTTTCCGCTTACTGGA...............................................................................................................................................................................................................................	20	1	5.00	5	5	0	0	0	0	0	0
...........................................................................................................................................................CAGGAAAGGGAAAAAGGCGTA........................................................................................................................................................................................	21	1	5.00	5	4	0	0	0	1	0	0
.....................................................................................................................GTCTTTTTCCGCTTACTGCG...............................................................................................................................................................................................................................	20	1	5.00	5	5	0	0	0	0	0	0
.....................................................................................................................GTCTTTTTCCGCTTACTGGT...............................................................................................................................................................................................................................	20	1	5.00	5	5	0	0	0	0	0	0
.........................................................................................................................TTTTCCGCTTACTGGCGT.............................................................................................................................................................................................................................	18	1	5.00	5	3	1	0	0	1	0	0
.....................................................................................................................GTCTTTTTCCGCTTACTGGCA..............................................................................................................................................................................................................................	21	1	5.00	5	5	0	0	0	0	0	0
.....................................................................................................................GTCTTTTTCCGCTTACTGGCGTT............................................................................................................................................................................................................................	23	1	4.00	4	4	0	0	0	0	0	0
...................................................................................................................TTGTCTTTTTCCGCTTACTGGC...............................................................................................................................................................................................................................	22	1	4.00	4	4	0	0	0	0	0	0
.....................................................................................................................GTCTTTTTCCGCTTACTGT................................................................................................................................................................................................................................	19	1	4.00	4	4	0	0	0	0	0	0
..........................................................................................................................................................ACAGGAAAGGGAAAAAGGCGTAC.......................................................................................................................................................................................	23	1	3.00	3	0	0	0	0	3	0	0
..........................................................................................................................................................ACAGGAAAGGGAAAAAGGCGTAT.......................................................................................................................................................................................	23	1	3.00	3	1	0	0	0	2	0	0
.........................................................................................................................................................GACAGGAAAGGGAAAAAGG............................................................................................................................................................................................	19	1	3.00	3	0	0	0	0	3	0	0

dp5

-AAA--GTCCG-------------------------------AGGTTTTCGCAGCTAAATATATTGTA-------AAA-TATAC---AA-----AGATCA-AAATTCTAGTCGATTTGTCTTTTTCCGCTTACTGGCGTTTTATTCGATCAACGACAGGAAAGGGAAAAAGGCGTATTTACTATGAGTTTATCCAACAAA---CAACCGACCCAATTCAGC--------------------------TT------------AA----------------------TAATAGGTGAGTACATCCC-----------------------------------------CATCATA---TATAT	Size	Hit Count	Total Norm	Total	M022 Male-body	M040 Female-body	M059 Embryo	M062 Head	V043 Embryo	V051 Head	V112 Male-body	SRR902010 Ovary	SRR902011 Testis	SRR902012 CNS imaginal disc
....................................................................................................................TGTCTTTTTCCGCTTACTGGCG..............................................................................................................................................................................................................................	22	1	58028.00	58028	39	50148	1637	236	3220	1428	654	282	376	8
....................................................................................................................TGTCTTTTTCCGCTTACTGGC...............................................................................................................................................................................................................................	21	1	13516.00	13516	36	12027	619	500	137	61	47	7	76	6
....................................................................................................................TGTCTTTTTCCGCTTACTGG................................................................................................................................................................................................................................	20	1	12269.00	12269	4	11706	287	143	19	32	47	6	25	0
....................................................................................................................TGTCTTTTTCCGCTTACTGGCGT.............................................................................................................................................................................................................................	23	1	8815.00	8815	0	6679	641	57	496	258	641	5	37	1
.....................................................................................................................GTCTTTTTCCGCTTACTGGCG..............................................................................................................................................................................................................................	21	1	4277.00	4277	0	4270	2	1	3	0	0	0	1	0
..........................................................................................................................................................ACAGGAAAGGGAAAAAGGCGTA........................................................................................................................................................................................	22	1	2920.00	2920	0	1246	660	10	38	2	121	301	479	63
.....................................................................................................................GTCTTTTTCCGCTTACTGGC...............................................................................................................................................................................................................................	20	1	941.00	941	0	938	1	2	0	0	0	0	0	0
.....................................................................................................................GTCTTTTTCCGCTTACTGG................................................................................................................................................................................................................................	19	1	898.00	898	0	898	0	0	0	0	0	0	0	0
....................................................................................................................TGTCTTTTTCCGCTTACTGGCGTT............................................................................................................................................................................................................................	24	1	531.00	531	0	408	36	5	26	22	34	0	0	0
..........................................................................................................................................................ACAGGAAAGGGAAAAAGGCGT.........................................................................................................................................................................................	21	1	423.00	423	0	231	45	0	0	1	19	45	73	9
.....................................................................................................................GTCTTTTTCCGCTTACTGGCGT.............................................................................................................................................................................................................................	22	1	386.00	386	0	384	1	0	0	0	1	0	0	0
.......................................................................................................................CTTTTTCCGCTTACTGGCG..............................................................................................................................................................................................................................	19	1	340.00	340	0	328	5	4	3	0	0	0	0	0
....................................................................................................................TGTCTTTTTCCGCTTACTG.................................................................................................................................................................................................................................	19	1	276.00	276	37	232	3	1	1	1	0	0	1	0
........................................................................................................................TTTTTCCGCTTACTGGCG..............................................................................................................................................................................................................................	18	1	222.00	222	0	208	1	3	6	0	0	4	0	0
......................................................................................................................TCTTTTTCCGCTTACTGGCG..............................................................................................................................................................................................................................	20	1	219.00	219	0	215	3	1	0	0	0	0	0	0
....................................................................................................................TGTCTTTTTCCGCTTACTGGCGA.............................................................................................................................................................................................................................	23	1	210.00	210	0	193	0	0	2	5	7	1	2	0
....................................................................................................................TGTCTTTTTCCGCTTACTGGCA..............................................................................................................................................................................................................................	22	1	198.00	198	0	177	6	0	6	4	4	0	1	0
....................................................................................................................TGTCTTTTTCCGCTTACTGGCT..............................................................................................................................................................................................................................	22	1	195.00	195	1	174	1	0	7	3	8	0	1	0
....................................................................................................................TGTCTTTTTCCGCTTACTGGCGC.............................................................................................................................................................................................................................	23	1	190.00	190	0	15	149	17	3	3	3	0	0	0
.........................................................................................................................................................GACAGGAAAGGGAAAAAGGCGTA........................................................................................................................................................................................	23	1	180.00	180	0	60	92	1	5	0	6	5	11	0
....................................................................................................................TGTCTTTTTCCGCTTACTGGT...............................................................................................................................................................................................................................	21	1	179.00	179	0	169	2	1	0	2	5	0	0	0
...........................................................................................................................................................CAGGAAAGGGAAAAAGGCGTA........................................................................................................................................................................................	21	1	134.00	134	0	118	10	0	0	0	2	1	3	0
....................................................................................................................TGTCTTTTTCCGCTTACTGGCGTTT...........................................................................................................................................................................................................................	25	1	118.00	118	0	100	1	0	1	3	11	2	0	0
....................................................................................................................TGTCTTTTTCCGCTTACTGGCGG.............................................................................................................................................................................................................................	23	1	89.00	89	0	87	1	0	1	0	0	0	0	0
...................................................................................................................TTGTCTTTTTCCGCTTACTGGCG..............................................................................................................................................................................................................................	23	1	72.00	72	0	72	0	0	0	0	0	0	0	0
..........................................................................................................................................................ACAGGAAAGGGAAAAAGGCG..........................................................................................................................................................................................	20	1	65.00	65	0	48	3	0	2	0	5	6	1	0
....................................................................................................................TGTCTTTTTCCGCTTACTGGA...............................................................................................................................................................................................................................	21	1	64.00	64	0	63	0	1	0	0	0	0	0	0
.......................................................................................................................CTTTTTCCGCTTACTGGC...............................................................................................................................................................................................................................	18	1	62.00	62	0	59	1	2	0	0	0	0	0	0
....................................................................................................................TGTCTTTTTCCGCTTACTGGCC..............................................................................................................................................................................................................................	22	1	62.00	62	0	8	42	4	1	2	5	0	0	0
......................................................................................................................TCTTTTTCCGCTTACTGGC...............................................................................................................................................................................................................................	19	1	57.00	57	0	55	1	1	0	0	0	0	0	0
....................................................................................................................TGTCTTTTTCCGCTTACT..................................................................................................................................................................................................................................	18	1	52.00	52	0	51	0	0	0	0	0	0	1	0
......................................................................................................................TCTTTTTCCGCTTACTGG................................................................................................................................................................................................................................	18	1	41.00	41	0	41	0	0	0	0	0	0	0	0
..........................................................................................................................................................ACAGGAAAGGGAAAAAGGCGTAA.......................................................................................................................................................................................	23	1	41.00	41	0	28	1	0	0	1	3	0	8	0
.......................................................................................................................CTTTTTCCGCTTACTGGCGT.............................................................................................................................................................................................................................	20	1	39.00	39	0	34	3	1	0	0	1	0	0	0
..........................................................................................................................................................ACAGGAAAGGGAAAAAGGC...........................................................................................................................................................................................	19	1	37.00	37	0	16	12	2	3	1	0	3	0	0
....................................................................................................................TGTCTTTTTCCGCTTACTGGCGTA............................................................................................................................................................................................................................	24	1	34.00	34	0	25	0	0	1	0	6	0	2	0
........................................................................................................................TTTTTCCGCTTACTGGCGT.............................................................................................................................................................................................................................	19	1	28.00	28	0	23	1	3	0	0	1	0	0	0
....................................................................................................................TGTCTTTTTCCGCTTACTGT................................................................................................................................................................................................................................	20	1	25.00	25	1	22	0	0	1	0	1	0	0	0
.....................................................................................................................GTCTTTTTCCGCTTACTGGCGTT............................................................................................................................................................................................................................	23	1	23.00	23	0	22	0	0	1	0	0	0	0	0
.........................................................................................................................................................GACAGGAAAGGGAAAAAGGCGT.........................................................................................................................................................................................	22	1	22.00	22	0	17	3	0	0	0	0	1	0	1
......................................................................................................................TCTTTTTCCGCTTACTGGCGT.............................................................................................................................................................................................................................	21	1	21.00	21	0	21	0	0	0	0	0	0	0	0
..........................................................................................................................................................ACAGGAAAGGGAAAAAGGCGTT........................................................................................................................................................................................	22	1	21.00	21	0	16	1	0	1	0	1	0	2	0
....................................................................................................................TGTCTTTTTCCGCTTACTGGG...............................................................................................................................................................................................................................	21	1	20.00	20	0	2	13	5	0	0	0	0	0	0
.........................................................................................................................TTTTCCGCTTACTGGCGT.............................................................................................................................................................................................................................	18	1	20.00	20	0	20	0	0	0	0	0	0	0	0
.....................................................................................................................GTCTTTTTCCGCTTACTGGCGG.............................................................................................................................................................................................................................	22	1	20.00	20	0	20	0	0	0	0	0	0	0	0
...........................................................................................................................................................CAGGAAAGGGAAAAAGGCGT.........................................................................................................................................................................................	20	1	18.00	18	0	15	0	0	0	0	0	3	0	0
............................................................................................................................................................AGGAAAGGGAAAAAGGCGTA........................................................................................................................................................................................	20	1	18.00	18	0	17	0	0	0	0	1	0	0	0
.....................................................................................................................GTCTTTTTCCGCTTACTG.................................................................................................................................................................................................................................	18	1	15.00	15	0	15	0	0	0	0	0	0	0	0
.....................................................................................................................GTCTTTTTCCGCTTACTGGCGA.............................................................................................................................................................................................................................	22	1	15.00	15	0	15	0	0	0	0	0	0	0	0
...................................................................................................................TTGTCTTTTTCCGCTTACTGGC...............................................................................................................................................................................................................................	22	1	14.00	14	0	14	0	0	0	0	0	0	0	0
..........................................................................................................................................................ACAGGAAAGGGAAAAAGGCGTAT.......................................................................................................................................................................................	23	1	14.00	14	0	10	0	0	0	0	0	0	3	1
.........................................................................................................................................................GACAGGAAAGGGAAAAAGGC...........................................................................................................................................................................................	20	1	11.00	11	0	6	2	0	0	0	3	0	0	0
...................................................................................................................TTGTCTTTTTCCGCTTACTGG................................................................................................................................................................................................................................	21	1	11.00	11	0	10	0	1	0	0	0	0	0	0
.....................................................................................................................GTCTTTTTCCGCTTACTGGT...............................................................................................................................................................................................................................	20	1	10.00	10	0	10	0	0	0	0	0	0	0	0
.........................................................................................................................................................GACAGGAAAGGGAAAAAGGCG..........................................................................................................................................................................................	21	1	9.00	9	0	8	1	0	0	0	0	0	0	0
....................................................................................................................TGTCTTTTTCCGCTTACTGGCGTC............................................................................................................................................................................................................................	24	1	9.00	9	0	2	7	0	0	0	0	0	0	0
.....................................................................................................................GTCTTTTTCCGCTTACTGGCA..............................................................................................................................................................................................................................	21	1	9.00	9	0	9	0	0	0	0	0	0	0	0
...................................................................................................................TTGTCTTTTTCCGCTTACTGGCGT.............................................................................................................................................................................................................................	24	1	8.00	8	0	8	0	0	0	0	0	0	0	0
....................................................................................................................TGTCTTTTTCCGCTTACTGA................................................................................................................................................................................................................................	20	1	8.00	8	0	5	2	1	0	0	0	0	0	0
.....................................................................................................................GTCTTTTTCCGCTTACTGGA...............................................................................................................................................................................................................................	20	1	7.00	7	0	7	0	0	0	0	0	0	0	0
..........................................................................................................................................................ACAGGAAAGGGAAAAAGGCGC.........................................................................................................................................................................................	21	1	7.00	7	0	0	7	0	0	0	0	0	0	0
.....................................................................................................................GTCTTTTTCCGCTTACTGGCT..............................................................................................................................................................................................................................	21	1	7.00	7	0	7	0	0	0	0	0	0	0	0
.....................................................................................................................GTCTTTTTCCGCTTACTGGCGTTT...........................................................................................................................................................................................................................	24	1	7.00	7	0	7	0	0	0	0	0	0	0	0
....................................................................................................................TGTCTTTTTCCGCTTACTGGCGTAA...........................................................................................................................................................................................................................	25	1	7.00	7	0	6	0	0	0	1	0	0	0	0
....................................................................................................................TGTCTTTTTCCGCTTACTGGCGTTA...........................................................................................................................................................................................................................	25	1	7.00	7	0	7	0	0	0	0	0	0	0	0
.........................................................................................................................................................GACAGGAAAGGGAAAAAGG............................................................................................................................................................................................	19	1	6.00	6	0	5	0	0	0	0	1	0	0	0
..........................................................................................................................................................ACAGGAAAGGGAAAAAGG............................................................................................................................................................................................	18	1	6.00	6	0	3	0	0	1	0	2	0	0	0
..........................................................................................................................................................ACAGGAAAGGGAAAAAGGCGTAC.......................................................................................................................................................................................	23	1	6.00	6	0	5	1	0	0	0	0	0	0	0
....................................................................................................................TGTCTTTTTCCGCTTACTGGCGAA............................................................................................................................................................................................................................	24	1	6.00	6	0	6	0	0	0	0	0	0	0	0
....................................................................................................................TGTCTTTTTCCGCTTACTGC................................................................................................................................................................................................................................	20	1	5.00	5	0	0	4	1	0	0	0	0	0	0
.......................................................................................................................CTTTTTCCGCTTACTGGCGTT............................................................................................................................................................................................................................	21	1	5.00	5	0	4	1	0	0	0	0	0	0	0
....................................................................................................................TGTCTTTTTCCGCTTACTGGCGTTTT..........................................................................................................................................................................................................................	26	1	5.00	5	0	4	0	0	0	0	1	0	0	0
....................................................................................................................TGTCTTTTTCCGCTTACTGCG...............................................................................................................................................................................................................................	21	1	4.00	4	0	2	0	0	1	0	1	0	0	0
........................................................................................................................................................CGACAGGAAAGGGAAAAAGGCGT.........................................................................................................................................................................................	23	1	4.00	4	0	1	2	0	0	0	0	0	1	0
....................................................................................................................TGTCTTTTTCCGCTTACTGGCGTTG...........................................................................................................................................................................................................................	25	1	4.00	4	0	4	0	0	0	0	0	0	0	0
..........................................................................................................................................................ACAGGAAAGGGAAAAAGGCGTC........................................................................................................................................................................................	22	1	4.00	4	0	0	2	0	0	0	2	0	0	0
........................................................................................................................................................CGACAGGAAAGGGAAAAAGGCGTA........................................................................................................................................................................................	24	1	4.00	4	0	2	1	0	1	0	0	0	0	0
....................................................................................................................TGTCTTTTTCCGCTTACTGGTT..............................................................................................................................................................................................................................	22	2	3.50	7	0	7	0	0	0	0	0	0	0	0
....................................................................................................................TGTCTTTTTCCGCTTACTGGAA..............................................................................................................................................................................................................................	22	1	3.00	3	0	3	0	0	0	0	0	0	0	0
....................................................................................................................TGTCTTTTTCCGCTTACTGGTA..............................................................................................................................................................................................................................	22	1	3.00	3	0	3	0	0	0	0	0	0	0	0
.......................................................................................................................CTTTTTCCGCTTACTGGCA..............................................................................................................................................................................................................................	19	1	3.00	3	0	3	0	0	0	0	0	0	0	0
...........................................................................................................................................................CAGGAAAGGGAAAAAGGC...........................................................................................................................................................................................	18	1	3.00	3	0	3	0	0	0	0	0	0	0	0
......................................................................................................................TCTTTTTCCGCTTACTGGCGTT............................................................................................................................................................................................................................	22	1	3.00	3	0	2	1	0	0	0	0	0	0	0
.........................................................................................................................................................GACAGGAAAGGGAAAAAGGCGTAA.......................................................................................................................................................................................	24	1	3.00	3	0	3	0	0	0	0	0	0	0	0

droPer2

-AAA--GTCCG-------------------------------AGGTTTTCGCAGCTAAATATATTGTA-------AAA-TATAC---AA-----AGATCA-AAATTCTAGTCGATTTGTCTTTTTCCGCTTACTGGCGTTTTATTCGATCAACGACAGGAAAGGGAAAAAGGCGTATTTACTATGAGTTTATCCAACAAA---CAACCGACCCAATTCAGC--------------------------TT------------AA----------------------TAATAGGTGAGTACATCCC-----------------------------------------CATCATATC-TATCT	Size	Hit Count	Total Norm	Total	M021 Embryo	M042 Female-body	V042 Embryo	V050 Head	V057 Head	V111 Male-body
....................................................................................................................TGTCTTTTTCCGCTTACTGGCG..............................................................................................................................................................................................................................	22	1	12477.00	12477	306	10160	883	507	518	103
....................................................................................................................TGTCTTTTTCCGCTTACTGGC...............................................................................................................................................................................................................................	21	1	1953.00	1953	149	1664	84	28	22	6
....................................................................................................................TGTCTTTTTCCGCTTACTGGCGT.............................................................................................................................................................................................................................	23	1	1886.00	1886	3	1296	135	164	164	124
....................................................................................................................TGTCTTTTTCCGCTTACTGG................................................................................................................................................................................................................................	20	1	1433.00	1433	21	1356	11	21	15	9
.....................................................................................................................GTCTTTTTCCGCTTACTGGCG..............................................................................................................................................................................................................................	21	1	814.00	814	0	814	0	0	0	0
....................................................................................................................TGTCTTTTTCCGCTTACTG.................................................................................................................................................................................................................................	19	1	206.00	206	185	15	3	1	1	1
..........................................................................................................................................................ACAGGAAAGGGAAAAAGGCGTA........................................................................................................................................................................................	22	1	146.00	146	4	32	6	1	13	90
.....................................................................................................................GTCTTTTTCCGCTTACTGGC...............................................................................................................................................................................................................................	20	1	131.00	131	0	131	0	0	0	0
....................................................................................................................TGTCTTTTTCCGCTTACTGGCGTT............................................................................................................................................................................................................................	24	1	101.00	101	0	58	9	14	13	7
.....................................................................................................................GTCTTTTTCCGCTTACTGG................................................................................................................................................................................................................................	19	1	85.00	85	0	85	0	0	0	0
....................................................................................................................TGTCTTTTTCCGCTTACTGGCGA.............................................................................................................................................................................................................................	23	1	79.00	79	0	59	1	11	7	1
.....................................................................................................................GTCTTTTTCCGCTTACTGGCGT.............................................................................................................................................................................................................................	22	1	68.00	68	0	67	0	1	0	0
.......................................................................................................................CTTTTTCCGCTTACTGGCG..............................................................................................................................................................................................................................	19	1	48.00	48	0	48	0	0	0	0
....................................................................................................................TGTCTTTTTCCGCTTACTGGCT..............................................................................................................................................................................................................................	22	1	46.00	46	5	33	1	5	2	0
......................................................................................................................TCTTTTTCCGCTTACTGGCG..............................................................................................................................................................................................................................	20	1	37.00	37	0	37	0	0	0	0
....................................................................................................................TGTCTTTTTCCGCTTACTGGCA..............................................................................................................................................................................................................................	22	1	33.00	33	0	30	0	1	2	0
........................................................................................................................TTTTTCCGCTTACTGGCG..............................................................................................................................................................................................................................	18	1	31.00	31	2	27	0	0	1	1
....................................................................................................................TGTCTTTTTCCGCTTACTGGCGTTT...........................................................................................................................................................................................................................	25	1	27.00	27	0	16	2	0	7	2
....................................................................................................................TGTCTTTTTCCGCTTACTGGCGG.............................................................................................................................................................................................................................	23	1	20.00	20	0	18	0	0	1	1
....................................................................................................................TGTCTTTTTCCGCTTACT..................................................................................................................................................................................................................................	18	1	20.00	20	1	19	0	0	0	0
.........................................................................................................................................................GACAGGAAAGGGAAAAAGGCGTA........................................................................................................................................................................................	23	1	19.00	19	0	2	3	0	1	13
.........................................................................................................................................................GACAGGAAAGGGAAAAAGGC...........................................................................................................................................................................................	20	1	18.00	18	0	1	1	0	0	16
....................................................................................................................TGTCTTTTTCCGCTTACTGGT...............................................................................................................................................................................................................................	21	1	18.00	18	0	14	0	1	3	0
....................................................................................................................TGTCTTTTTCCGCTTACTGGCGC.............................................................................................................................................................................................................................	23	1	13.00	13	1	8	0	1	3	0
..........................................................................................................................................................ACAGGAAAGGGAAAAAGGCGT.........................................................................................................................................................................................	21	1	11.00	11	1	0	0	0	0	10
...................................................................................................................TTGTCTTTTTCCGCTTACTGGCG..............................................................................................................................................................................................................................	23	1	11.00	11	0	11	0	0	0	0
......................................................................................................................TCTTTTTCCGCTTACTGGC...............................................................................................................................................................................................................................	19	1	10.00	10	0	10	0	0	0	0
.....................................................................................................................GTCTTTTTCCGCTTACTGGCGA.............................................................................................................................................................................................................................	22	1	9.00	9	0	9	0	0	0	0
....................................................................................................................TGTCTTTTTCCGCTTACTGGCC..............................................................................................................................................................................................................................	22	1	8.00	8	0	4	1	0	3	0
......................................................................................................................TCTTTTTCCGCTTACTGGCGT.............................................................................................................................................................................................................................	21	1	8.00	8	0	8	0	0	0	0
..........................................................................................................................................................ACAGGAAAGGGAAAAAGGC...........................................................................................................................................................................................	19	1	8.00	8	0	1	0	0	0	7
....................................................................................................................TGTCTTTTTCCGCTTACTGGCGTA............................................................................................................................................................................................................................	24	1	7.00	7	0	2	0	1	4	0
....................................................................................................................TGTCTTTTTCCGCTTACTGGA...............................................................................................................................................................................................................................	21	1	7.00	7	0	7	0	0	0	0
..........................................................................................................................................................ACAGGAAAGGGAAAAAGGCGTAA.......................................................................................................................................................................................	23	1	6.00	6	0	0	0	0	1	5
..........................................................................................................................................................ACAGGAAAGGGAAAAAGGCG..........................................................................................................................................................................................	20	1	6.00	6	0	2	0	0	0	4
....................................................................................................................TGTCTTTTTCCGCTTACTGCG...............................................................................................................................................................................................................................	21	1	6.00	6	0	6	0	0	0	0
......................................................................................................................TCTTTTTCCGCTTACTGG................................................................................................................................................................................................................................	18	1	5.00	5	0	5	0	0	0	0
.........................................................................................................................................................GACAGGAAAGGGAAAAAGG............................................................................................................................................................................................	19	1	5.00	5	0	0	0	0	0	5
...........................................................................................................................................................CAGGAAAGGGAAAAAGGCGTA........................................................................................................................................................................................	21	1	5.00	5	0	4	1	0	0	0
.........................................................................................................................................................GACAGGAAAGGGAAAAAGGCG..........................................................................................................................................................................................	21	1	4.00	4	0	0	0	0	0	4
.........................................................................................................................................................GACAGGAAAGGGAAAAAGGCGT.........................................................................................................................................................................................	22	1	4.00	4	0	2	0	0	0	2
.........................................................................................................................................................GACAGGAAAGGGAAAAAGGCGTAA.......................................................................................................................................................................................	24	1	3.00	3	0	0	0	0	0	3
.....................................................................................................................GTCTTTTTCCGCTTACTG.................................................................................................................................................................................................................................	18	1	3.00	3	1	2	0	0	0	0
....................................................................................................................TGTCTTTTTCCGCTTACTGGCGTTA...........................................................................................................................................................................................................................	25	1	3.00	3	0	2	0	0	1	0
.......................................................................................................................CTTTTTCCGCTTACTGGC...............................................................................................................................................................................................................................	18	1	3.00	3	0	3	0	0	0	0
....................................................................................................................TGTCTTTTTCCGCTTACTGGCGTAA...........................................................................................................................................................................................................................	25	1	3.00	3	0	1	0	0	2	0
....................................................................................................................TGTCTTTTTCCGCTTACTGT................................................................................................................................................................................................................................	20	1	3.00	3	0	2	0	0	1	0
....................................................................................................................TGTCTTTTTCCGCTTACTGGCGAA............................................................................................................................................................................................................................	24	1	2.00	2	0	1	0	0	1	0
....................................................................................................................TGTCTTTTTCCGCTTACTGGCGTTTT..........................................................................................................................................................................................................................	26	1	2.00	2	0	1	0	0	1	0
....................................................................................................................TGTCTTTTTCCGCTTACTGGG...............................................................................................................................................................................................................................	21	1	2.00	2	0	2	0	0	0	0
.............................................................................................................................................................GGAAAGGGAAAAAGGCGTA........................................................................................................................................................................................	19	1	2.00	2	0	0	0	0	0	2
....................................................................................................................TGTCTTTTTCCGCTTACTGC................................................................................................................................................................................................................................	20	1	2.00	2	0	2	0	0	0	0
...................................................................................................................TTGTCTTTTTCCGCTTACTGG................................................................................................................................................................................................................................	21	1	2.00	2	0	2	0	0	0	0
.....................................................................................................................GTCTTTTTCCGCTTACTGGCGG.............................................................................................................................................................................................................................	22	1	2.00	2	0	2	0	0	0	0
......................................................................................................................TCTTTTTCCGCTTACTGGCGTT............................................................................................................................................................................................................................	22	1	2.00	2	0	1	0	1	0	0
........................................................................................................................TTTTTCCGCTTACTGGCGT.............................................................................................................................................................................................................................	19	1	2.00	2	0	2	0	0	0	0
.....................................................................................................................GTCTTTTTCCGCTTACTGGCGTT............................................................................................................................................................................................................................	23	1	2.00	2	0	2	0	0	0	0
.....................................................................................................................GTCTTTTTCCGCTTACTGGT...............................................................................................................................................................................................................................	20	1	2.00	2	0	2	0	0	0	0
....................................................................................................................TGTCTTTTTCCGCTTACTGGAA..............................................................................................................................................................................................................................	22	1	1.00	1	0	1	0	0	0	0
....................................................................................................................TGTCTTTTTCCGCTTACTGGCAC.............................................................................................................................................................................................................................	23	1	1.00	1	0	1	0	0	0	0
.....................................................................................................................GTCTTTTTCCGCTTACTGGCA..............................................................................................................................................................................................................................	21	1	1.00	1	0	1	0	0	0	0
...................................................................................................................TTGTCTTTTTCCGCTTACTGGC...............................................................................................................................................................................................................................	22	1	1.00	1	0	1	0	0	0	0
....................................................................................................................TGTCTTTTTCCGCTTACTGGTT..............................................................................................................................................................................................................................	22	2	1.00	2	0	2	0	0	0	0
.........................................................................................................................................................GACAGGAAAGGGAAAAAGGT...........................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	0	1
..........................................................................................................................TTTCCGCTTACTGGCGTT............................................................................................................................................................................................................................	18	1	1.00	1	0	0	1	0	0	0
..........................................................................................................................................................ACAGGAAAGGGAAAAAGGCGTAC.......................................................................................................................................................................................	23	1	1.00	1	0	0	0	0	0	1
....................................................................................................................TGTCTTTTTCCGCTTACTGGCGTGA...........................................................................................................................................................................................................................	25	1	1.00	1	0	1	0	0	0	0
....................................................................................................................TGTCTTTTTCCGCTTACTGGCGGC............................................................................................................................................................................................................................	24	1	1.00	1	0	1	0	0	0	0

droWil2

-AAT--GTATG--------------------------------------------------------------------------------------TAT-AAATTCTAGTCGATTTGTCTTTTTCCGCTTACTGGCGTTTTATTTAACTAACGACAGGAAAGGGAAAAAGGCGTATTTACTATGAGTTTAATCAACAAATTCT---CCACA---------------------AAAT----CTCTACAAC--------------------------------------TAAGTAAGTATAAACCTATAT-----------------------------AG-------TTATA---TTTAT	Size	Hit Count	Total Norm	Total	M020 Head	M045 Female-body	V117 Male-body	V118 Embryo	V119 Head
....................................................................................................................TGTCTTTTTCCGCTTACTGGCG..............................................................................................................................................................................................................................	22	1	38678.00	38678	416	23418	494	13307	1043
....................................................................................................................TGTCTTTTTCCGCTTACTGGC...............................................................................................................................................................................................................................	21	1	3731.00	3731	593	2898	28	150	62
....................................................................................................................TGTCTTTTTCCGCTTACTGG................................................................................................................................................................................................................................	20	1	3545.00	3545	96	3261	16	80	92
....................................................................................................................TGTCTTTTTCCGCTTACTGGCGT.............................................................................................................................................................................................................................	23	1	3108.00	3108	3	991	487	1544	83
.....................................................................................................................GTCTTTTTCCGCTTACTGGCG..............................................................................................................................................................................................................................	21	1	1959.00	1959	0	1949	0	8	2
....................................................................................................................TGTCTTTTTCCGCTTACTG.................................................................................................................................................................................................................................	19	1	1138.00	1138	1063	70	0	3	2
..........................................................................................................................................................ACAGGAAAGGGAAAAAGGCGTA........................................................................................................................................................................................	22	1	537.00	537	1	228	62	241	5
....................................................................................................................TGTCTTTTTCCGCTTACTGGCGTT............................................................................................................................................................................................................................	24	1	261.00	261	0	70	27	148	16
.......................................................................................................................CTTTTTCCGCTTACTGGCG..............................................................................................................................................................................................................................	19	1	237.00	237	0	236	0	1	0
.....................................................................................................................GTCTTTTTCCGCTTACTGG................................................................................................................................................................................................................................	19	1	228.00	228	0	228	0	0	0
.....................................................................................................................GTCTTTTTCCGCTTACTGGC...............................................................................................................................................................................................................................	20	1	224.00	224	0	224	0	0	0
........................................................................................................................TTTTTCCGCTTACTGGCG..............................................................................................................................................................................................................................	18	1	160.00	160	0	153	0	7	0
....................................................................................................................TGTCTTTTTCCGCTTACTGGCGA.............................................................................................................................................................................................................................	23	1	92.00	92	2	56	4	10	20
......................................................................................................................TCTTTTTCCGCTTACTGGCG..............................................................................................................................................................................................................................	20	1	88.00	88	0	85	0	3	0
....................................................................................................................TGTCTTTTTCCGCTTACTGGCT..............................................................................................................................................................................................................................	22	1	79.00	79	11	39	3	21	5
.....................................................................................................................GTCTTTTTCCGCTTACTGGCGT.............................................................................................................................................................................................................................	22	1	67.00	67	0	66	0	1	0
..........................................................................................................................................................ACAGGAAAGGGAAAAAGGCGT.........................................................................................................................................................................................	21	1	66.00	66	0	44	5	17	0
....................................................................................................................TGTCTTTTTCCGCTTACTGGCGG.............................................................................................................................................................................................................................	23	1	64.00	64	0	64	0	0	0
....................................................................................................................TGTCTTTTTCCGCTTACTGGCA..............................................................................................................................................................................................................................	22	1	59.00	59	1	46	0	9	3
.......................................................................................................................CTTTTTCCGCTTACTGGC...............................................................................................................................................................................................................................	18	1	42.00	42	0	42	0	0	0
.........................................................................................................................................................GACAGGAAAGGGAAAAAGGCGTA........................................................................................................................................................................................	23	1	36.00	36	0	6	2	27	1
...................................................................................................................TTGTCTTTTTCCGCTTACTGGCG..............................................................................................................................................................................................................................	23	1	33.00	33	0	32	0	1	0
....................................................................................................................TGTCTTTTTCCGCTTACTGGA...............................................................................................................................................................................................................................	21	1	25.00	25	0	22	0	0	3
..........................................................................................................................................................ACAGGAAAGGGAAAAAGGCG..........................................................................................................................................................................................	20	1	23.00	23	0	17	4	2	0
....................................................................................................................TGTCTTTTTCCGCTTACTGGCC..............................................................................................................................................................................................................................	22	1	19.00	19	0	3	0	13	3
......................................................................................................................TCTTTTTCCGCTTACTGGC...............................................................................................................................................................................................................................	19	1	17.00	17	1	16	0	0	0
....................................................................................................................TGTCTTTTTCCGCTTACTGGT...............................................................................................................................................................................................................................	21	1	17.00	17	0	12	1	1	3
......................................................................................................................TCTTTTTCCGCTTACTGG................................................................................................................................................................................................................................	18	1	15.00	15	0	15	0	0	0
..........................................................................................................................................................ACAGGAAAGGGAAAAAGGCGTAA.......................................................................................................................................................................................	23	1	15.00	15	0	11	1	2	1
....................................................................................................................TGTCTTTTTCCGCTTACTGCG...............................................................................................................................................................................................................................	21	1	14.00	14	0	6	0	8	0
....................................................................................................................TGTCTTTTTCCGCTTACTGGCGC.............................................................................................................................................................................................................................	23	1	12.00	12	0	5	0	5	2
...........................................................................................................................................................CAGGAAAGGGAAAAAGGCGTA........................................................................................................................................................................................	21	1	12.00	12	0	12	0	0	0
....................................................................................................................TGTCTTTTTCCGCTTACTGGCGTA............................................................................................................................................................................................................................	24	1	11.00	11	0	6	2	2	1
........................................................................................................................................................CGACAGGAAAGGGAAAAAGGCGTA........................................................................................................................................................................................	24	1	11.00	11	0	3	1	7	0
....................................................................................................................TGTCTTTTTCCGCTTACTGGCGTTT...........................................................................................................................................................................................................................	25	1	10.00	10	0	4	3	2	1
....................................................................................................................TGTCTTTTTCCGCTTACT..................................................................................................................................................................................................................................	18	1	10.00	10	0	10	0	0	0
..........................................................................................................................................................ACAGGAAAGGGAAAAAGGC...........................................................................................................................................................................................	19	1	9.00	9	0	1	6	1	1
.....................................................................................................................GTCTTTTTCCGCTTACTG.................................................................................................................................................................................................................................	18	1	8.00	8	0	8	0	0	0
...................................................................................................................TTGTCTTTTTCCGCTTACTGG................................................................................................................................................................................................................................	21	1	7.00	7	0	7	0	0	0
....................................................................................................................TGTCTTTTTCCGCTTACTGT................................................................................................................................................................................................................................	20	1	6.00	6	1	4	0	0	1
........................................................................................................................TTTTTCCGCTTACTGGCGT.............................................................................................................................................................................................................................	19	1	6.00	6	0	4	1	1	0
.......................................................................................................................CTTTTTCCGCTTACTGGCGT.............................................................................................................................................................................................................................	20	1	6.00	6	0	6	0	0	0
......................................................................................................................TCTTTTTCCGCTTACTGGCGT.............................................................................................................................................................................................................................	21	1	5.00	5	0	4	0	1	0
..........................................................................................................................................................ACAGGAAAGGGAAAAAGGCGTAT.......................................................................................................................................................................................	23	1	5.00	5	0	5	0	0	0
..........................................................................................................................................................ACAGGAAAGGGAAAAAGG............................................................................................................................................................................................	18	1	5.00	5	0	1	2	2	0
.....................................................................................................................GTCTTTTTCCGCTTACTGGCGG.............................................................................................................................................................................................................................	22	1	5.00	5	0	5	0	0	0
....................................................................................................................TGTCTTTTTCCGCTTACTGC................................................................................................................................................................................................................................	20	1	4.00	4	0	4	0	0	0
.........................................................................................................................................................GACAGGAAAGGGAAAAAGGCGT.........................................................................................................................................................................................	22	1	4.00	4	0	3	1	0	0
....................................................................................................................TGTCTTTTTCCGCTTACTGGCGTAA...........................................................................................................................................................................................................................	25	1	4.00	4	0	1	0	0	3
...................................................................................................................TTGTCTTTTTCCGCTTACTGGC...............................................................................................................................................................................................................................	22	1	4.00	4	0	4	0	0	0
........................................................................................................................................................CGACAGGAAAGGGAAAAAGGCGT.........................................................................................................................................................................................	23	1	3.00	3	0	2	0	1	0
.....................................................................................................................GTCTTTTTCCGCTTACTGGCGA.............................................................................................................................................................................................................................	22	1	3.00	3	0	3	0	0	0
.....................................................................................................................GTCTTTTTCCGCTTACTGGA...............................................................................................................................................................................................................................	20	1	3.00	3	0	3	0	0	0
.........................................................................................................................................................GACAGGAAAGGGAAAAAGGCG..........................................................................................................................................................................................	21	1	3.00	3	0	0	2	1	0
..................................................................................................................TTTGTCTTTTTCCGCTTACTGGCG..............................................................................................................................................................................................................................	24	1	3.00	3	0	3	0	0	0
.....................................................................................................................GTCTTTTTCCGCTTACTGGCGTT............................................................................................................................................................................................................................	23	1	3.00	3	0	2	0	1	0
.....................................................................................................................GTCTTTTTCCGCTTACTGGCA..............................................................................................................................................................................................................................	21	1	3.00	3	0	3	0	0	0
....................................................................................................................TGTCTTTTTCCGCTTACTGGCGTTA...........................................................................................................................................................................................................................	25	1	3.00	3	0	2	0	0	1
....................................................................................................................TGTCTTTTTCCGCTTACTGGAA..............................................................................................................................................................................................................................	22	1	3.00	3	0	2	0	0	1
.......................................................................................................................CTTTTTCCGCTTACTGGCA..............................................................................................................................................................................................................................	19	1	3.00	3	0	3	0	0	0
.........................................................................................................................TTTTCCGCTTACTGGCGT.............................................................................................................................................................................................................................	18	1	3.00	3	0	3	0	0	0
..........................................................................................................................................................ACAGGAAAGGGAAAAAGGCGTAC.......................................................................................................................................................................................	23	1	2.00	2	0	1	1	0	0
....................................................................................................................TGTCTTTTTCCGCTTACTGGG...............................................................................................................................................................................................................................	21	1	2.00	2	1	1	0	0	0
.........................................................................................................................................................GACAGGAAAGGGAAAAAGGC...........................................................................................................................................................................................	20	1	2.00	2	0	0	2	0	0
.......................................................................................................................CTTTTTCCGCTTACTGGCGG.............................................................................................................................................................................................................................	20	1	2.00	2	0	2	0	0	0
..........................................................................................................................................................ACAGGAAAGGGAAAAAGGCGTT........................................................................................................................................................................................	22	1	2.00	2	0	0	0	2	0
...........................................................................................................................................................CAGGAAAGGGAAAAAGGCGT.........................................................................................................................................................................................	20	1	2.00	2	0	2	0	0	0
....................................................................................................................TGTCTTTTTCCGCTTACTGGCGAA............................................................................................................................................................................................................................	24	1	2.00	2	1	0	0	0	1
....................................................................................................................TGTCTTTTTCCGCTTACTGCGT..............................................................................................................................................................................................................................	22	1	1.00	1	0	1	0	0	0
....................................................................................................................TGTCTTTTTCCGCTTACTGGCGAG............................................................................................................................................................................................................................	24	1	1.00	1	0	1	0	0	0
.....................................................................................................................GTCTTTTTCCGCTTACTGGCT..............................................................................................................................................................................................................................	21	1	1.00	1	0	1	0	0	0
....................................................................................................................TGTCTTTTTCCGCTTACTGGCTG.............................................................................................................................................................................................................................	23	1	1.00	1	1	0	0	0	0
.....................................................................................................................GTCTTTTTCCGCTTACTGGT...............................................................................................................................................................................................................................	20	1	1.00	1	0	1	0	0	0
....................................................................................................................TGTCTTTTTCCGCTTACTGGCGGG............................................................................................................................................................................................................................	24	1	1.00	1	0	1	0	0	0
....................................................................................................................TGTCTTTTTCCGCTTACTGGCGTAAA..........................................................................................................................................................................................................................	26	1	1.00	1	0	0	0	1	0
.........................................................................................................................................................GACAGGAAAGGGAAAAAGG............................................................................................................................................................................................	19	1	1.00	1	0	1	0	0	0
.....................................................................................................................GTCTTTTTCCGCTTACTGT................................................................................................................................................................................................................................	19	1	1.00	1	0	1	0	0	0

droVir3

-TCT--ATATGA---------------AAGTATA-------------------CTTAACTTGATTGTATAT------------CT---T---TGATCTATAAAGTTCTAGTCGATTTGTCTTTTTCCGCTTACTGGCGTTTTATT-GAGCAACGACAGGAAAGGGAAAAAGGCGTATTTACTATGAATTTGTTCAACCAATC----------------TGT----------TTAAAC----ACCT--ATTCAATGAAAAGAAATGCTAATCATACAAATAGAGATCAACTGGTGAGTA--GC-------------------------------------------------------CCT	Size	Hit Count	Total Norm	Total	M027 Male-body	M028 Head	M047 Female-body	M061 Embryo	SRR060654 Ovary	SRR060655 Testis	SRR060656 Ovary	SRR060657 Testis	SRR060658 Ovary	SRR060659 Testis	SRR060660 Ovary	SRR060661 Embryo	SRR060662 Embryo	SRR060663 Embryo	SRR060664 Male-body	SRR060665 Female-body	SRR060666 Male-body	SRR060667 Female-body	SRR060668 Male-body	SRR060669 Female-body	SRR060670 Testis	SRR060671 Male-body	SRR060672 Female-body	SRR060673 Ovary	SRR060674 Ovary	SRR060675 Ovary	SRR060676 Ovary	SRR060677 Ovary	SRR060678 Testis	SRR060679 Testis	SRR060680 Testis	SRR060681 Testis	SRR060682 Embryo	SRR060683 Testis	SRR060684 Embryo	SRR060685 Embryo	SRR060686 Embryo	SRR060687 Embryo	SRR060688 Ovary	SRR060689 Testis	SRR1106712 embryo_0-2h	SRR1106713 embryo_0-2h	SRR1106714 embryo_2-4h	SRR1106715 embryo_4-6h	SRR1106716 embryo_4-6h	SRR1106717 embryo_6-8h	SRR1106718 embryo_6-8h	SRR1106719 embryo_8-10h	SRR1106720 embryo_8-10h	SRR1106721 embryo_10-12h	SRR1106722 embryo_10-12h	SRR1106723 embryo_12-14h	SRR1106724 embryo_12-14h	SRR1106725 embryo_14-16h	SRR1106726 embryo_14-16h	SRR1106727 larvae	SRR1106728 larvae	SRR1106729 mixed whole adult body	SRR1106730 embryo_16-30h	V047 Embryo	V053 Head	V116 Male-body	GSM1528803 follicle cells	SRR2096013 Ovary_Strain_9_oxidized	SRR2096014 Ovary_Strain_160_oxidized	SRR2096026 embryo_0-2h from 14 day old Strain 9 mothers	SRR2096038 embryo_0-2h from 14 day old Strain 9 mothers	SRR2096050 embryo_0-2h from 14 day old Strain 160 mothers	SRR2096055 Ovary_Min_43	SRR2096056 Ovary_Min_46	SRR2096057 Ovary_Min_50	SRR2096058 Ovary_Min_98	SRR2096059 Ovary_Min_164	SRR2096060 Ovary_Min_193	SRR2096061 embryo_0-2h from 14 day old Strain 160 mothers	SRR2096072 embryo_0-2h from 15to16 day old dysgenic mothers	SRR2096079 embryo_0-2h from 15to16 day old dysgenic mothers	SRR2096080 embryo_0-2h from 15to16 day old nondysgenic mothers	SRR2096081 embryo_0-2h from 15to16 day old nondysgenic mothers
....................................................................................................................TGTCTTTTTCCGCTTACTGGCG..............................................................................................................................................................................................................................	22	1	201418.00	201418	356	99	38449	2079	850	5775	2331	693	96	562	69	0	0	0	1233	1036	241	484	489	190	3585	536	675	1930	3152	3117	4825	3197	37174	28294	9394	30398	0	1974	7	0	0	16	767	5403	0	1	0	0	0	0	0	0	0	1	1	2	1	4	0	6	6	5	28	701	750	1445	0	697	1444	0	1	1	1398	1404	1034	637	1405	956	1	3	4	4	2
....................................................................................................................TGTCTTTTTCCGCTTACTGGCGT.............................................................................................................................................................................................................................	23	1	20563.00	20563	0	1	2299	366	274	1862	616	138	54	192	11	0	0	0	111	87	24	56	49	44	708	86	104	425	283	277	437	339	2962	2253	826	2755	0	517	2	0	0	4	163	1065	0	0	0	0	0	0	0	0	1	0	2	0	0	1	0	0	0	0	6	141	56	548	72	116	200	0	0	0	7	11	4	5	3	0	0	0	0	0	0
....................................................................................................................TGTCTTTTTCCGCTTACTGGC...............................................................................................................................................................................................................................	21	1	14667.00	14667	252	255	5357	446	8	49	7	16	0	7	2	0	0	0	35	21	8	17	9	4	23	5	13	32	97	108	118	75	792	712	255	635	0	20	0	0	0	0	7	41	0	1	1	0	0	0	0	0	0	0	0	1	0	1	3	5	5	15	23	11	52	49	1	17	287	1	0	0	966	1055	664	371	1008	699	0	2	0	1	2
....................................................................................................................TGTCTTTTTCCGCTTACTGG................................................................................................................................................................................................................................	20	1	8039.00	8039	70	36	5492	159	9	41	12	5	1	4	0	0	0	0	0	1	0	1	0	2	25	0	0	22	28	39	44	22	257	332	106	265	0	28	0	0	0	0	14	56	1	1	0	0	0	1	0	0	0	0	0	8	12	3	13	4	10	12	88	1	60	57	0	9	209	0	0	0	86	110	76	45	92	67	0	1	0	0	2
..........................................................................................................................................................ACAGGAAAGGGAAAAAGGCGTA........................................................................................................................................................................................	22	1	5426.00	5426	5	0	365	298	37	199	29	300	105	466	79	0	0	0	60	27	13	40	20	21	145	23	43	36	70	44	115	64	691	655	241	573	0	158	0	0	0	0	23	90	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	1	12	9	0	274	0	39	23	2	1	4	2	5	7	1	2	3	1	1	1	1	0
.....................................................................................................................GTCTTTTTCCGCTTACTGGCG..............................................................................................................................................................................................................................	21	1	3565.00	3565	0	0	3504	4	0	5	3	0	0	0	0	0	0	0	0	0	0	0	0	0	4	0	1	1	0	2	0	0	11	9	2	13	0	1	0	0	0	0	1	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................TGTCTTTTTCCGCTTACTG.................................................................................................................................................................................................................................	19	1	2319.00	2319	434	491	158	2	0	7	5	0	0	0	0	0	0	0	1	1	1	1	1	1	5	2	1	3	6	4	2	4	38	56	22	35	0	8	0	0	0	0	3	13	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	2	0	6	0	0	0	5	0	0	0	226	219	114	73	203	165	0	0	0	0	0
....................................................................................................................TGTCTTTTTCCGCTTACTGGCGTT............................................................................................................................................................................................................................	24	1	1181.00	1181	0	0	77	14	12	82	29	13	3	21	2	0	0	0	7	5	1	6	0	1	53	4	5	36	11	21	17	17	169	128	58	190	0	40	0	0	0	0	13	73	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	8	3	27	5	14	14	0	0	0	1	0	0	0	1	0	0	0	0	0	0
..........................................................................................................................................................ACAGGAAAGGGAAAAAGGCGT.........................................................................................................................................................................................	21	1	1129.00	1129	2	0	85	30	8	64	5	96	26	141	26	0	0	0	8	2	3	4	2	2	15	6	4	3	17	5	21	6	185	95	47	106	0	22	0	0	0	0	3	18	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	45	0	3	13	0	0	0	2	5	1	0	1	0	0	0	0	0	0
....................................................................................................................TGTCTTTTTCCGCTTACTGGCGA.............................................................................................................................................................................................................................	23	1	859.00	859	0	0	206	4	5	31	6	1	0	5	0	0	0	0	2	4	3	2	5	0	10	5	8	8	8	13	13	18	122	130	41	112	0	14	0	0	0	0	6	16	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	16	8	0	3	25	0	0	0	3	0	1	2	0	1	0	0	0	0	0
....................................................................................................................TGTCTTTTTCCGCTTACTGGCT..............................................................................................................................................................................................................................	22	1	751.00	751	7	11	164	2	5	39	24	1	1	5	1	0	0	0	3	0	0	1	0	0	58	1	4	22	13	5	16	10	71	64	32	69	0	32	0	0	0	0	10	29	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	16	8	13	0	1	10	0	0	0	1	0	2	0	0	0	0	0	0	0	0
....................................................................................................................TGTCTTTTTCCGCTTACTGGCA..............................................................................................................................................................................................................................	22	1	530.00	530	1	1	137	3	2	7	8	1	0	2	0	0	0	0	5	2	1	3	2	2	11	3	1	5	3	11	11	11	83	52	25	75	0	6	0	0	0	0	4	13	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	5	4	0	2	9	0	0	0	4	1	2	2	5	5	0	0	0	0	0
.......................................................................................................................CTTTTTCCGCTTACTGGCG..............................................................................................................................................................................................................................	19	1	529.00	529	1	0	421	9	0	2	4	0	0	0	0	0	0	0	1	0	0	3	2	0	10	0	1	4	3	3	3	1	19	18	5	11	0	0	0	0	0	0	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	2	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0
.....................................................................................................................GTCTTTTTCCGCTTACTGGC...............................................................................................................................................................................................................................	20	1	483.00	483	0	0	482	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................TGTCTTTTTCCGCTTACTGGCGTTT...........................................................................................................................................................................................................................	25	1	442.00	442	0	0	31	1	1	24	11	1	2	3	1	0	0	0	5	1	1	0	3	4	19	3	2	7	5	3	9	7	57	44	23	105	0	20	0	0	0	0	1	35	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	6	0	3	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................................TTTTTCCGCTTACTGGCG..............................................................................................................................................................................................................................	18	1	421.00	421	0	0	318	6	0	7	9	1	0	1	0	0	0	0	0	0	0	1	0	0	2	2	0	3	2	3	0	3	6	13	5	19	0	9	0	0	0	0	1	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	1	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0
.....................................................................................................................GTCTTTTTCCGCTTACTGG................................................................................................................................................................................................................................	19	1	402.00	402	0	0	399	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................TCTTTTTCCGCTTACTGGCG..............................................................................................................................................................................................................................	20	1	240.00	240	0	0	207	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	1	1	1	1	6	11	0	2	0	1	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................................................................GACAGGAAAGGGAAAAAGGCGTA........................................................................................................................................................................................	23	1	211.00	211	0	0	12	23	2	15	2	6	7	19	3	0	0	0	3	0	0	3	0	1	6	0	0	0	2	1	0	2	25	22	6	23	0	11	0	0	0	0	0	4	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	9	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................ACAGGAAAGGGAAAAAGGCGTAA.......................................................................................................................................................................................	23	1	205.00	205	0	0	13	1	0	7	0	4	1	7	1	0	0	0	4	3	0	0	2	1	5	0	0	1	5	4	7	2	19	41	13	31	0	11	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	14	0	1	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0
.....................................................................................................................GTCTTTTTCCGCTTACTGGCGT.............................................................................................................................................................................................................................	22	1	182.00	182	0	0	168	0	0	0	3	0	0	0	0	0	0	0	1	0	0	0	0	0	2	0	0	0	0	0	1	0	0	3	1	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................TGTCTTTTTCCGCTTACTGGCGC.............................................................................................................................................................................................................................	23	1	142.00	142	0	0	16	56	0	4	4	1	0	0	0	0	0	0	0	0	0	0	0	1	5	1	2	0	1	1	3	0	14	9	5	7	0	2	0	0	0	0	2	7	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................TGTCTTTTTCCGCTTACTGGCGTA............................................................................................................................................................................................................................	24	1	141.00	141	0	0	12	1	0	4	3	1	0	2	0	0	0	0	0	2	0	1	0	0	3	0	4	2	3	5	2	0	20	18	8	21	0	5	0	0	0	0	3	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	7	10	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................TGTCTTTTTCCGCTTACTGGT...............................................................................................................................................................................................................................	21	1	120.00	120	0	2	56	2	1	3	1	0	0	0	0	0	0	0	1	0	0	0	0	0	2	1	0	0	0	0	1	3	12	10	3	13	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	3	0	1	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0
....................................................................................................................TGTCTTTTTCCGCTTACT..................................................................................................................................................................................................................................	18	1	117.00	117	2	0	85	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	2	0	1	2	3	4	0	3	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	5	0	0	0	0	2	0	0	2	1	0	0	0	0	0
..........................................................................................................................................................ACAGGAAAGGGAAAAAGGCGTT........................................................................................................................................................................................	22	1	113.00	113	0	0	3	5	0	3	0	11	8	14	6	0	0	0	1	0	0	0	0	0	3	0	0	1	2	0	0	0	14	13	4	14	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	6	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................TTGTCTTTTTCCGCTTACTGGCG..............................................................................................................................................................................................................................	23	1	111.00	111	0	0	96	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	3	1	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................ACAGGAAAGGGAAAAAGGCG..........................................................................................................................................................................................	20	1	110.00	110	4	0	8	3	0	6	0	15	4	11	0	0	0	0	0	0	0	0	0	0	2	1	0	2	0	2	2	0	12	3	2	3	0	3	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	1	0	0	12	0	2	0	0	0	0	0	4	0	6	0	0	0	0	0	0	0
....................................................................................................................TGTCTTTTTCCGCTTACTGGA...............................................................................................................................................................................................................................	21	1	84.00	84	2	0	57	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	3	7	1	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	1	0	0	0	0	0	0	0	0	0	1	1	1	0	0	0	0	0
....................................................................................................................TGTCTTTTTCCGCTTACTGGCGTTA...........................................................................................................................................................................................................................	25	1	75.00	75	0	0	8	0	1	3	0	0	0	0	0	0	0	0	0	0	0	0	0	3	3	0	1	1	0	1	1	0	7	12	5	20	0	3	0	0	0	0	2	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................................................................GACAGGAAAGGGAAAAAGGCGT.........................................................................................................................................................................................	22	1	71.00	71	0	0	4	4	0	8	1	8	2	12	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	1	2	7	7	5	3	0	2	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................TGTCTTTTTCCGCTTACTGGCC..............................................................................................................................................................................................................................	22	1	69.00	69	1	0	5	25	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	12	0	0	1	2	0	0	0	6	2	1	3	0	1	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	4	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0
.......................................................................................................................CTTTTTCCGCTTACTGGC...............................................................................................................................................................................................................................	18	1	66.00	66	0	0	61	2	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................ACAGGAAAGGGAAAAAGGCGTAT.......................................................................................................................................................................................	23	1	65.00	65	0	0	3	2	0	1	0	0	0	2	0	0	0	0	0	0	0	1	0	0	0	0	0	0	1	1	2	1	9	9	5	20	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	4	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................ACAGGAAAGGGAAAAAGG............................................................................................................................................................................................	18	1	52.00	52	0	0	1	0	0	3	2	20	4	8	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	2	0	4	0	2	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................TGTCTTTTTCCGCTTACTGGCGG.............................................................................................................................................................................................................................	23	1	48.00	48	1	0	39	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	1	0	2	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................CAGGAAAGGGAAAAAGGCGTA........................................................................................................................................................................................	21	1	47.00	47	0	0	39	1	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................ACAGGAAAGGGAAAAAGGC...........................................................................................................................................................................................	19	1	46.00	46	0	0	1	7	0	4	0	3	1	4	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	1	5	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	12	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	1
........................................................................................................................TTTTTCCGCTTACTGGCGT.............................................................................................................................................................................................................................	19	1	41.00	41	0	0	27	0	0	2	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	2	2	1	2	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................TGTCTTTTTCCGCTTACTGGCGTTTT..........................................................................................................................................................................................................................	26	1	37.00	37	0	0	2	0	1	5	0	1	0	1	0	0	0	0	2	0	0	0	0	0	0	1	0	0	1	0	0	1	1	3	3	8	0	1	0	0	0	0	3	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................CTTTTTCCGCTTACTGGCGT.............................................................................................................................................................................................................................	20	1	34.00	34	0	0	15	3	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	6	2	1	1	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................TGTCTTTTTCCGCTTACTGGCGTTG...........................................................................................................................................................................................................................	25	1	33.00	33	0	0	5	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	2	0	1	2	2	3	4	0	5	0	2	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................TGTCTTTTTCCGCTTACTGGCGTG............................................................................................................................................................................................................................	24	1	28.00	28	0	0	7	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	1	0	0	1	0	5	4	2	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................TCTTTTTCCGCTTACTGG................................................................................................................................................................................................................................	18	1	27.00	27	0	0	27	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................GTCTTTTTCCGCTTACTGGCGA.............................................................................................................................................................................................................................	22	1	24.00	24	0	0	24	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................................TTTTCCGCTTACTGGCGT.............................................................................................................................................................................................................................	18	1	22.00	22	0	0	13	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	3	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................TCTTTTTCCGCTTACTGGC...............................................................................................................................................................................................................................	19	1	21.00	21	0	0	21	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................TGTCTTTTTCCGCTTACTGGG...............................................................................................................................................................................................................................	21	1	20.00	20	3	0	1	15	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................TTGTCTTTTTCCGCTTACTGGC...............................................................................................................................................................................................................................	22	1	20.00	20	0	0	16	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0
....................................................................................................................TGTCTTTTTCCGCTTACTGGCGTAA...........................................................................................................................................................................................................................	25	1	18.00	18	0	0	5	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	2	3	3	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................................................................GACAGGAAAGGGAAAAAGGCG..........................................................................................................................................................................................	21	1	18.00	18	0	0	0	1	0	2	0	3	2	3	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................TGTCTTTTTCCGCTTACTGT................................................................................................................................................................................................................................	20	1	17.00	17	1	2	3	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	2	0	0	0	1	1	1	1	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................TGTCTTTTTCCGCTTACTGGTT..............................................................................................................................................................................................................................	22	1	16.00	16	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	6	0	0	0	0	0	0	0	2	0	3	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................GTCTTTTTCCGCTTACTG.................................................................................................................................................................................................................................	18	1	15.00	15	0	0	15	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................TCTTTTTCCGCTTACTGGCGT.............................................................................................................................................................................................................................	21	1	15.00	15	0	0	9	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	3	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................TTGTCTTTTTCCGCTTACTGG................................................................................................................................................................................................................................	21	1	15.00	15	0	0	12	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	2	0	0	0	0	0
....................................................................................................................TGTCTTTTTCCGCTTACTGCG...............................................................................................................................................................................................................................	21	1	14.00	14	0	0	3	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	2	1	2	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................TGTCTTTTTCCGCTTACTGGCGAA............................................................................................................................................................................................................................	24	1	13.00	13	0	0	2	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	1	3	2	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................TGTCTTTTTCCGCTTACTGGAA..............................................................................................................................................................................................................................	22	1	12.00	12	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	0	0	0	0	0	0	0	3	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................GTCTTTTTCCGCTTACTGGCA..............................................................................................................................................................................................................................	21	1	12.00	12	0	0	12	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................GTCTTTTTCCGCTTACTGGCT..............................................................................................................................................................................................................................	21	1	12.00	12	0	0	11	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................................................AGGAAAGGGAAAAAGGCGTA........................................................................................................................................................................................	20	1	11.00	11	0	0	2	1	0	0	0	3	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................TCTTTTTCCGCTTACTGGCGTT............................................................................................................................................................................................................................	22	1	11.00	11	0	0	0	0	0	2	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	2	1	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................ACAGGAAAGGGAAAAAGGCGTAG.......................................................................................................................................................................................	23	1	11.00	11	0	0	2	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	3	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................TGTCTTTTTCCGCTTACTGGCGTC............................................................................................................................................................................................................................	24	1	10.00	10	0	0	0	2	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	1	0	1	2	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................TTTGTCTTTTTCCGCTTACTGGCG..............................................................................................................................................................................................................................	24	1	9.00	9	0	0	9	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................TGTCTTTTTCCGCTTACTGGAT..............................................................................................................................................................................................................................	22	1	8.00	8	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	7	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................GAAAGGGAAAAAGGCGTA........................................................................................................................................................................................	18	1	8.00	8	0	0	2	0	0	0	0	1	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................................................................GACAGGAAAGGGAAAAAGGC...........................................................................................................................................................................................	20	1	8.00	8	0	0	1	2	0	0	0	1	0	2	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................ACAGGAAAGGGAAAAAGGCGTC........................................................................................................................................................................................	22	1	8.00	8	0	0	0	1	0	2	1	1	0	0	2	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................TGTCTTTTTCCGCTTAC...................................................................................................................................................................................................................................	17	1	7.00	7	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	4	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................ACAGGAAAGGGAAAAAGGCGC.........................................................................................................................................................................................	21	1	7.00	7	0	0	0	5	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................................................................GACAGGAAAGGGAAAAAGG............................................................................................................................................................................................	19	1	7.00	7	0	0	1	0	0	0	0	1	0	2	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................TTGTCTTTTTCCGCTTACTGGCGT.............................................................................................................................................................................................................................	24	1	7.00	7	0	0	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................ACAGGAAAGGGAAAAAGGCGTAC.......................................................................................................................................................................................	23	1	7.00	7	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	2	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................................................................GACAGGAAAGGGAAAAAGGCGTAA.......................................................................................................................................................................................	24	1	6.00	6	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	2	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................TGTCTTTTTCCGCTTACTGGCAA.............................................................................................................................................................................................................................	23	1	6.00	6	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................ACAGGAAAGGGAAAAAGGCGTG........................................................................................................................................................................................	22	1	5.00	5	0	0	0	0	0	1	0	2	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................GTCTTTTTCCGCTTACTGGCGG.............................................................................................................................................................................................................................	22	1	5.00	5	0	0	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................TGTCTTTTTCCGCTTACTGC................................................................................................................................................................................................................................	20	1	5.00	5	0	0	1	2	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................................................................GACAGGAAAGGGAAAAAGGCGTT........................................................................................................................................................................................	23	1	5.00	5	0	0	0	0	1	0	0	1	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................GTCTTTTTCCGCTTACTGGT...............................................................................................................................................................................................................................	20	1	5.00	5	0	0	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

droMoj3

-ATC-----------TAACTGAAT---------------------------------------------------C-----------GATTTT--TATATAAAGTTCTAGTCGATTTGTCTTTTTCCGCTTACTGACGTTTTATT-GAACAACGGCAGGGAAGGGAAAAAGGCGTATTTACTATGAATTATTTCAACGATATAAA--------------------AATT-------------TCT--AT---------------------------------------------------------------------------------------------------T-------AAAA	Size	Hit Count	Total Norm	Total	M046 Female-body	V041 Embryo	V049 Head	V056 Head	M060 Embryo	V110 Male-body
....................................................................................................................TGTCTTTTTCCGCTTACTGACG..............................................................................................................................................................................................................................	22	1	168709.00	168709	149592	1659	591	684	15556	627
....................................................................................................................TGTCTTTTTCCGCTTACTGACGT.............................................................................................................................................................................................................................	23	1	30005.00	30005	13073	431	90	126	15247	1038
.....................................................................................................................GTCTTTTTCCGCTTACTGACG..............................................................................................................................................................................................................................	21	1	10284.00	10284	10239	0	0	0	44	1
....................................................................................................................TGTCTTTTTCCGCTTACTGAC...............................................................................................................................................................................................................................	21	1	6406.00	6406	5670	0	7	7	703	19
....................................................................................................................TGTCTTTTTCCGCTTACTGACGC.............................................................................................................................................................................................................................	23	1	2272.00	2272	34	0	0	1	2234	3
....................................................................................................................TGTCTTTTTCCGCTTACTGA................................................................................................................................................................................................................................	20	1	1945.00	1945	1727	1	8	15	186	8
..........................................................................................................................................................GCAGGGAAGGGAAAAAGGCGTA........................................................................................................................................................................................	22	1	1700.00	1700	179	23	1	1	1269	227
....................................................................................................................TGTCTTTTTCCGCTTACTGACGTT............................................................................................................................................................................................................................	24	1	1340.00	1340	682	29	5	7	542	75
.....................................................................................................................GTCTTTTTCCGCTTACTGACGT.............................................................................................................................................................................................................................	22	1	813.00	813	778	0	0	0	34	1
....................................................................................................................TGTCTTTTTCCGCTTACTGACT..............................................................................................................................................................................................................................	22	1	718.00	718	689	5	14	2	6	2
.........................................................................................................................................................GGCAGGGAAGGGAAAAAGGCGTA........................................................................................................................................................................................	23	1	637.00	637	16	9	0	0	572	40
.....................................................................................................................GTCTTTTTCCGCTTACTGAC...............................................................................................................................................................................................................................	20	1	459.00	459	455	0	0	0	4	0
......................................................................................................................TCTTTTTCCGCTTACTGACG..............................................................................................................................................................................................................................	20	1	444.00	444	429	0	1	0	13	1
..........................................................................................................................................................GCAGGGAAGGGAAAAAGGCGT.........................................................................................................................................................................................	21	1	399.00	399	219	1	1	1	67	110
........................................................................................................................TTTTTCCGCTTACTGACG..............................................................................................................................................................................................................................	18	1	381.00	381	262	1	0	0	118	0
....................................................................................................................TGTCTTTTTCCGCTTACTGACA..............................................................................................................................................................................................................................	22	1	370.00	370	348	4	2	3	12	1
.......................................................................................................................CTTTTTCCGCTTACTGACG..............................................................................................................................................................................................................................	19	1	348.00	348	292	2	0	1	53	0
....................................................................................................................TGTCTTTTTCCGCTTACTGACGTC............................................................................................................................................................................................................................	24	1	152.00	152	28	1	0	0	121	2
.....................................................................................................................GTCTTTTTCCGCTTACTGA................................................................................................................................................................................................................................	19	1	151.00	151	149	0	0	0	2	0
....................................................................................................................TGTCTTTTTCCGCTTACTGACGA.............................................................................................................................................................................................................................	23	1	149.00	149	139	1	0	1	8	0
....................................................................................................................TGTCTTTTTCCGCTTACTG.................................................................................................................................................................................................................................	19	1	142.00	142	137	0	1	0	3	1
...................................................................................................................TTGTCTTTTTCCGCTTACTGACG..............................................................................................................................................................................................................................	23	1	140.00	140	137	0	0	0	3	0
........................................................................................................................TTTTTCCGCTTACTGACGT.............................................................................................................................................................................................................................	19	1	86.00	86	14	1	0	0	69	2
....................................................................................................................TGTCTTTTTCCGCTTACTGACGG.............................................................................................................................................................................................................................	23	1	85.00	85	57	1	0	0	27	0
....................................................................................................................TGTCTTTTTCCGCTTACTGACC..............................................................................................................................................................................................................................	22	1	82.00	82	14	0	1	1	66	0
.......................................................................................................................CTTTTTCCGCTTACTGACGT.............................................................................................................................................................................................................................	20	1	71.00	71	28	0	0	0	41	2
....................................................................................................................TGTCTTTTTCCGCTTACT..................................................................................................................................................................................................................................	18	1	64.00	64	63	0	0	0	1	0
.........................................................................................................................TTTTCCGCTTACTGACGT.............................................................................................................................................................................................................................	18	1	55.00	55	23	0	0	0	32	0
....................................................................................................................TGTCTTTTTCCGCTTACTGACGTTT...........................................................................................................................................................................................................................	25	1	53.00	53	40	1	0	0	1	11
.....................................................................................................................GTCTTTTTCCGCTTACTGACT..............................................................................................................................................................................................................................	21	1	53.00	53	53	0	0	0	0	0
......................................................................................................................TCTTTTTCCGCTTACTGACGT.............................................................................................................................................................................................................................	21	1	47.00	47	36	0	1	0	9	1
.....................................................................................................................GTCTTTTTCCGCTTACTGACGTT............................................................................................................................................................................................................................	23	1	43.00	43	38	0	0	0	5	0
..........................................................................................................................................................GCAGGGAAGGGAAAAAGGCG..........................................................................................................................................................................................	20	1	33.00	33	10	0	0	0	13	10
....................................................................................................................TGTCTTTTTCCGCTTACTGAA...............................................................................................................................................................................................................................	21	1	32.00	32	32	0	0	0	0	0
....................................................................................................................TGTCTTTTTCCGCTTACTGACGTA............................................................................................................................................................................................................................	24	1	30.00	30	24	2	0	0	2	2
....................................................................................................................TGTCTTTTTCCGCTTACTGAT...............................................................................................................................................................................................................................	21	1	28.00	28	11	0	0	1	16	0
.....................................................................................................................GTCTTTTTCCGCTTACTGACA..............................................................................................................................................................................................................................	21	1	25.00	25	25	0	0	0	0	0
.......................................................................................................................CTTTTTCCGCTTACTGAC...............................................................................................................................................................................................................................	18	1	24.00	24	19	0	0	0	5	0
....................................................................................................................TGTCTTTTTCCGCTTACTGG................................................................................................................................................................................................................................	20	1	21.00	21	15	1	1	0	4	0
.........................................................................................................................................................GGCAGGGAAGGGAAAAAGGCGT.........................................................................................................................................................................................	22	1	20.00	20	3	0	0	0	15	2
...........................................................................................................................................................CAGGGAAGGGAAAAAGGCGTA........................................................................................................................................................................................	21	1	20.00	20	4	0	0	0	15	1
........................................................................................................................................................CGGCAGGGAAGGGAAAAAGGCGTA........................................................................................................................................................................................	24	1	19.00	19	1	0	0	0	18	0
..........................................................................................................................................................GCAGGGAAGGGAAAAAGGCGTAT.......................................................................................................................................................................................	23	1	17.00	17	4	0	0	0	4	9
..........................................................................................................................................................GCAGGGAAGGGAAAAAGGCGTAA.......................................................................................................................................................................................	23	1	16.00	16	5	0	0	0	5	6
...........................................................................................................................................................CAGGGAAGGGAAAAAGGCGT.........................................................................................................................................................................................	20	1	15.00	15	14	0	0	0	1	0
........................................................................................................................TTTTTCCGCTTACTGACGC.............................................................................................................................................................................................................................	19	1	14.00	14	0	0	0	0	14	0
...................................................................................................................TTGTCTTTTTCCGCTTACTGACGT.............................................................................................................................................................................................................................	24	1	13.00	13	10	0	0	0	3	0
..........................................................................................................................................................GCAGGGAAGGGAAAAAGGCGTT........................................................................................................................................................................................	22	1	13.00	13	3	0	0	0	7	3
....................................................................................................................TGTCTTTTTCCGCTTACTGACGTG............................................................................................................................................................................................................................	24	1	13.00	13	10	0	0	0	3	0
...................................................................................................................TTGTCTTTTTCCGCTTACTGAC...............................................................................................................................................................................................................................	22	1	12.00	12	10	0	0	0	2	0
.........................................................................................................................................................GGCAGGGAAGGGAAAAAGGCG..........................................................................................................................................................................................	21	1	11.00	11	1	0	0	0	5	5
..........................................................................................................................................................GCAGGGAAGGGAAAAAGGC...........................................................................................................................................................................................	19	1	11.00	11	2	0	0	0	3	6
.....................................................................................................................GTCTTTTTCCGCTTACTGACGC.............................................................................................................................................................................................................................	22	1	10.00	10	2	0	0	0	8	0
..........................................................................................................................................................GCAGGGAAGGGAAAAAGGCGC.........................................................................................................................................................................................	21	1	10.00	10	0	0	0	0	10	0
......................................................................................................................TCTTTTTCCGCTTACTGAC...............................................................................................................................................................................................................................	19	1	9.00	9	9	0	0	0	0	0
.........................................................................................................................TTTTCCGCTTACTGACGC.............................................................................................................................................................................................................................	18	1	9.00	9	0	0	0	0	9	0
........................................................................................................................TTTTTCCGCTTACTGACGTT............................................................................................................................................................................................................................	20	1	8.00	8	3	0	0	0	5	0
............................................................................................................................................................AGGGAAGGGAAAAAGGCGTA........................................................................................................................................................................................	20	1	8.00	8	2	0	0	0	6	0
.......................................................................................................................CTTTTTCCGCTTACTGACGC.............................................................................................................................................................................................................................	20	1	7.00	7	0	0	0	0	7	0
.........................................................................................................................................................GGCAGGGAAGGGAAAAAGGCGTAT.......................................................................................................................................................................................	24	1	7.00	7	0	0	0	0	6	1
..........................................................................................................................................................GCAGGGAAGGGAAAAAGGCGTC........................................................................................................................................................................................	22	1	7.00	7	0	0	0	0	7	0
....................................................................................................................TGTCTTTTTCCGCTTACTGAAA..............................................................................................................................................................................................................................	22	1	7.00	7	7	0	0	0	0	0
....................................................................................................................TGTCTTTTTCCGCTTACTGT................................................................................................................................................................................................................................	20	1	6.00	6	6	0	0	0	0	0
....................................................................................................................TGTCTTTTTCCGCTTACTGAG...............................................................................................................................................................................................................................	21	1	6.00	6	3	0	0	0	3	0
........................................................................................................................................................CGGCAGGGAAGGGAAAAAGGCGT.........................................................................................................................................................................................	23	1	6.00	6	1	0	0	0	5	0
....................................................................................................................TGTCTTTTTCCGCTTACTGACAC.............................................................................................................................................................................................................................	23	1	5.00	5	0	0	0	0	5	0

droGri2

-CCAGAGA--------------CT---A--------------AACATTTTGTGTATAA--GTATTGTA-------TGATTAAGC---AA-----TCTTCA-GAGTTCTAGTCGATTTGTCTTTTTCCGCTTACTGGCGTTTTATT-GAGCAACGACAGGAAAGGGAAAAAGGCGTATTTACTATGAATGTAATCAACAAACC--------------------------TATTCAAAT----ATCT--AT------------AAAGCT--------------AGAACAACTGGTGAGTA--ACCCTCTAT-----------------------------AC-C---TTTTATATTGCTTTT	Size	Hit Count	Total Norm	Total	M041 Female-body	V109 Male-body
....................................................................................................................TGTCTTTTTCCGCTTACTGGCG..............................................................................................................................................................................................................................	22	1	5550.00	5550	5369	181
.....................................................................................................................GTCTTTTTCCGCTTACTGGCG..............................................................................................................................................................................................................................	21	1	487.00	487	487	0
....................................................................................................................TGTCTTTTTCCGCTTACTGGCGT.............................................................................................................................................................................................................................	23	1	473.00	473	288	185
....................................................................................................................TGTCTTTTTCCGCTTACTGGC...............................................................................................................................................................................................................................	21	1	389.00	389	386	3
....................................................................................................................TGTCTTTTTCCGCTTACTGG................................................................................................................................................................................................................................	20	1	146.00	146	141	5
..........................................................................................................................................................ACAGGAAAGGGAAAAAGGCGTA........................................................................................................................................................................................	22	1	102.00	102	60	42
........................................................................................................................TTTTTCCGCTTACTGGCG..............................................................................................................................................................................................................................	18	1	40.00	40	40	0
.......................................................................................................................CTTTTTCCGCTTACTGGCG..............................................................................................................................................................................................................................	19	1	36.00	36	36	0
....................................................................................................................TGTCTTTTTCCGCTTACTGGCGTT............................................................................................................................................................................................................................	24	1	33.00	33	19	14
.....................................................................................................................GTCTTTTTCCGCTTACTGGC...............................................................................................................................................................................................................................	20	1	26.00	26	26	0
.....................................................................................................................GTCTTTTTCCGCTTACTGGCGT.............................................................................................................................................................................................................................	22	1	23.00	23	23	0
......................................................................................................................TCTTTTTCCGCTTACTGGCG..............................................................................................................................................................................................................................	20	1	19.00	19	19	0
....................................................................................................................TGTCTTTTTCCGCTTACT..................................................................................................................................................................................................................................	18	1	18.00	18	18	0
..........................................................................................................................................................ACAGGAAAGGGAAAAAGGCGT.........................................................................................................................................................................................	21	1	13.00	13	10	3
....................................................................................................................TGTCTTTTTCCGCTTACTGGCT..............................................................................................................................................................................................................................	22	1	10.00	10	9	1
.........................................................................................................................................................GACAGGAAAGGGAAAAAGGCGTA........................................................................................................................................................................................	23	1	9.00	9	7	2
.....................................................................................................................GTCTTTTTCCGCTTACTGG................................................................................................................................................................................................................................	19	1	8.00	8	8	0
....................................................................................................................TGTCTTTTTCCGCTTACTGGCGG.............................................................................................................................................................................................................................	23	1	8.00	8	5	3
....................................................................................................................TGTCTTTTTCCGCTTACTGGCGA.............................................................................................................................................................................................................................	23	1	7.00	7	5	2
...................................................................................................................TTGTCTTTTTCCGCTTACTGGCG..............................................................................................................................................................................................................................	23	1	7.00	7	7	0
.......................................................................................................................CTTTTTCCGCTTACTGGC...............................................................................................................................................................................................................................	18	1	7.00	7	7	0
....................................................................................................................TGTCTTTTTCCGCTTACTGGCGC.............................................................................................................................................................................................................................	23	1	7.00	7	4	3
....................................................................................................................TGTCTTTTTCCGCTTACTG.................................................................................................................................................................................................................................	19	1	6.00	6	6	0
...........................................................................................................................................................CAGGAAAGGGAAAAAGGCGTA........................................................................................................................................................................................	21	1	6.00	6	6	0
....................................................................................................................TGTCTTTTTCCGCTTACTGGCA..............................................................................................................................................................................................................................	22	1	5.00	5	5	0
....................................................................................................................TGTCTTTTTCCGCTTACTGGCGTTT...........................................................................................................................................................................................................................	25	1	4.00	4	2	2
..........................................................................................................................................................ACAGGAAAGGGAAAAAGGCG..........................................................................................................................................................................................	20	1	3.00	3	2	1
..........................................................................................................................................................ACAGGAAAGGGAAAAAGGCGTAA.......................................................................................................................................................................................	23	1	3.00	3	2	1
...........................................................................................................................................................CAGGAAAGGGAAAAAGGCGT.........................................................................................................................................................................................	20	1	3.00	3	3	0
..........................................................................................................................................................ACAGGAAAGGGAAAAAGGCGTT........................................................................................................................................................................................	22	1	3.00	3	2	1
......................................................................................................................TCTTTTTCCGCTTACTGGCGT.............................................................................................................................................................................................................................	21	1	3.00	3	3	0
....................................................................................................................TGTCTTTTTCCGCTTACTGGCGTA............................................................................................................................................................................................................................	24	1	3.00	3	2	1
.....................................................................................................................GTCTTTTTCCGCTTACTGGCT..............................................................................................................................................................................................................................	21	1	2.00	2	2	0
.......................................................................................................................CTTTTTCCGCTTACTGGCGT.............................................................................................................................................................................................................................	20	1	2.00	2	2	0
....................................................................................................................TGTCTTTTTCCGCTTACTGGCGTC............................................................................................................................................................................................................................	24	1	2.00	2	1	1
......................................................................................................................TCTTTTTCCGCTTACTGGC...............................................................................................................................................................................................................................	19	1	2.00	2	2	0
.....................................................................................................................GTCTTTTTCCGCTTACTGGCGG.............................................................................................................................................................................................................................	22	1	2.00	2	2	0
............................................................................................................................................................AGGAAAGGGAAAAAGGCGTA........................................................................................................................................................................................	20	1	1.00	1	1	0
...........................................................................................................................................................CAGGAAAGGGAAAAAGGCG..........................................................................................................................................................................................	19	1	1.00	1	1	0
....................................................................................................................TGTCTTTTTCCGCTTACTGGCGCC............................................................................................................................................................................................................................	24	1	1.00	1	1	0
.........................................................................................................................TTTTCCGCTTACTGGCGT.............................................................................................................................................................................................................................	18	1	1.00	1	1	0
....................................................................................................................TGTCTTTTTCCGCTTACTGC................................................................................................................................................................................................................................	20	1	1.00	1	1	0
.......................................................................................................................CTTTTTCCGCTTACTGGCGA.............................................................................................................................................................................................................................	20	1	1.00	1	1	0
..........................................................................................................................................................ACAGGAAAGGGAAAAAGGCGTAAG......................................................................................................................................................................................	24	1	1.00	1	1	0
..........................................................................................................................................................ACAGGAAAGGGAAAAAGGCGTAT.......................................................................................................................................................................................	23	1	1.00	1	1	0
....................................................................................................................TGTCTTTTTCCGCTTACTGCG...............................................................................................................................................................................................................................	21	1	1.00	1	1	0
..........................................................................................................................................................ACAGGAAAGGGAAAAAGGCGTTG.......................................................................................................................................................................................	23	1	1.00	1	1	0
....................................................................................................................TGTCTTTTTCCGCTTACTGGA...............................................................................................................................................................................................................................	21	1	1.00	1	1	0
.......................................................................................................................CTTTTTCCGCTTACTGGCGTT............................................................................................................................................................................................................................	21	1	1.00	1	1	0
.........................................................................................................................................................GACAGGAAAGGGAAAAAGGCGTT........................................................................................................................................................................................	23	1	1.00	1	0	1
...................................................................................................................TTGTCTTTTTCCGCTTACTGGC...............................................................................................................................................................................................................................	22	1	1.00	1	1	0
........................................................................................................................TTTTTCCGCTTACTGGCGT.............................................................................................................................................................................................................................	19	1	1.00	1	1	0
.........................................................................................................................................................GACAGGAAAGGGAAAAAGGCGT.........................................................................................................................................................................................	22	1	1.00	1	1	0
....................................................................................................................TGTCTTTTTCCGCTTACTGGCGGA............................................................................................................................................................................................................................	24	1	1.00	1	1	0
..............................................................................................................................................................GAAAGGGAAAAAGGCGTAA.......................................................................................................................................................................................	19	1	1.00	1	1	0
....................................................................................................................TGTCTTTTTCCGCTTACTGGCC..............................................................................................................................................................................................................................	22	1	1.00	1	1	0
....................................................................................................................TGTCTTTTTCCGCTTACTGGCGAAG...........................................................................................................................................................................................................................	25	1	1.00	1	1	0
.......................................................................................................................CTTTTTCCGCTTACTGGCGG.............................................................................................................................................................................................................................	20	1	1.00	1	1	0

dan-mir-316

scaffold_13337:3985755-3985843 -

Known

Unknown

3pUTR

Predicted structure

Flybase annnotation

Sense Strand Reads

Anti-sense strand reads

Re-alignment of all predicted orthologs

Re-alignment of all predicted orthologs with sRNA reads

-28.8	-28.5